BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009233
         (539 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9MBA1|CAO_ARATH Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=CAO PE=1 SV=1
          Length = 536

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/532 (76%), Positives = 466/532 (87%), Gaps = 2/532 (0%)

Query: 2   TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
            A+ + +ALSLPIS    R + ++ KK V+G FRVFA+FG+E GLV+KKS W  LFDVED
Sbjct: 3   AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62

Query: 60  PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
           PRSK P  KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63  PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122

Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
           IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL  R  +  D+  
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182

Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
           +S + S   LD  K     KSLNVSGPV PY+  LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242

Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
           +PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302

Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
             VKIKSLPC EQEGMIWIWPGDEPP   +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362

Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422

Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
           PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482

Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
           VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G  +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534


>sp|Q8S7E1|CAO_ORYSJ Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp.
           japonica GN=CAO PE=2 SV=1
          Length = 541

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/534 (76%), Positives = 464/534 (86%), Gaps = 7/534 (1%)

Query: 4   IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
           + T A+LSL P  L +P+ +  ++K V   GG +V+A+ G++G    K +AW  LF V+D
Sbjct: 1   MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60

Query: 60  PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
           P  +VP  KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61  PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120

Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
           IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD  +S +   C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180

Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC 237
            S  PSTS  S  +V  K PR+SLNVSGPVQPYN  LKNFW+PVAFS+DLKDDTMVP DC
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239

Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
           FEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299

Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
           ++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359

Query: 358 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
           NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419

Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
           SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA  +KHVPFM  LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479

Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
           E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRLWRDA+E+G  +LPF
Sbjct: 480 EKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 533


>sp|Q9ZWM5|CAO_CHLRE Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas
           reinhardtii GN=CAO PE=2 SV=2
          Length = 645

 Score =  426 bits (1094), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/488 (43%), Positives = 293/488 (60%), Gaps = 55/488 (11%)

Query: 89  DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
           ++  RQD    + + E    KV E L+  AR+  ++G ++ +L  L+  +AQA  ++ ++
Sbjct: 125 EYVTRQDAAATLAMIEEANRKVEESLSEEAREKTAVGDLRDQLESLRAQVAQAQERLAMT 184

Query: 145 EARVATALDKLAYM--EALVNDRLLQDRHTSGTDQTCASPST------------------ 184
           ++RV   L ++  +  EA   +R+ +       ++   + ST                  
Sbjct: 185 QSRVEQNLQRVNELKAEATTLERMRKASDLDIKERERIAISTVAAKGPASSSSSAAAVSA 244

Query: 185 ---------SKQSLDIVKGKLPRKSLNVSGPVQPYNTR------------------LKNF 217
                     + +   V  ++P  S        P  ++                  L+NF
Sbjct: 245 PATSATLTVERPAATTVTQEVPSTSYGTPVDRAPRRSKAAIRRSRGLESSMEIEEGLRNF 304

Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
           W+P  FS  L  DT+VPF+ F EPWV+FR + G P C+++ CAHR CPL LG V EG++ 
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364

Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PP 335
           CPYHGWE++ DG C KMPST   RNV + +LPC E++G IW+WPGD  P  T+P    PP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDFAQPP 424

Query: 336 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 395
            GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP  VKF      L G+
Sbjct: 425 EGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKALSGF 483

Query: 396 WDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 454
           WDPYPIDM F+PPCM LSTIG+++PGK + G    QC  HLHQLHVC+PS +  TRLLYR
Sbjct: 484 WDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYR 543

Query: 455 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 514
           MSLDF   ++HVPF+  +W+  A QVL EDL LVLGQQ+RM  G + W+ P  YDKL VR
Sbjct: 544 MSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDKLAVR 603

Query: 515 YRLWRDAL 522
           YR WR+ +
Sbjct: 604 YRRWRNGV 611


>sp|Q9XJ38|CAO_DUNSA Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina
           GN=CAO PE=2 SV=1
          Length = 463

 Score =  381 bits (979), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/445 (45%), Positives = 269/445 (60%), Gaps = 44/445 (9%)

Query: 123 MKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEA----LVNDRL------------ 166
           M+ +L  LQ+++++A  ++  SEARVA  L ++  ++A    L   RL            
Sbjct: 1   MQSKLLGLQDEISEARDKLRTSEARVAQNLKRVDELKAEAASLERMRLASSSSTDSTVSI 60

Query: 167 ----------------------LQDR-HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNV 203
                                 +Q R   SG   T       + S  + +G  P+ S  +
Sbjct: 61  ASRGGAAVAATTSVPDHVEREGIQSRVRGSGMASTSYPSHVPQPSQAVRRGPKPKDSRRL 120

Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
              ++     L+NFW+P  F+  L+   MVPFD F  PWV+FR +   P C++++CAHRA
Sbjct: 121 RSSLE-LEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRA 179

Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD 322
           CPL LG V  G +QCPYHGWE+   G C KMPST++   V + +LPC E++G +W+WPGD
Sbjct: 180 CPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGD 239

Query: 323 EPPTATIPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
            PP    P    PP+G+++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P 
Sbjct: 240 GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPIPE 299

Query: 382 LVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHV 440
            V+F      L G WDPYPI M F PPC+ LSTIG+S+PGK + G    +C  HLHQLHV
Sbjct: 300 AVRFHA-TKMLAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHV 358

Query: 441 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 500
           C+PS    TRLLYRMSLDF    KHVPF+  LW+  A QVL EDL LVLGQQ RM  G +
Sbjct: 359 CMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIGGDD 418

Query: 501 VWNLPVGYDKLGVRYRLWRDALEKG 525
            W  P+ YDKL VRYR WR+ +  G
Sbjct: 419 TWCTPMPYDKLAVRYRRWRNMVADG 443


>sp|Q9SK50|TIC55_ARATH Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=2
           SV=1
          Length = 539

 Score =  110 bits (275), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 39/334 (11%)

Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
           W+P+  + ++ +D  +    ++   V+++  +G   C ++ C HR   L  G + +GR++
Sbjct: 88  WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147

Query: 278 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
           C YHGW++  +GKC K+P    S ++ +   +K+    + +G++W+W   + P    P  
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205

Query: 333 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
           LP       P  F+I      ELP +H +LL+NL+D AH P +H  T   AK      LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263

Query: 384 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
             +T  S  G  G W            + F  PC++ +        + EG++  +   + 
Sbjct: 264 FEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDGVK--NYF 315

Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 494
             L +C P+ + K+ L+ R  +   S L  V   Q+ W   A +V  +D+  +  Q E  
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374

Query: 495 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 525
           M       +L +     D     YR W D +  G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408


>sp|O49931|TIC55_PEA Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1
          Length = 553

 Score =  108 bits (271), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 36/332 (10%)

Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
           W+P+  + ++  D  +    +++  V+FR  +    C ++ C HR   L  G + +GR++
Sbjct: 103 WYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLE 162

Query: 278 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 330
           C YHGW++  +GKC K+P         ++  +K+    + +G++W+W   + P   + IP
Sbjct: 163 CLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIP 222

Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
                   GF+       ELP +H +LL+NL+D AH P +H  T   AK     +L   +
Sbjct: 223 WFENFARPGFQ-DISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEV 281

Query: 387 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 438
           T  +  G  G+W        P  + F  PC++ +   I  K G++          H   L
Sbjct: 282 TERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKNGEI---------NHFSGL 332

Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 493
            +C P+ + K+ L+ R      S L  + F ++ +   A +V  +D+  +  Q     +E
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKL-FPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391

Query: 494 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
           ++       NL    D     YR W D +  G
Sbjct: 392 KVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 422


>sp|P12609|VANA_PSES9 Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp.
           (strain ATCC 19151) GN=vanA PE=3 SV=1
          Length = 329

 Score = 92.0 bits (227), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 39/254 (15%)

Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
           E  VI+RG       +++ C HR  PL LGS+ +G++ C YHG     DG+   MP+ ++
Sbjct: 5   ERMVIYRGAGQRVAALEDFCPHRGAPLSLGSIQDGKLVCGYHGLVMDCDGRTASMPAQRV 64

Query: 300 RNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHG 353
           +    I++ P  E+ G IW+WPGD       P L+P   +       +   +  +  ++ 
Sbjct: 65  QAFPCIRAFPAQERHGFIWVWPGDA--ALADPALIPHLEWAENPAWAYGGGLYHIACDYR 122

Query: 354 LLLDNLLDLAHAPFTHTST------------------------FAKGWSVPSLVKFLTPA 389
           L++DNL+DL H  + H S+                        F +G   P   +     
Sbjct: 123 LMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEGDRLITGRFMEGILAPPFWRAALRG 182

Query: 390 SGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 445
           +GL    D  P+D      F PP  VL  +G++  G+        C      +    P +
Sbjct: 183 NGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAGRGGYDAPADCKASSIVVDFITPET 239

Query: 446 RKKTRLLYRMSLDF 459
                  + M+  F
Sbjct: 240 DTSIWYFWGMARSF 253


>sp|O05616|VANA_PSEUH Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp.
           (strain HR199 / DSM 7063) GN=vanA PE=3 SV=1
          Length = 354

 Score = 91.3 bits (225), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 34/239 (14%)

Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
           KN W+ VA + D   D  +      E  V +RG +G    V++ C HR  PL LG V +G
Sbjct: 4   KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDG 62

Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
           ++ C YHG E   +GK   MP  +++    IKS    E+ G IW+WPGD       P L+
Sbjct: 63  KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALI 120

Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 384
               +  + E      +  +  ++ L++DNL+DL H  + H S+  +     + V     
Sbjct: 121 HHLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVE 180

