BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009235
(539 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 175/388 (45%), Gaps = 41/388 (10%)
Query: 108 QAVFHD-LLGEGIFNS-DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDS 165
Q VF + L G+G+ + + + W QR+ L F+ +L M + +A L IL++
Sbjct: 65 QTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQL--VEILEA 122
Query: 166 AQLKADPVDLQDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQ---- 221
PV +QD+L D + AFG + G +A + L+
Sbjct: 123 KADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLL------GAQKPLSQAVKLMLEGITA 176
Query: 222 -RFILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLL 280
R L + L +K LR + S+ + + D + R+ L ++ D+L
Sbjct: 177 SRNTLAKFLPGKRKQLR-----EVRESIRFLRQVGRDWVQRRREAL---KRGEEVPADIL 228
Query: 281 SRFMKKKE-SYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVL 339
++ +K +E + D L + F +AG +TS+ L++ + + P + ++ E+ V+
Sbjct: 229 TQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI 288
Query: 340 IETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV 399
R L FE+L RL YL L E+LRLYP + ++ ++ L DG V
Sbjct: 289 GSKRY----------LDFEDLGRLQYLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRV 337
Query: 400 PAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLG 459
P + + +S Y GRM T+ +D L F P+R+ G F + F+ G R C+G
Sbjct: 338 PGNTPLLFSTYVMGRM-DTYFEDPLTFNPDRF--GPGAP---KPRFTYFPFSLGHRSCIG 391
Query: 460 KDLAYLQMKSVAAAVLLRHGLTVVPGHK 487
+ A +++K V A +L R +VPG +
Sbjct: 392 QQFAQMEVKVVMAKLLQRLEFRLVPGQR 419
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL++ + K+ T D + + + F++AG +T+S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K+ E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKVAEEATRVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G V I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 161/381 (42%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 83 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 138
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 193
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 194 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 239
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+VP S + D +L
Sbjct: 300 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEY 348
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 349 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 403
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 404 IGQQFA-LHEATLVLGMMLKH 423
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+GK A L ++ ++L+H
Sbjct: 401 IGKQFA-LHEATLVLGMMLKH 420
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 86 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 141
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 142 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 196
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 197 TNPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 242
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 243 MLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAAR 302
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 303 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 351
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 352 PLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 406
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 407 IGQQFA-LHEATLVLGMMLKH 426
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 181/439 (41%), Gaps = 63/439 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 81 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 136
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 191
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 192 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 237
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 298 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEY 346
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 401
Query: 458 LGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGLKVNVHTRE--LEGIV 515
+G+ A + V +L ++++ K +LTL G V +++ L GI
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL-KPEGFVVKAKSKKIPLGGIP 460
Query: 516 -----QSIKK-RKKNNCMH 528
QS KK RKK H
Sbjct: 461 SPSTEQSAKKVRKKAENAH 479
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 83 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 138
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 193
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 194 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 239
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 300 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 348
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 349 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 403
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 404 IGQQFA-LHEATLVLGMMLKH 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 81 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 136
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 191
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 192 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 237
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 298 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 401
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 402 IGQQFA-LHEATLVLGMMLKH 421
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 83 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 138
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 193
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 194 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 239
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 300 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEY 348
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 349 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 403
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 404 IGQQFA-LHEATLVLGMMLKH 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +T+S L++ +
Sbjct: 221 IADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYF 280
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LR++P+
Sbjct: 281 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRIWPTA 329
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D ML + G + I R ++ WGDD EFRPER+ + +
Sbjct: 330 PAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF--ENPSAIP 387
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 388 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 421
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 47/377 (12%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 81 DFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 136
Query: 171 DP-VDLQDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEAS---LQRFILP 226
D +++ + + RLT D I F + P + F ++ RA + + LQR
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQP-HPFITSMVRALDEAMNKLQRANPD 195
Query: 227 EILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKK 286
+ + K + +++ + +I RK G DDLL+ +
Sbjct: 196 DPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTHMLNG 241
Query: 287 KESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIE 341
K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E VL
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-- 299
Query: 342 TRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPA 401
VD ++++ +L Y+ L+E LRL+P+ P S + D +L +
Sbjct: 300 ---------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 350
Query: 402 GSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKD 461
G + I R ++ WGDD EFRPER+ + + H F F G R C+G+
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRACIGQQ 405
Query: 462 LAYLQMKSVAAAVLLRH 478
A L ++ ++L+H
Sbjct: 406 FA-LHEATLVLGMMLKH 421
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +T+S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +T+S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F + G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPYGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 180/439 (41%), Gaps = 63/439 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 81 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 136
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 191
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 192 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 237
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 298 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 401
Query: 458 LGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGLKVNVHTRE--LEGIV 515
G+ A + V +L ++++ K +LTL G V +++ L GI
Sbjct: 402 PGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL-KPEGFVVKAKSKKIPLGGIP 460
Query: 516 -----QSIKK-RKKNNCMH 528
QS KK RKK H
Sbjct: 461 SPSTEQSAKKVRKKAENAH 479
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
G+ A L ++ ++L+H
Sbjct: 401 EGQQFA-LHEATLVLGMMLKH 420
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG + +S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG + +S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++ G +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +++S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +++S LS+ +
Sbjct: 221 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 280
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 281 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 387
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 388 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 421
