BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009239
(539 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255566961|ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 530
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/535 (51%), Positives = 361/535 (67%), Gaps = 11/535 (2%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
MEE++QKRNTDCVYFLASPLTCKKGL+CEYRHNEIARLNPRDCWYWLAG+C NP C FRH
Sbjct: 3 MEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRH 62
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGK 120
PPL+ H E P E S SS+P NKT++PCYF+FNGFC++GDRC F+HGP+ + GK
Sbjct: 63 PPLEMHA-EGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGK 117
Query: 121 SSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
S ++SA+ +++ ++K S G+ T S PTE+ NPSE K D+++QP AP+
Sbjct: 118 SGSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPE 177
Query: 181 RIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERL 240
+ R SPQI++S+ E ++ ++ F +++S YT S +E DDHVEPEER
Sbjct: 178 KTVMRSPSPQIAVSQSEEAVILNPSFLLKVNSFTESRSLAYTTQSPEEEMDDHVEPEERW 237
Query: 241 ESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPES 300
ESSPGFDVLVD +++ENL +EDD EYLL + E R+ N FLGYDFE +EYD Y ++
Sbjct: 238 ESSPGFDVLVD--DKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDHAYHDA 295
Query: 301 EPHEGE-TYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDDCN-AD 358
E G Y+ + DN HI D V G +R + DS+LS+KRKL M++S++D D
Sbjct: 296 EDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQRIVD 355
Query: 359 LRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGR-HRGLLLHGRLASEFGKNYIESHGH 417
LRD L K R + GH+++ S+RRH SS L+G QGR HG+L E IE H
Sbjct: 356 LRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPGSNQRPHGKLVLEVKSTAIEPHRK 415
Query: 418 KGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFT 477
G+ G N HGW RHS+SN RQ K +RL +++S S + RKP S ER+SSQ T FT
Sbjct: 416 NGSQLYGGNDHGWLRHSRSNRSRQRDKERRLARKQSLSSEVLRKPASKERKSSQASTQFT 475
Query: 478 GPKSLAEIREEKKKAEESGGHFGKVGHLSRTLT-DFQGPKPLSEILKEKRRPGTV 531
GPK+LA+I+EEKKKAEE+G + GK + SR T DF+ PKPLSEILK+KRRP +
Sbjct: 476 GPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSEILKDKRRPSSA 530
>gi|297738926|emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/536 (55%), Positives = 365/536 (68%), Gaps = 39/536 (7%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
ME+ELQKRNTDCVYFLASPLTCKKG+DCEYRH+E ARLNPRDCWYWL+G+C+NP C FRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGK 120
PPLD H+ EA SE V+L SS+PVNKT+ PCYFY+NGFC++G+RCSFLHGPD
Sbjct: 61 PPLDGHI-EASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPDST----- 114
Query: 121 SSKSASAVTDSLLSENKTSAGDGTGSPPTEI--RPNPSEAPLKLAVDVRVQPKGHLLQSA 178
GT + PT I RPN E A++ + QPK L +
Sbjct: 115 ----------------------GTETGPTLIGRRPNSVETATVTAIETQFQPKEDLQKLV 152
Query: 179 PKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEE 238
K E+ +SPQIS+SE E A V+SDS++ AEGF +++S L TD SS+E D +EPEE
Sbjct: 153 FKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEE 212
Query: 239 RLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYP 298
R ESSPGFDVLVD N +ENL +ED+ EYLLA E RELNG FLGYDFE P+EYD MYP
Sbjct: 213 RWESSPGFDVLVD--NISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYP 270
Query: 299 ESEP-HEGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDD-CN 356
E+E ++ Y+ LDNEH D VR PG +RERILD +L RKRK FP++++V
Sbjct: 271 EAEILYDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSG 330
Query: 357 ADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHR--GL--LLHGRLASEFGKNYI 412
DLRD LRKRRV DGH++ +RRH+SS L+GR + R R G+ L GR ASE KN I
Sbjct: 331 LDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNII 390
Query: 413 ESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQT 472
TL N N+ GW R S+ RQH+K K +R+ S SRKP S ER S++
Sbjct: 391 GMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSEDSRKPVSRERISTRE 450
Query: 473 ETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLT-DFQGPKPLSEILKEKRR 527
T FTGPKSLA+I+EEK+KAEE+G FGK+G+ S T + DFQGPKPLSEILK+KR+
Sbjct: 451 YTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRK 506
>gi|147821409|emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
Length = 554
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 299/568 (52%), Positives = 366/568 (64%), Gaps = 45/568 (7%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
ME+ELQKRNTDCVYFLASPLTCKKG+DCEYRH+E ARLNPRDCWYWL+G+C+NP C FRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 61 P-----------------------PLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFN 97
P PLD H+ EA SE V+L SS+PVNKT+ PCYFY+N
Sbjct: 61 PVRVMLKRIQRDSRSGLLEEKVHLPLDGHI-EASSEPVTLSHHSSVPVNKTNTPCYFYYN 119
Query: 98 GFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSE 157
GFC++G+RCSFLHGPD AP KS K+AS V D EN AG TG RPN E
Sbjct: 120 GFCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVE 179
Query: 158 APLKLAVDVRVQPKGHLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTK 217
A++ + QPK L + K E+ +SPQIS+SE E A V+SDS++ AEGF +++
Sbjct: 180 TATVTAIETQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSR 239
Query: 218 SHLYTDWSSDEHADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRE 277
S L TD SS+E D +EPEER ESSPGFDVLVD N +ENL +ED+ EYLLA E RE
Sbjct: 240 SLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVD--NISENLVYEDEPEYLLALEGEGRE 297
Query: 278 LNGHFLGYDFEGPIEYDPMYPESEP-HEGETYNVHYYLDNEHILDKVREYPGRARERILD 336
LNG FLGYDFE P+EYD MYPE+E ++ Y+ LDNEH R
Sbjct: 298 LNGQFLGYDFEDPVEYDLMYPEAEILYDHRIYDSFDCLDNEH------------RREFWI 345
Query: 337 SMLSRKRKLFPMKVSVDD-CNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHR 395
KRK FP++++V DLRD LRKRRV DGH++ +RRH+SS L+GR + R R
Sbjct: 346 LFCPGKRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRR 405
Query: 396 --GL--LLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKR 451
G+ L GR ASE KN I TL N N+ GW R S+ RQH+K K +R
Sbjct: 406 RHGMDQQLQGRSASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQR 465
Query: 452 KSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLT- 510
+ S SRKP S ER S++ T FTGPKSLA+I+EEK+KAEE+G FGK+G+ S T +
Sbjct: 466 QHISSEDSRKPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSA 525
Query: 511 DFQGPKPLSEILKEKRRPGTVSDADTWS 538
DFQGPKPLSEILK+KR+ G+ D + S
Sbjct: 526 DFQGPKPLSEILKDKRKLGSAMDGNIIS 553
>gi|356513935|ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/544 (47%), Positives = 341/544 (62%), Gaps = 42/544 (7%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
M+++ KR TDCVYFLASPLTCKKG +CEYRHNEIARLNPRDCWYWL+G C+NP C FRH
Sbjct: 1 MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 61 PPLDAHV-TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG 119
PPLD H PSE P Q+S+P NKT +PCYF+FNG C++GDRCSFLHGPD
Sbjct: 61 PPLDGHTGASVPSE----PTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTV 116
Query: 120 KSSKSASAVTDSLLSENKTSAGDGTG--SPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQS 177
K K+ + TD+L ENKTS+G+ G S PT+ AP L+ D+++QPK
Sbjct: 117 KPVKNDNGSTDALNLENKTSSGNRIGLVSTPTD---QSVAAPKNLS-DLKLQPKEDHQLE 172
Query: 178 APKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPE 237
PK + ++ ++S SE + AV +SDS + +GF+ HL T+ SS+E + H+EPE
Sbjct: 173 IPKDVKQQGYYLELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTEQSSEEQVNSHIEPE 232
Query: 238 ERLES---SPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYD 294
ER ES SPGFDVLV +E +NLG+E+DSEY+ +R+ +EL+ + GY+F+ +EYD
Sbjct: 233 ERWESSPHSPGFDVLVHDE--VDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYD 290
Query: 295 PMYPESEP-HEGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVD 353
+ PE++ +E ETY+ + +LD I R R+ LD LSRKR +++
Sbjct: 291 TICPEADILYEQETYDGYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAAY 350
Query: 354 DCNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHRGLLLHG-------RLASE 406
D N DLRD+LR+RR + G + + RR ESS LM R Q RH+ HG RL S+
Sbjct: 351 DKNLDLRDHLRRRREIKGPPVSNFLRR-ESSPLMIRKQERHQR---HGIEQRPIRRLTSQ 406
Query: 407 FGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQH----HKGKRLLKRKSHLSAISRKP 462
G + I+S G GTL + AN+H RHS++ +QH H ++L KR+ S ISRKP
Sbjct: 407 LGYSAIDSIGEVGTL-SVANKHRLFRHSQA---QQHKPRKHYREKLPKRQFLSSKISRKP 462
Query: 463 FSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEIL 522
+R +AF+GPK+LAEI+EEK K E H+ T TDFQ PKPLSEIL
Sbjct: 463 AFKQRGFIHEFSAFSGPKTLAEIKEEKMKKAEGSLHW------KSTSTDFQDPKPLSEIL 516
Query: 523 KEKR 526
K+KR
Sbjct: 517 KDKR 520
>gi|356565193|ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 526
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/544 (47%), Positives = 331/544 (60%), Gaps = 40/544 (7%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
M+E+ KR TDCVYFLASPLTCKKG +CEYRHNEIARLNPRDCWYWL+G C+NP C FRH
Sbjct: 1 MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 61 PPLDAHV-TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG 119
PPLD H PSE P Q+S+P NKT +PCYF+FNGFC++GDRCSFLHGPD N
Sbjct: 61 PPLDGHTGAPVPSE----PTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNI 116
Query: 120 KSSKSASAVTDSLLSENKTSAGDGTG--SPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQS 177
K K+ + TD+L ENK +G+ TG S PT+ AP L+ D++ QPK
Sbjct: 117 KPVKNENGSTDALNLENKAPSGNRTGVTSTPTD---RSVAAPKNLS-DLKHQPKEDHQLE 172
Query: 178 APKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPE 237
PK + ++ ++S SE + AV +SDS + +GF+ HL T SS+E + H+EPE
Sbjct: 173 LPKNVKQQGDYLELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTGQSSEEQVNSHIEPE 232
Query: 238 ERLES---SPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYD 294
E ES SPGFDVLV +E ENLG+E+DSEYL +R+ +ELN + Y+F P+EYD
Sbjct: 233 EWWESSPHSPGFDVLVHDE--VENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYD 290
Query: 295 PMYPESEP-HEGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVD 353
+ PE++ +E ETY+ + LD + I R A + LD +LSRKR +++
Sbjct: 291 TICPEADILYEQETYDGYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAY 350
Query: 354 DCNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHRGLLLHG-------RLASE 406
D N DLRD+LR+RR V+G + RR ESS LM + Q RH L HG RL S+
Sbjct: 351 DKNLDLRDHLRRRREVNGPPVTGFLRRQESSPLMVQNQERH---LRHGIEQRPSRRLTSQ 407
Query: 407 FGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGK----RLLKRKSHLSAISRKP 462
G + I+S G TL G N+ R S++ +QH K +L KR+ S ISRKP
Sbjct: 408 LGYSAIDSTGEVETLSIG-NKRRLFRQSQA---QQHRPRKNYIEKLPKRQFVSSKISRKP 463
Query: 463 FSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEIL 522
+R + F+GPK+LAEI+EEK K G H T TDFQ PKPLSEIL
Sbjct: 464 VFKQRGLIHESSTFSGPKTLAEIKEEKMKKNAEGSL-----HWKSTSTDFQDPKPLSEIL 518
Query: 523 KEKR 526
K KR
Sbjct: 519 KVKR 522
>gi|449445373|ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
[Cucumis sativus]
gi|449487921|ref|XP_004157867.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
[Cucumis sativus]
Length = 721
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 276/580 (47%), Gaps = 84/580 (14%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDCW+WL GNC+NP+C FRHP
Sbjct: 24 EEEAIKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWLNGNCLNPKCSFRHP 83
Query: 62 PLDAHV---------TEAPSESVSLPCQSSIPVN--KTSIPCYFYFNGFCSRGDRCSFLH 110
PLD V ++ PS++ ++P S PVN K ++PC F+ G C +GDRC+FLH
Sbjct: 84 PLDGLVGTPHSTTPSSQIPSQTAAIP---STPVNSSKQAVPCIFFQKGLCLKGDRCAFLH 140
Query: 111 GPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQP 170
GP + N A+A S K S G S +I P + V++
Sbjct: 141 GPPSVQTNKVPQMGANAQAGEPPSVKKVSGGTQRSSQEQKI-PQANFLKSISGSSVKIAT 199
Query: 171 KGHLLQSAPKRIPERRASPQISLSEG-----ETVAVVKSDSMVAAEGFMKTKSHLYTD-- 223
K + S ++ E ++ P +++G T A+ + + +SH+ D
Sbjct: 200 KDETVPSKIGKLNE-KSIPPAEMADGGSRYKTTNALPTINECSLSRANRLQQSHVIDDHG 258
Query: 224 WSSDEHADDHVEPEERLESSPGFDVLVDNENRA-------ENLGFEDDSEYLLATNREHR 276
+ + AD+ ++ ESSPGFDVLVD+E R E G E T+
Sbjct: 259 LQNGKDADEFLK-----ESSPGFDVLVDDELRGSGYYGSEEQYGRSRGHEGGNMTSMNDY 313
Query: 277 ELNGHFLGYDFEGPIEYDPMYPESEPHEGETYNVHYYLDNEHILDKVREYPGRARERILD 336
++N H Y G +++D +Y ++ Y+ ++ D R + +++
Sbjct: 314 DIN-HSADYKMMGDVDHD-VY-----NDVTDYDYESRQGGQYGWDHRR----TSSDKLSL 362
Query: 337 SMLSRKRKLFPMKVSVDDC-NADLRDYLRKRRVVDG-HSIVHSTRRHESSRLMGR----- 389
S +R++FP S + N DLR L K+R +G S++++ + +SR R
Sbjct: 363 SSAQMERRIFPKSNSPEHVQNVDLRHRLNKQRRGNGLRSVINN--ENAASRPEERNYRSS 420
Query: 390 -----------IQGRHRGLLLHGRLASEFGKNYI--ESHGHKGTLPNGANQHGWARHSKS 436
+ R RG + R+ S + I E ++G P G + G ++ S S
Sbjct: 421 RRDSHSSQESTVSNRLRGRIKLPRIPSPVRSSDIRPERDLNRGR-PWGRSSPGRSQ-SLS 478
Query: 437 NILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESG 496
N + K L+ + + F+S R + + F PKSLAE++ +K +
Sbjct: 479 NQGSNRDEIKGRLEEDYNNERRTFNGFNSRRERTDGTSDFAAPKSLAELKGDKHIVSKEQ 538
Query: 497 GHFGKV---------GHLSRTLTDFQGPKPLSEILKEKRR 527
GK G LS F+GPK LSEILK KR+
Sbjct: 539 QTLGKRKGFDIDQSGGELS-----FEGPKSLSEILKRKRQ 573
>gi|224101995|ref|XP_002312505.1| predicted protein [Populus trichocarpa]
gi|222852325|gb|EEE89872.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 182/585 (31%), Positives = 272/585 (46%), Gaps = 76/585 (12%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
+E+E KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL GNC+NP+CGFRH
Sbjct: 5 VEDEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCYYWLNGNCLNPKCGFRH 64
Query: 61 PPLDAHV-TEA--------PSESVSLPCQSSIPVN--KTSIPCYFYFNGFCSRGDRCSFL 109
PPLD T+A P ++ + P N K ++PC F+ G C +GD+C+F
Sbjct: 65 PPLDGLFGTQAIASAGSSLPPSHTAVASATHAPHNPGKQAVPCIFFQQGICVKGDKCAFS 124
Query: 110 HGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQ 169
HGP+ +A N S A L K G + +I ++ +
Sbjct: 125 HGPN-LAGNKVSQPMAPTPGAEALPPKKAFGGLQKCAQEHKIPQTKISKAVEAPSVAKPV 183
Query: 170 PKGHLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEH 229
K ++ + R A P S+ +GE ++ + G + S L+ +D+H
Sbjct: 184 SKAEIVHARNIAGVVRSAVPPTSM-DGEIPRYKAANLPLMVNGNLSRSSRLHQLQVADDH 242
Query: 230 A-DDHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDF 287
+ + +E L ESSPGFDVLVDNE R + + + + T E R LN YD
Sbjct: 243 VIQNGKDADEYLRESSPGFDVLVDNELRDSDY-YHGEEQLGRTTGNEGRNLNS-VDEYDT 300
Query: 288 EGPIEYDPMYPESEPH-EGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLF 346