Query: 385 -----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
                            F   A    G  D  P+D      F PP  VL  +G++  GK
Sbjct: 181 GDTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239


>sp|P94679|TSAM1_COMTE Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1
           OS=Comamonas testosteroni GN=tsaM1 PE=1 SV=1
          Length = 347

 Score = 82.0 bits (201), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
           ++N W+  A+ T++  + +       EP +++R   G    ++N C HR+ PLH+G    
Sbjct: 3   IRNCWYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEG 62

Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
             ++C YHG +++  G C ++P  +    K  IKS P  E+  ++WIW GD  P    P 
Sbjct: 63  DCVRCLYHGLKFNPSGACVEIPGQEQIPPKTCIKSYPVVERNRLVWIWMGD--PARANPD 120

Query: 332 LLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTSTFA 374
            +    +    E  M+         + L++DNLLD  H  + H +T  
Sbjct: 121 DIVDYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTTLG 168


>sp|Q44256|CBAA_COMTE 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit OS=Comamonas
           testosteroni GN=cbaA PE=3 SV=1
          Length = 432

 Score = 80.5 bits (197), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 13/177 (7%)

Query: 205 GPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
           G   P    ++ +W P   ST+L+   + V      E  V FR   G  G + + C HR 
Sbjct: 14  GRGTPMGGLMREYWIPALKSTELEAGGSPVRLLLLGEKLVAFREPSGAVGVMDSRCPHRG 73

Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST----QLRN-VKIKSLPCFEQEGMIWI 318
             L +G V EG ++C YHGW++S +GKC  MPS     + +N V++   P  E  G++W+
Sbjct: 74  VSLFMGRVEEGGLRCVYHGWKFSAEGKCVDMPSVRPEDEFKNSVRVARYPVKEMAGVVWV 133

Query: 319 WPGDEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
           + G       +P L    LP +  ++   I ++        L+  +D +H  F H  
Sbjct: 134 YMGTRKVLPELPRLEVLNLPENEVDV---ICLQRKSNWLQNLEGEIDTSHFNFLHVG 187


>sp|Q9AHG3|TSAM2_COMTE Putative toluene-4-sulfonate monooxygenase system iron-sulfur
           subunit TsaM2 OS=Comamonas testosteroni GN=tsaM2 PE=5
           SV=1
          Length = 346

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 22/174 (12%)

Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
           +KN W+    +TD     +       E  V+FR  DG    +++ C HR  PL LG V +
Sbjct: 3   VKNTWYVAGMATDCSRKPLA-RTFLNEKVVLFRTHDGHAVALEDRCCHRLAPLSLGDVED 61

Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 328
             I+C YHG  ++  G C ++P  +     + ++  P  E+ G++WIW GD P  A    
Sbjct: 62  AGIRCRYHGMVFNASGACVEIPGQEQIPPGMCVRRFPLVERHGLLWIWMGD-PARANPDD 120

Query: 329 --------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
                    P     SG+ IH +        + L++DNLLD  H  + H +T  
Sbjct: 121 IVDELWNGAPEWRTDSGY-IHYQ------ANYQLIVDNLLDFTHLAWVHPTTLG 167


>sp|Q8W496|PTC52_ARATH Protochlorophyllide-dependent translocon component 52,
           chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1
          Length = 559

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 148/394 (37%), Gaps = 91/394 (23%)

Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
           W+PV    DL             D +V +D  E+ W +          + +TC HR  PL
Sbjct: 85  WYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKV----------MDDTCPHRLAPL 134

Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 317
             G +++ GR+QC YHGW ++  G C+ +P            +   +   P   Q  +IW
Sbjct: 135 SDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIW 194

Query: 318 IWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
            WP  +P             IP L  PS  ++      ++P  + +L++NL+D AH P+ 
Sbjct: 195 FWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN--RDIPYGYDVLVENLMDPAHVPYA 252

Query: 369 HTSTF----AKGWSVPSLVK-FLTPASGLQGYW---------DPYPIDME---------- 404
           H         KG  +  +      P + LQ             P  I+++          
Sbjct: 253 HYGLMRFPKPKGKYIICISNSCFNPFTNLQILLAEKIDREGGKPLEINVKKLDNKGFFSK 312

Query: 405 -------FRPPCMVLSTIGI------SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRL 451
                  F  PC+  S+           P              L  + +C+P S  ++RL
Sbjct: 313 QEWGYSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRL 372

Query: 452 LYRMSLDFASVL-KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-MNNGANVWN----LP 505
           ++    +F   + K VP  ++++      +L+ DL L+  ++ + +  G   W     +P
Sbjct: 373 IWTFPRNFGVFIDKIVP--RWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIP 430

Query: 506 VGYDKLGVRYRLWRDALEKG-----AKQLPFMKP 534
              D   V +R W +   +       K  PF+ P
Sbjct: 431 TKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLP 464