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG +++S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG + +S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F + G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPWGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWL 320
+ ++ G DDLL+ + K+ T D +++ + F++AG + +S LS+ +
Sbjct: 220 IADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYF 279
Query: 321 VIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSV 380
+++NPHV K E VL VD ++++ +L Y+ L+E LRL+P+
Sbjct: 280 LVKNPHVLQKAAEEAARVL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 381 PEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFE 440
P S + D +L + G + I R ++ WGDD EFRPER+ + +
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 441 MHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
H F F G R C+G+ A L ++ ++L+H
Sbjct: 387 QH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 57/412 (13%)
Query: 78 QGLVTVTCDPKNIEHILKHRFD-NYPKGPTWQAVFHDLLGEGIFNS--DGDTWLFQRKTA 134
Q L+ CD + RFD N + P + DL G+G+F S W
Sbjct: 56 QRLIKEACD--------ESRFDKNLSQAPKF---VRDLAGDGLFTSWTHEKNWKKAHNIL 104
Query: 135 ALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKADP-VDLQDLLLRLTFDNICGLAFG 193
F+ + ++ A V A+ L + +L AD +++ + + RLT D I F
Sbjct: 105 LPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN 160
Query: 194 KDPQTCAPGLPENGFASAFDRATEASLQ--RFILPEILWKAKKWLRLGMEVSLSRSLGHI 251
+ P + F ++ RA + ++ R P+ + + ++ + L +
Sbjct: 161 YRFNSFYRDQP-HPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDL--V 217
Query: 252 DEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAG 306
D+ ++D ++ G DDLL+ + K+ T D +++ + F+ AG
Sbjct: 218 DKIIAD-----------RKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 266
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ +S LS+ + +++NPH K E VL VD +++ +L Y+
Sbjct: 267 HEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----------VDPVPSHKQVKQLKYV 315
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEF 426
L+E LRL+P+ P S + D +L + G + I R ++ WGDD EF
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 427 RPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
RPER+ + + H F F G R C+G+ A L ++ ++L+H
Sbjct: 376 RPERF--ENPSAIPQH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 421
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPHGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 174/412 (42%), Gaps = 57/412 (13%)
Query: 78 QGLVTVTCDPKNIEHILKHRFD-NYPKGPTWQAVFHDLLGEGIFNS--DGDTWLFQRKTA 134
Q L+ CD + RFD N + P + D G+G+F S W
Sbjct: 55 QRLIKEACD--------ESRFDKNLSQAPKF---VRDFAGDGLFTSWTHEKNWKKAHNIL 103
Query: 135 ALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKADP-VDLQDLLLRLTFDNICGLAFG 193
F+ + ++ A V A+ L + +L AD +++ + + RLT D I F
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN 159
Query: 194 KDPQTCAPGLPENGFASAFDRATEASLQ--RFILPEILWKAKKWLRLGMEVSLSRSLGHI 251
+ P + F ++ RA + ++ R P+ + + ++ + L +
Sbjct: 160 YRFNSFYRDQP-HPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDL--V 216
Query: 252 DEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYT-----DAFLKHVALNFILAG 306
D+ ++D ++ G DDLL+ + K+ T D +++ + F+ AG
Sbjct: 217 DKIIAD-----------RKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAG 265
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ +S LS+ + +++NPH K E VL VD ++++ +L Y+
Sbjct: 266 HEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----------VDPVPSYKQVKQLKYV 314
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEF 426
L+E LRL+P+ P S + D +L + G + I R ++ WGDD EF
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 427 RPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
RPER+ + + H F F G R C+G+ A L ++ ++L+H
Sbjct: 375 RPERF--ENPSAIPQH---AFKPFGNGQRACIGQQFA-LHEATLVLGMMLKH 420
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + ++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F++AG +T+S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPAGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 135
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 190
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 191 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 236
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F+ AG + +S LS+ + +++NPHV K E
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 297 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 345
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 400
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 401 IGQQFA-LHEATLVLGMMLKH 420
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 55/381 (14%)
Query: 113 DLLGEGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKA 170
D G+G+F S W F+ + ++ A V A+ L + +L A
Sbjct: 81 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNA 136
Query: 171 DP-VDLQDLLLRLTFDNI--CGL-----AFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
D +++ + + RLT D I CG +F +D P A D A LQR
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD----QPHPFITSMVRALDEAMN-KLQR 191
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
+ + K + +++ + +I RK G DDLL+
Sbjct: 192 ANPDDPAYDENKR-------QFQEDIKVMNDLVDKIIADRK-------ASGEQSDDLLTH 237
Query: 283 FMKKKESYT-----DAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
+ K+ T D +++ + F+ AG + +S LS+ + +++NPHV K E
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
VL VD ++++ +L Y+ L+E LRL+P+ P S + D +L
Sbjct: 298 VL-----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 346
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+ G + I R ++ WGDD EFRPER+ + + H F F G R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH---AFKPFGNGQRAC 401
Query: 458 LGKDLAYLQMKSVAAAVLLRH 478
+G+ A L ++ ++L+H
Sbjct: 402 IGQQFA-LHEATLVLGMMLKH 421
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 200/476 (42%), Gaps = 52/476 (10%)
Query: 27 LKGPRVWPLLGSLPGLI--ENCDRLHDWISDNLRACGGTYQTCICAIPFLTKKQGLVTVT 84
L GP WPLLGSL + + HD +++ + G ++ + + F + G ++
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGS--FDSVHLGSPSLL 83
Query: 85 CDPKNIEHILKHRFDNYPKGPTWQAVFHDLLGE--GIFNSDGDTWLFQRKTAALEFTTRT 142
E R + P W+A + D E G+ +G W QR +A F +
Sbjct: 84 EALYRTESAHPQRLEIKP----WKA-YRDHRNEAYGLMILEGQEW--QRVRSA--FQKKL 134
Query: 143 LRQAMARWVSRAIMLRFCPILDSAQLKADP----VDLQDLLLRLTFDNICGLAFGKDPQT 198
++ + + I L+ D DL L + +F++IC + + K
Sbjct: 135 MKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGL 194
Query: 199 CAPGLPENG--FASAFDRATEASLQRFILPEILWKAKKWLRLGMEVSLSRSLG--HIDEY 254
E F +A + + P L K RL +V + +L I +
Sbjct: 195 LQKETEEEALTFITAIKTMMSTFGKMMVTPVELHK-----RLNTKVWQAHTLAWDTIFKS 249
Query: 255 LSDVINARKLELTSQQKDGNPHDDLLSR-FMKKKESYTDAFLKHVALNFILAGRDTSSAA 313
+ I+ R L+ SQQ + D+ + + KKE Y LA +T++ +
Sbjct: 250 VKPCIDNR-LQRYSQQPGADFLCDIYQQDHLSKKELYA------AVTELQLAAVETTANS 302
Query: 314 LSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSET 373
L W + + +NP + ++L+E+ SVL + + E+L + YLKA L E+
Sbjct: 303 LMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA----------EDLRNMPYLKACLKES 352
Query: 374 LRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLS 433
+RL PSVP ++ + +L + +P G+ +T + G + +D +FRPERWL
Sbjct: 353 MRLTPSVPFTTRTLDKPTVLGEYA-LPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQ 410
Query: 434 SDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVE 489
+ + + F + F G R+C+G+ LA LQ+ ++ ++ + VE
Sbjct: 411 KE----KKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVE 462
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 305 AGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLI 364
AG DT + A+SW ++ P ++ KI +EL +V+ R S D P +L
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLS---DRP-------QLP 342
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
YL+A + ET R +P H D +G ++P V + + W +D
Sbjct: 343 YLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-EDPS 401
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVP 484
EFRPER+L++DGT S K + F G R C+G+ LA ++ A +L + +V P
Sbjct: 402 EFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPP 461
Query: 485 GHKVEQKMSLTLFMKNGLKVNVHTREL 511
G KV+ L MK+ +V R
Sbjct: 462 GVKVDLTPIYGLTMKHARCEHVQARRF 488
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 295 LKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEP 354
LK L + AG +T ++ALS F L+ Q+ + +++ R + + +
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERV-----------RQEQNKLQLSQE 292
Query: 355 LGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGR 414
L E L ++ YL L E LRL P V + +I D G P G V+Y I T
Sbjct: 293 LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHA 351
Query: 415 MRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAV 474
+ D +F PER+ + DG+ + F V F G R CLGK+ A L+MK A +
Sbjct: 352 DPDLYPDPE-KFDPERF-TPDGSA-THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRL 408
Query: 475 LLRHGLTVVPGHKVEQKMSLTLFMKNGLKVNVHT 508
+ + T++PG +E ++ + K+ L+V +H+
Sbjct: 409 IQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHS 442
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 58/314 (18%)
Query: 174 DLQDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQRF--------IL 225
D+ D L R F++I + FG+ G+ E R +A Q F +
Sbjct: 157 DISDDLFRFAFESITNVIFGE-----RQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLP 211
Query: 226 PEI--LWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQ------QKDGNPHD 277
P++ L++ K W H+ + DVI + K ++ +Q ++ G+ H
Sbjct: 212 PDLFRLFRTKTWK------------DHVAAW--DVIFS-KADIYTQNFYWELRQKGSVHH 256
Query: 278 D---LLSRFM-KKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILR 333
D +L R + K S+ D +K + G DT+S L W + + +N V+D +
Sbjct: 257 DYRGILYRLLGDSKMSFED--IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRA 314