+Y ++ + E + + Y+ + +H ++ R + ER+L + + +R+ +
Sbjct: 301 GHSADYGLLHDDQEMYRDPRGYDSYELTPGQHAWEQHRA----SSERMLMAPVLPERRGY 356
Query: 347 PMKVSVDDC-NADLRDYLRKRRVVDG-HSIVH----------------STRR-------H 381
S + +DLR L K+R V+G S+V S+RR H
Sbjct: 357 AKADSPEHTEESDLRYRLSKQRRVNGLRSVVSNDFVPENHVEERGYRGSSRRDSHQLPSH 416
Query: 382 ESSRLMGRIQGRHRGLLLHGRLASEFG----KNYIESHGHKGTL-----PNGANQHGWAR 432
ESS + R++GR + L GR + G + I+ ++G L P + Q
Sbjct: 417 ESS-ISSRLRGR---IKLPGRSPNNGGDVRAEREIDRGRNRGRLSPVRSPVTSQQGRLRD 472
Query: 433 HSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKA 492
K+ + +++G+ R P T F GPKSLAE++ K
Sbjct: 473 RMKARVEEDYNEGRSF-----------RGPQVRGELMDDGSTDFAGPKSLAELKGGKNAE 521
Query: 493 EESGGHFGKVGH-----LSRTLTDFQGPKPLSEILKEKRRPGTVS 532
+ GK H S + F+GP PLSEILK KR G +
Sbjct: 522 GKLQQSLGKRKHSEDNPSSDAVLSFEGPMPLSEILKRKREGGAAA 566
>gi|357477999|ref|XP_003609285.1| Immunoglobulin G binding protein A [Medicago truncatula]
gi|355510340|gb|AES91482.1| Immunoglobulin G binding protein A [Medicago truncatula]
Length = 594
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 97/115 (84%), Gaps = 7/115 (6%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
M+E+ QKRNTDCVYFLASPLTCKKG++CEYRH+EIARLNPRDCWYWL+GNC+NP C FRH
Sbjct: 1 MDEDFQKRNTDCVYFLASPLTCKKGVECEYRHHEIARLNPRDCWYWLSGNCLNPTCAFRH 60
Query: 61 PPLDAHVTEAPSESVSLPCQSSIP--VNKTSIPCYFYFNGFCSRGDRCSFLHGPD 113
PP+D H T PSE P QSS+P NKT + CYF+FNGFC++G +CSFLHGPD
Sbjct: 61 PPVDGH-TGVPSE----PTQSSLPATANKTMVTCYFFFNGFCNKGSKCSFLHGPD 110
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 205/404 (50%), Gaps = 37/404 (9%)
Query: 135 ENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPERRASPQISLS 194
EN T++G+ T + R + L +++ QPK L P+ + ++ +IS
Sbjct: 212 ENGTASGNKTSVASSTPRDTITRKALS---NIKPQPKEDLQLPLPENVKQQGDCFKISSL 268
Query: 195 EGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESSPGFDVLVDNEN 254
+ + V +SDS + +GF S T+ SS+E + VEPEER SSPGFDVLV +E+
Sbjct: 269 DYKEAVVTRSDSPLPEDGFAHNMSPSCTEQSSEEQENSQVEPEER--SSPGFDVLVHDES 326
Query: 255 RAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPESEP-HEGETYNVHYY 313
NLG+E SEYL + + ELN +LGY+F+ +YD M ++ +E +TY+ +
Sbjct: 327 -GNNLGYEGGSEYLPVLDMDDHELNEQYLGYEFKNTNDYDTMCSGADILYERKTYDDYRC 385
Query: 314 LDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDDCNADLRDYLRKRRVVDGHS 373
D + R+ G RE +LD++ SRKR +++S + A L R +
Sbjct: 386 FDRDFTSPSERKVCGYPREMVLDTIFSRKR----IRMSTSEMAACDYSDLDLRHHLRRRR 441
Query: 374 IVHS------TRRHESSRLMGRIQGRHR------GLLLHGRLASEFGKNYIESHGHKGTL 421
V+S RRHESS LM +Q R R G + RL S+ G + I
Sbjct: 442 EVNSPPDTGLLRRHESSSLM--VQNRERRHSQDIGQQQNRRLTSQVGFSSIREVEDLSI- 498
Query: 422 PNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKS 481
AN+ R + + R+H++ K KR S SRKP ++RS Q AF+GPK+
Sbjct: 499 ---ANKQRLFRPYQQSRPRKHYREKPA-KRPFPSSKESRKPIVKQQRSIQKSNAFSGPKT 554
Query: 482 LAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEK 525
LAEI+EEKKK+ ES H + FQ PKPL EILK++
Sbjct: 555 LAEIKEEKKKSGES-------SHCESSSAGFQDPKPLHEILKDR 591
>gi|115462379|ref|NP_001054789.1| Os05g0176400 [Oryza sativa Japonica Group]
gi|75254482|sp|Q6AT25.1|C3H34_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 34;
Short=OsC3H34
gi|50511420|gb|AAT77343.1| unknown protein [Oryza sativa Japonica Group]
gi|113578340|dbj|BAF16703.1| Os05g0176400 [Oryza sativa Japonica Group]
gi|215734945|dbj|BAG95667.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630382|gb|EEE62514.1| hypothetical protein OsJ_17312 [Oryza sativa Japonica Group]
Length = 493
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 245/546 (44%), Gaps = 101/546 (18%)
Query: 9 NTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPL-DAHV 67
NTDCVYFLASP TC KG CEYRH + AR N R+CWYW GNC+NP C FRHPPL + +
Sbjct: 17 NTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLENLNK 76
Query: 68 TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGP----DGIAPNGKSSK 123
T++ ++ +SL C +S+ K + PCYFY+N CS+GD C +LH P D + + K++
Sbjct: 77 TKSLADPLSL-CSTSV---KAANPCYFYYNSHCSKGDNCPYLHEPLTSNDAVGTSCKATT 132
Query: 124 SASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIP 183
S AV+ S + + T + P Q ++ P I
Sbjct: 133 SNPAVSKSYVGDEMVEESKDTITNP-------------------CQDTSCHIKEVPVSI- 172
Query: 184 ERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESS 243
+P+ +E + A+ S + + +MK + +D +S + DH E +ER +SS
Sbjct: 173 ----NPEFGEAEAVSGALETSTDI---DEYMKCSA--VSDLNSGDSTMDHTEQDER-DSS 222
Query: 244 PGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPESEPH 303
PGFDVLVD + L + D E+ L T +++ L+ Y P+ YD Y H
Sbjct: 223 PGFDVLVD-----DCLSNKSDLEHQLTTESDNKVLHAE---YGIRDPVLYDMYY-----H 269
Query: 304 EGETYNVHYYLDNEHILDKVREY-----PGRARERILDSMLSRKRKLFPMKVSVDDCNAD 358
+ E YN Y LD + Y P A E + L L P V D
Sbjct: 270 DPEYYN---YEPEFCGLDDRQGYLYLCQPNGAHEHESEITLGH---LLPQNTEVTSDEYD 323
Query: 359 LRDYLRKRRVVDGHSIVHSTRRHESSRLMGR--------IQGRHRGLLLHGRLASEFGKN 410
R + R + + +H R + + +G+ + L +
Sbjct: 324 RR-FFNPRNFTSSVADTNFVHQHTQIRHISKRRPENRKGAKGKKDCIKRSRCLEPKNSTQ 382
Query: 411 YIESHGHK-------GTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPF 463
IES + G P AN + K N +Q H LSA
Sbjct: 383 QIESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQQHV----------LSA------ 426
Query: 464 SSERRSSQTETA-FTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLT-DFQGPKPLSEI 521
+SS+ TA FTGPK+LA+I+EEK K+ S H R+ + DF+GPK L+E+
Sbjct: 427 ----KSSEHPTADFTGPKTLAQIKEEKCKSNSSFSHSTACTPNVRSFSDDFEGPKSLTEL 482
Query: 522 LKEKRR 527
L K R
Sbjct: 483 LMTKSR 488
>gi|125551025|gb|EAY96734.1| hypothetical protein OsI_18652 [Oryza sativa Indica Group]
Length = 493
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 249/550 (45%), Gaps = 101/550 (18%)
Query: 9 NTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPL-DAHV 67
NTDCVYFLASP TC KG CEYRH + AR N R+CWYW GNC+NP C FRHPPL + +
Sbjct: 17 NTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLENLNK 76
Query: 68 TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGP----DGIAPNGKSSK 123
T++ ++ +SL C +S+ K + PCYFY+N CS+GD C +LH P D + + K++
Sbjct: 77 TKSLADPLSL-CSTSV---KAANPCYFYYNSHCSKGDNCPYLHEPLTSNDAVGTSCKATT 132
Query: 124 SASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIP 183
S A++ S + + T + P Q ++ P I
Sbjct: 133 SNPAISKSYVGDEMVEESKDTITNP-------------------CQDTSCHIKEVPVSI- 172
Query: 184 ERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESS 243
+P+ +E + A+ S + + +MK + +D +S + DH E +E +SS
Sbjct: 173 ----NPEFGEAEAVSGALETSTDI---DEYMKCSA--VSDLNSGDSTMDHTEQDE-CDSS 222
Query: 244 PGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPESEPH 303
PGFDVLVD + L + D E+ L T +++ L+ Y P+ YD Y H
Sbjct: 223 PGFDVLVD-----DCLSNKSDLEHQLTTESDNKVLHAE---YGIRDPVLYDMYY-----H 269
Query: 304 EGETYNVHYYLDNEHILDKVREY-----PGRARERILDSMLSRKRKLFPMKVSVDDCNAD 358
+ E YN Y LD + Y P A E + L L P V D
Sbjct: 270 DPEYYN---YEPEFCGLDDRQGYLYLCQPNGAHEHESEITLGH---LLPQNTEVTSDEYD 323
Query: 359 LRDYLRKRR----VVDGHSIVHSTR-RHESSRLMGRIQGR--HRGLLLHGR-LASEFGKN 410
R + R V D + + T+ RH S R +G + + R L +
Sbjct: 324 RR-FFNPRNFTSSVADTNFVHQQTQIRHISKRRPENRKGAKGKKDCIKRSRCLEPKNSTQ 382
Query: 411 YIESHGHK-------GTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPF 463
IES + G P AN + K N +Q H LSA
Sbjct: 383 QIESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQQHV----------LSA------ 426
Query: 464 SSERRSSQTETA-FTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLT-DFQGPKPLSEI 521
+SS+ TA FTGPK+LA+I+EEK K+ S H R+ + DF+GPK L+E+
Sbjct: 427 ----KSSEHPTADFTGPKTLAQIKEEKCKSNSSFSHSTACTPNVRSFSDDFEGPKSLTEL 482
Query: 522 LKEKRRPGTV 531
L K R V
Sbjct: 483 LMTKSRSSVV 492
>gi|356528170|ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
[Glycine max]
Length = 710
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 266/629 (42%), Gaps = 166/629 (26%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
++E KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC YWL+GNC+NP+C FRHP
Sbjct: 21 QDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLNPKCPFRHP 80
Query: 62 PLDA----HVTEAPSESV---SLPCQSSI--PVN--KTSIPCYFYFNGFCSRGDRCSFLH 110
PLD T A SV +P S+ P N K ++PCYF+ G C +GDRC+FLH
Sbjct: 81 PLDGLLGTQATAAGGPSVPPSQIPTASAAHAPYNSSKQAVPCYFFQKGLCLKGDRCAFLH 140
Query: 111 GPDGIAPNGKSSKSASAV------------------TDSLLSENKTSAGD--GTGSPPTE 150
GP P+ +K A+ V + E KTS G+ +G P E
Sbjct: 141 GPPAPTPS-TGNKVAAQVPVTIQGAENPSFKKPFVSNEKYTQERKTSQGNFAKSGGAP-E 198
Query: 151 IRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAA 210
+P+P + P+ ++ + K++P A S +T++ ++ + A
Sbjct: 199 AKPSPK---------IETAPQRNMFE-LEKKVPPPSAEFNNEASRFKTISPPVTNGPIVA 248
Query: 211 EGFMKTKSHLYTD--WSSDEHADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYL 268
++ + D + S + +D+ + ESSPGFDVLV +E R + + + E+
Sbjct: 249 RSNRLHQARVPDDHNFQSGKDSDEFLR-----ESSPGFDVLVADELRNSDY-YHGEDEFG 302
Query: 269 LATNREHRELN-------GHFLGYDFEGPIEYD----PMYPESEPHEGETYNVHYYLDNE 317
A ++ R L+ GH Y I+ + P ES H E Y +
Sbjct: 303 KARGQDERNLDSLNEYDLGHSGDYSLAADIDRERFRGPQGYESYDHMQEPYAWEQHR--- 359
Query: 318 HILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDDCNADLRDYLRKRRVVDG------ 371
K + GR +R+R P V +DLR +L KRR +G
Sbjct: 360 ----KPSSHLGRR---------TRRRSDSPENAEV----SDLRHHLSKRRKGNGLKSVIS 402
Query: 372 HSIVHSTRRHESSR---------------------LMGRIQ---------------GRHR 395
H H E SR GRI+ GR R
Sbjct: 403 HDHAHGGHGEEQSRRSFSRKDSLELPLNESSLGNRFRGRIKLPENGDGDHPEREDGGRFR 462
Query: 396 GLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHL 455
L GRL + + E H G Q R+SK ++ + G R
Sbjct: 463 NRLPSGRLPATHHLSPREGRVHDRI--RGRLQDDERRNSKDRLMGRELPGDR-------- 512
Query: 456 SAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTD---- 511
+ F PKSL+E++ + G+ R+L D
Sbjct: 513 ------------------SDFAAPKSLSELKNGRNTENREQQSLGR----RRSLRDDHPQ 550
Query: 512 ------FQGPKPLSEILKEKRRPGTVSDA 534
F+GPKPLSEILKEKR G SD+
Sbjct: 551 SDDDFLFEGPKPLSEILKEKRGAGADSDS 579
>gi|326522018|dbj|BAK04137.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 247/531 (46%), Gaps = 67/531 (12%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDA 65
++ NTDCV+FL S ++C KG CEYRH E AR NPR+CWYW G+C+NP C FRHPP++
Sbjct: 15 RRSNTDCVFFLVSRVSCTKGSKCEYRHCEGARFNPRNCWYWFHGSCVNPSCTFRHPPMEN 74
Query: 66 HVTEAPSESVSLPCQSSIPVN-KTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
++S+++P S V+ KT+ PCYFY++ C +GD C FLH P PN +S+ S
Sbjct: 75 FNR---TKSLTVPPSSDGSVSVKTANPCYFYYSSGCKKGDNCPFLHEP---IPNTESAIS 128
Query: 125 ASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPE 184
+ A T + + N+ +GD E +P + L H+ + PK +PE
Sbjct: 129 SEATTFN-PAVNENFSGDEMVEASEEAHVSPCQDTLY-----------HIKKCHPKEVPE 176
Query: 185 RRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESSP 244
I L ++V S+ E ++K +H +D SS+ + E + +SSP
Sbjct: 177 -----SIYLEFDGPISVTPETSIDMGE-YIKCFTH--SDQSSEYSTMEDAEQDGSRDSSP 228
Query: 245 GFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPESEPHE 304
GFDVLVD + L ++D E LA R+ + L+ YD P YD Y +S +
Sbjct: 229 GFDVLVD-----DGLSNKNDLEKQLAQKRDAQVLHAK---YDIGDPACYDRDYYDSW-YY 279
Query: 305 GETY----NVHYYLDN-EHILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDDCNADL 359
G+ + + H YL + E + D E L +L R L + S D+ +
Sbjct: 280 GQAFCSFDDQHAYLSHPEGVQDP-------DVETTLGHILHNTRDL--ARPSFDEFD--- 327
Query: 360 RDYLRKRRVVDGHSIV----HSTRRHESSRLMGRIQGRHRGLLLHGRLASEFGKNYIESH 415
R + + V H+ RH S R R + R GR G +
Sbjct: 328 RMFFNSSFISSAADDVFPHQHNETRHTSKR---RPEKRKGAKSRKGRTKKRRGLEPVCGF 384
Query: 416 GHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETA 475
+ Q +++R +G++ +R + I S R S T
Sbjct: 385 QGIESRSTHYRQESLMEECPESVVRATFRGQKKKRRGKQHNVI------SARFSEHPTTD 438
Query: 476 FTGPKSLAEIREEKKKAEESGGH-FGKVGHLSRTLTDFQGPKPLSEILKEK 525
FTGPK+LA+I+E+ ++ H ++ H DF+GPK L+E++K K
Sbjct: 439 FTGPKTLAQIKEDNCISKSRLSHSAARMPHGGTFSNDFEGPKSLTELMKAK 489
>gi|357166680|ref|XP_003580797.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Brachypodium distachyon]
Length = 703
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 187/600 (31%), Positives = 265/600 (44%), Gaps = 133/600 (22%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE +RNTDCVYFLASPLTCKKG +C++RH+EIAR+NPRDCWYWL GNC+NP+C FRHP
Sbjct: 23 EEEALRRNTDCVYFLASPLTCKKGNECDFRHSEIARMNPRDCWYWLNGNCLNPKCSFRHP 82
Query: 62 PLDAHVTEAPSESVSLPCQSS----IPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAP 117
P+D + APS + P SS + K +PCY++ G C +GD+C F HGP
Sbjct: 83 PIDG-MFGAPSPGI--PAVSSHYAAYNLGKQMVPCYYFQKGNCVKGDKCPFYHGPQSTGN 139
Query: 118 NGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSE--APL-----KLAVDVRVQP 170
N + + V+ L + +T D G + N + P+ K+AVD +P
Sbjct: 140 N--PPEQVAKVSSFPLEQPQTQKNDLLGIKESARTNNLIQRGGPIIDDRSKMAVD---RP 194
Query: 171 KGHLLQSAPKRIPERRASPQI-SLSEGETVAVVKSDSMVAAEGFMKT------------- 216
+ ++ IP + AS + SL + E + SM AA+ +T
Sbjct: 195 TANSAKTPADAIPAKLASSALKSLPKSEKL----QSSMPAAKRSFRTSSGEDHPECYHNN 250
Query: 217 --KSHLYTDWSSDEH--ADDHVEPEERL------ESSPGFDVLVDNENRAENLGFEDDSE 266
+S DW+ D ADD + R ESSPGFDVLVDN+ D +
Sbjct: 251 LIESDPVQDWNEDYRPPADDDLPQNSREADELPGESSPGFDVLVDNDG--------DAAA 302
Query: 267 YLLATNREHRELNGHFLGYDFEGPIEYDPMYPESEP-HEGETYNVHYYLDNEHILDKVRE 325
YL R++ Y E EY P E P HE E +N + + + ++ +
Sbjct: 303 YLHDEEDFGRDM------YPVED-YEYAPADFEIPPHHERELFN---RMGEQGPVGQIYD 352
Query: 326 YPGRAR-----ERILDSMLSRKRKLFPMKVS-VDDCNADLRDYLRKRRV----------- 368
R R ER +D +R+ + V+ +DLR LR+R++
Sbjct: 353 GYERKRRRTSSERNMDRPSHSERRSRHRDIGHVEIDGSDLRHRLRRRKINGSSGTSPERS 412
Query: 369 --------------VDGHSIVHSTR-RHESSR---LMGRIQGRHRGLLLHGRLASEFGKN 410
DGH H+ R RH S R L R+QGR + L GR
Sbjct: 413 GEHRRRDERYRERAYDGH---HTHRDRHRSPRGSTLSSRLQGR---IKLPGRSPDRV--- 463
Query: 411 YIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGK---RLLKRKSHLSAISRKPFSSER 467
S + P + +H +R G+ R L+R S L + +R
Sbjct: 464 VTSSEKEQDRRPL-RERLSPVKHMDVQGVRHREAGQHQERTLRRSSELPSSARNADGQHL 522
Query: 468 RSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKRR 527
R + TE+ G K+ + E DF+GPKPLS IL++KR+
Sbjct: 523 RRNVTESLNFGRKANGRVESEAS-------------------LDFEGPKPLSIILQKKRQ 563
>gi|297817836|ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arabidopsis lyrata subsp.