>sp|Q52185|POBA_PSEPS Phenoxybenzoate dioxygenase subunit alpha OS=Pseudomonas
           pseudoalcaligenes GN=pobA PE=2 SV=1
          Length = 409

 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 25/220 (11%)

Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
           P   L+      P    L+ +W PVA S D+ D   +      E  V+FR K G PG + 
Sbjct: 24  PDPQLSAVAKGTPTGEYLRRYWQPVALSADVTDRPQM-VRILGEDLVLFRDKAGRPGLLY 82

Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS-----LPCFE 311
             C HR   L+ G V E  I+C YHGW ++ DG C   P      ++ ++      P  E
Sbjct: 83  PRCMHRGTSLYYGHVEEAGIRCCYHGWLFAVDGTCLNQPCEPEGGLRREAARQPWYPVEE 142

Query: 312 QEGMIWIWPGDEPPTATIP-------------CLLPPSGFEIHAEIVMELPIEHGLL--L 356
           + G+++ + G       +P               +   GF  +A+ V +  + +  L   
Sbjct: 143 RYGLVFAYMGPPEKKPVLPRYDILEDLEEGEFIEVISGGFVSYADHVEDPNVPYHWLQNW 202

Query: 357 DNLLDLAHAPFTHTS----TFAKGWSVPSLVKFLTPASGL 392
           +N++D  H    H++     FA+ + +   V F     G+
Sbjct: 203 ENIMDPYHVYILHSTFSGIQFAENFKILPRVDFEAVDGGV 242


>sp|Q9FYC2|PAO_ARATH Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=PAO PE=1 SV=1
          Length = 537

 Score = 69.7 bits (169), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 41/314 (13%)

Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVI-FRGKDGIPGCVQNTCAHRACPLHLGSV 271
           + ++ W+PV+   DL  +   PF       V+ F   D       + C HR  PL  G +
Sbjct: 83  KWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRL 142

Query: 272 NE-GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVK------IKSLPCFEQEGMIWIW 319
           +E G +QC YHGW +   G C ++P       + R VK      IK  P    +G++++W
Sbjct: 143 DENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIK-FPTMVSQGLLFVW 201

Query: 320 PGD---------EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH- 369
           P +         EPP   +P       F     I  +L   +  L++N+ D +H  F H 
Sbjct: 202 PDENGWDRANSIEPP--RLPDDFDKPEFST-VTIQRDLFYGYDTLMENVSDPSHIDFAHH 258

Query: 370 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQ 426
             T    +   +P  V+   P  G QG  D  P I  +F  PC  ++ I +    KL   
Sbjct: 259 KVTGRRDRAKPLPFKVESSGPW-GFQGANDDSPRITAKFVAPCYSMNKIELD--AKLPIV 315

Query: 427 NTRQCATHLHQLHVCLPSSRKKT-----RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
             ++    +   ++ +   + ++     R  ++ S+   +  + VP     + H+   ++
Sbjct: 316 GNQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVP---RWYEHWTSNLV 372

Query: 482 NEDLRLVLGQQERM 495
            +   +VL  QE++
Sbjct: 373 YDGDMIVLQGQEKV 386


>sp|Q05183|PHT3_PSEPU Phthalate 4,5-dioxygenase oxygenase subunit OS=Pseudomonas putida
           GN=pht3 PE=2 SV=1
          Length = 439

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 209 PYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
           P    ++  W PV    ++   D T V    F E  V+FR  DG  G +   C HR   L
Sbjct: 18  PMGQMMRRHWTPVCLLEEVSEPDGTPVRARLFGEDLVVFRDTDGRVGVMDEYCPHRRVSL 77

Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKM-----PSTQLRNVKIKSLPCFEQEGMIWIWPG 321
             G      ++C YHGW+   DG   +M      S   + VK  +    E  G +W + G
Sbjct: 78  IYGRNENSGLRCLYHGWKMDVDGNVVEMVSEPAASNMCQKVKHTAYKTREWGGFVWAYMG 137

Query: 322 DEPPTATIPCLLPPS 336
              P   IP  +PP+
Sbjct: 138 ---PQDAIPEFVPPA 149


>sp|D5IGG0|CARAA_SPHSX Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa
           OS=Sphingomonas sp. GN=carAa PE=1 SV=1
          Length = 378

 Score = 60.8 bits (146), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 16/175 (9%)

Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL--HLGSV 271
            +N W+PV  ++++ + T VP     E  ++     G    +Q+ C HR   L   +   
Sbjct: 25  FRNHWYPVRLASEIAEGTPVPVKLLGEK-ILLNRVGGKVYAIQDRCLHRGVTLSDRVECY 83

Query: 272 NEGRIQCPYHGWEYS-TDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
           ++  I C YHGW Y   DG+   +     S Q+    +K+ P  E +G+I+++ GD  PT
Sbjct: 84  SKNTISCWYHGWTYRWDDGRLVDILTNPGSVQIGRRALKTFPVEEAKGLIFVYVGDGEPT 143