Query: 334 ELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDML 393
E+ + + +GD + PL LKA++ ETLRL+P + + +V+D++
Sbjct: 315 EVLAARHQAQGDMATMLQLVPL----------LKASIKETLRLHP-ISVTLQRYLVNDLV 363
Query: 394 PDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAG 453
+PA + V +IYA GR T+ D F P RWLS D F+ + F G
Sbjct: 364 LRDYMIPAKTLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDKNI----TYFRNLGFGWG 418
Query: 454 PRICLGKDLAYLQM 467
R CLG+ +A L+M
Sbjct: 419 VRQCLGRRIAELEM 432
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 58/314 (18%)
Query: 174 DLQDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQRF--------IL 225
D+ D L R F++I + FG+ G+ E R +A Q F +
Sbjct: 154 DISDDLFRFAFESITNVIFGE-----RQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLP 208
Query: 226 PEI--LWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQ------QKDGNPHD 277
P++ L++ K W H+ + DVI + K ++ +Q ++ G+ H
Sbjct: 209 PDLFRLFRTKTWK------------DHVAAW--DVIFS-KADIYTQNFYWELRQKGSVHH 253
Query: 278 D---LLSRFM-KKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILR 333
D +L R + K S+ D +K + G DT+S L W + + +N V+D +
Sbjct: 254 DYRGILYRLLGDSKMSFED--IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRA 311
Query: 334 ELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDML 393
E+ + + +GD + PL LKA++ ETLRL+P + + +V+D++
Sbjct: 312 EVLAARHQAQGDMATMLQLVPL----------LKASIKETLRLHP-ISVTLQRYLVNDLV 360
Query: 394 PDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAG 453
+PA + V +IYA GR T+ D F P RWLS D F+ + F G
Sbjct: 361 LRDYMIPAKTLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDKNI----TYFRNLGFGWG 415
Query: 454 PRICLGKDLAYLQM 467
R CLG+ +A L+M
Sbjct: 416 VRQCLGRRIAELEM 429
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 266 LTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----GRDTSSAALSWFFWLV 321
+ ++ G DDLL+ ++ K+ D + + ++A G +T ++ + W +
Sbjct: 231 IAERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQAL 290
Query: 322 IQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVP 381
+P D+I E+ +V T G P+ FE++ +L + + E +RL P+V
Sbjct: 291 ADHPEHADRIRDEVEAV---TGG--------RPVAFEDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 382 EDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEM 441
++ + + L G +PAG+ + YS YA R ++ DD LEF P+RWL
Sbjct: 340 VLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANVP- 396
Query: 442 HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTL 496
+ F+AG R C + Q+ + AA+ ++ V G ++ +TL
Sbjct: 397 --KYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITL 449
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 19/258 (7%)
Query: 230 WKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES 289
W WL L R+ I + I R+ SQ+K + LL K
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRR---QSQEKIDDILQTLLDATYKDGRP 247
Query: 290 YTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETR-GDDTS 348
TD + + + +LAG+ TSS +W + + DK L++ C + +T G++
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFL-----ARDKTLQKKCYLEQKTVCGENLP 302
Query: 349 TWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYS 408
PL +++L L L + ETLRL P + + + G +P G V S
Sbjct: 303 -----PLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVA-GYTIPPGHQVCVS 356
Query: 409 IYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMK 468
R++ +W + L+F P+R+L + E F +V F AG C+G++ AY+Q+K
Sbjct: 357 PTVNQRLKDSWVER-LDFNPDRYLQDNPASGE---KFAYVPFGAGRHRCIGENFAYVQIK 412
Query: 469 SVAAAVLLRHGLTVVPGH 486
++ + +L + ++ G+
Sbjct: 413 TIWSTMLRLYEFDLIDGY 430
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 291 TDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTW 350
+D + ++ L+ AG DT + A+SW ++ NP V+ KI EL +V+ +R S
Sbjct: 276 SDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLS-- 333
Query: 351 VDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIY 410
+ L Y++A + ET R VP H D G ++P G V + +
Sbjct: 334 --------DRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQW 385
Query: 411 ATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSV 470
+ W + EF PER+L+ DG + S K + F G R C+G+ +A ++
Sbjct: 386 QINHDQKLWVNPS-EFLPERFLTPDGA-IDKVLSEKVIIFGMGKRKCIGETIARWEVFLF 443
Query: 471 AAAVLLRHGLTVVPGHKVEQKMSLTLFMKNG 501
A +L R +V G KV+ L MK+
Sbjct: 444 LAILLQRVEFSVPLGVKVDMTPIYGLTMKHA 474
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 281 SRFMKKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLI 340
S+ + ++ +D L ++ FI AG +T+S+ LS+ + + +P V+ K+ E+ +VL
Sbjct: 259 SKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP 318
Query: 341 ETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVP 400
P ++ + ++ YL ++ETLRL+P + + V D+ +G F+P
Sbjct: 319 N----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIP 367
Query: 401 AGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGK 460
G V YA R W + +F PER+ + D + + F +GPR C+G
Sbjct: 368 KGVVVMIPSYALHRDPKYWTEPE-KFLPERFSKKNKDNI---DPYIYTPFGSGPRNCIGM 423
Query: 461 DLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSL 494
A + MK VL ++ K+SL
Sbjct: 424 RFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 457
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 281 SRFMKKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLI 340
S+ + ++ +D L ++ FI AG +T+S+ LS+ + + +P V+ K+ E+ +VL
Sbjct: 260 SKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP 319
Query: 341 ETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVP 400
P ++ + ++ YL ++ETLRL+P + + V D+ +G F+P
Sbjct: 320 N----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIP 368
Query: 401 AGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGK 460
G V YA R W + +F PER+ + D + + F +GPR C+G
Sbjct: 369 KGVVVMIPSYALHRDPKYWTEPE-KFLPERFSKKNKDNI---DPYIYTPFGSGPRNCIGM 424
Query: 461 DLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSL 494
A + MK VL ++ K+SL
Sbjct: 425 RFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 458
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 281 SRFMKKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLI 340
S+ + ++ +D L ++ FI AG +T+S+ LS+ + + +P V+ K+ E+ +VL
Sbjct: 261 SKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP 320
Query: 341 ETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVP 400
P ++ + ++ YL ++ETLRL+P + + V D+ +G F+P
Sbjct: 321 N----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIP 369
Query: 401 AGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGK 460
G V YA R W + +F PER+ + D + + F +GPR C+G
Sbjct: 370 KGVVVMIPSYALHRDPKYWTEPE-KFLPERFSKKNKDNI---DPYIYTPFGSGPRNCIGM 425
Query: 461 DLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSL 494
A + MK VL ++ K+SL
Sbjct: 426 RFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 459
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 305 AGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFE------ 358
AG +T+++ + W ++ NP V+ K+ E +D+ +GF
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEE----------------IDQNVGFSRTPTIS 327
Query: 359 ELDRLIYLKAALSETLRLYPSVPEDSKH-VIVDDMLPDGTF-VPAGSSVTYSIYATGRMR 416
+ +RL+ L+A + E LRL P P H VD + G F V G+ V +++A
Sbjct: 328 DRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI--GEFAVDKGTEVIINLWALHHNE 385
Query: 417 STWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLL 476
W +F PER+L+ GT+ + S ++ F AGPR C+G+ LA ++ + A +L
Sbjct: 386 KEWHQPD-QFMPERFLNPAGTQL-ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQ 443
Query: 477 RHGLTVVPGHKVE--QKMSLTLFMKNGLKVNVHTRE 510
R L V ++ + + +F+ + KV + R+
Sbjct: 444 RFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVRQ 479
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 150/366 (40%), Gaps = 51/366 (13%)
Query: 116 GEGIFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIMLRF-----CPILDSAQLK 169
G G+ ++G+ W R+ F+ T+R M + R++ R C I + + K
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGK---RSVEERIQEEAQCLIEELRKSK 142
Query: 170 ADPVDLQDLLLRLTFDNICGLAFGK----DPQTCAPGLPENGFASAFDRATEASLQRFIL 225
+D L +T + IC + FGK Q L N F F + Q F L
Sbjct: 143 GALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKML--NLFYQTFSLISSVFGQLFEL 200
Query: 226 PEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRF-- 283
K G + ++L I+ Y+ + + L D + DL+ +
Sbjct: 201 FSGFLKHFP----GAHRQVYKNLQEINAYIGHSVEKHRETL-----DPSAPRDLIDTYLL 251
Query: 284 -MKKKESYTDAFLKHVALNF-----ILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCS 337
M+K++S + H LN AG +T+S L + F L+++ PHV +++ RE+
Sbjct: 252 HMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQ 311
Query: 338 VLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGT 397
V+ R P + ++ Y +A + E R +P H++ G
Sbjct: 312 VIGPHR----------PPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGY 361
Query: 398 FVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRIC 457
+P + V + I +T + + F P+ +L ++G + + F+ F+ G RIC
Sbjct: 362 IIPKDTEV-FLILSTALHDPHYFEKPDAFNPDHFLDANGA---LKKTEAFIPFSLGKRIC 417
Query: 458 LGKDLA 463
LG+ +A
Sbjct: 418 LGEGIA 423
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 273 GNPHDDLLSRFMKKKE--------SYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQN 324
P DL F+ + E S+ D L+ V + AG T+S L+W L+I +
Sbjct: 243 AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILH 302
Query: 325 PHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDS 384
P V+ ++ +E+ V+ + R + P Y A + E R VP
Sbjct: 303 PDVQRRVQQEIDDVIGQVRRPEMGDQAHMP----------YTTAVIHEVQRFGDIVPLGV 352
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDS 444
H+ D+ G +P G+++ ++ + + + W + F PE +L + G +
Sbjct: 353 THMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKPE-- 409
Query: 445 FKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGH 486