lyrata]
gi|297322639|gb|EFH53060.1| hypothetical protein ARALYDRAFT_484140 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 252/562 (44%), Gaps = 79/562 (14%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE+ K NTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL GNC+NP+CGFRHP
Sbjct: 25 EEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCMNPKCGFRHP 84
Query: 62 PLDAHVTE---APSESVSLPCQSSIP---VNKTSIPCYFYFNGFCSRGDRCSFLHGPDGI 115
PL+ + AP+ SV P +++ V K +PC F+ G C +GD CSFLH P+
Sbjct: 85 PLEGLLGNQGGAPAGSVQ-PTHATVQHSGVAKQPVPCVFFQKGMCMKGDMCSFLHTPNPA 143
Query: 116 APNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLL 175
A A D S K + TG N S+A +K VD+ P+ +
Sbjct: 144 AYKKLLPVEAKPAADPQFS--KKPIENNTGEKKF-ADANLSKA-VKAHVDISAAPR---V 196
Query: 176 QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDH-- 233
SA R RR + G V K + V + + L + SD++ H
Sbjct: 197 TSAGLR-DSRRVEGYVPEHMGYDPVVQKKGTGVPSFTEGGHSTQLLHKYGSDDNNSFHNG 255
Query: 234 VEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHR--ELNGHFLGYDFEGP 290
+ ++ L ESSPGFDVLVDNE R DSEY +R R + G+ +
Sbjct: 256 KDADDVLRESSPGFDVLVDNEAR--------DSEYYRVEDRYGRRSQEGGNSVN------ 301
Query: 291 IEYDPMYPESEPHEGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMKV 350
EYDP + E ++ + + + + R G R S +R +
Sbjct: 302 -EYDPDFSAIADDEKAFHDQRF---DPYDQREDRYAWGNRRVSSERGDHSERRVYAEDER 357
Query: 351 SVDDCNADLRDYLRKRRVVDGHSIVHS----------------TRRH-------ESSRLM 387
S + +DLR L K+R V+G V S +RR SSRL
Sbjct: 358 SENILASDLRYRLAKQRKVNGVRSVGSHDYGAPDSSVERGYRDSRRDTLRENSISSSRLQ 417
Query: 388 GRIQGRHRGLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKR 447
GRI+ R R G ++ + +G + + G R L ++H G +
Sbjct: 418 GRIKLRERSNGDEG--------HHFDRRNERGRDRSELSSQGRLRDRIKGRLEENHSGNQ 469
Query: 448 LLKRKSHLSAISRKPFSSERR---SSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGH 504
+R R+ ER+ S ET T +S E+ K+K+ E H K
Sbjct: 470 --ERGFRAPWARRREMEDERKPAPKSIAETKSTREESKPELSLGKRKSFEEDHHSHK--- 524
Query: 505 LSRTLTDFQGPKPLSEILKEKR 526
R+ F P P SEILK KR
Sbjct: 525 --RSGDSFAAPLPFSEILKRKR 544
>gi|224108151|ref|XP_002314739.1| predicted protein [Populus trichocarpa]
gi|222863779|gb|EEF00910.1| predicted protein [Populus trichocarpa]
Length = 735
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 178/590 (30%), Positives = 266/590 (45%), Gaps = 88/590 (14%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC++WL GNC+NP+CGFRHP
Sbjct: 21 EEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCYFWLNGNCMNPKCGFRHP 80
Query: 62 PLDA----HVTEAPSESVSLPCQSSIPV-------NKTSIPCYFYFNGFCSRGDRCSFLH 110
PLD T + S+ ++ K + C F+ G C +GDRC+F H
Sbjct: 81 PLDGLFGNQTTASAGSSLPPSHAAAAAATHAPHNSGKQGVLCIFFQQGICLKGDRCAFSH 140
Query: 111 GPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTE----IRPNPSEAPL-KLAVD 165
GP+ +++ V+ ++ T A PP + ++ E L ++ +
Sbjct: 141 GPN---------HASNRVSQTMAFTPGTEA-----HPPEKAFGGLQKCTQEQKLPQVNLS 186
Query: 166 VRVQPKGHLLQSAPKRIPERRASPQISL------SEGETVAVVKSDSM-VAAEGFMKTKS 218
V+P + I R S ++ S + V KS ++ G +
Sbjct: 187 KAVEPPTVAKPVSKAEIASARNSAGVARNVVPPKSTDDEVPRYKSSNLPPEVNGNSSRSN 246
Query: 219 HLYTDWSSDEHAD-DHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHR 276
L+ +D+H + + + +E L ESSPGFDVLVD+E R + + + ++ E R
Sbjct: 247 QLHLSRVADDHVNHNGKDADEYLRESSPGFDVLVDDELRDSDY-YHGEDQFGRTIGHEGR 305
Query: 277 ELNGHFLGYDFEGPIEYDPMYPESEPHEGE--TYNVHYYLDNEHILDKVREYPGRARERI 334
LN Y P +Y + P+ + G+ Y+ + ++ +H ++ R + ER+
Sbjct: 306 NLNS-VDEYGRGHPADYGSL-PDDQERYGDPRGYDPYEHMQGQHAWEQHRA----SSERM 359
Query: 335 LDSMLSRKRKLFPMKVSVDDC-NADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGR-IQG 392
L + +R+ + S + +DLR L K+R V+G V S + + R QG
Sbjct: 360 LVAPAHLERRGYSKADSPEHIEGSDLRYLLSKQRRVNGLRSVVSNDFVPGNHVEERGYQG 419
Query: 393 RHR----GLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRL 448
R LL H S + I+ LP G+ G H++ I R ++G RL
Sbjct: 420 SSRRDSHHLLSHESPISSRLRGRIK-------LPGGSPNEGGDLHAEREIDRGRNRG-RL 471
Query: 449 LKRKSHLSAIS---------------------RKPFSSERRSSQTETAFTGPKSLAEIRE 487
+S +S+ R P T F PK LAE+R
Sbjct: 472 SPVRSLISSQQGRFRDRMKARVEEDYNEGRNFRGPHVRRELVDDKITNFAAPKRLAELRG 531
Query: 488 EKKKAEESGGHFGKVGHL-----SRTLTDFQGPKPLSEILKEKRRPGTVS 532
K +S GK +L S F+GP PLSEILK KR G +
Sbjct: 532 GKNAEGKSQQSLGKRKYLEDHPPSDADLSFEGPMPLSEILKRKRGGGAAA 581
>gi|255578747|ref|XP_002530231.1| conserved hypothetical protein [Ricinus communis]
gi|223530235|gb|EEF32137.1| conserved hypothetical protein [Ricinus communis]
Length = 591
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 159/310 (51%), Gaps = 54/310 (17%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL G+C+NP+CGFRHP
Sbjct: 21 EEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCYYWLNGSCLNPKCGFRHP 80
Query: 62 PLDA--HVTEAPSESVSLPCQSSI-------PVN--KTSIPCYFYFNGFCSRGDRCSFLH 110
PLD + A S SLP + P N K ++PC F+ GFC +GDRC+F+H
Sbjct: 81 PLDGLFGIQAATSAGPSLPQSQKVAAPAVHAPQNPGKQAVPCIFFQKGFCLKGDRCAFVH 140
Query: 111 GPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSE--APLKLAVDVRV 168
GP S ++ + SAG TE+ P P KL D R
Sbjct: 141 GP-------------SPTSNKISQPVGPSAG-------TELPPQTKAYGGPQKLTQDQRT 180
Query: 169 QPKGHLLQSAPKRIPERRASPQISLSEGETVAVVK----SDSM-VAAEGFMKTKSHLYTD 223
P+ + ++ + AS S + V V + S SM V + T H +
Sbjct: 181 -PQANFSRAVEASTEAKLASKSEIGSRRDVVGVERNLPPSKSMDVEVAKYKVTDLHPVVN 239
Query: 224 WSS-------------DEHADDHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLL 269
+S D++ + + +E L ESSPGFDVLVD+E R + + + +Y
Sbjct: 240 GNSSRFNRLHQSQVPDDQNFQNGKDVDELLRESSPGFDVLVDDELRNSDF-YHGEDQYGR 298
Query: 270 ATNREHRELN 279
T E R LN
Sbjct: 299 TTGPEGRNLN 308
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 474 TAFTGPKSLAEIREEKK----------KAEESGGHFGKVGHLSRTLTDFQGPKPLSEILK 523
T F PKSLAE++ K K ++ G H G LS F+GP PLSEILK
Sbjct: 382 TDFAAPKSLAELKGTKSIEGVMQQSLGKRKQLGDHQPSEGDLS-----FEGPMPLSEILK 436
Query: 524 EKRRPGTVSDADTWS 538
KR+ G + S
Sbjct: 437 RKRQAGVAASGSASS 451
>gi|205688361|sp|Q6K977.2|C3H19_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 19;
Short=OsC3H19
gi|125584263|gb|EAZ25194.1| hypothetical protein OsJ_08993 [Oryza sativa Japonica Group]
Length = 647
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 246/583 (42%), Gaps = 136/583 (23%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE ++R+TDC+YFLASPLTCKKG +CEYRH++ AR+NPRDCWYW GNC NP+C FRHP
Sbjct: 12 EEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHP 71
Query: 62 PLDAHV--------TEAPSESVSLPCQSSIP-----VNKTSIPCYFYFNGFCSRGDRCSF 108
PLD V ++ + VS+P Q+ +P K +PCY++ G C +GDRC+F
Sbjct: 72 PLDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAF 131
Query: 109 LHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPN---PSEAPLKLAVD 165
LH P TGSP + P+ P +
Sbjct: 132 LHLPQA-----------------------------TGSPAPQHTTKVFAPASVPHPQLKN 162
Query: 166 VRVQPKGHLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVA-AEGFMKTKSHLYTDW 224
+P Q+AP I ++ P+ S G+T + + G + K Y
Sbjct: 163 SWTKPNSSAQQNAPPAIFDK---PKDSAHNGKTAQKQNLTNRAGHSSGIIHDKKGSYMPS 219
Query: 225 -----------SSDEHADDHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATN 272
+ D+ A++ VE E + E SPG DVL G +D++E L +
Sbjct: 220 GVTKNYRPPPSTGDDLAENGVEMGEFVREPSPGSDVLTG--------GADDNTEQSLRED 271
Query: 273 R-EHRELNGHFLGYDFEGPIEYDPMYPESEPHEGETYNVHYYLDNEHILDKVREYPGRAR 331
R +R NG E H G H E R + G A
Sbjct: 272 RGAYRRTNG--------------------EQHIGMLRQTHDSYGFE------RSHRGSAE 305
Query: 332 ERILDSMLSRKRKLFPMKVSVDDCNADLRDYLRKRR---------VVDGHSIVHSTRRHE 382
+ + +S S++ PM ++ D ++DLR L K+R V D H++ RH+
Sbjct: 306 KLLSESRFSQRE---PMPLTAD--SSDLRQRLLKQRRLNNPRSGQVSDRHNVYPEDERHD 360
Query: 383 SSRLMGRIQGRHRGL---LLHGRL----ASEFGKNYIESHGHKGTLPNGANQHGWARHSK 435
R G Q + G+ L GR+ + F + ++ + P AR S
Sbjct: 361 RHRQRGEEQASNDGVSSSRLRGRIRLPAETTFDRLGLQPEKERDRGPR-------ARLSP 413
Query: 436 SNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETA-FTGPKSLAEIREEKKKA-- 492
+ K LK K + S + + E+ F GPKSLAE++ +K
Sbjct: 414 PSQTDLRGKLHDRLKAKPNEDVSGNVQSSLSKANEDAESLNFAGPKSLAELKAKKVAGSL 473
Query: 493 -EESGGHFGKVGHLSRTLTD--------FQGPKPLSEILKEKR 526
+ S G V S +T F GPKPL+ ILK KR
Sbjct: 474 MKSSRSLTGPVRMTSEIVTIKDSSDPVLFDGPKPLNAILKRKR 516
>gi|302774735|ref|XP_002970784.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
gi|300161495|gb|EFJ28110.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
Length = 715
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 261/642 (40%), Gaps = 151/642 (23%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
K+NTDCVYFLASPLTCKKG +CE+RH+E AR+NPRDCWYW++G+C+N C FRHPPL+A
Sbjct: 33 KKNTDCVYFLASPLTCKKGEECEFRHSEAARINPRDCWYWVSGSCLNRDCPFRHPPLEA- 91
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG---PDGIAP------ 117
P Q NK PCYF+ G+C++GDRC FLHG P AP
Sbjct: 92 -------GNPTPGQQQPASNKGRTPCYFFIQGYCAKGDRCPFLHGVPKPTTTAPPELEVP 144
Query: 118 -------NGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPS-----EAPLKLAVD 165
K S +A + + + + + +PP+++ P+ P A
Sbjct: 145 PRSEAAIPSKPSLTAQKPSVDIQLQAIAAVPEARPAPPSQVA-KPAGVFQVAKPAAAATQ 203
Query: 166 VRVQPKGHLLQSAPKRIPERRASPQISLSEGETVA------VVKSDSMVAAEGFMK--TK 217
V + + AP P + A P + S VA V +S AE + +
Sbjct: 204 VAKPAASQVAKPAP---PTQIAKPVVKPSPPAQVAKPAPSHVDRSTGYTPAENVDRYTRE 260
Query: 218 SHLYT-----------------------DWSSDEHADDHV------------EPEERL-E 241
S YT + S H DD + +PEER E
Sbjct: 261 STGYTPAENGNGVAGRSRSVAAEPEESAEPVSSTHEDDDLLMTTSRAENGTRDPEERWEE 320
Query: 242 SSPGFDVLVDN----------ENRAENLGFEDDSEYLLATNREHRELNGHFLGYDFEGPI 291
SSPGFDVLVD+ N F+DD E+ ++ E+ G++ GP
Sbjct: 321 SSPGFDVLVDDGPEESEFLHGNNDEAGDRFDDDYEF------QYSEMYNQTGGFE-SGPP 373
Query: 292 EYDPMYPESEPHEGETYNVHYYLDNEHILDKV------------REYPGRARERILDSML 339
Y+ + HE + Y D + D++ R+Y + R+ S+
Sbjct: 374 LYERESYDRIRHENGRFEQGEYTDYDAPYDRMDFDRPPLLDNPERDYFRQTRQVRTQSIK 433
Query: 340 SRKRKLFPMKVSVDDCNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHRGLLL 399
R R D N DLR+ L +RR +D + R + RHR
Sbjct: 434 ERLRFNHQDPRPFLD-NGDLRNVLERRRRLDVYPGREGDDRFPREFT---DRERHRDDFS 489
Query: 400 HGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAIS 459
GR + +NY H+ L + + + S +H + R I
Sbjct: 490 RGR-ERDRAQNYF----HQARLNSSSGRRSSRERSNERFHHRHPPPDAFMYRGG--GQID 542
Query: 460 RKPFS----------------SERRSSQTETAFTGPKSLAEIREEKKK------------ 491
R+P S R + + F PKSLA+IR EK+K
Sbjct: 543 RRPVKDASPPGYEARNFGQGFSRRTGGEEPSDFAAPKSLAQIRAEKRKLDGEEVAMVSSS 602
Query: 492 -----AEESGGHFGKV-GHLSRTLTDFQGPKPLSEILKEKRR 527
+ ES H G++ G F+GPKPL EILK+KRR
Sbjct: 603 KRSYISRESRFHGGELNGGGDDGDQHFEGPKPLHEILKDKRR 644
>gi|16604651|gb|AAL24118.1| unknown protein [Arabidopsis thaliana]
Length = 669
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 249/574 (43%), Gaps = 110/574 (19%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE+ K NTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL GNC+NP+CGFRHP
Sbjct: 25 EEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHP 84
Query: 62 PLDAHVTE---APSESVSLPCQSSI---PVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGI 115
PL+ + AP+ SV P ++ V K +PC F+ G C +GD CSFLH P+
Sbjct: 85 PLEGLLGNQGGAPAVSVQ-PIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPA 143
Query: 116 APNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLL 175
A + A TD S+ P E N +E V++ KGH
Sbjct: 144 AYKKQHPVEAKPATDPQCSKK-----------PIE---NNTEEKKLPDVNLSKVVKGHTD 189
Query: 176 QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEG-----FMKT--KSHLYTDWSSDE 228
SA R+ S+ EG V + +V +G F + + L + SD+
Sbjct: 190 ISAAPRVASTGLRDSRSV-EGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDD 248
Query: 229 H--------ADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNG 280
+ ADD + ESSPGFDVLVDNE DSEY +R R
Sbjct: 249 NNSFHNGKDADDVLR-----ESSPGFDVLVDNE--------AGDSEYYHVEDRYGRRSQE 295
Query: 281 HFLGYDFEGPIEYDPMYPESEPHEGETYNVHYY-----------------LDNEHILDKV 323
G EYDP + + E + + E LD+
Sbjct: 296 R-------GNSEYDPDFSAIADGDKEALREQRFDSYDRREDRGWGHRRVSSEREDRLDRR 348
Query: 324 REYPGRARERILDS----MLSRKRKLFPMKVSVD-------DCNADLRDYLRKRRVVDGH 372
E IL+S L+++RK M++SV D + D R Y RR
Sbjct: 349 VYAEDERSENILESDLRYRLAKQRKGNGMRLSVGGHDYAAPDSSMD-RGYRESRRDTPRE 407
Query: 373 SIVHSTRRHESSRLMGRIQGRHRGLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWAR 432
+ + SSRL GRI+ R R +G F + E + LP+ G R
Sbjct: 408 NSI------SSSRLQGRIKLRERS---NGEEGHHFDRR-SERGRDRSELPS----QGRLR 453
Query: 433 HSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKA 492
+ L ++H G + +R R+ ER+S+ + +S E K+K+
Sbjct: 454 DRIKSRLEENHSGNQ--ERGFGAPWARRREMEDERKSAPKSSR---EESKPEPSLGKRKS 508
Query: 493 EESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKR 526
E H K R+ F P P SEILK K+
Sbjct: 509 FEEDHHSHK-----RSRDSFAAPLPFSEILKRKK 537
>gi|18395319|ref|NP_027420.1| zinc finger CCCH domain-containing protein 17 [Arabidopsis
thaliana]
gi|75268039|sp|Q9ZUM0.1|C3H17_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 17;
Short=AtC3H17
gi|4038036|gb|AAC97218.1| expressed protein [Arabidopsis thaliana]
gi|24030234|gb|AAN41294.1| unknown protein [Arabidopsis thaliana]
gi|330250460|gb|AEC05554.1| zinc finger CCCH domain-containing protein 17 [Arabidopsis
thaliana]
Length = 669
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 248/574 (43%), Gaps = 110/574 (19%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE+ K NTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL GNC+NP+CGFRHP
Sbjct: 25 EEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHP 84
Query: 62 PLDAHVTE---APSESVSLPCQSSI---PVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGI 115
PL+ + AP+ SV P ++ V K +PC F+ G C +GD CSFLH P+
Sbjct: 85 PLEGLLGNQGGAPAVSVQ-PIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPA 143
Query: 116 APNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLL 175
A + A TD S+ P E N +E V++ KGH