Query: 327 ATIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
             I  +  P GF      IH +  + +     L  +N  D  H      S   KG
Sbjct: 144 PLIEDV--PPGFLDENRAIHGQHRL-VASNWRLGAENGFDAGHVLIHKNSILVKG 195


>sp|Q17938|DAF36_CAEEL Cholesterol desaturase daf-36 OS=Caenorhabditis elegans GN=daf-36
           PE=1 SV=2
          Length = 428

 Score = 57.0 bits (136), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 13/194 (6%)

Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS--VNE 273
           N W+ V  S  L ++ ++      +   + R + G      + C H     ++G   V +
Sbjct: 79  NGWYCVCESEKLANNQIMEITVLGQFLSLIRSESGAVYITDSYCPHIGANFNIGGRVVRD 138

Query: 274 GRIQCPYHGWEYSTD-GKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIW---PGDEPPT 326
             IQCP+HGW +S + GKC ++P  + R     K+ + PC E+   I++W    G EP  
Sbjct: 139 NCIQCPFHGWIFSAETGKCVEVPYDEGRIPEQAKVTTWPCIERNNNIYLWYHCDGAEPEW 198

Query: 327 ATIPCLLPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
                     GF  +      E+      + +N  D+AH  + H S     KG  +    
Sbjct: 199 EIPEITEITDGFWHLGGRTEHEVMCHIQEIPENGADIAHLNYLHKSAPPVTKGSDIIK-T 257

Query: 384 KFLTPASGLQGYWD 397
               P   +Q  WD
Sbjct: 258 DLSDPQPAVQHVWD 271


>sp|P71875|KSHA_MYCTU 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit
           OS=Mycobacterium tuberculosis GN=kshA PE=1 SV=2
          Length = 386

 Score = 53.5 bits (127), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 9/167 (5%)

Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
           TR    W  +  + D  +      + F    V+F    G    +   C H    L  G+V
Sbjct: 20  TRYARGWHCLGVAKDYLEGKPHGVEAFGTKLVVFADSHGDLKVLDGYCRHMGGDLSEGTV 79

Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIW---PGDEP-P 325
               + CP+H W +  DG+C+ +P  +   R  + +S     + G++++W    G+ P P
Sbjct: 80  KGDEVACPFHDWRWGGDGRCKLVPYARRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDP 139

Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGL---LLDNLLDLAHAPFTH 369
              IP +   +  E        + IE      ++DN+ D+AH  + H
Sbjct: 140 AVRIPEIPEAASDEWTDWRWNRILIEGSNCRDIIDNVTDMAHFFYIH 186


>sp|Q8G8B6|CARAA_PSERE Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa
           OS=Pseudomonas resinovorans GN=carAa PE=1 SV=1
          Length = 384

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%)

Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG--SV 271
            +N W+PV FS ++ +          E  ++ R  DG   C+++ C HR   L +     
Sbjct: 25  FRNHWYPVMFSKEIDEGEPKTLKLLGENLLVNR-IDGKLYCLKDRCLHRGVQLSVKVECK 83

Query: 272 NEGRIQCPYHGWEYS-TDGK-CEKM---PSTQLRNVKIKSLPCFEQEGMIWIW--PGDEP 324
            +  I C YH W Y   DG  C+ +    S Q+   K+K+ P  E +G ++I+   GD P
Sbjct: 84  TKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQKLKTYPVQEAKGCVFIYLGDGDPP 143

Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHG---LLLDNLLDLAHAPFTHTSTFAK 375
           P A      PP+  +   EI+ +  I      L ++N  D +H      S   K
Sbjct: 144 PLARD---TPPNFLDDDMEILGKNQIIKSNWRLAVENGFDPSHIYIHKDSILVK 194


>sp|P0ABR7|YEAW_ECOLI Putative dioxygenase subunit alpha YeaW OS=Escherichia coli (strain
           K12) GN=yeaW PE=3 SV=1
          Length = 374

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 28/175 (16%)

Query: 218 WFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR- 275
           W  VA S++L + +  V  +   E  V+ RG+D +     N C HR   L  G   EG+ 
Sbjct: 47  WICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSG---EGKA 103

Query: 276 ---IQCPYHGWEYSTDG------KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
              I CPYH W +  DG       CE + +      ++  +   E  G ++I    +P  
Sbjct: 104 KNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFI--NMDPNA 161

Query: 327 ATIPCLLPPSGF-------EIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 369
            ++   LP  G        E+H     A      P     ++DN L+  H    H
Sbjct: 162 TSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAH 216


>sp|P0ABR8|YEAW_ECO57 Putative dioxygenase subunit alpha YeaW OS=Escherichia coli O157:H7
           GN=yeaW PE=3 SV=1
          Length = 374

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 28/175 (16%)