F+ F+AG R CLG+ LA +++ ++L +V G
Sbjct: 410 -AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 273 GNPHDDLLSRFMKKKE--------SYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQN 324
P DL F+ + E S+ D L+ V + AG T+S L+W L+I +
Sbjct: 243 AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILH 302
Query: 325 PHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDS 384
P V+ ++ +E+ V+ + R + P Y A + E R VP
Sbjct: 303 PDVQRRVQQEIDDVIGQVRRPEMGDQAHMP----------YTTAVIHEVQRFGDIVPLGM 352
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDS 444
H+ D+ G +P G+++ ++ + + + W + F PE +L + G +
Sbjct: 353 THMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKPE-- 409
Query: 445 FKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGH 486
F+ F+AG R CLG+ LA +++ ++L +V G
Sbjct: 410 -AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 21/242 (8%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQ-QKDGNPHDDLLSRFMKKKES----YTDA 293
G + +++ + EY+S+ + L +D D LL K+K S YT
Sbjct: 209 GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLT--DCLLVEMEKEKHSAERLYTMD 266
Query: 294 FLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDE 353
+ + AG +T+S L + ++++ P +E+K+ E+ V+ +R +
Sbjct: 267 GITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEM 326
Query: 354 PLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATG 413
P Y+ A + E R VP + H D + G +P G+ V ++ +
Sbjct: 327 P----------YMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVL 376
Query: 414 RMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAA 473
+ D +F+PE +L+ +G KF+ D FK F+ G R+C G+ LA +++ + A
Sbjct: 377 YDNQEFPDP-EKFKPEHFLNENG-KFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCA 432
Query: 474 VL 475
+L
Sbjct: 433 IL 434
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 26/278 (9%)
Query: 228 ILWKAKKW---LRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFM 284
L+ A W L G L R+ + ++LS +I + Q + D L
Sbjct: 201 FLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQ-HFVDAYLDEMD 259
Query: 285 KKKESYTDAFLKHVAL----NFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLI 340
+ K + F K + I+AG +T++ L W + P+++ ++ +E+ ++
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM- 318
Query: 341 ETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVP 400
+ +W D+ ++ Y +A L E LR VP H +D + G +P
Sbjct: 319 --GPNGKPSWDDKC-------KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
Query: 401 AGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGK 460
G++V ++Y+ W D + F PER+L S G F ++ V F+ G R CLG+
Sbjct: 370 KGTTVITNLYSVHFDEKYWRDPEV-FHPERFLDSSGY-FAKKEA--LVPFSLGRRHCLGE 425
Query: 461 DLAYLQMKSVAAAVLLRHGL----TVVPGHKVEQKMSL 494
LA ++M A+L R L +VP K M+L
Sbjct: 426 HLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTL 463
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 38/330 (11%)
Query: 163 LDSAQLKADPVDLQDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQR 222
L+ ++ VD+ LL R+ D L F + P L E+ +A
Sbjct: 175 LEEVTNESGYVDVLTLLRRVMLDTSNTL-FLRIP------LDESAIVVKIQGYFDAWQAL 227
Query: 223 FILPEILWKAKKWLRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSR 282
I P+I +K WL E +S+ + + + +I ++ +++++K D
Sbjct: 228 LIKPDIFFKIS-WLYKKYE----KSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATEL 282
Query: 283 FM-KKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIE 341
+ +K+ T + L ++A DT S +L + +L+ ++P+VE+ I++E+ +V+ E
Sbjct: 283 ILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE 342
Query: 342 TRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPA 401
+ +++ +L ++ + E++R P V + + DD++ DG V
Sbjct: 343 -----------RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKK 390
Query: 402 GSSVTYSIYATGRMRSTWGDDCLEF--RPERWLSSDGTKFEMHDSFKFVAFNAGPRICLG 459
G+++ +I GRM LEF +P + + K + F+ F GPR C G
Sbjct: 391 GTNIILNI---GRMHR------LEFFPKPNEFTLENFAKNVPYRYFQ--PFGFGPRGCAG 439
Query: 460 KDLAYLQMKSVAAAVLLRHGLTVVPGHKVE 489
K +A + MK++ +L R + + G VE
Sbjct: 440 KYIAMVMMKAILVTLLRRFHVKTLQGQCVE 469
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 26/278 (9%)
Query: 228 ILWKAKKW---LRLGMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFM 284
L+ A W L G L R+ + ++LS +I + Q + D L
Sbjct: 201 FLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQ-HFVDAYLDEMD 259
Query: 285 KKKESYTDAFLKHVAL----NFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLI 340
+ K + F K + I+AG +T++ L W + P+++ ++ +E+ ++
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM- 318
Query: 341 ETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVP 400
+ +W D+ ++ Y +A L E LR VP H +D + G +P
Sbjct: 319 --GPNGKPSWDDKC-------KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
Query: 401 AGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGK 460
G++V ++Y+ W D + F PER+L S G F ++ V F+ G R CLG+
Sbjct: 370 KGTTVITNLYSVHFDEKYWRDPEV-FHPERFLDSSGY-FAKKEA--LVPFSLGRRHCLGE 425
Query: 461 DLAYLQMKSVAAAVLLRHGL----TVVPGHKVEQKMSL 494
LA ++M A+L R L +VP K M+L
Sbjct: 426 HLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTL 463
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHD--DLLSRFMKKKESYTDAFLK 296
G + R+L I+ ++ + + L NP D D+ M+K +S +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRMEKDKSDPSSEFH 265
Query: 297 H-----VALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWV 351
H L+ AG +T+S L + F L+++ PHV +++ +E+ V+ R
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------- 317
Query: 352 DEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYA 411
P ++ ++ Y A + E RL +P H + D G +P + V + + +
Sbjct: 318 --PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLS 374
Query: 412 TGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+ + + F P +L ++G + + F+ F+ G RICLG+ +A ++
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGA---LKRNEGFMPFSLGKRICLGEGIARTEL 427
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHD--DLLSRFMKKKESYTDAFLK 296
G + R+L I+ ++ + + L NP D D+ M+K +S +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRMEKDKSDPSSEFH 265
Query: 297 H-----VALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWV 351
H L+ AG +T+S L + F L+++ PHV +++ +E+ V+ R
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------- 317
Query: 352 DEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYA 411
P ++ ++ Y A + E RL +P H + D G +P + V + + +
Sbjct: 318 --PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLS 374
Query: 412 TGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+ + + F P +L ++G + + F+ F+ G RICLG+ +A ++
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGA---LKRNEGFMPFSLGKRICLGEGIARTEL 427
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHD--DLLSRFMKKKESYTDAFLK 296
G + R+L I+ ++ + + L NP D D+ M+K +S +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRMEKDKSDPSSEFH 265
Query: 297 H-----VALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWV 351
H L+ AG +T+S L + F L+++ PHV +++ +E+ V+ R
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------- 317
Query: 352 DEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYA 411
P ++ ++ Y A + E RL +P H + D G +P + V + + +
Sbjct: 318 --PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLS 374
Query: 412 TGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+ + + F P +L ++G + + F+ F+ G RICLG+ +A ++
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGA---LKRNEGFMPFSLGKRICLGEGIARTEL 427
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHD--DLLSRFMKKKESYTDAFLK 296
G + R+L I+ ++ + + L NP D D+ M+K +S +
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRMEKDKSDPSSEFH 265
Query: 297 H-----VALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWV 351
H L+ AG +T+S L + F L+++ PHV +++ +E+ V+ R
Sbjct: 266 HQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------- 317
Query: 352 DEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYA 411
P ++ ++ Y A + E RL +P H + D G +P + V + + +
Sbjct: 318 --PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLS 374
Query: 412 TGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+ + + F P +L ++G + + F+ F+ G RICLG+ +A ++
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGA---LKRNEGFMPFSLGKRICLGEGIARTEL 427
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 136/361 (37%), Gaps = 61/361 (16%)
Query: 144 RQAMARWVSRAIMLRFCPILDSAQLKAD-PVDLQDLLLRLTFDNICGLAFGKDPQT---- 198
R +M WV + + FC + +++A PV +Q LT IC L FG T
Sbjct: 133 RSSMEPWVDQ-LTQEFC---ERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHA 188
Query: 199 ---CAPGLPENGFASAFDRATEASLQRFILPEILWKAK-----------KWLRLGMEVSL 244
C L + + RF LW+ K K LR E +
Sbjct: 189 FHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMV 248
Query: 245 SRSLGHIDEY-LSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFI 303
+ + +Y L V R E Q +G+ H ++ F
Sbjct: 249 AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLF-------------------- 288
Query: 304 LAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRL 363
+ G +T+++ LSW ++ +P ++ ++ EL L T+ D RL
Sbjct: 289 IGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDR-------ARL 341
Query: 364 IYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDC 423
L A ++E LRL P VP H G +P G V ++ + W +
Sbjct: 342 PLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQP 400
Query: 424 LEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVV 483
EFRP+R+L + AF G R+CLG+ LA L++ V A +L T++
Sbjct: 401 HEFRPDRFLEPGANPSAL-------AFGCGARVCLGESLARLELFVVLARLL--QAFTLL 451
Query: 484 P 484
P
Sbjct: 452 P 452
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 305 AGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLI 364
G +T+S L W + + ++ +V++ + E+ + + GD + PL