Sbjct: 144 AYKKQHPVEAKPATDPQCSKK-----------PIE---NNTEEKKLPDVNLSKVVKGHTD 189
Query: 176 QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEG-----FMKT--KSHLYTDWSSDE 228
SA R+ S+ EG V + +V +G F + + L + SD+
Sbjct: 190 ISAAPRVASTGLRDSRSV-EGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDD 248
Query: 229 H--------ADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNG 280
+ ADD + ESSPGFDVLVDNE DSEY +R R
Sbjct: 249 NNSFHNGKDADDVLR-----ESSPGFDVLVDNE--------AGDSEYYHVEDRYGRRSQE 295
Query: 281 HFLGYDFEGPIEYDPMYPESEPHEGETYNVHYY-----------------LDNEHILDKV 323
G EYDP + + E + + E LD+
Sbjct: 296 R-------GNSEYDPDFSAIADGDKEALREQRFDSYDRREDRGWGHRRVSSEREDRLDRR 348
Query: 324 REYPGRARERILDS----MLSRKRKLFPMKVSVD-------DCNADLRDYLRKRRVVDGH 372
E IL+S L+++RK M++SV D + D R Y RR
Sbjct: 349 VYAEDERSENILESDLRYRLAKQRKGNGMRLSVGGHDYAAPDSSMD-RGYRESRRDTPRE 407
Query: 373 SIVHSTRRHESSRLMGRIQGRHRGLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWAR 432
+ + SSRL GRI+ R R +G F + E + LP+ G R
Sbjct: 408 NSI------SSSRLQGRIKLRERS---NGEEGHHFDRR-SERGRDRSELPS----QGRLR 453
Query: 433 HSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKA 492
L ++H G + +R R+ ER+S+ + +S E K+K+
Sbjct: 454 DRIKGRLEENHSGNQ--ERGFGAPWARRREMEDERKSAPKSSR---EESKPEPSLGKRKS 508
Query: 493 EESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKR 526
E H K R+ F P P SEILK K+
Sbjct: 509 FEEDHHSHK-----RSRDSFAAPLPFSEILKRKK 537
>gi|20466824|gb|AAM20729.1| unknown protein [Arabidopsis thaliana]
Length = 618
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 249/577 (43%), Gaps = 116/577 (20%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE+ + NTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDC+YWL GNC+NP+CGFRHP
Sbjct: 25 EEDALEWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHP 84
Query: 62 PLDAHVTE---APSESVSLPCQSSI---PVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGI 115
PL+ + AP+ SV P ++ V K +PC F+ G C +GD CSFLH P+
Sbjct: 85 PLEGLLGNQGGAPAVSVQ-PIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPA 143
Query: 116 APNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLL 175
A + A TD S+ P E N +E V++ KGH
Sbjct: 144 AYKKQHPVEAKPATDPQCSKK-----------PIE---NNTEEKKLPDVNLSKVVKGHTD 189
Query: 176 QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEG-----FMKT--KSHLYTDWSSDE 228
SA R+ S+ EG V + +V +G F + + L + SD+
Sbjct: 190 ISAAPRVASTGLRDSRSV-EGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDD 248
Query: 229 H--------ADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNG 280
+ ADD + ESSPGFDVLVDNE DSEY +R R
Sbjct: 249 NNSFHNGKDADDVLR-----ESSPGFDVLVDNE--------AGDSEYYHVEDRYGRRSQE 295
Query: 281 HFLGYDFEGPIEYDPMYPESEPHEGETYNVHYY-----------------LDNEHILDKV 323
G EYDP + + E + + E LD+
Sbjct: 296 R-------GNSEYDPDFSAIADGDKEALREQRFDSYDRREDRGWGHRRVSSEREDRLDRR 348
Query: 324 REYPGRARERILDS----MLSRKRKLFPMKVSVD-------DCNADLRDYLRKRRVVDGH 372
E IL+S L+++RK M++SV D + D R Y RR
Sbjct: 349 VYAEDERSENILESDLRYRLAKQRKGNGMRLSVGGHDYAAPDSSMD-RGYRESRRDTPRE 407
Query: 373 SIVHSTRRHESSRLMGRIQGRHRGLLLHGR---LASEFGKNYIESHGHKGTLPNGANQHG 429
+ + SSRL GRI+ R R G SE G++ E LP+ G
Sbjct: 408 NSI------SSSRLQGRIKLRERSNGEEGHHFDRRSERGRDRSE-------LPS----QG 450
Query: 430 WARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEK 489
R L ++H G + +R R+ ER+S+ + +S E K
Sbjct: 451 RLRDRIKGRLEENHSGNQ--ERGFGAPWARRREMEDERKSAPKSSR---EESKPEPSLGK 505
Query: 490 KKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKR 526
+K+ E H K R+ F P P SEILK K+
Sbjct: 506 RKSFEEDHHSHK-----RSRDSFAAPLPFSEILKRKK 537
>gi|242077620|ref|XP_002448746.1| hypothetical protein SORBIDRAFT_06g032480 [Sorghum bicolor]
gi|241939929|gb|EES13074.1| hypothetical protein SORBIDRAFT_06g032480 [Sorghum bicolor]
Length = 690
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 245/585 (41%), Gaps = 109/585 (18%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE +R+TDCVYFLASPLTCKKG +C++RH+E AR+NPRDCWYWL G+C+NP+C FRHP
Sbjct: 20 EEEALRRSTDCVYFLASPLTCKKGNECDFRHSEGARMNPRDCWYWLNGSCLNPKCAFRHP 79
Query: 62 PLDAHVTEAPSESVSLPCQSSIPVN--KTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG 119
P+D + AP+ + N K +PCY++ G C +GDRC F HGP N
Sbjct: 80 PIDG-LFGAPTSGLPPVSAHYGAYNPGKQMVPCYYFQKGNCLKGDRCPFYHGPQTSGNN- 137
Query: 120 KSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAP 179
++ A+ +T L ++ + +P N ++ ++ + H+ +S
Sbjct: 138 -PAEQAAKITSFPLEPSQAQKNEEAAAP-----NNSTQQEARITDNWTT---AHISKSGA 188
Query: 180 KRIPERRAS------PQISLSEGETVAVVKS----DSMVAAEGFMKTKSHLYTDWS---- 225
IP AS P + T+A KS D + + + + DW+
Sbjct: 189 GAIPADVASNAVKSGPNSEQAPSNTLAAKKSFTTEDHPMHYQNQVPVEGEPVQDWNQNFE 248
Query: 226 ---SDEHADDHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHRELNGH 281
+D+ + E ++ L ESSPGFDVLVDN+ D + YL RE+
Sbjct: 249 MPPTDDLPQNSREADDFLGESSPGFDVLVDNDG--------DGAAYLHDEEDFGREM--- 297
Query: 282 FLGYDFE-GPIEYDPMYPESEPHEGETYNVHYYLDNEHILDKVREYPG-------RARER 333
+ D+E P ++D HE E +N + ++ +Y G + ER
Sbjct: 298 YPVEDYEYAPADFDIR----AHHESEQFNNGMGENG-----RIGQYDGYERKRRRSSSER 348
Query: 334 ILDSMLSRKRKLFPMKVSVDDCN-ADLRDYLRKRRVVDGHSIV-----HSTRRHESSRLM 387
LD R+ ++ D + +DLR LR+RR+ + + + R R
Sbjct: 349 SLDRPYHPDRRFLHRELDRDKIDGSDLRHQLRRRRINGPSTAISPEQANGDRHWRDERYR 408
Query: 388 GRIQGRH----------RGLLLHGRLASEF-----GKNYIESHGHKGTLPNGANQH---- 428
R G H RG L RL + + ++
Sbjct: 409 ERPHGGHHTHRDRYQGPRGSTLSSRLQARIKLPRRSPDRVDIRFEDERDRRRLRDRFSPV 468
Query: 429 -------GWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKS 481
G R S N R H + L+ H + RR + F ++
Sbjct: 469 RRMDFHGGRHRESGQNQERSHRRSSELVSTVRHADGL------KARRDAVDSAHFAARRN 522
Query: 482 LAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKR 526
L E R+ E S DF+GPKPLS IL+ KR
Sbjct: 523 LGEPRKGNGIVE------------SEASLDFEGPKPLSVILQRKR 555
>gi|90265251|emb|CAH67704.1| H0624F09.12 [Oryza sativa Indica Group]
gi|125550180|gb|EAY96002.1| hypothetical protein OsI_17873 [Oryza sativa Indica Group]
Length = 711
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 141/277 (50%), Gaps = 28/277 (10%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE +RNTDCVYFLASPLTCKKG +C++RH++ AR+NPRDCWYWL NC+NP+C FRHP
Sbjct: 27 EEEALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHP 86
Query: 62 PLDAHVTEAPSESVSLPCQSSIPVN--KTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG 119
P+D + AP+ + P N K +PCY++ G C +GDRC+F HGP + N
Sbjct: 87 PIDG-MFGAPTTGMPAVSSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQSVGNN- 144
Query: 120 KSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSE--APL-----KLAVDVRVQPKG 172
S+ V+ L + +T D G + N + AP+ K AVD
Sbjct: 145 -PSEQVVKVSSLPLEQLQTQKNDLLGIKDSVQSTNSIQHGAPITNERGKTAVDRSTVNSA 203
Query: 173 HLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEG--------FMKTKSHLYTDW 224
A + P+ + T A +K ++ G S DW
Sbjct: 204 RTATVAIPVASNAMSCPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDW 263
Query: 225 S-------SDEHADDHVEPEERL-ESSPGFDVLVDNE 253
+ +D+ + E +E L ESSPGFDVLVDN+
Sbjct: 264 NQSYEMPPADDLPQNSREADELLGESSPGFDVLVDND 300
>gi|297738284|emb|CBI27485.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 91/132 (68%), Gaps = 11/132 (8%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE+ KRNTDCVYFLASPLTCKKG +CEYRH+E AR+NPRDCW+WL GNC+NP+C FRHP
Sbjct: 20 EEDALKRNTDCVYFLASPLTCKKGSECEYRHSEHARMNPRDCWFWLNGNCLNPKCSFRHP 79
Query: 62 PLDAHVTEAPSESVSLPCQSSIPVN----KTSIPCYFYFNGFCSRGDRCSFLHGPDGIAP 117
PLD + + P SSIP + K S+PC F+ G C +GDRC+FLHGP+ P
Sbjct: 80 PLDGLL----GTQATTPSGSSIPTSHSSGKQSVPCIFFQKGLCLKGDRCAFLHGPN---P 132
Query: 118 NGKSSKSASAVT 129
G A A T
Sbjct: 133 TGNKIPQAPAAT 144
>gi|242089725|ref|XP_002440695.1| hypothetical protein SORBIDRAFT_09g005300 [Sorghum bicolor]
gi|241945980|gb|EES19125.1| hypothetical protein SORBIDRAFT_09g005300 [Sorghum bicolor]
Length = 507
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 238/540 (44%), Gaps = 76/540 (14%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDA 65
++ NTDCV FLAS C KG +CE+RH E AR N + CWYW GNC+NP C FRHPPL++
Sbjct: 15 RRSNTDCVSFLASRFACTKGANCEFRHCEGARFN-QSCWYWFRGNCVNPSCTFRHPPLES 73
Query: 66 -HVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
+ T+ ++ + +SI K + PCYFY+N +C +GD CSFLH P G SS++
Sbjct: 74 LNRTKPLADPLVSYASASI---KAANPCYFYYNSYCKKGDSCSFLHDPITRNNVGISSEA 130
Query: 125 ASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPE 184
+ S L++N T AG+ ++ + D V P Q +P R +
Sbjct: 131 LT----SNLAKNSTPAGNEM---------------IESSKDALVNP----CQGSPDRTKD 167
Query: 185 RRAS-PQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESS 243
++ P S + + + + + G+M KS +D SS + +H E + +SS
Sbjct: 168 HQSGLPASSSPKHNGLILNAPQTSIDTVGYM--KSFTLSDQSSGDSGIEHAEYDISRDSS 225
Query: 244 PGFDVLVDNENRAENLGFEDDSEYLLATNREHRELN-GHFLGYDFEGPIEYDPMYPESEP 302
PGFDVLVD + L D E+ R+ L+ H +G I Y Y ++E
Sbjct: 226 PGFDVLVD-----DGLSNMIDLEHQSTQERDTEVLHVKHHVG----DSIVYGLDYYDAE- 275
Query: 303 HEGETYNVHYYLDNEH--ILDKVREYPGRARERILDSMLSRKRKLFPMKVSVDDCNADLR 360
YN EH LD G R ML + L C +
Sbjct: 276 -----YNEQGLRGFEHGSCLDYFEGVQGHDRVTTSGHMLHNRINLVN-----PSCEEHVP 325
Query: 361 DYLRKRRVVDGH--------SIVHSTRRHESSRLMGRIQGRHRGLLLHGRLASEFGKNYI 412
+ R ++D H I H ++R R GR++ +H + G I
Sbjct: 326 RFFNPRSLMDSHVGSNHQNSQIGHISKRPPERRGAKGNNGRNKRCRIH---EARNGSEEI 382
Query: 413 ESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKP--FSSERRSS 470
+ T P Q+ + +G++ RK A S P +S+
Sbjct: 383 D------TRPTHDMQNSLIGDCSRPLACATFRGQKKKSRKKQRHARSAGPSKYSTANVKH 436
Query: 471 QTETAFTGPKSLAEIREEKKKAEESGGH---FGKVGHLSRTLTDFQGPKPLSEILKEKRR 527
F GPK+LA+I+EEK +++ S H G + DF+GPK LSE+LK K R
Sbjct: 437 LDPEDFMGPKTLAQIKEEKCRSKSSASHPTVHMPHGSGRSSSNDFEGPKSLSELLKVKGR 496
>gi|242063614|ref|XP_002453096.1| hypothetical protein SORBIDRAFT_04g038370 [Sorghum bicolor]
gi|241932927|gb|EES06072.1| hypothetical protein SORBIDRAFT_04g038370 [Sorghum bicolor]
Length = 692
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 14/125 (11%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE ++R+TDC+YFLASPLTCKKG +C+YRH++ AR+NPRDCWYW GNC NP+C FRHP
Sbjct: 11 EEARRRRSTDCIYFLASPLTCKKGSECDYRHSDAARMNPRDCWYWFHGNCANPKCSFRHP 70
Query: 62 PLDAHV----------TEAPSESVSLPCQ---SSIP-VNKTSIPCYFYFNGFCSRGDRCS 107
PLD P S S+P Q S++P + K ++PCY++ G C++GDRC+
Sbjct: 71 PLDNLAGAPTIPRPAQQPVPQASASVPAQPHGSAVPAIAKQAVPCYYFQKGMCTKGDRCT 130
Query: 108 FLHGP 112
FLH P
Sbjct: 131 FLHAP 135
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 23/95 (24%)
Query: 466 ERRSSQTETA-FTGPKSLAEIREEKKKAEESGGHFGKVGHL-----------SRTLTDFQ 513
E S TE+ F GPKSLAE++ KK G V L SR F+
Sbjct: 448 ENSSEDTESLNFAGPKSLAELK--AKKGVGRSGEDAIVKGLGSSRVTSEIVSSREAAPFE 505
Query: 514 GPKPLSEILKEKR---------RPGTVSDADTWSC 539
GPKPLS ILK KR +PG + +AD ++
Sbjct: 506 GPKPLSTILKRKREAASEIPAAQPGIIQEADNYAA 540
>gi|226498904|ref|NP_001152409.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|195655985|gb|ACG47460.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 649
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 14/125 (11%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE ++R+TDC+YFLASPLTCKKG +CEYRH++ AR+NPRDCWYW GNC NP+C FRHP
Sbjct: 11 EEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFHGNCANPKCSFRHP 70
Query: 62 PLD----AHVTEAPSE-------SVSLPC--QSSIPVN-KTSIPCYFYFNGFCSRGDRCS 107
PLD A T P++ S S+P Q S+P K +PCY++ G C++GDRC+
Sbjct: 71 PLDNMAGAPTTPRPAQQSVPHQASASVPAQPQGSVPATAKQGVPCYYFQKGMCTKGDRCA 130
Query: 108 FLHGP 112
FLH P
Sbjct: 131 FLHAP 135
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 22/84 (26%)
Query: 476 FTGPKSLAEIREEKKKAEESGGHFGKVGHL-----------SRTLTDFQGPKPLSEILKE 524
F GPKSLAE++ KK G V L SR F+GPKPLS ILK
Sbjct: 438 FAGPKSLAELK--AKKGVGRSGEDAVVKGLGSSRMTSEIVWSREAASFEGPKPLSAILKR 495
Query: 525 KR---------RPGTVSDADTWSC 539
KR +PG +AD ++
Sbjct: 496 KREPASEIPAAQPGITQEADNYAA 519
>gi|413923947|gb|AFW63879.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 649
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 14/125 (11%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE ++R+TDC+YFLASPLTCKKG +CEYRH++ AR+NPRDCWYW GNC NP+C FRHP
Sbjct: 11 EEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFHGNCANPKCSFRHP 70
Query: 62 PLD----AHVTEAPSE-------SVSLPC--QSSIPVN-KTSIPCYFYFNGFCSRGDRCS 107
PLD A T P++ S S+P Q S+P K +PCY++ G C++GDRC+
Sbjct: 71 PLDNMAGAPTTPRPAQQSVPHQASASVPAQPQGSVPATAKQGVPCYYFQKGMCTKGDRCA 130
Query: 108 FLHGP 112
FLH P
Sbjct: 131 FLHAP 135
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 22/84 (26%)
Query: 476 FTGPKSLAEIREEKKKAEESGGHFGKVGHL-----------SRTLTDFQGPKPLSEILKE 524
F GPKSLAE++ KK G V L SR F+GPKPLS ILK
Sbjct: 438 FAGPKSLAELK--AKKGVGRSGEDAVVKGLGSSRMTSEIVWSREAASFEGPKPLSAILKR 495
Query: 525 KR---------RPGTVSDADTWSC 539
KR +PG +AD ++
Sbjct: 496 KREPASEIPAAQPGITQEADNYAA 519
>gi|357144084|ref|XP_003573165.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Brachypodium distachyon]
Length = 657
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 243/570 (42%), Gaps = 102/570 (17%)
Query: 9 NTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD---- 64
+TDC+Y+LASPLTCKKG +CEYRH++ AR+NPRDCWYW GNC NP+C FRHPPLD
Sbjct: 25 STDCIYYLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCTNPKCSFRHPPLDDLLG 84
Query: 65 ----AHVTEAPSESVSLPCQS--SIPVNKTS---IPCYFYFNGFCSRGDRCSFLHGPDGI 115
++ V +P Q+ SIP + T+ +PCY++ G C++G+ C+F H P +
Sbjct: 85 APANPRASQQAGSQVPVPAQAPGSIPASSTAKPGVPCYYFQKGMCAKGNMCAFSHVPQ-V 143
Query: 116 APNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLL 175
A N +SA +L + + + P + N + + A D + H
Sbjct: 144 AGNPALQQSAKVFAPALQPQPQLKNSNSWIKPHNSAQQNTT----RTAHD-ELNVSAHNG 198
Query: 176 QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVE 235
+ A K+ RA + + + + S + TKS+ D+ A++ +E
Sbjct: 199 KPAQKQNLTSRAYHSSGIYQNHNNSYLLSGA---------TKSYQTQPSVEDDSAENVME 249