Query: 218 WFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR- 275
           W  VA S++L + +  V  +   E  V+ RG+D +     N C HR   L  G   EG+ 
Sbjct: 47  WICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSG---EGKA 103

Query: 276 ---IQCPYHGWEYSTDG------KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
              I CPYH W +  DG       CE + +      ++  +   E  G ++I    +P  
Sbjct: 104 KNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFI--NMDPNA 161

Query: 327 ATIPCLLPPSGF-------EIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 369
            ++   LP  G        E+H     A      P     ++DN L+  H    H
Sbjct: 162 TSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAH 216


>sp|A0R4R3|KSHA_MYCS2 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit
           OS=Mycobacterium smegmatis (strain ATCC 700084 /
           mc(2)155) GN=kshA PE=1 SV=1
          Length = 383

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 300
           V+F    G    +   C H    L  G+V    + CP+H W +  DGKC+ +P  +   R
Sbjct: 49  VVFADSKGELNVLDAYCRHMGGDLSKGTVKGDEVACPFHDWRWGGDGKCKLVPYAKRTPR 108

Query: 301 NVKIKSLPCFEQEGMIWIW---PGDEP-PTATIPCLLPPSGFEIHAEIVMELPIEHG--- 353
             + +S     + G++++W    G+ P P   IP +      E        + IE     
Sbjct: 109 LARTRSWHTDVRGGLLFVWHDHEGNPPQPEVRIPEIPEWHSGEWTDWKWNSMLIEGSNCR 168

Query: 354 LLLDNLLDLAHAPFTH 369
            ++DN+ D+AH  + H
Sbjct: 169 EIIDNVTDMAHFFYIH 184


>sp|O22553|CHMO_BETVU Choline monooxygenase, chloroplastic OS=Beta vulgaris GN=CMO PE=2
           SV=1
          Length = 446

 Score = 46.2 bits (108), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-STQLR 300
           +++ R   G      N C HRA  L  GS  +    CPYHGW Y  DG   K   +T+ +
Sbjct: 152 YLVSRDGQGELHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGLDGSLAKASKATETQ 211

Query: 301 NVKIKSL 307
           N+  K L
Sbjct: 212 NLDPKEL 218


>sp|O04121|CHMO_SPIOL Choline monooxygenase, chloroplastic OS=Spinacia oleracea GN=CMO
           PE=1 SV=1
          Length = 439

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 25/52 (48%)

Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEK 293
           +++ R  +G      N C HRA  L  GS  +    CPYHGW Y  DG   K
Sbjct: 145 YLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAK 196


>sp|Q93XE1|CHMO_AMATR Choline monooxygenase, chloroplastic OS=Amaranthus tricolor GN=CMO
           PE=2 SV=1
          Length = 442

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 32/76 (42%)

Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 301
           +++ R   G      N C HRA  L  G+  +    CPYHGW +  DG   K   T+ + 
Sbjct: 148 YLVCRDGQGKVHAFHNVCTHRASILACGTGKKSCFVCPYHGWVFGLDGSLMKATKTENQV 207

Query: 302 VKIKSLPCFEQEGMIW 317
              K L     +  IW
Sbjct: 208 FDPKELGLVTLKVAIW 223


>sp|Q83K39|HCAE_SHIFL 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella flexneri GN=hcaE PE=3 SV=1
          Length = 453

 Score = 43.5 bits (101), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNSRAFTCPYHGWSYGINGELIDVP 122


>sp|Q9LKN0|CHMO_ATRHO Choline monooxygenase, chloroplastic OS=Atriplex hortensis GN=CMO
           PE=2 SV=1
          Length = 438

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEK 293
           +++ R  +G      N C HRA  L  GS  +    CPYHGW Y  +G   K
Sbjct: 146 YLVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGSLTK 197


>sp|Q7N4W0|HCAE_PHOLL 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Photorhabdus luminescens subsp. laumondii (strain
           TT01) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 43.1 bits (100), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R K+G      N C HR+  + +  S N     CPYHGW Y  DG+   +P
Sbjct: 65  EDSVVVVRQKNGSVKAFLNQCRHRSMRVCYADSGNTRAFTCPYHGWSYGVDGRLIDVP 122


>sp|A8A344|HCAE_ECOHS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli O9:H4 (strain HS) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|Q3YZ15|HCAE_SHISS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella sonnei (strain Ss046) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 42.7 bits (99), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|Q0T1Y1|HCAE_SHIF8 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella flexneri serotype 5b (strain 8401) GN=hcaE
           PE=3 SV=1
          Length = 453

 Score = 42.7 bits (99), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|P0ABR5|HCAE_ECOLI 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli (strain K12) GN=hcaE PE=1 SV=1
          Length = 453

 Score = 42.7 bits (99), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|P0ABR6|HCAE_ECO57 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli O157:H7 GN=hcaE PE=3 SV=1
          Length = 453