Sbjct: 287 GGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPL--------- 337
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
LKA++ ETLRL+P ++ D +L D +PA + V +IYA GR + +
Sbjct: 338 -LKASIKETLRLHPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFSSPD- 394
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+F P RWLS D K +H F+ + F G R C+G+ +A L+M
Sbjct: 395 KFDPTRWLSKD--KDLIH--FRNLGFGWGVRQCVGRRIAELEM 433
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 305 AGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLI 364
A +DT S AL W L + P V+ ++ EL V+ D D+P L
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR---DRLPCMGDQP-------NLP 339
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y+ A L E +R VP H + G +P + V + ++ W +
Sbjct: 340 YVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNP-E 398
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVP 484
F P R+L DG + + + F+ G R C+G++L+ +Q+ + + + P
Sbjct: 399 NFDPARFLDKDGL-INKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANP 457
Query: 485 GHKVEQKMSLTLFMK-NGLKVNVHTRE----LEGIVQSIKKRKKNNCMH 528
+ S L +K KVNV RE L+ VQ+++ K C H
Sbjct: 458 NEPAKMNFSYGLTIKPKSFKVNVTLRESMELLDSAVQNLQ--AKETCQH 504
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 299 ALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFE 358
A+ ++AG +T ++AL+W F L+ P + ++ +
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 359 ELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRST 418
AA E LRLYP ++ + +L + +P G+++ S Y T R+
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDR-LPPGTTLVLSPYVTQRLHFP 305
Query: 419 WGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
G+ FRPER+L GT S ++ F G R+CLG+D A L+ V A R
Sbjct: 306 DGE---AFRPERFLEERGT-----PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
Query: 479 GLTVVPGHKVEQKMSL 494
L +P +V +++L
Sbjct: 358 RLDPLPFPRVLAQVTL 373
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 37/196 (18%)
Query: 299 ALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFE 358
A+ ++AG +T ++AL+W F L+ P + ++ +
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 359 ELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRST 418
AA E LRLYP ++ + +L + +P G+++ S Y T R+
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDR-LPQGTTLVLSPYVTQRLYFP 305
Query: 419 WGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRH 478
G+ F+PER+L+ GT S ++ F G R+CLG+D A L+ V A R
Sbjct: 306 EGE---AFQPERFLAERGT-----PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
Query: 479 GLTVVPGHKVEQKMSL 494
L +P +V +++L
Sbjct: 358 RLDPLPFPRVLAQVTL 373
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 276 HDDLLSRFMKKKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILREL 335
+ +++ + K E +A +K ++ DT++ L + + +NP V+ + +E
Sbjct: 260 YTGIVAELLLKAELSLEA-IKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQES 318
Query: 336 CSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPD 395
+ + PL L+AAL ETLRLYP V + V+ D++
Sbjct: 319 LAAAASISEHPQKATTELPL----------LRAALKETLRLYP-VGLFLERVVSSDLVLQ 367
Query: 396 GTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPR 455
+PAG+ V +Y+ GR + + + P+RWL G+ +F V F G R
Sbjct: 368 NYHIPAGTLVQVFLYSLGRNAALFPRPE-RYNPQRWLDIRGSG----RNFHHVPFGFGMR 422
Query: 456 ICLGK 460
CLG+
Sbjct: 423 QCLGR 427
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 148/385 (38%), Gaps = 55/385 (14%)
Query: 116 GEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKADPVDL 175
G GI S+G W R+ + + T R R C + + + KA P D
Sbjct: 90 GFGIVFSNGKKWKEIRRFSLM--TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDP 147
Query: 176 QDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQRFILPEILWKAKKW 235
+L + IC + F K + F + ++ E EIL + W
Sbjct: 148 TFILGCAPCNVICSIIFHKRFD-----YKDQQFLNLMEKLNENI-------EIL--SSPW 193
Query: 236 LRL------------GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRF 283
+++ G L +++ + Y+ + K++ + D N D + F
Sbjct: 194 IQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILE-----KVKEHQESMDMNNPQDFIDCF 248
Query: 284 MKKKE--------SYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILREL 335
+ K E +T L++ A++ AG +T+S L + L++++P V K+ E+
Sbjct: 249 LMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEI 308
Query: 336 CSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPD 395
V+ R ++ + Y A + E R +P H + D+
Sbjct: 309 ERVIGRNRSP----------CMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFR 358
Query: 396 GTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPR 455
+P G+++ S+ + + + + F P +L G S F+ F+AG R
Sbjct: 359 NYLIPKGTTILISLTSVLHDNKEFPNPEM-FDPHHFLDEGGN---FKKSKYFMPFSAGKR 414
Query: 456 ICLGKDLAYLQMKSVAAAVLLRHGL 480
IC+G+ LA +++ ++L L
Sbjct: 415 ICVGEALAGMELFLFLTSILQNFNL 439
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 146/385 (37%), Gaps = 55/385 (14%)
Query: 116 GEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIMLRFCPILDSAQLKADPVDL 175
G GI S+G W R+ + + T R R C + + + KA P D
Sbjct: 92 GFGIVFSNGKKWKEIRRFSLM--TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDP 149
Query: 176 QDLLLRLTFDNICGLAFGKDPQTCAPGLPENGFASAFDRATEASLQRFILPEILWKAKKW 235
+L + IC + F K + F + ++ E I + W
Sbjct: 150 TFILGCAPCNVICSIIFHKRFD-----YKDQQFLNLMEKLNE---------NIKILSSPW 195
Query: 236 LRL------------GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRF 283
+++ G L +++ + Y+ + K++ + D N D + F
Sbjct: 196 IQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILE-----KVKEHQESMDMNNPQDFIDCF 250
Query: 284 MKKKE--------SYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILREL 335
+ K E +T L++ A++ AG +T+S L + L++++P V K+ E+
Sbjct: 251 LMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEI 310
Query: 336 CSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPD 395
V+ R ++ + Y A + E R +P H + D+
Sbjct: 311 ERVIGRNRSP----------CMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFR 360
Query: 396 GTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPR 455
+P G+++ S+ + + + + F P +L G S F+ F+AG R
Sbjct: 361 NYLIPKGTTILISLTSVLHDNKEFPNPEM-FDPHHFLDEGGN---FKKSKYFMPFSAGKR 416
Query: 456 ICLGKDLAYLQMKSVAAAVLLRHGL 480
IC+G+ LA +++ ++L L
Sbjct: 417 ICVGEALAGMELFLFLTSILQNFNL 441
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 24/242 (9%)
Query: 239 GMEVSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES-----YTDA 293
G+ +L ++ +I ++ + + + L D N D + F+ K E +T
Sbjct: 210 GIHKTLLKNADYIKNFIMEKVKEHQKLL-----DVNNPRDFIDCFLIKMEQENNLEFTLE 264
Query: 294 FLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDE 353
L + AG +T+S L + L++++P V ++ E+ V+ R
Sbjct: 265 SLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSP-------- 316
Query: 354 PLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATG 413
++ R+ Y A + E R +P + H + D+ F+P G+ + S+ +
Sbjct: 317 --CMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVL 374
Query: 414 RMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAA 473
+ + + F P +L G F+ D F+ F+AG R+C+G+ LA +++ +
Sbjct: 375 HDEKAFPNPKV-FDPGHFLDESGN-FKKSDY--FMPFSAGKRMCVGEGLARMELFLFLTS 430
Query: 474 VL 475
+L
Sbjct: 431 IL 432
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 256 SDVINARKLELTSQQKDGNPHDDL---LSRFMKKKESYTDAF----LKHVALNFILAGRD 308
SD++ K E NP D + L + K+K++ F L A + + AG +
Sbjct: 225 SDILEKVK-EHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTE 283
Query: 309 TSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKA 368
T+S L + L++++P V K+ E+ V+ R ++ + Y A
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSP----------CMQDRGHMPYTDA 333
Query: 369 ALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRP 428
+ E R +P H + D+ +P G+++ S+ + + + + F P
Sbjct: 334 VVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEM-FDP 392
Query: 429 ERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
+L G S F+ F+AG RIC+G+ LA +++
Sbjct: 393 RHFLDEGGN---FKKSNYFMPFSAGKRICVGEGLARMEL 428
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 51/238 (21%)
Query: 242 VSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES--YTDAFLKHVA 299
V + + LG + +YL I RK+E P DDL S ++ D L+ +
Sbjct: 197 VKVEQGLGRMFDYLVAAIEKRKVE---------PGDDLTSDIVRAFHDGVLDDYELRTLV 247
Query: 300 LNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEE 359
++AG +T++ L+ + Q+P D+ + +E
Sbjct: 248 ATVLVAGYETTNHQLALAMYDFAQHP--------------------------DQWMKIKE 281
Query: 360 LDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTW 419
L A+ E LR P++P + V +D +G +P G+ V + R
Sbjct: 282 NPELA--PQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR----- 334
Query: 420 GDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
P + +D + +AF GP CLG LA L++ AA+ R
Sbjct: 335 -------DPRVFADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 51/238 (21%)
Query: 242 VSLSRSLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES--YTDAFLKHVA 299
V + + LG + +YL I RK+E P DDL S ++ D L+ +
Sbjct: 187 VKVEQGLGRMFDYLVAAIEKRKVE---------PGDDLTSDIVRAFHDGVLDDYELRTLV 237
Query: 300 LNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEE 359
++AG +T++ L+ + Q+P D+ + +E
Sbjct: 238 ATVLVAGYETTNHQLALAMYDFAQHP--------------------------DQWMKIKE 271
Query: 360 LDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTW 419
L A+ E LR P++P + V +D +G +P G+ V + R
Sbjct: 272 NPELA--PQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR----- 324
Query: 420 GDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
P + +D + +AF GP CLG LA L++ AA+ R
Sbjct: 325 -------DPRVFADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 286 KKESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGD 345
+K + L + +AG +T+S L + L++++P V K+ E+ V+ R