Query: 236 PEERL-ESSPGFDVLVDNENRAENLGFEDDSEYLLATNRE-----HRELNGHFLGYDFEG 289
E + E S G VLV + + F++D T+ E HR+ +G GY+ E
Sbjct: 250 TGEFVREPSAGSSVLVGSVDEDAERSFKEDHSSYPHTSLEKNTGMHRQTHG---GYELE- 305
Query: 290 PIEYDPMYPESEPHEGETYNVHYYLDNEHILDKVREYPGRARERILDSMLSRKRKLFPMK 349
PH L +E L + P A L L ++R+L K
Sbjct: 306 -----------RPHRSSANR----LLSEGRLSQREPLPATADSSDLRHRLLKQRRLNNPK 350
Query: 350 VSVDDCNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGRHRGL---LLHGR--LA 404
+ +V D H RH R Q H G LHGR L
Sbjct: 351 TT---------------QVPDKQDSYHEEERHNHHRRREEEQATHNGFSRSRLHGRIKLP 395
Query: 405 SEFGKNYIESHGHKGTLPNG-ANQHGWARHSKSNILRQHHKGKRLLKRKS-----HLSAI 458
E + + H K P ++ G + ++++ + H RL R + H+ +
Sbjct: 396 GESSLDRLGPHPEKERGPRARLDRRGLSPPKQTDLRGKLH--DRLKARSNEDVPGHVRSS 453
Query: 459 SRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGK-----VGHLSRTLTD-- 511
K S E S F+GPKSLAE+R KK A S H K + R ++
Sbjct: 454 VVKANSDEDAGSLN---FSGPKSLAELR-AKKVASSSREHTLKSADPRIAEPVRMTSEIV 509
Query: 512 ----------FQGPKPLSEILKEKRRPGTV 531
F PKPLS+ILK KR +
Sbjct: 510 ANRDSPYPVPFDSPKPLSDILKRKREAASA 539
>gi|326513378|dbj|BAK06929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 695
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 174/602 (28%), Positives = 253/602 (42%), Gaps = 127/602 (21%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE +RNTDCVYFLASPLTCKKG C++RH+E AR+NPRDC+YWL GNC+NP+C FRHP
Sbjct: 17 EEEALRRNTDCVYFLASPLTCKKGNQCDFRHSEGARMNPRDCYYWLNGNCLNPKCSFRHP 76
Query: 62 PLDAHVTEAPSESVSLPCQSSIPVN--KTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG 119
P+D + AP+ + N K +PCY++ G C +GD+C F HGP N
Sbjct: 77 PIDG-MFGAPTPGIPALSSHYAAYNSGKQMVPCYYFQKGNCIKGDKCPFSHGPQTAGNN- 134
Query: 120 KSSKSASAVTDSLLSENKTSAGD--------------GTGSPPTEIRPNPS--------- 156
+ + V+ L + +T + G P + R S
Sbjct: 135 -PPEQVAKVSSFPLEQPQTQKNEFLGVKEFAQTNHLVQQGGPIIDDRSKMSVNRAAANFA 193
Query: 157 ------EAPLKLAVDVRVQPK-GHLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVA 209
+ V+ PK G + S P A+ + S GE +++
Sbjct: 194 RTAAAAMPAELASSAVKSLPKSGRVQNSMPA------ANKSVGTSSGEDHRECYQNNLPV 247
Query: 210 AEGFMKTKSHLYTDWSSDEHADDHVEPEERL-ESSPGFDVLVDNENRAENLGFEDDSEYL 268
M+ + Y D+ +D + ++ L ESSPGFDVLV N+ D YL
Sbjct: 248 ETDPMQDWNQPYQTPPQDDLPEDSRDADDLLGESSPGFDVLVANDT--------DAGAYL 299
Query: 269 LATNREHRELNGHFLGYDFEGPIEYDPMYPESEP-HEGETYNVHYYLDNEHILDKVREYP 327
+ R++ Y E EY P E +P HE E +N + I+ Y
Sbjct: 300 HDADDFGRDI------YPVED-YEYAPADFEIQPHHERELFNG--MGEQGPIVQMYDGYD 350
Query: 328 GRAR----ERILD-----SMLSRKRKLFPMKVSVDDCNADLRDYLRKRRV---------- 368
+ R ER LD SR+R+ P+++ +DLR LR+R++
Sbjct: 351 RKRRRTSSERNLDRPSYSERRSRQRETGPVEID----GSDLRHRLRRRKINGSPGISPER 406
Query: 369 ---------------VDGHSIVHSTRRHESSR---LMGRIQGRHRGLLLHG----RLASE 406
DGH RH+ R L R+QGR + L G R+ +
Sbjct: 407 IGESRRRDDRHRERAYDGHRT--HRERHQGPRGSTLSSRLQGR---IKLPGRSPDRVDAR 461
Query: 407 FGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLLKRKSHLSAISRKPFSSE 466
+ P RH ++ HH+ +R+ +R S ++ +R
Sbjct: 462 SERERDRRQLRDRLSPVMHMDIQGGRHREAG----HHQ-ERVRQRSSERASSARMADGKH 516
Query: 467 RRSSQTET-AFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEK 525
R + T++ F G K E +KA G V S DF+GP PLS IL+ K
Sbjct: 517 SRRNVTDSLNFAGRKDFG---PESRKAN------GSV--QSEASLDFEGPTPLSVILQRK 565
Query: 526 RR 527
R+
Sbjct: 566 RQ 567
>gi|357129676|ref|XP_003566487.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 34-like [Brachypodium distachyon]
Length = 499
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 153/298 (51%), Gaps = 36/298 (12%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPL- 63
L++ NTDCV+FL S C KG CEYRH + AR NP +CWYW GNC+NP C FRHPPL
Sbjct: 15 LRRSNTDCVFFLVSNFACNKGSKCEYRHCKGARFNPTNCWYWFHGNCVNPSCTFRHPPLE 74
Query: 64 DAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSK 123
+ + T++ ++ SL +S+ KT+ PCYFY N C++GD C FLH P P
Sbjct: 75 NLNRTKSLADQPSLCGSASV---KTANPCYFYHNSCCTKGDHCPFLHEPP--TPKNVVGV 129
Query: 124 SASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIP 183
S+ A T + + N+ S GD + NP + HL K +P
Sbjct: 130 SSEATTFN-PAVNENSVGDEMVEVSKDAHANPCQG-----------NSYHLKTCHSKEVP 177
Query: 184 ERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLESS 243
E ++P+ GE + + S+V E +MK + Y +S + +H E ++ +SS
Sbjct: 178 E-LSNPEF----GEAIPIAPETSVVTGE-YMKCSTLSYQ--TSGDSTMEHSEQDDCRDSS 229
Query: 244 PGFDVLVDNENRAEN-LGFEDDSEYLLATNREHRELNGHFLGYDFEGPIEYDPMYPES 300
PGFDVLVD+ +N LG + LA R+ + L+ YD P YD Y +S
Sbjct: 230 PGFDVLVDDGGLNKNDLGLQ------LARKRDVQVLHAK---YDIGVPNCYDQDYYDS 278
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 465 SERRSSQTETAFTGPKSLAEIREEKKKAEES-GGHFGKVGHLSRTLTDFQGPKPLSEILK 523
S R S T FTGPK+L++I+EEK ++ S ++ H DF+GPKPL+E+ K
Sbjct: 433 SARDSEHPRTDFTGPKTLSQIKEEKCISKSSFSPSAARMPHERSFSYDFEGPKPLTELHK 492
Query: 524 EK 525
K
Sbjct: 493 GK 494
>gi|226530530|ref|NP_001151510.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|195647318|gb|ACG43127.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|413919910|gb|AFW59842.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 679
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 168/568 (29%), Positives = 244/568 (42%), Gaps = 81/568 (14%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EEE +R+TDCVYFLASPLTCKKG +C++RH+E AR+NPRDCWYWL G+C+NP+C FRHP
Sbjct: 15 EEEALRRSTDCVYFLASPLTCKKGNECDFRHSEGARMNPRDCWYWLNGSCLNPKCAFRHP 74
Query: 62 PLDAHVTEAPSESVSLPCQS----SIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAP 117
P+D + AP+ LP S + + K +PCY++ G C +GDRC F HGP
Sbjct: 75 PIDG-LFGAPTS--GLPPVSAHYGAYNLGKQMVPCYYFQKGNCLKGDRCPFYHGPQ--TA 129
Query: 118 NGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQS 177
+ ++ A+ V+ L ++ + +P + + ++ V G +
Sbjct: 130 SNDLAEQAAKVSSFPLEPSQAQNNEEAVAPNNSTQQEARMTENRTSIHVSKSGVG----A 185
Query: 178 APKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHL------YTDWS------ 225
P + P + + + + S + M ++ + DW+
Sbjct: 186 TPADVASNALKPGTNFEQAPSNTLAAKKSSTTEDHPMHYQNQVPVEIDPVKDWNQNFEVS 245
Query: 226 -SDEHADDHVEPEERL-ESSPGFDVLVDN-----ENRAENLGFEDDSEYLLA--TNREHR 276
+D D E ++ L ESSPGFDVLVDN E+ A ++ +D EY+ + R H
Sbjct: 246 PTDYLPQDSREADDILGESSPGFDVLVDNDVDVAEDFARDMYPVEDYEYVTSDFDARAHH 305
Query: 277 ELNGHFLGYDFEGPIEYDPMYPESEPHEGETYNV--HYYLDNEHI---LDKVREYPGRAR 331
E G G I Y N+ HY+ D + LD+ G
Sbjct: 306 ESEQFNDGMGVNGRIGQYDGYERKRRRSSSERNLDRHYHPDGRFLHRELDR-----GEID 360
Query: 332 ERILDSMLSRKRKLFP-MKVSVDDCNADL--RDYLRKRRVVDGHSIVHSTR-RHE----- 382
L L R+R P +S + N D RD + R GH H+ R R++
Sbjct: 361 GSDLRHQLRRRRINGPSTTISPERANGDRHGRDEPYRERAHGGH---HTYRDRYQGPRGS 417
Query: 383 --SSRLMGRIQGRHRGLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKS--NI 438
SSRL RI+ R R+ + F P RH ++ N
Sbjct: 418 NLSSRLQARIKLPRRSP---DRVDTRFEDERDRRRFRDMFSPMRRMDFHGGRHQEAGHNQ 474
Query: 439 LRQHHKGKRLLKRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGH 498
R H K L+ H + S RR + T F ++L E R+ E
Sbjct: 475 ERGHRKLSELVSTVRHADGL------SARRDAVGSTHFAARRNLGEPRKANGLVE----- 523
Query: 499 FGKVGHLSRTLTDFQGPKPLSEILKEKR 526
S DF+GPKPLS IL+ KR
Sbjct: 524 -------SEASLDFEGPKPLSVILQRKR 544
>gi|302818936|ref|XP_002991140.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
gi|300141071|gb|EFJ07786.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
Length = 716
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 8/105 (7%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
K+NTDCVYFLASPLTCKKG +CE+RH+E AR+NPRDCWYW++G+C+N C FRHPPL+A
Sbjct: 34 KKNTDCVYFLASPLTCKKGEECEFRHSETARINPRDCWYWVSGSCLNRDCPFRHPPLEA- 92
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
P Q NK PCYF+ G+C++GDRC FLHG
Sbjct: 93 -------GNPTPGQQQPASNKGRTPCYFFIQGYCAKGDRCPFLHG 130
>gi|326514630|dbj|BAJ96302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 12/122 (9%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
EE ++R TDC+Y+LASPLTC KG +CEYRH++ AR+NPRDCWYW GNC N +C FRHP
Sbjct: 20 EEARRRRGTDCIYYLASPLTCNKGSECEYRHSDAARVNPRDCWYWFNGNCANAKCSFRHP 79
Query: 62 PLD--------AHVTEAPSESVSLPCQSSIPVNKTS---IPCYFYFNGFCSRGDRCSFLH 110
PLD + P+ V +P + ++P N T+ +PCY++ G C++G+ C+F H
Sbjct: 80 PLDDLLGAPATPRAPQQPAPQVPVPAK-AVPPNGTAKPVVPCYYFQKGMCAKGNLCTFSH 138
Query: 111 GP 112
GP
Sbjct: 139 GP 140
>gi|357478115|ref|XP_003609343.1| Ein3-binding f-box protein [Medicago truncatula]
gi|355510398|gb|AES91540.1| Ein3-binding f-box protein [Medicago truncatula]
Length = 1052
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 19/249 (7%)
Query: 277 ELNGHFLGYDFEGPIEYDPMYPESEP-HEGETYNVHYYLDNEHILDKVREYPGRARERIL 335
ELN +LGY+F+ +YD M ++ +E +TY+ + D + R+ G RE +L
Sbjct: 746 ELNEQYLGYEFKNTNDYDTMCSGADILYERKTYDDYRRFDRDFTSPSERKVCGYPREMVL 805
Query: 336 DSMLSRK--RKLFPMKVSVDDCNADLRDYLRKRRVVDGHSIVHSTRRHESSRLMGRIQGR 393
D++ SRK R + D + DLR +LR+ R V+ RRHESS LM + + R
Sbjct: 806 DTIFSRKSIRMSTSEMAACDYSDLDLRHHLRRHREVNSPPDTGLLRRHESSSLMVQNRER 865
Query: 394 HR----GLLLHGRLASEFGKNYIESHGHKGTLPNGANQHGWARHSKSNILRQHHKGKRLL 449
H+ G + RL S+ G + I AN+ R + + R+H++ K
Sbjct: 866 HQRQDIGQRQNRRLTSQVGFSSIREVEDLSI----ANKRRLFRPYQQSRPRKHYREKPA- 920
Query: 450 KRKSHLSAISRKPFSSERRSSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTL 509
K S SRKP ++RS Q AF+GPK+LAEI+EEKKK+ ES H +
Sbjct: 921 KWPFPSSKESRKPIVKQQRSIQKSNAFSGPKTLAEIKEEKKKSGES-------SHCESSS 973
Query: 510 TDFQGPKPL 518
FQ PKPL
Sbjct: 974 AGFQDPKPL 982
>gi|359484655|ref|XP_003633139.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Vitis vinifera]
Length = 40
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 26 LDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
+DCEYRH+E ARLNPRDCWYWL+G+C+NP C FRHP
Sbjct: 1 MDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHP 36
>gi|307182416|gb|EFN69652.1| Zinc finger CCCH domain-containing protein 11A [Camponotus
floridanus]
Length = 577
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
++ E +N DC +F S TCKKG C YRH A C YW GNC+N C FRH
Sbjct: 18 LQMEHNHKNLDCYFFYYS--TCKKGDFCPYRHEPSALGCETTCTYWQQGNCLNEHCNFRH 75
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
L N+ SIPCY+ R C FLH
Sbjct: 76 MELKK--------------------NRKSIPCYWETQPGGCRKPHCPFLHA 106
>gi|383862171|ref|XP_003706557.1| PREDICTED: uncharacterized protein LOC100881252 [Megachile
rotundata]
Length = 575
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 28/152 (18%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
++ E +NTDC +F S TCKKG +C +RH A C YW G C+ C FRH
Sbjct: 18 LQMEHSHKNTDCYFFYYS--TCKKGDNCPFRHEPSALGCETMCIYWQQGKCLEEHCNFRH 75
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH------GPDG 114
L N+ SIPCY+ R CSF+H D
Sbjct: 76 MELKK--------------------NRKSIPCYWETQPGGCRKPHCSFMHKNARTISSDP 115
Query: 115 IAPNGKSSKSASAVTDSLLSENKTSAGDGTGS 146
I P + ++ ++ L+ + DG+ +
Sbjct: 116 INPVKNTDLTSKSLNQEWLNRQDDTKYDGSST 147
>gi|345492066|ref|XP_001601351.2| PREDICTED: hypothetical protein LOC100116995 [Nasonia vitripennis]
Length = 472
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV 67
+NTDC +F S TC KG C YRH A C YW G+C+N C FRH +D
Sbjct: 6 KNTDCYFFYYS--TCTKGDSCAYRHEASALGCETVCSYWQQGSCLNQHCNFRH--MD--- 58
Query: 68 TEAPSESVSLPCQSSIPVNKTSIPCYF-YFNGFCSRGDRCSFLH 110
I N+ IPCY+ F C + C FLH
Sbjct: 59 ---------------IKKNRKVIPCYWEKFPTGCKKP-HCPFLH 86
>gi|350403198|ref|XP_003486728.1| PREDICTED: hypothetical protein LOC100749870 [Bombus impatiens]
Length = 616
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
++ E +NTDC +F S TC KG +C +RH A C YW G C + C FRH
Sbjct: 18 LQMEHSHKNTDCYFFYYS--TCTKGDNCPFRHEPSALGCETMCVYWKQGKCFDEHCNFRH 75
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
L N+ SIPCY+ R CSF+H
Sbjct: 76 MELRK--------------------NRKSIPCYWETQPGGCRKPHCSFMH 105
>gi|332030659|gb|EGI70347.1| Zinc finger CCCH domain-containing protein 11A [Acromyrmex
echinatior]
Length = 216
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
++ E +N DC +F S TCKKG C YRH A C YW GNC+N C FRH
Sbjct: 52 LQMEHNHKNLDCYFFYYS--TCKKGDFCPYRHEPSALGCETMCTYWQQGNCLNEHCNFRH 109
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
L N+ SIPCY+ R C F+H
Sbjct: 110 MELKK--------------------NRKSIPCYWETQPGGCRKPHCPFMH 139
>gi|307208647|gb|EFN85937.1| Zinc finger CCCH domain-containing protein 11A [Harpegnathos
saltator]
Length = 177
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
++ E +NTDC +F S TCKKG C +RH A C +W G+C+N C FRH
Sbjct: 16 LQMEHNHKNTDCYFFYYS--TCKKGDFCPFRHEPSALGCETMCTFWQQGSCLNEHCNFRH 73
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
L N+ SIPCY+ R CSFLH
Sbjct: 74 MELKK--------------------NRKSIPCYWETQPGGCRKPHCSFLH 103
>gi|432859186|ref|XP_004069055.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 11A-like [Oryzias latipes]
Length = 807
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C P C FRH
Sbjct: 7 DCYFFYYS--TCTKGDSCPFRHCEAAMGNETVCNLWQEGRCFRPTCKFRH---------- 54
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N+ IPCY+ + C+F H
Sbjct: 55 ----------MEITKNRKEIPCYWENQPAGCQKPHCAFFH 84
>gi|410925445|ref|XP_003976191.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 11A-like [Takifugu rubripes]
Length = 781
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 22/106 (20%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ R DC +F S TC KG C +RH E A + C W G C C FRH
Sbjct: 1 MTNRGDDCYFFYYS--TCTKGDSCPFRHCEAALCSETVCTLWQEGRCFRNTCKFRH---- 54
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N+ IPCY+ + C+F H
Sbjct: 55 ----------------MEITHNRKEIPCYWENQATGCQKPHCAFFH 84
>gi|317418905|emb|CBN80943.1| Zinc finger CCCH domain-containing protein 11A [Dicentrarchus
labrax]
Length = 812
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH
Sbjct: 7 DCYFFYYS--TCSKGDSCPFRHCEAAMGNETVCNLWQEGRCFRTVCKFRH---------- 54
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N+ IPCY+ + C+F H