 Score = 42.7 bits (99), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|Q31XV2|HCAE_SHIBS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella boydii serotype 4 (strain Sb227) GN=hcaE
           PE=3 SV=1
          Length = 453

 Score = 42.7 bits (99), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGKCEKMP 295
           E+  V+ R KDG      N C HRA  +        R   CPYHGW Y  +G+   +P
Sbjct: 65  EDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVP 122


>sp|Q51601|CBDA_BURCE 2-halobenzoate 1,2-dioxygenase large subunit OS=Burkholderia
           cepacia GN=cbdA PE=1 SV=3
          Length = 465

 Score = 42.4 bits (98), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 229 DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYST 287
           DD +V  +   +P +I R K G    V N C+HR   L      N     C +HGW +S 
Sbjct: 69  DDYLVS-NIGRQPVIITRNKAGDVSAVINACSHRGAELCRRKQGNRSTFTCQFHGWTFSN 127

Query: 288 DGKCEKMPSTQLRN 301
            GK  K+   Q  N
Sbjct: 128 TGKLLKVKDGQDDN 141


>sp|P23099|XYLX_PSEPU Toluate 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=xylX
           PE=3 SV=1
          Length = 454

 Score = 41.6 bits (96), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKM 294
           +P  I R KDG      N C+HR   L    S N+    C +HGW +S  GK  K+
Sbjct: 73  QPIFITRNKDGELNAFVNACSHRGATLCRFRSGNKATHTCSFHGWTFSNSGKLLKV 128


>sp|P0C618|BNZA_PSEPU Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=bnzA
           PE=3 SV=1
          Length = 450

 Score = 40.4 bits (93), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           E+P V+ R KD       N C HR    C    G  N     C YHGW Y T G    +P
Sbjct: 76  EDPVVVVRQKDASIAVFLNQCRHRGMRICRADAG--NAKAFTCSYHGWAYDTAGNLVNVP 133


>sp|A5W4F2|BNZA_PSEP1 Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida (strain
           F1 / ATCC 700007) GN=bnzA PE=1 SV=1
          Length = 450

 Score = 40.4 bits (93), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           E+P V+ R KD       N C HR    C    G  N     C YHGW Y T G    +P
Sbjct: 76  EDPVVVVRQKDASIAVFLNQCRHRGMRICRADAG--NAKAFTCSYHGWAYDTAGNLVNVP 133


>sp|O52379|NAGG_RALSP Salicylate 5-hydroxylase, large oxygenase component OS=Ralstonia
           sp. GN=nagG PE=1 SV=1
          Length = 423

 Score = 40.0 bits (92), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 243 VIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           ++ R  DG    V+N CAHR    C    G+  +    CPYH W YS  G  + +P
Sbjct: 75  IMVRDPDGGINVVENVCAHRGMRFCRERHGNAKD--FFCPYHQWNYSLKGDLQGVP 128


>sp|P07769|BENA_ACIAD Benzoate 1,2-dioxygenase subunit alpha OS=Acinetobacter sp. (strain
           ADP1) GN=benA PE=3 SV=2
          Length = 461

 Score = 39.7 bits (91), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 298
           +P +I R ++G    + N C+HR   L      N+    CP+HGW ++  GK  K+    
Sbjct: 76  QPILIARNRNGELNAMINACSHRGAQLCRHKRGNKTTYTCPFHGWTFNNSGKLLKVKDPS 135

Query: 299 LRNVKIKSLPCFEQEG 314
                     CF Q+G
Sbjct: 136 DAGYS----DCFNQDG 147


>sp|Q07944|BEDC1_PSEPU Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida
           GN=bedC1 PE=1 SV=1
          Length = 450

 Score = 39.7 bits (91), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
           E+P V+ R KD       N C HR   +    + N     C YHGW Y T G    +P  
Sbjct: 76  EDPVVVVRQKDASIAVFLNQCRHRGMRICRSDAGNAKAFTCSYHGWAYDTAGNLINVP-- 133

Query: 298 QLRNVKIKSLPCFEQE 313
                + +S  C +++
Sbjct: 134 ----YEAESFACLDKK 145


>sp|O85673|ANTDA_ACIAD Anthranilate 1,2-dioxygenase large subunit OS=Acinetobacter sp.
           (strain ADP1) GN=antA PE=1 SV=1
          Length = 471

 Score = 39.3 bits (90), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 228 KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYS 286
            ++  V      +P ++ R   G    + N C HR   L  +   N+    CP+H W Y 
Sbjct: 62  NNNDFVTVQIGRQPMIVSRDGKGELHAMVNACEHRGATLTRVAKGNQSVFTCPFHAWCYK 121

Query: 287 TDGKCEKMPS 296
           +DG+  K+ +
Sbjct: 122 SDGRLVKVKA 131


>sp|Q9SZR0|CHMO_ARATH Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=At4g29890 PE=2 SV=2
          Length = 422