Sbjct: 260 QKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSP 319
Query: 346 DTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSV 405
++ + Y A + E R VP H + D +P G+++
Sbjct: 320 ----------CMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTI 369
Query: 406 TYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYL 465
+ + + + + F P +L +G F+ D F + F+AG RIC G+ LA +
Sbjct: 370 MALLTSVLHDDKEFPNPNI-FDPGHFLDKNGN-FKKSDYF--MPFSAGKRICAGEGLARM 425
Query: 466 QMKSVAAAVLLRHGLTVV 483
++ +L L V
Sbjct: 426 ELFLFLTTILQNFNLKSV 443
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 255 LSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAF----LKHVALNFILAGRDTS 310
++D++N R + + D + D L++ K E+ T F + + ++ + AG TS
Sbjct: 205 VADIMNGRIANPPTDKSDRDMLDVLIA---VKAETGTPRFSADEITGMFISMMFAGHHTS 261
Query: 311 SAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAAL 370
S SW ++++ ++ EL E GD S + F L ++ L+ L
Sbjct: 262 SGTASWTLIELMRHRDAYAAVIDELD----ELYGDGRS------VSFHALRQIPQLENVL 311
Query: 371 SETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPER 430
ETLRL+P + + V + G + G V S + R+ + D +F P R
Sbjct: 312 KETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH-DFVPAR 369
Query: 431 WLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ + ++ + + ++ F AG C+G A +Q+K++ +VLLR
Sbjct: 370 Y--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI-FSVLLR 413
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 255 LSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAF----LKHVALNFILAGRDTS 310
++D++N R + + D + D L++ K E+ T F + + ++ + AG TS
Sbjct: 205 VADIMNGRIANPPTDKSDRDMLDVLIA---VKAETGTPRFSADEITGMFISMMFAGHHTS 261
Query: 311 SAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAAL 370
S SW ++++ ++ EL E GD S + F L ++ L+ L
Sbjct: 262 SGTASWTLIELMRHRDAYAAVIDELD----ELYGDGRS------VSFHALRQIPQLENVL 311
Query: 371 SETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPER 430
ETLRL+P + + V + G + G V S + R+ + D +F P R
Sbjct: 312 KETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH-DFVPAR 369
Query: 431 WLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ + ++ + + ++ F AG C+G A +Q+K++ +VLLR
Sbjct: 370 Y--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI-FSVLLR 413
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 255 LSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAF----LKHVALNFILAGRDTS 310
++D++N R + + D + D L++ K E+ T F + + ++ + AG TS
Sbjct: 205 VADIMNGRIANPPTDKSDRDMLDVLIA---VKAETGTPRFSADEITGMFISMMFAGHHTS 261
Query: 311 SAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAAL 370
S SW ++++ ++ EL E GD S + F L ++ L+ L
Sbjct: 262 SGTASWTLIELMRHRDAYAAVIDELD----ELYGDGRS------VSFHALRQIPQLENVL 311
Query: 371 SETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPER 430
ETLRL+P + + V + G + G V S + R+ + D +F P R
Sbjct: 312 KETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH-DFVPAR 369
Query: 431 WLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ + ++ + + ++ F AG C+G A +Q+K++ +VLLR
Sbjct: 370 Y--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI-FSVLLR 413
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 255 LSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAF----LKHVALNFILAGRDTS 310
++D++N R + + D + D L++ K E+ T F + + ++ + AG TS
Sbjct: 205 VADIMNGRIANPPTDKSDRDMLDVLIA---VKAETGTPRFSADEITGMFISMMFAGHHTS 261
Query: 311 SAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAAL 370
S SW ++++ ++ EL E GD S + F L ++ L+ L
Sbjct: 262 SGTASWTLIELMRHRDAYAAVIDELD----ELYGDGRS------VSFHALRQIPQLENVL 311
Query: 371 SETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPER 430
ETLRL+P + + V + G + G V S + R+ + D +F P R
Sbjct: 312 KETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH-DFVPAR 369
Query: 431 WLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ + ++ + + ++ F AG C+G A +Q+K++ +VLLR
Sbjct: 370 Y--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI-FSVLLR 413
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 322
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 323 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 375
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 376 YDVPDQDLSIDFARLPALPKSGFVMRNVH 404
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 322
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 323 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 375
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 376 YDVPDQDLSIDFARLPALPKSGFVMRNVH 404
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 322
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 323 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 375
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 376 YDVPDQDLSIDFARLPALPKSGFVMRNVH 404
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 330
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 331 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 383
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 384 YDVPDQDLSIDFARLPALPKSGFVMRNVH 412
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 330
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 331 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 383
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 384 YDVPDQDLSIDFARLPALPKSGFVMRNVH 412
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 365 YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCL 424
Y + + E R YP P D +G P G V +Y + +TW D
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP-Q 330
Query: 425 EFRPERWLSSDGTKFEMHDSFKFVAFNAGPRI----CLGKDLAYLQMKSVAAAVLLRHGL 480
EFRPER+ + D DSF F+ G C G+ + MK VAA +L+
Sbjct: 331 EFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK-VAAHLLVNAMR 383
Query: 481 TVVPGHKVEQKMS-LTLFMKNGLKV-NVH 507
VP + + L K+G + NVH
Sbjct: 384 YDVPDQDLSIDFARLPALPKSGFVMRNVH 412
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 59/250 (23%)
Query: 247 SLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES----YTDAFLKHVALNF 302
++ + YLS +I++++ G +DLLS ++ + T L +A
Sbjct: 210 AMAEMSGYLSRLIDSKR---------GQDGEDLLSALVRTSDEDGSRLTSEELLGMAHIL 260
Query: 303 ILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
++AG +T+ ++ + ++ +P L R D
Sbjct: 261 LVAGHETTVNLIANGMYALLSHP-----------DQLAALRAD----------------- 292
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDD 422
+ L A+ E LR V + V+ + DGT +PAG +V + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRT------- 345
Query: 423 CLEFRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR---H 478
PER+ D +F++ D+ +AF G C+G LA L+ + A+L R
Sbjct: 346 -----PERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL 398
Query: 479 GLTVVPGHKV 488
L V PG V
Sbjct: 399 ALDVSPGELV 408
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 59/250 (23%)
Query: 247 SLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES----YTDAFLKHVALNF 302
++ + YLS +I++++ G +DLLS ++ + T L +A
Sbjct: 210 AMAEMSGYLSRLIDSKR---------GQDGEDLLSALVRTSDEDGSRLTSEELLGMAHIL 260
Query: 303 ILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
++AG +T+ ++ + ++ +P L R D
Sbjct: 261 LVAGHETTVNLIANGMYALLSHP-----------DQLAALRAD----------------- 292
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDD 422
+ L A+ E LR V + V+ + DGT +PAG +V + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRT------- 345
Query: 423 CLEFRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR---H 478
PER+ D +F++ D+ +AF G C+G LA L+ + A+L R
Sbjct: 346 -----PERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL 398
Query: 479 GLTVVPGHKV 488
L V PG V
Sbjct: 399 ALDVSPGELV 408
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 59/250 (23%)
Query: 247 SLGHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKES----YTDAFLKHVALNF 302
++ + YLS +I++++ G +DLLS ++ + T L +A
Sbjct: 210 AMAEMSGYLSRLIDSKR---------GQDGEDLLSALVRTSDEDGSRLTSEELLGMAHIL 260
Query: 303 ILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
++AG +T+ ++ + ++ +P L R D
Sbjct: 261 LVAGHETTVNLIANGMYALLSHP-----------DQLAALRAD----------------- 292
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDD 422
+ L A+ E LR V + V+ + DGT +PAG +V + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRT------- 345
Query: 423 CLEFRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR---H 478
PER+ D +F++ D+ +AF G C+G LA L+ + A+L R
Sbjct: 346 -----PERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL 398
Query: 479 GLTVVPGHKV 488
L V PG V
Sbjct: 399 ALDVSPGELV 408
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 370 LSETLRLYPSVPE-DSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRP 428
+ ETLR P+V ++ + D LPDG + G + S YA W +D F
Sbjct: 279 VEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILAS-YAAANRHPDWHEDADTFDA 337
Query: 429 ERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQM 467
R + + +AF G CLG LA +++
Sbjct: 338 TRTVK------------EHLAFGHGVHFCLGAPLARMEV 364
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 249 GHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA--- 305
+ + L ++I AR+ E S KD N DLL +K H I+A
Sbjct: 211 AELQKILGEIIVAREKEEAS--KDNN-TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMF 267
Query: 306 -GRDTSSAALSWFFWLVI--QNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
G+ TS+ SW ++ +N DK+ +E+ + D+ +D
Sbjct: 268 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDE 315
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGD 421
+ + + + E++R P + + V + + G++V P G + S + + +
Sbjct: 316 MPFAERCVRESIRRDPPLLMVMRMVKAEVKV--GSYVVPKGDIIACSPLLSHHDEEAFPN 373
Query: 422 DCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
L + PER DG F+ F AG C+G+ A LQ+K++ A
Sbjct: 374 PRL-WDPERDEKVDGA---------FIGFGAGVHKCIGQKFALLQVKTILATAF 417