Sbjct: 55 ----------MEITKNRKEIPCYWENQAAGCQKPHCAFFH 84
>gi|299472953|emb|CBN77354.1| CCCH-type Zn finger-containing protein [Ectocarpus siliculosus]
Length = 597
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 28/138 (20%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNC---INPRCGFRHPPLDAHV 67
DC YFL TC KG +C +RH+E AR + C +W G C +N C F HP +
Sbjct: 72 DCYYFLQG--TCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVN--CPFLHPVRGQGM 127
Query: 68 TEAPSESVSLP------------------CQSSIPVNKTSIPCYFYFNGFCSRGDRCSFL 109
Q V+++ C F+ G C++GD C F
Sbjct: 128 GGGRGGRFGGGRGMAAGRGGFGGGRGGPRLQGWETVDRSKQTCVFFVQGKCTKGDACPFS 187
Query: 110 HGPDGIAPNGKSSKSASA 127
H I G S++A A
Sbjct: 188 H---AIPSEGGVSQAAEA 202
>gi|395531168|ref|XP_003767654.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
isoform 2 [Sarcophilus harrisii]
Length = 815
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|395531166|ref|XP_003767653.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
isoform 1 [Sarcophilus harrisii]
Length = 795
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|126306805|ref|XP_001370295.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 1
[Monodelphis domestica]
Length = 813
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|334322269|ref|XP_003340211.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 2
[Monodelphis domestica]
Length = 790
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|426239371|ref|XP_004013595.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 1
[Ovis aries]
gi|426239373|ref|XP_004013596.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 2
[Ovis aries]
Length = 816
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|156231018|ref|NP_001093417.2| zinc finger CCCH domain-containing protein 11A [Bos taurus]
gi|148743852|gb|AAI42498.1| ZC3H11A protein [Bos taurus]
Length = 816
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|351707607|gb|EHB10526.1| Zinc finger CCCH domain-containing protein 11A [Heterocephalus
glaber]
Length = 812
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|432090683|gb|ELK24024.1| Zinc finger CCCH domain-containing protein 11A [Myotis davidii]
Length = 844
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQ-SSIPVNKTSIPCYFYFN 97
+PC + PV + C F+ N
Sbjct: 64 ------IPCYWENQPVGCQKLNCAFHHN 85
>gi|296479385|tpg|DAA21500.1| TPA: zinc finger CCCH-type containing 11A [Bos taurus]
Length = 809
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|74005837|ref|XP_536091.2| PREDICTED: zinc finger CCCH domain-containing protein 11A [Canis
lupus familiaris]
Length = 815
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|355729833|gb|AES09999.1| zinc finger CCCH-type containing 11A [Mustela putorius furo]
Length = 815
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|410986279|ref|XP_003999438.1| PREDICTED: zinc finger CCCH domain-containing protein 11A [Felis
catus]
Length = 816
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|440909219|gb|ELR59151.1| Zinc finger CCCH domain-containing protein 11A [Bos grunniens
mutus]
Length = 816
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|395838804|ref|XP_003792296.1| PREDICTED: zinc finger CCCH domain-containing protein 11A [Otolemur
garnettii]
Length = 816
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|301765634|ref|XP_002918236.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Ailuropoda melanoleuca]
Length = 816
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|354487269|ref|XP_003505796.1| PREDICTED: zinc finger CCCH domain-containing protein 11A
[Cricetulus griseus]
Length = 790
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|348543834|ref|XP_003459387.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Oreochromis niloticus]
Length = 820
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH
Sbjct: 7 DCYFFYYS--TCSKGDSCPFRHCEAAMGNETICSLWQEGRCFRAVCKFRH---------- 54
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N+ IPCY+ + C+F H
Sbjct: 55 ----------MKITKNRKEIPCYWENQPAGCQKPHCAFYH 84
>gi|344277000|ref|XP_003410293.1| PREDICTED: zinc finger CCCH domain-containing protein 11A
[Loxodonta africana]
Length = 817
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|291402575|ref|XP_002717624.1| PREDICTED: zinc finger CCCH-type containing 11A isoform 1
[Oryctolagus cuniculus]
Length = 811
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|149707791|ref|XP_001488602.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 1
[Equus caballus]
Length = 815
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 22/106 (20%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ + DC +F S TC KG C +RH E A N C W G C C FRH +D
Sbjct: 1 MSNQGEDCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEID 58
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+E IPCY+ + C+F H
Sbjct: 59 KKRSE--------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|417404785|gb|JAA49129.1| Hypothetical protein [Desmodus rotundus]
Length = 814
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|335295197|ref|XP_003357426.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 1
[Sus scrofa]
gi|335295199|ref|XP_003357427.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 2
[Sus scrofa]
Length = 816
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|270005286|gb|EFA01734.1| hypothetical protein TcasGA2_TC007327 [Tribolium castaneum]
Length = 357
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 25/114 (21%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
K+N DC ++ S TC KG +C +RH A C +W G C+N C FRH L
Sbjct: 8 KKNNDCYFYYYS--TCAKGDNCTFRHEPSALGCETMCSFWKEGKCLNVHCNFRHMELRK- 64
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLH-GPDGIAPN 118
N+ +IPCY+ G C + C FLH P A N
Sbjct: 65 -------------------NRKAIPCYWESQPGGCLKP-HCPFLHQSPKPAAAN 98
>gi|338724517|ref|XP_003364959.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 2
[Equus caballus]
Length = 812
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|348576844|ref|XP_003474196.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Cavia porcellus]
Length = 789
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C P C +RH +D
Sbjct: 7 DCYFFFYS--TCTKGDACPFRHCEAALGNETVCTLWQEGRCWRPLCRYRHMAVDK----- 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N++ IPCY+ + C+F H
Sbjct: 60 ---------------NRSEIPCYWENQPSGCQKLNCAFHH 84
>gi|291402577|ref|XP_002717625.1| PREDICTED: zinc finger CCCH-type containing 11A isoform 2
[Oryctolagus cuniculus]
Length = 787
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|348576838|ref|XP_003474193.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Cavia porcellus]
Length = 789
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C P C +RH +D
Sbjct: 7 DCYFFFYS--TCTKGDACPFRHCEAALGNETVCTLWQEGRCWRPLCRYRHMAVDK----- 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG----PDGI-APNGKSS--- 122
N++ IPCY+ + C+F H DG+ P K++
Sbjct: 60 ---------------NRSEIPCYWENQPSGCQKLNCAFHHDRGCYVDGLFLPPSKTAVSS 104
Query: 123 --KSASAVTDSLLSENKTSAGDGTGSPPT 149
+S SLL + G GS PT
Sbjct: 105 VLQSPQEAKASLLPVQGSKLGVQAGSSPT 133
>gi|387019985|gb|AFJ52110.1| Zinc finger CCCH domain-containing protein 11A-like [Crotalus
adamanteus]
Length = 801
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG +C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCTKGDNCPFRHCEAALGNETVCVLWQEGRCFRSICRFRHMEIDKKRSEI 64
Query: 71 PS--ESVSLPCQSSIPVNKTSIPCYFYFN 97
P E+ L CQ + C F+ N
Sbjct: 65 PCYWENQPLGCQ--------KLNCAFHHN 85
>gi|348578177|ref|XP_003474860.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
isoform 1 [Cavia porcellus]
Length = 816
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCYRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|348578179|ref|XP_003474861.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
isoform 2 [Cavia porcellus]
Length = 792
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCYRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|114571996|ref|XP_001157064.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 5
[Pan troglodytes]
gi|114571998|ref|XP_001157493.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform
12 [Pan troglodytes]
gi|114572000|ref|XP_001157981.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform
21 [Pan troglodytes]
gi|114572002|ref|XP_001158036.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform
22 [Pan troglodytes]
gi|410228090|gb|JAA11264.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
gi|410262094|gb|JAA19013.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
gi|410300618|gb|JAA28909.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
gi|410350611|gb|JAA41909.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
gi|410350613|gb|JAA41910.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
gi|410350615|gb|JAA41911.1| zinc finger CCCH-type containing 11A [Pan troglodytes]
Length = 810
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCAFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|390359981|ref|XP_800414.3| PREDICTED: uncharacterized protein LOC586837 [Strongylocentrotus
purpuratus]
Length = 1196
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC YF S C KG C YRH E AR N C W G C P C +RH
Sbjct: 7 DCYYFYYS--NCAKGPACPYRHVEEARGNEVTCINWKQGFCYRPSCAYRH---------- 54
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N++ I C++ + C F H
Sbjct: 55 ----------MEITKNRSEIACFWESQPTGCQKPHCPFRH 84
>gi|383411985|gb|AFH29206.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
Length = 810
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|383423309|gb|AFH34868.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
Length = 808
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|209413792|ref|NP_001124854.1| zinc finger CCCH domain-containing protein 11A [Pongo abelii]
Length = 810
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|355558874|gb|EHH15654.1| hypothetical protein EGK_01773 [Macaca mulatta]
gi|355746010|gb|EHH50635.1| hypothetical protein EGM_01498 [Macaca fascicularis]
Length = 812
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|386781523|ref|NP_001247891.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
gi|380788619|gb|AFE66185.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
gi|384940876|gb|AFI34043.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
Length = 810
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|384950634|gb|AFI38922.1| zinc finger CCCH domain-containing protein 11A [Macaca mulatta]
Length = 808
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|71895809|ref|NP_001026201.1| zinc finger CCCH domain-containing protein 11A [Gallus gallus]
gi|73622098|sp|Q5ZJJ1.1|ZC11A_CHICK RecName: Full=Zinc finger CCCH domain-containing protein 11A
gi|53133546|emb|CAG32102.1| hypothetical protein RCJMB04_17l7 [Gallus gallus]
Length = 723
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ K+ DC ++ S TC KG +C +RH E A N C W G C C FRH +D
Sbjct: 1 MSKQGDDCYFYFYS--TCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 58
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLH 110
+E IPC++ G C + + C+F H
Sbjct: 59 KKRSE--------------------IPCFWENQPGGCQKSN-CAFHH 84
>gi|332248086|ref|XP_003273192.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 1
[Nomascus leucogenys]
gi|332248088|ref|XP_003273193.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 2
[Nomascus leucogenys]
Length = 810
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|426333361|ref|XP_004028246.1| PREDICTED: zinc finger CCCH domain-containing protein 11A [Gorilla
gorilla gorilla]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|345320472|ref|XP_001518674.2| PREDICTED: zinc finger CCCH domain-containing protein 11A
[Ornithorhynchus anatinus]
Length = 1114
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 22/106 (20%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ + DC +F S TC KG C +RH E A N C W G C C FRH +D
Sbjct: 1 MSNQGEDCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEID 58
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+E IPCY+ + C+F H
Sbjct: 59 KKRSE--------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|326933546|ref|XP_003212863.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Meleagris gallopavo]
Length = 723
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ K+ DC ++ S TC KG C +RH E A N C W G C C FRH +D
Sbjct: 1 MSKQGDDCYFYFYS--TCNKGDSCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 58
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLH 110
+E IPC++ G C + + C+F H
Sbjct: 59 KKRSE--------------------IPCFWENQPGGCQKSN-CAFHH 84
>gi|296230496|ref|XP_002760719.1| PREDICTED: zinc finger CCCH domain-containing protein 11A isoform 4
[Callithrix jacchus]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|50949975|emb|CAH10530.1| hypothetical protein [Homo sapiens]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|403294914|ref|XP_003938405.1| PREDICTED: zinc finger CCCH domain-containing protein 11A [Saimiri
boliviensis boliviensis]
Length = 787
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|50949963|emb|CAH10525.1| hypothetical protein [Homo sapiens]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|114842410|ref|NP_055642.3| zinc finger CCCH domain-containing protein 11A [Homo sapiens]
gi|73622099|sp|O75152.3|ZC11A_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 11A
gi|17939558|gb|AAH14268.1| Zinc finger CCCH-type containing 11A [Homo sapiens]