 Score = 39.3 bits (90), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 301
           +V+ R ++G      N C+H A  L  G+  +    C YHGW YS  G   K  +T++  
Sbjct: 121 FVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVK--ATRMSG 178

Query: 302 VKIKSL 307
           ++  SL
Sbjct: 179 IQNFSL 184


>sp|Q8GI16|CARAC_PSERE Ferredoxin CarAc OS=Pseudomonas resinovorans GN=carAc PE=1 SV=1
          Length = 107

 Score = 38.5 bits (88), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 214 LKNFWFPVAFSTDLKDDTMVPFD-CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
           +   W  V  ++D++  T+   +     P  ++R  D      ++TC H    L  G+++
Sbjct: 1   MNQIWLKVCAASDMQPGTIRRVNRVGAAPLAVYRVGDQFYA-TEDTCTHGIASLSEGTLD 59

Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 318
              I+CP+HG  ++    C  MP++    V +       +EG +++
Sbjct: 60  GDVIECPFHGGAFNV---CTGMPASSPCTVPLGVFEVEVKEGEVYV 102


>sp|Q93SW8|UCRIB_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Nostoc sp. (strain
           PCC 7120 / UTEX 2576) GN=petC2 PE=3 SV=1
          Length = 178

 Score = 38.1 bits (87), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 240 EPWVIFRGKDGI--PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
           EP  +   +DG   P  + N C H  C      V++ + QCP HG  Y   G  E+ P+ 
Sbjct: 86  EPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQ-QFQCPCHGSRYDAQGSVERGPA- 143

Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDE 323
              N  +K +    ++  IWI P  E
Sbjct: 144 ---NRPLKLVQVQVKDDYIWISPWQE 166


>sp|O52382|NDOB_RALSP Naphthalene 1,2-dioxygenase subunit alpha OS=Ralstonia sp. GN=nagAc
           PE=1 SV=1
          Length = 447

 Score = 38.1 bits (87), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 243 VIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           ++ R  DG      N C HR   L H  + N     C YHGW + ++G+ + +P
Sbjct: 63  IVSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCSYHGWGFGSNGELQSVP 116


>sp|Q51494|NDOB_PSEAI Naphthalene 1,2-dioxygenase subunit alpha OS=Pseudomonas aeruginosa
           GN=ndoB PE=3 SV=1
          Length = 449

 Score = 37.4 bits (85), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 243 VIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           ++ R  DG      N C HR   L H  + N     C YHGW +  +G+ + +P
Sbjct: 65  IVSRQNDGSIRAFLNVCRHRGKTLVHAEAGNAKGFVCSYHGWGFGANGELQSVP 118


>sp|Q65SI5|RNB_MANSM Exoribonuclease 2 OS=Mannheimia succiniciproducens (strain MBEL55E)
           GN=rnb PE=3 SV=1
          Length = 659

 Score = 37.4 bits (85), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK---HVPFMQYLWRHFAEQV 480
           E ++T+Q    LHQ  +   + RKK  LL++   D++ VL    HV  ++  +R  A Q+
Sbjct: 335 ENESTQQQINWLHQFALVRINWRKKHGLLFKEKPDYSFVLADNGHVREIKAEYRRIANQI 394

Query: 481 LNEDL---RLVLGQQERMNNGANVWNLPVGYDK 510
           + E +    +        N    ++N  VG+DK
Sbjct: 395 VEESMIIANICCAHYLAKNAQTGIFNTHVGFDK 427


>sp|Q93SW6|UCRIB_ANAVT Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena
           variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3
           SV=1
          Length = 178

 Score = 37.4 bits (85), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 240 EPWVIFRGKDGI--PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
           EP  +   +DG   P  + N C H  C      V++ + QCP HG  Y   G  E+ P+ 
Sbjct: 86  EPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQ-QFQCPCHGSRYDAQGSVERGPAN 144

Query: 298 ---QLRNVKIKSLPCFEQEGMIWI--WPGDEPPTATIP 330
              +L +V++K       +  IWI  W   +P T   P
Sbjct: 145 RPLKLVHVQVK-------DDYIWISSWQETDPRTGEKP 175


>sp|Q52438|BPHA1_PSES1 Biphenyl dioxygenase subunit alpha OS=Pseudomonas sp. (strain
           KKS102) GN=bphA1 PE=3 SV=1
          Length = 458

 Score = 37.0 bits (84), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 295
           E+P ++ R KDG      N C HR    C    G  N     C YHGW Y   G    +P
Sbjct: 81  EDPVIMVRQKDGSIKVFLNQCRHRGMRICRSDAG--NAKAFTCTYHGWAYDIAGNLVNVP 138


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,039,794
Number of Sequences: 539616
Number of extensions: 9153282
Number of successful extensions: 18809
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 18719
Number of HSP's gapped (non-prelim): 90
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)