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 249 GHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA--- 305
+ + L ++I AR+ E S KD N DLL +K H I+A
Sbjct: 205 AELQKILGEIIVAREKEEAS--KDNN-TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMF 261
Query: 306 -GRDTSSAALSWFFWLVI--QNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
G+ TS+ SW ++ +N DK+ +E+ + D+ +D
Sbjct: 262 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDE 309
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGD 421
+ + + + E++R P + + V + + G++V P G + S + + +
Sbjct: 310 MPFAERCVRESIRRDPPLLMVMRMVKAEVKV--GSYVVPKGDIIACSPLLSHHDEEAFPN 367
Query: 422 DCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
L + PER DG F+ F AG C+G+ A LQ+K++ A
Sbjct: 368 PRL-WDPERDEKVDGA---------FIGFGAGVHKCIGQKFALLQVKTILATAF 411
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 249 GHIDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA--- 305
+ + L ++I AR+ E S KD N DLL +K H I+A
Sbjct: 220 AELQKILGEIIVAREKEEAS--KDNN-TSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMF 276
Query: 306 -GRDTSSAALSWFFWLVI--QNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDR 362
G+ TS+ SW ++ +N DK+ +E+ + D+ +D
Sbjct: 277 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDE 324
Query: 363 LIYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGD 421
+ + + + E++R P + + V + + G++V P G + S + + +
Sbjct: 325 MPFAERCVRESIRRDPPLLMVMRMVKAEVKV--GSYVVPKGDIIACSPLLSHHDEEAFPN 382
Query: 422 DCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
L + PER DG F+ F AG C+G+ A LQ+K++ A
Sbjct: 383 PRL-WDPERDEKVDGA---------FIGFGAGVHKCIGQKFALLQVKTILATAF 426
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 80/214 (37%), Gaps = 51/214 (23%)
Query: 270 QKDGNPHDDLLSRFMKKKESYTDAFLKH-----VALNFILAGRDTSSAALSWFFWLVIQN 324
+K P D LL + ++ D L H +AL ++AG +T+ A++ +IQ+
Sbjct: 205 RKQAEPEDGLLDELIARQLEEGD--LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQH 262
Query: 325 PHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDS 384
P D +LR+ +V + + E L + SV +
Sbjct: 263 PEQIDVLLRDPGAV-----------------------------SGVVEELLRFTSVSDHI 293
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGD-DCLEFRPERWLSSDGTKFEMHD 443
+ +D+ G + AG +V SI R + + D + R +
Sbjct: 294 VRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDAR--------------RN 339
Query: 444 SFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ V F G CLG++LA +++ + R
Sbjct: 340 ARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR 373
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----G 306
+ + LS++I ARK E ++ + DLLS + H I+A G
Sbjct: 209 LQKILSEIIIARKEEEVNKDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 265
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ TSS +W ++ +V K L L + E V +D + +
Sbjct: 266 QHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFA 315
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLE 425
+ E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP 368
Query: 426 FRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 369 -EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 413
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----G 306
+ + LS++I ARK E ++ + DLLS + H I+A G
Sbjct: 208 LQKILSEIIIARKEEEVNKDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 264
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ TSS +W ++ +V K L L + E V +D + +
Sbjct: 265 QHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFA 314
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLE 425
+ E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 315 ERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP 367
Query: 426 FRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 368 -EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 412
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----G 306
+ + LS++I ARK E ++ + DLLS + H I+A G
Sbjct: 210 LQKILSEIIIARKEEEVNKDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 266
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ TSS +W ++ +V K L L + E V +D + +
Sbjct: 267 QHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFA 316
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLE 425
+ E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 317 ERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP 369
Query: 426 FRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 370 -EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 414
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----G 306
+ + LS++I ARK E ++ + DLLS + H I+A G
Sbjct: 209 LQKILSEIIIARKEEEVNKDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 265
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ TSS +W ++ +V K L L + E V +D + +
Sbjct: 266 QHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFA 315
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLE 425
+ E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP 368
Query: 426 FRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 369 -EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 413
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 46/213 (21%)
Query: 269 QQKDGNPHDDLLSRFMKKKES----YTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQN 324
+++ P DDLLS ++ ++ + L +AL +LAG +TS + + +L++ +
Sbjct: 201 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTH 260
Query: 325 PHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDS 384
P L R D ++ L A+ E LR Y + PE +
Sbjct: 261 P-----------DQLALVRRDPSA-----------------LPNAVEEILR-YIAPPETT 291
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDS 444
+++ G +P S+V + A R + D P R+ D T+ D+
Sbjct: 292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD------PHRF---DVTR----DT 338
Query: 445 FKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
++F G C+G+ LA L+ + A+ R
Sbjct: 339 RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHDDLLSRFMKKKESYTDAFLKHVALNFILA----G 306
+ + LS++I ARK E ++ + DLLS + H I+A G
Sbjct: 222 LQKILSEIIIARKEEEVNKDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 278
Query: 307 RDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYL 366
+ TSS +W ++ +V K L L + E V +D + +
Sbjct: 279 QHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFA 328
Query: 367 KAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLE 425
+ E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 329 ERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP 381
Query: 426 FRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 382 -EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 426
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 86/232 (37%), Gaps = 53/232 (22%)
Query: 249 GHIDEYLSDVINA-------RKLELTSQQKDGNPHDDLLSRFMKK-KESYTDAFLKHVAL 300
GH+D LS A R L ++ P + ++ + + + TD L+ +
Sbjct: 172 GHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCV 231
Query: 301 NFILAGRDTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEEL 360
+LAG D S + ++++P D RGD+ S +
Sbjct: 232 QVMLAGDDNISGMIGLGVLAMLRHPEQIDAF-----------RGDEQSAQ-------RAV 273
Query: 361 DRLI-YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTW 419
D LI YL S T R + +D+ G + G SV S+ A R
Sbjct: 274 DELIRYLTVPYSPTPR-----------IAREDLTLAGQEIKKGDSVICSLPAANR----- 317
Query: 420 GDDCLEFRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSV 470
+ L+ D + ++ + VAF G CLG LA L++++V
Sbjct: 318 ---------DPALAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTV 360
>pdb|3UJH|A Chain A, Crystal Structure Of Substrate-Bound Glucose-6-Phosphate
Isomerase From Toxoplasma Gondii
pdb|3UJH|B Chain B, Crystal Structure Of Substrate-Bound Glucose-6-Phosphate
Isomerase From Toxoplasma Gondii
Length = 567
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 154 AIMLRFCPILDSAQLKADPVDLQDLLLRLTFDNICGLAFGKDPQTC-APGLPE 205
A + FC + +LK +PV D L+ F LAFGK P+ G+PE
Sbjct: 412 AEFIGFCKSQRAIKLKEEPVSNHDELMSNFFAQPDALAFGKTPEELRKEGIPE 464
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 49/242 (20%)
Query: 269 QQKDGNPHDDLLSRFMKKKES---YTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNP 325
Q++ NP DDL+S + ++ D FL + A ++A DT++ + L++ +P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 326 HVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSK 385
+ +LRE S+ + A+ E LR +
Sbjct: 258 D-QLALLREDPSL---------------------------VGNAVEELLRYLTIGQFGGE 289
Query: 386 HVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSF 445
V D+ G + G V + A D PER+ D T+
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADF------DPAFVEEPERF---DITR----RPA 336
Query: 446 KFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGLKVN 505
+AF G C+G+ LA ++++ V + R +PG ++ + + F + +
Sbjct: 337 PHLAFGFGAHQCIGQQLARIELQIVFETLFRR-----LPGLRLAKPVEELRFRHDMVFYG 391
Query: 506 VH 507
VH
Sbjct: 392 VH 393
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 33/234 (14%)
Query: 249 GHIDEYLSDVINARKLELTSQQKDGNPHD---DLLSRFMKKKESYTDAFLKHVALNFILA 305
+ + LS++I AR+ E QKD N D LL + + + + + + A
Sbjct: 206 AELQDILSEIIIAREKE--EAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFA 263
Query: 306 GRDTSSAALSWFFWLVI--QNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRL 363
G+ TS+ +W ++ +N K+ +E+ + D+ ++ +
Sbjct: 264 GQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYDNV------------MEEM 311
Query: 364 IYLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDD 422
+ + E++R P + + V+ + G +V P G + S + + + +
Sbjct: 312 PFAEQCARESIRRDPPLVMLMRKVLKPVQV--GKYVVPEGDIIACSPLLSHQDEEAFPNP 369
Query: 423 CLEFRPERWLS-SDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
E+ PER + DG F F AG C+G+ LQ+K+V A VL