gi|168267494|dbj|BAG09803.1| zinc finger CCCH-type containing protein 11A [synthetic construct]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|114145551|ref|NP_001041367.1| zinc finger CCCH domain-containing protein 11A [Rattus norvegicus]
gi|109692290|gb|ABG37973.1| unknown [Rattus norvegicus]
Length = 793
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPMGCQKLNCAFHH 84
>gi|50950047|emb|CAH10566.1| hypothetical protein [Homo sapiens]
Length = 810
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|40788320|dbj|BAA31638.2| KIAA0663 protein [Homo sapiens]
Length = 816
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 13 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 69
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 70 -------------------IPCYWENQPTGCQKLNCAFHH 90
>gi|148232651|ref|NP_001091442.1| zinc finger CCCH-type containing 11A [Xenopus laevis]
gi|141795385|gb|AAI39501.1| LOC100049151 protein [Xenopus laevis]
Length = 794
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 24/101 (23%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG DC +RH E A + C W G C C FRH ++ +E
Sbjct: 7 DCYFYFYS--TCTKGDDCPFRHCEAAVGSETVCTLWKEGQCFRQICKFRHMEMNKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLH 110
IPCY+ C +G+ C+F H
Sbjct: 64 -------------------IPCYWENQPSGCQKGN-CAFHH 84
>gi|13543242|gb|AAH05786.1| Zinc finger CCCH type containing 11A [Mus musculus]
Length = 792
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|402857547|ref|XP_003893314.1| PREDICTED: zinc finger CCCH domain-containing protein 11A [Papio
anubis]
Length = 732
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|115270986|ref|NP_653113.4| zinc finger CCCH domain-containing protein 11A [Mus musculus]
gi|454528546|ref|NP_001263696.1| zinc finger CCCH domain-containing protein 11A [Mus musculus]
gi|73622100|sp|Q6NZF1.1|ZC11A_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 11A
gi|42490806|gb|AAH66163.1| Zc3h11a protein [Mus musculus]
gi|74217034|dbj|BAE26620.1| unnamed protein product [Mus musculus]
gi|343771963|emb|CBW47114.1| zinc finger CCCH type containing 11A [Mus musculus]
Length = 792
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|74198528|dbj|BAE39744.1| unnamed protein product [Mus musculus]
Length = 792
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|45219861|gb|AAH66848.1| Zc3h11a protein [Mus musculus]
Length = 792
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCALWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|26346957|dbj|BAC37127.1| unnamed protein product [Mus musculus]
Length = 492
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|320167549|gb|EFW44448.1| hypothetical protein CAOG_02473 [Capsaspora owczarzaki ATCC
30864]
Length = 991
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLN--PRDCWYWLAGNCINPRCGFRH 60
DC +FL + TC KG C +RH++ AR + P C WLAG+CI+ C RH
Sbjct: 6 DCRFFLTA--TCAKGDHCRFRHSQAARDHGEPVTCPDWLAGSCIDAACLKRH 55
>gi|397504923|ref|XP_003823028.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 11A [Pan paniscus]
Length = 808
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYXFFYS--TCTKGDSCAFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|147810607|emb|CAN76375.1| hypothetical protein VITISV_041938 [Vitis vinifera]
Length = 353
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 36 ARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV-TEAPSESVSLPCQSSIPVNKTSIP 91
AR+NP+D +WL G C+NP+C FR PLD + T+A + P +SSIP ++ P
Sbjct: 78 ARMNPKDYKFWLNGICLNPKCSFRSLPLDGLLETQA-----TTPAESSIPSSQFVAP 129
>gi|49022841|dbj|BAC65623.4| mKIAA0663 protein [Mus musculus]
Length = 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 43 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 99
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 100 -------------------IPCYWENQPVGCQKLNCAFHH 120
>gi|148707694|gb|EDL39641.1| mCG131554, isoform CRA_a [Mus musculus]
Length = 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 43 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 99
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 100 -------------------IPCYWENQPVGCQKLNCAFHH 120
>gi|193587348|ref|XP_001952112.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Acyrthosiphon pisum]
Length = 142
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 3 EELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPP 62
E+ K+N DC ++ S TC KG C +RH A C +W G C N C RH
Sbjct: 2 EKGDKKNNDCYFYYYS--TCMKGDKCPFRHEPQALGCEMVCSFWQNGKCENDHCTLRHME 59
Query: 63 LDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
L N+ +IPCY+ R C+FLH
Sbjct: 60 LKK--------------------NRKAIPCYWEKQPTGCRKPYCAFLH 87
>gi|147834008|emb|CAN68772.1| hypothetical protein VITISV_000857 [Vitis vinifera]
Length = 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 49/217 (22%)
Query: 36 ARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV-TEAPSESVSLPCQSSIPVNKTSIP--- 91
AR+NP+D WL G C+NP+C FR PLD + T+A + P +SSIP ++ P
Sbjct: 4 ARMNPKDYXSWLNGICLNPKCSFRSLPLDGLLETQA-----TTPAESSIPSSQFVAPPAP 58
Query: 92 -------------CYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKT 138
F G +R FL S S + LS +KT
Sbjct: 59 HVPVAAPDTEPPSLKKVFGGLENRTQEQKFLQ------------PSFSKSFEVPLSIDKT 106
Query: 139 SAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPERRASPQISLSEGET 198
+ PPT +R E P A DV G+ + R+ + S S GE
Sbjct: 107 AV------PPTGLR---DELPRYKATDVPPASNGNTANRS-NRMHQSNVSDDHSFQNGEI 156
Query: 199 VAVVKSD-SMVAAEGFMKTK---SHLYTDWSSDEHAD 231
+ + ++ ++ EG +K + +++Y D++S D
Sbjct: 157 LITIMTNITLEVKEGGLKDENIIAYMY-DYTSFNEVD 192
>gi|28278217|gb|AAH46137.1| ZC3H11A protein [Homo sapiens]
Length = 400
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEI 64
Query: 71 P 71
P
Sbjct: 65 P 65
>gi|300121134|emb|CBK21515.2| unnamed protein product [Blastocystis hominis]
Length = 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH--------PP 62
DC YFL + C KG C++RHN R C +L G C +P C F H P
Sbjct: 37 DCWYFLTT--GCLKGDSCKFRHNPKVRNINILCVKYLRGECFDPECPFIHLTSLVLFFVP 94
Query: 63 LDAHVTEAPSESVSLPCQSSIPVNKTSIP------CYFYFNGFCSRGDRCSFLHGPDGIA 116
A T + P P P C F+ G C GD C FLH I
Sbjct: 95 CYAQPTAPHPKPYPKPYPYHYPHPYAPQPQPMQRECAFFKRGCCKNGDNCPFLH----IL 150
Query: 117 PNGKSSKSASAVT 129
P +S S ++V+
Sbjct: 151 PTAATSTSQTSVS 163
>gi|157116638|ref|XP_001658588.1| hypothetical protein AaeL_AAEL007685 [Aedes aegypti]
gi|108876371|gb|EAT40596.1| AAEL007685-PA [Aedes aegypti]
Length = 151
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 26/132 (19%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPL 63
+L + DC +F S TCKKG +CEYRH A + C W G C N C RH
Sbjct: 2 DLPRNLHDCYFFYYS--TCKKGTNCEYRHEPAALGHEETCKLWQEGKCYNRTCTMRH--- 56
Query: 64 DAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSK 123
I +++ PC++ R C F H AP ++
Sbjct: 57 -----------------MKIEKPRSATPCFWEDQPGGCRKPHCVFQHK----APKPQAPA 95
Query: 124 SASAVTDSLLSE 135
S A T S++S+
Sbjct: 96 SHPATTSSMMSQ 107
>gi|335288906|ref|XP_003126782.2| PREDICTED: uncharacterized protein C12orf50 homolog isoform 1
[Sus scrofa]
Length = 469
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W G C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWREGKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|351703924|gb|EHB06843.1| Zinc finger CCCH domain-containing protein 11A, partial
[Heterocephalus glaber]
Length = 632
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ R DC +F S TC KG C +RH + A N C W G C P C +RH +D
Sbjct: 1 MSNRGEDCYFFFYS--TCTKGNMCPFRHCKAALGNETVCPLWEEGRCFQPLCRYRHMRID 58
Query: 65 AHVTE 69
+E
Sbjct: 59 KKSSE 63
>gi|393240356|gb|EJD47882.1| hypothetical protein AURDEDRAFT_144223 [Auricularia delicata
TFB-10046 SS5]
Length = 905
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 29/119 (24%)
Query: 22 CKKGLDCEYRHNEIARLNP--------------RDCWYWLAGNCINPR-CGFRHPPLDAH 66
C G C YRH+ R P C +W AG C + C F H
Sbjct: 14 CMNGSRCPYRHDRDTRTVPSCVPGKSRPSRGSKTPCVFWSAGTCTKGKNCEFSH------ 67
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSA 125
P + S P +S P+ C ++ G C+ G C FLH P G+ P K +S+
Sbjct: 68 --ATPQSTSSGPPHASQPL------CTYFLQGRCAAGQGCKFLHDPAGLMPTSKPPRSS 118
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 9 NTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRD-------CWYWLAGNCINPR-CGFRH 60
T CV++ A TC KG +CE+ H + C Y+L G C + C F H
Sbjct: 46 KTPCVFWSAG--TCTKGKNCEFSHATPQSTSSGPPHASQPLCTYFLQGRCAAGQGCKFLH 103
Query: 61 PPLDAHVTEAPSESV--SLPCQSSIPVNKTS-IPCYFYFNGFCSRGDRCSFLHG 111
P T P S S P PV+ T +PC ++ G C+ +C FLH
Sbjct: 104 DPAGLMPTSKPPRSSEPSFP----APVSPTGHVPCRYFAAGRCTT-VQCPFLHA 152
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 43 CWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C ++ C+N RC +RH D PS +P +S P + PC F+ G C+
Sbjct: 6 CRFYQENKCMNGSRCPYRH---DRDTRTVPS---CVPGKSR-PSRGSKTPCVFWSAGTCT 58
Query: 102 RGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDG-------TGSPPTEIRPN 154
+G C F H +G S T L + + +AG G G PT P
Sbjct: 59 KGKNCEFSHATPQSTSSGPPHASQPLCTYFL--QGRCAAGQGCKFLHDPAGLMPTSKPPR 116
Query: 155 PSEAPLKLAVDVRVQPKGHL 174
SE + V P GH+
Sbjct: 117 SSEP----SFPAPVSPTGHV 132
>gi|73622101|sp|Q5REG6.1|ZC11A_PONAB RecName: Full=Zinc finger CCCH domain-containing protein 11A
gi|55726135|emb|CAH89841.1| hypothetical protein [Pongo abelii]
Length = 811
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 37/100 (37%), Gaps = 21/100 (21%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFFYS-TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE- 64
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 65 -------------------IPCYWENQPTGCQKLNCAFHH 85
>gi|344246139|gb|EGW02243.1| Zinc finger CCCH domain-containing protein 11A [Cricetulus
griseus]
Length = 522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDLRSVMK 64
Query: 71 PSESVSLPCQSSIPV 85
S ++P + PV
Sbjct: 65 VESSENVPSPTHPPV 79
>gi|327271283|ref|XP_003220417.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Anolis carolinensis]
Length = 759
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG +C +RH E A N C W G C C FRH ++ +E
Sbjct: 6 DCYFYYYS--TCSKGNNCPFRHCEAALGNETVCVLWKEGRCFRSVCQFRHMEINKKRSE- 62
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 63 -------------------IPCYWEKQPLGCQKLNCAFHH 83
>gi|449271608|gb|EMC81892.1| Zinc finger CCCH domain-containing protein 11A, partial [Columba
livia]
Length = 466
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ + DC ++ S TC KG C +RH E A N C W G C C FRH +D
Sbjct: 1 MSNQGDDCYFYFYS--TCNKGDSCSFRHCEAALGNETVCTLWQEGRCFRNICRFRHMEID 58
Query: 65 AHVT 68
V+
Sbjct: 59 VSVS 62
>gi|348666013|gb|EGZ05841.1| hypothetical protein PHYSODRAFT_566348 [Phytophthora sojae]
Length = 417
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRH--NEIARLNPRDCWYWLAGNCINPR-CGFRHPPL 63
++ T C +F A C+ G C++ H E ++P C ++L G C R C F H
Sbjct: 14 RKKTPCSFFAAG--KCRNGSSCKFFHAPREDLAVSPLPCKFFLQGACKAGRDCKFSHSAQ 71
Query: 64 DAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
S S + ++ IPC F+ G CS GD+C +LH
Sbjct: 72 AQAAATRVSASTG---EKTVAPGSYGIPCKFFKYGDCSNGDKCPYLH 115
>gi|50949621|emb|CAH10553.1| hypothetical protein [Homo sapiens]
Length = 280
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEI 64
Query: 71 P 71
P
Sbjct: 65 P 65
>gi|328770159|gb|EGF80201.1| hypothetical protein BATDEDRAFT_5960, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 147
Score = 49.3 bits (116), Expect = 0.005, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
CKKG CE+ H + P +CW++ G C NP C + H D+ + E P +
Sbjct: 59 CKKGEVCEFLHEYNMKRMP-ECWFFAKLGECTNPECQYLHIDPDSKIRECPWYARGFCKH 117
Query: 81 SSIPVNKTS--IPCYFYFNGFCSRGDRCSF 108
+ +K + C Y GFC G+ C F
Sbjct: 118 GAECRHKHTRKAACQNYLTGFCPNGESCQF 147
>gi|301115348|ref|XP_002905403.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110192|gb|EEY68244.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 407
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRH--NEIARLNPRDCWYWLAGNCINPR-CGFRHPPL 63
++ T C +F+A C+ G C++ H E ++P C ++L G C R C F H
Sbjct: 14 RKMTPCSFFVAG--KCRNGSSCKFFHASREDLAVSPLPCKFFLRGTCTAGRGCKFSH--- 68
Query: 64 DAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
A A + + + + +PC F+ G C+ GD+C +LH
Sbjct: 69 SAEAQAASTRVSASTGEKTTKPGSYGVPCKFFKYGDCANGDKCPYLH 115
>gi|357609289|gb|EHJ66383.1| hypothetical protein KGM_18866 [Danaus plexippus]
Length = 551
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
++ DC ++ S TC KG +C +RH A C W G C++ C RH L
Sbjct: 25 RKFNDCYFYYYS--TCTKGDNCMFRHEPSALGCETMCTAWQQGKCLDKCCKLRHMELRK- 81
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLHG-----PDGIAPNGK 120
N+ IPCY+ G C + C F+H DGIAP
Sbjct: 82 -------------------NRKQIPCYWENQPGGCQKK-HCPFMHKNPDARSDGIAP--- 118
Query: 121 SSKSASAVTDSLLSENKTSAGDGT 144
S+ A V+ + E G G
Sbjct: 119 -SQPAPVVSAQVGIETAIEVGGGV 141
>gi|396080745|gb|AFN82366.1| zinc finger domain-containing protein [Encephalitozoon romaleae
SJ-2008]
Length = 176
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPC 79
CKKG+ CE+ H +++R+ +C+++ + G C+NP C + H ++ E P + C
Sbjct: 60 CKKGIKCEFMHEYDLSRM--PECYFFSSYGECMNPECNYIHIDPNSSSKECPWYNRGF-C 116
Query: 80 QSSIPVNKTSI---PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
++ + CY YF GFC RG C + H I P + S+S
Sbjct: 117 RNGASCKNKHVRKKLCYNYFLGFCPRGPTCDYGHPKFNINPAREISRS 164
>gi|85690955|ref|XP_965877.1| hypothetical protein ECU01_0430 [Encephalitozoon cuniculi GB-M1]
gi|19068444|emb|CAD24912.1| ZINC FINGER PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449329823|gb|AGE96092.1| zinc finger protein [Encephalitozoon cuniculi]
Length = 176
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPC 79
CKKG+ CE+ H +++R+ +C+++ + G C+NP C + H ++ E P + C
Sbjct: 60 CKKGIKCEFMHEYDLSRM--PECYFFSSYGECMNPECNYIHIDPNSSSKECPWYNRGF-C 116