Sbjct: 370 -REWNPERNMKLVDGA---------FCGFGAGVHKCIGEKFGLLQVKTVLATVL 413
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 49/242 (20%)
Query: 269 QQKDGNPHDDLLSRFMKKKES---YTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNP 325
Q++ NP DDL+S + ++ D FL + A ++A DT++ + L++ +P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 326 HVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSK 385
+ +LRE S+ + A+ E LR +
Sbjct: 258 D-QLALLREDPSL---------------------------VGNAVEELLRYLTIGQFGGE 289
Query: 386 HVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSF 445
V D+ G + G V + A D PER+ D T+
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADF------DPAFVEEPERF---DITR----RPA 336
Query: 446 KFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGLKVN 505
+AF G C+G+ LA ++++ V + R +PG ++ + + F + +
Sbjct: 337 PHLAFGFGAHQCIGQQLARIELQIVFETLFRR-----LPGLRLAKPVEELRFRHDMVFYG 391
Query: 506 VH 507
VH
Sbjct: 392 VH 393
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 28/229 (12%)
Query: 251 IDEYLSDVINARKLELTSQQKDGNPHD---DLLSRFMKKKESYTDAFLKHVALNFILAGR 307
+ + LS++I ARK + KD + D LLS + + + + + + AG+
Sbjct: 222 LQKILSEIIIARKA--AAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 279
Query: 308 DTSSAALSWFFWLVIQNPHVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLK 367
TSS +W ++ +V K L L + E V +D + + +
Sbjct: 280 HTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNV--------MDEMPFAE 329
Query: 368 AALSETLRLYPSVPEDSKHVIVDDMLPDGTFV-PAGSSVTYSIYATGRMRSTWGDDCLEF 426
E++R P + + V+ D + G++V P G I A + S ++
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGD-----IIACSPLLSHHDEEAFP- 381
Query: 427 RPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVL 475
P RW K E F+ F AG C+G+ LQ+K++ A
Sbjct: 382 EPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTILATAF 426
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 269 QQKDGNPHDDLLSRFMKKKES---YTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNP 325
Q++ NP DDL+S + ++ D FL + A ++A DT++ + L++ +P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 326 HVEDKILRELCSVL 339
+ +LRE S++
Sbjct: 258 D-QLALLREDPSLV 270
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 387 VIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFK 446
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN-P 342
Query: 447 FVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 387 VIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFK 446
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN-P 342
Query: 447 FVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 387 VIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFK 446
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN-P 342
Query: 447 FVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 387 VIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFK 446
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN-P 342
Query: 447 FVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 387 VIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFK 446
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 296 IALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN-P 342
Query: 447 FVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 366 LKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLE 425
+ +A E LR V + V + D+ G + AG +T S+ AT R
Sbjct: 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR----------- 307
Query: 426 FRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ G +F++ + +AF G C+G LA LQ++ AV+ R
Sbjct: 308 --------APGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGR 352
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 18/118 (15%)
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDS 444
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 294 SRIALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN 341
Query: 445 FKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 342 -PHVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 18/118 (15%)
Query: 385 KHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDS 444
+ ++D+ G + AG +V S A R PE + D FE +
Sbjct: 294 SRIALEDVEIKGVRIRAGDAVYVSYLAANR------------DPEVFPDPDRIDFERSPN 341
Query: 445 FKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHGLTVVPGHKVEQKMSLTLFMKNGL 502
V+F GP C G LA L+ + + AVL R VPG K+ F K L
Sbjct: 342 -PHVSFGFGPHYCPGGMLARLESELLVDAVLDR-----VPGLKLAVAPEDVPFKKGAL 393
>pdb|4GRX|A Chain A, Structure Of An Omega-Aminotransferase From Paracoccus
Denitrificans
pdb|4GRX|B Chain B, Structure Of An Omega-Aminotransferase From Paracoccus
Denitrificans
pdb|4GRX|C Chain C, Structure Of An Omega-Aminotransferase From Paracoccus
Denitrificans
pdb|4GRX|D Chain D, Structure Of An Omega-Aminotransferase From Paracoccus
Denitrificans
Length = 465
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 413 GRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAA 472
GR +TWG +F P+ +SS + F A + LG DLA +V A
Sbjct: 275 GRTGNTWGCLTYDFMPDAIISSXNL------TAGFFPMGA---VILGPDLAKRVEAAVEA 325
Query: 473 AVLLRHGLTVVPGHKVEQKMSLT---LFMKNGLKVNV 506
HG T GH V ++L + M GL NV
Sbjct: 326 IEEFPHGFT-ASGHPVGCAIALKAIDVVMNEGLAENV 361
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 366 LKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLE 425
+ +A E LR V + V + D+ G + AG +T S+ AT R
Sbjct: 292 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR----------- 340
Query: 426 FRPERWLSSDGTKFEM-HDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
+ G +F++ + +AF G C+G LA LQ++ AV+ R
Sbjct: 341 --------APGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGR 385
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 47/212 (22%)
Query: 270 QKDGNPHDDLLSRFMKKK----ESYTDAFLKHVALNFILAGRDTSSAALSWFFWLVIQNP 325
++ P DDL+S+ + T+ L + + I AGR+T+++ ++ L++ P
Sbjct: 211 ERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGIT-INAGRETTTSMIALSTLLLLDRP 269
Query: 326 HVEDKILRELCSVLIETRGDDTSTWVDEPLGFEELDRLIYLKAALSETLRLYPSVPEDSK 385
+ E R D + AA+ E LR+
Sbjct: 270 ELP-----------AELRKDPD-----------------LMPAAVDELLRVLSVADSIPL 301
Query: 386 HVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPERWLSSDGTKFEMHDSF 445
V +D+ G VPA V + PE++ + F D+
Sbjct: 302 RVAAEDIELSGRTVPADDGVIALLAGAN------------HDPEQFDDPERVDFHRTDNH 349
Query: 446 KFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
VAF G C+G+ LA L+++ VA LLR
Sbjct: 350 H-VAFGYGVHQCVGQHLARLELE-VALETLLR 379
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 367 KAALSETLRLYPSVPEDSKHVIV----DDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDD 422
A + ETLR S P + HV++ +D+ +PAG ++ S A GR G
Sbjct: 276 SAVVEETLRF--STP--TSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPT 331
Query: 423 CLEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR--HGL 480
F R + + ++F GP +C G L+ ++ A+ R H
Sbjct: 332 ADRFDLTRTSGN-----------RHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLD 380
Query: 481 TVVPGHKVEQKMSLT 495
VP ++ K +T
Sbjct: 381 LAVPAAELRNKPVVT 395
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 69/174 (39%), Gaps = 34/174 (19%)
Query: 321 VIQNPHVE------DKILRELCSVLIETRGDDTSTWVDEPLGFEEL-------DRLI--- 364
V+ N VE D+I+ E +LI G D +T G E+L D L+
Sbjct: 207 VLVNSEVEGQRMSDDEIVFETLLILI---GGDETTRHTLSGGTEQLLRHRDQWDALVADV 263
Query: 365 -YLKAALSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDC 423
L A+ E LR V + + D + GT + AG + + S +GD
Sbjct: 264 DLLPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLMFESANFDESVFGDPD 322
Query: 424 LEFRPERWLSSDGTKFEMHDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLR 477
FR +R +S VAF G CLG LA L+++ + VL R
Sbjct: 323 -NFRIDRNPNS------------HVAFGFGTHFCLGNQLARLELRLMTERVLRR 363
>pdb|4IR0|A Chain A, Crystal Structure Of Metallothiol Transferase Fosb 2 From
Bacillus Anthracis Str. Ames
pdb|4IR0|B Chain B, Crystal Structure Of Metallothiol Transferase Fosb 2 From
Bacillus Anthracis Str. Ames
Length = 148
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 474 VLLRHGLTVVPGHKVEQKMSLTLFMKN--GLKVNVHTRELEGIVQSIKKRKKNNCMHLSG 531
VL+++ + ++PG + +++ +L+ + G K HT L+ ++ K+ KK+ +++G
Sbjct: 83 VLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTGTLQNRLEYYKEDKKHXTFYIAG 142
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 370 LSETLRLYPSVPEDSKHVIVDDMLPDGTFVPAGSSVTYSIYATGRMRSTWGDDCLEFRPE 429
+ E R YP P ++ D + + G+SV +Y T W D EFRPE
Sbjct: 280 VQEVRRYYPFGPFLGA-LVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPE 337
Query: 430 RWLSSDGTKFEM 441
R+ + F+M
Sbjct: 338 RFAEREENLFDM 349
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a
pdb|3LNI|B Chain B, Crystal Structure Of E-Cadherin Ec12 E89a
Length = 213
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 87 PKNIEHILKHRFDNYPKGPTWQAVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQA 146
PKN+ I +R D K VF+ + G+G ++ +R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNR-DKETK------VFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 147 MARWVSRAIMLRFCPILDSAQLKADPVDL 175
+A+++ L + + + ADP+++
Sbjct: 71 IAKYI-----LYSHAVSSNGEAVADPMEI 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,597,096
Number of Sequences: 62578
Number of extensions: 703967
Number of successful extensions: 2083
Number of sequences better than 100.0: 125
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 1870
Number of HSP's gapped (non-prelim): 141
length of query: 539
length of database: 14,973,337
effective HSP length: 104
effective length of query: 435
effective length of database: 8,465,225
effective search space: 3682372875
effective search space used: 3682372875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)