Query: 80 QSSIPVNKTSI---PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
++ + CY YF GFC +G C + H I+P + S+S
Sbjct: 117 RNGASCKNKHVRKKLCYNYFLGFCPKGLNCDYGHPKFNISPGREISRS 164
>gi|401825077|ref|XP_003886634.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
gi|395459779|gb|AFM97653.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
Length = 176
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPC 79
CKKG+ CE+ H +++R+ +C+++ + G C+NP C + H ++ E P + C
Sbjct: 60 CKKGIKCEFMHEYDLSRM--PECYFFSSYGECMNPECNYIHIDPNSSSKECPWYNRGF-C 116
Query: 80 QSSIPVNKTSI---PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
++ + CY YF GFC RG C + H I P + S+S
Sbjct: 117 RNGASCKNKHVRKKLCYNYFLGFCPRGPDCDYGHPKFNINPAREISRS 164
>gi|118358088|ref|XP_001012292.1| hypothetical protein TTHERM_00105420 [Tetrahymena thermophila]
gi|89294059|gb|EAR92047.1| hypothetical protein TTHERM_00105420 [Tetrahymena thermophila
SB210]
Length = 737
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 37 RLNPRDCWYWLAGNC-INPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFY 95
R C ++L+GNC + +C F H + + P L Q N +I C +Y
Sbjct: 284 RYKTHKCRHFLSGNCTMGEKCNFAHSDKELRDPQDPLPPNVLVGQKIQITNFKTIKCRYY 343
Query: 96 FNGFCSRGDRCSFLHG 111
NG+C ++CSF HG
Sbjct: 344 DNGYCKNSEKCSFAHG 359
>gi|256079051|ref|XP_002575804.1| hypothetical protein [Schistosoma mansoni]
gi|353230859|emb|CCD77276.1| hypothetical protein Smp_044810 [Schistosoma mansoni]
Length = 672
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 27 DCEYRHNE-----IARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
DC + H+ + NP C NP C F HPP+ V +AP V S
Sbjct: 547 DCAFTHSSKKVLPVVSANPAQIVCRFQNRCTNPHCQFYHPPV---VVQAPPIIVR-SSAS 602
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
++PV + IPC Y +G C+ +C FLH
Sbjct: 603 TVPVFNSQIPCR-YGSG-CTNRTKCPFLHS 630
>gi|303388037|ref|XP_003072253.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303301392|gb|ADM10893.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 176
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPC 79
CKKG+ CE+ H +++R+ +C+++ + G C+NP C + H ++ E P + C
Sbjct: 60 CKKGIKCEFMHEYDLSRM--PECYFFSSYGECMNPECNYIHIDPNSSSKECPWYNRGF-C 116
Query: 80 QSSIPVNKTSI---PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKS 124
++ + CY YF GFC +G C + H I P + S+S
Sbjct: 117 RNGASCKNKHVRKKLCYNYFLGFCPKGPTCDYGHPKFNINPGREISRS 164
>gi|402887175|ref|XP_003906978.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Papio anubis]
Length = 468
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|114646119|ref|XP_001165579.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Pan troglodytes]
gi|397516311|ref|XP_003828374.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Pan paniscus]
Length = 468
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|403272061|ref|XP_003927908.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Saimiri boliviensis boliviensis]
Length = 467
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|348605262|ref|NP_001019523.2| uncharacterized protein C12orf50 homolog [Rattus norvegicus]
Length = 469
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F+ S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFVNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|119617813|gb|EAW97407.1| chromosome 12 open reading frame 50, isoform CRA_b [Homo sapiens]
Length = 395
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|35193020|gb|AAH58552.1| Zc3h11a protein, partial [Mus musculus]
Length = 496
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC ++ S TC KG C +RH E A N W G C C FRH +D +E
Sbjct: 7 DCYFYFYS--TCAKGDSCPFRHCEAALGNETVFTLWQEGRCFRQVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPVGCQKLNCAFHH 84
>gi|297263211|ref|XP_002798785.1| PREDICTED: uncharacterized protein C12orf50 homolog [Macaca
mulatta]
Length = 432
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|395820120|ref|XP_003783423.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Otolemur garnettii]
Length = 466
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|354482932|ref|XP_003503649.1| PREDICTED: uncharacterized protein C12orf50 homolog isoform 2
[Cricetulus griseus]
Length = 469
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F+ S TC KG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFVNS--TCIKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|307174074|gb|EFN64761.1| Protein suppressor of sable [Camponotus floridanus]
Length = 1189
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 31/109 (28%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLD 64
Q +T CVY++ C +G DC Y HN + C ++L C +C + H
Sbjct: 255 QDADTICVYYMQG--KCHRGDDCPYSHNALPPRKMELCKFYLMDCCAKRDKCLYMH---- 308
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLHGP 112
PC F+ G C++GD C F H P
Sbjct: 309 -----------------------HDFPCKFFHTGLRCNQGDNCKFSHQP 334
>gi|242011691|ref|XP_002426580.1| predicted protein [Pediculus humanus corporis]
gi|212510729|gb|EEB13842.1| predicted protein [Pediculus humanus corporis]
Length = 106
Score = 47.0 bits (110), Expect = 0.027, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 22/106 (20%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+++RN DC ++ S TC KG C +RH A C YW C N C RH L
Sbjct: 1 MERRNQDCYFYYYS--TCTKGDQCIFRHEPSALGCETVCPYWQQRKCDNWFCSLRHMDLK 58
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N+ +IPC++ R C FLH
Sbjct: 59 K--------------------NRKTIPCFWENQPGGCRKPHCPFLH 84
>gi|170039877|ref|XP_001847746.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863467|gb|EDS26850.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 257
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
DC +F S TCKKG +CEYRH A + C W G C N C RH
Sbjct: 117 DCYFFYYS--TCKKGSNCEYRHEPAALGHEETCKMWQEGKCYNRTCTMRH 164
>gi|321464689|gb|EFX75695.1| hypothetical protein DAPPUDRAFT_55759 [Daphnia pulex]
Length = 250
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 22/103 (21%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV 67
+N DC +F S +C K C +RH A N C YW G C C FRH L
Sbjct: 6 KNDDCYFFYYS--SCTKSDRCPFRHEAAALGNETVCSYWQQGMCSKLHCPFRHMELKK-- 61
Query: 68 TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N++ IPCY+ + C F H
Sbjct: 62 ------------------NRSQIPCYWESQPVGCQKSHCPFFH 86
>gi|332024910|gb|EGI65098.1| Protein suppressor of sable [Acromyrmex echinatior]
Length = 1195
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 31/106 (29%)
Query: 9 NTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHV 67
+T CVY++ C +G DC Y HN + C ++L C +C + H
Sbjct: 267 DTICVYYMQG--KCHRGDDCPYSHNALPPRKMELCKFYLMDCCAKRDKCLYMH------- 317
Query: 68 TEAPSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLHGP 112
PC F+ G CS+GD C F H P
Sbjct: 318 --------------------HDFPCKFFHTGLKCSQGDNCKFSHQP 343
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 24 KGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQSS 82
+G D E++ NE ++ C Y+L GNC C F H D EA + V
Sbjct: 88 RGQDDEFKDNEKTKI----CRYYLQGNCTKGDECKFLHQKDDG---EARPKKV------- 133
Query: 83 IPVNKTSIPCYFYFN-GFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTD 130
CY + N GFC GDRC F H D N + + AV +
Sbjct: 134 ---------CYNFQNTGFCKMGDRCKFSH-DDASKVNADNQANQKAVNE 172
>gi|56758420|gb|AAW27350.1| SJCHGC08873 protein [Schistosoma japonicum]
Length = 265
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 27 DCEYRHNE-----IARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
DC++ H+ + NP C NP C F HPP V P V P
Sbjct: 142 DCQFSHSSKKVLPVLSANPAQIVCRFQNRCANPHCQFYHPP----VVVQPPIIVRSP-MP 196
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLHGP-------DGIAPNGK--SSKSASAVTDSL 132
S+PV +SIPC + C+ +C FLH IAP+ K SS S T+S
Sbjct: 197 SVPVFTSSIPC--RYGSACTNRAKCPFLHSDLPSVDQLKWIAPSKKQQSSNPVSTNTNST 254
Query: 133 LSENKTSAGDG 143
+ TS D
Sbjct: 255 VKSAITSLRDS 265
>gi|351695846|gb|EHA98764.1| Zinc finger CCCH domain-containing protein 11A [Heterocephalus
glaber]
Length = 697
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
+ R DC +F S TC KG C +RH N C W G C P C +RH
Sbjct: 1 MSNRGEDCYFFFYS--TCTKGDMCPFRHCVKPLGNETVCPLWQEGRCFQPLCRYRH 54
>gi|209413723|ref|NP_955980.2| zinc finger CCCH type containing 11A-like [Danio rerio]
Length = 794
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C C FRH +D
Sbjct: 7 DCYFFYYS--TCTKGDSCPFRHCEAAMGSETVCNLWQEQRCFRNVCKFRHMEIDK----- 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N+ I CY+ + C+F H
Sbjct: 60 ---------------NRKEIACYWENQPAGCQKPHCAFHH 84
>gi|294654915|ref|XP_456999.2| DEHA2B00726p [Debaryomyces hansenii CBS767]
gi|199429553|emb|CAG84984.2| DEHA2B00726p [Debaryomyces hansenii CBS767]
Length = 288
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 50/154 (32%)
Query: 22 CKKGLDCEYRHNEI------------------------ARLNPRDCWYWLAGNCINPRCG 57
C+KG C+Y+H++ ++ N C Y+L C+NP+C
Sbjct: 44 CQKGSSCKYKHDQNHIKLCRQYLSNNCQNKNCLLSHSPSQYNTPLCRYFLENKCVNPQCT 103
Query: 58 FRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH---GPD- 113
+ H LP P + + F G CSRG +C F+H PD
Sbjct: 104 YEH---------------VLPKNYDKPNYEIWVCRPFSIGGSCSRGRKCPFMHLFVCPDF 148
Query: 114 ---GIAPNGKSSKSASAVT----DSLLSENKTSA 140
G P GKS A + T S+LS++K+ A
Sbjct: 149 QENGACPRGKSCTLAHSATLSTQRSMLSKDKSEA 182
>gi|448087790|ref|XP_004196412.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
gi|359377834|emb|CCE86217.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
Length = 247
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 46/138 (33%)
Query: 15 FLASPLTCKKGLDCEYRHNEIA------------------------RLNPRDCWYWLAGN 50
FL C KG C+Y H++ + + N C Y+L
Sbjct: 5 FLRRTGFCSKGSQCKYIHDKQSIKLCRSYLSNICYNKNCLLSHTPNQFNAPLCRYFLENK 64
Query: 51 CINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
C N +C F H D + + + SV P F +GFC+RG +C FLH
Sbjct: 65 CTNTKCQFIHSKPDRYEEKGVNISVCRP---------------FAISGFCARGLKCPFLH 109
Query: 111 ---GPD----GIAPNGKS 121
PD G+ P GK+
Sbjct: 110 LFICPDFEEEGVCPRGKT 127
>gi|340383798|ref|XP_003390403.1| PREDICTED: hypothetical protein LOC100634210 [Amphimedon
queenslandica]
Length = 367
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
DC ++ S TC KG C++RH A N C W G C C FRH
Sbjct: 49 DCYFYFYS--TCSKGDKCQFRHCSAAIGNEEICQLWKEGKCKRQACAFRH 96
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPDGI 115
+N T+ CYFYF CS+GD+C F H I
Sbjct: 43 MNPTAEDCYFYFYSTCSKGDKCQFRHCSAAI 73
>gi|395509250|ref|XP_003758915.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like
[Sarcophilus harrisii]
Length = 341
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC +G C +RH E A N C W C C FRH ++ +E
Sbjct: 6 DCYFFFYS--TCTRGDKCPFRHCEAALGNETVCTLWQERRCFRKLCRFRHMEIEKKRSEI 63
Query: 71 PS--ESVSLPCQSSIPVNKTSIPCYFYFN 97
P E+ + CQ + C F+ N
Sbjct: 64 PCYWENQPMGCQ--------KLNCAFHHN 84
>gi|357135268|ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
[Brachypodium distachyon]
Length = 685
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 33/131 (25%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEA 70
C ++L C++G C++ H+ + C ++ G+C+ C + H
Sbjct: 433 CHFYLHG--KCQQGNVCKFSHDTTPLTKSKPCTHFARGSCLKGDDCPYDH---------- 480
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNG--KSSKSASAV 128
E PC + F NG C RGD+C F H +AP S+K A
Sbjct: 481 --ELSKYPCHN------------FLGNGMCLRGDKCKFSH----VAPTADDSSTKDAKKS 522
Query: 129 TDSLLSENKTS 139
SL+SE TS
Sbjct: 523 DASLVSEKLTS 533
>gi|405973361|gb|EKC38080.1| Zinc finger CCCH domain-containing protein 11A [Crassostrea gigas]
Length = 884
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 17/86 (19%)
Query: 25 GLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIP 84
G C +RH E A+ C +W C P C FRH SE V Q+
Sbjct: 3 GDSCPFRHCEAAKATDITCTFWRQKTCTKPNCPFRH-----------SEGV---IQNK-- 46
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLH 110
N+ IPCY+ C F H
Sbjct: 47 -NRAEIPCYWETQPVGCTKTACPFKH 71
>gi|387593869|gb|EIJ88893.1| hypothetical protein NEQG_00712 [Nematocida parisii ERTm3]
gi|387595931|gb|EIJ93554.1| hypothetical protein NEPG_01896 [Nematocida parisii ERTm1]
Length = 148
Score = 45.1 bits (105), Expect = 0.093, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC YF+ S TC +G C YRH++ A+ C W G C +RH D + E
Sbjct: 4 DCFYFITS--TCARGPQCTYRHSQEAKNCQIVCSNWKNGTDCLDACPYRHS--DYQIKEK 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
P ++ CY+ +G C + D C ++H
Sbjct: 60 P-----------------AVECYWETHGGCKKAD-CPYVH 81
>gi|426373629|ref|XP_004053699.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like,
partial [Gorilla gorilla gorilla]
Length = 98
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TCKKG C +RH E A + C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCKKGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|410901545|ref|XP_003964256.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6-like [Takifugu rubripes]
Length = 1131
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 21/69 (30%)
Query: 43 CWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y+L G CI +C F H HV +P K + C FY G+CS
Sbjct: 296 CKYFLEGRCIKGDQCKFEH----EHV---------------VPDKKKEL-CKFYLQGYCS 335
Query: 102 RGDRCSFLH 110
+GD C ++H
Sbjct: 336 KGDNCIYMH 344
>gi|169805994|ref|XP_001827742.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|161779028|gb|EDQ31054.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 226
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 23/105 (21%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYW-LAGNCINPRCGFRHPPLDAHVTE 69
DC YFL S TCK+G +C +RHN +++ C W G C C FRH
Sbjct: 17 DCYYFLYS--TCKRGSNCGFRHNYLSKQCKIICEKWNRTGEC-REECPFRHS-------- 65
Query: 70 APSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDG 114
+ + N++ C+F NG C + + C F H G
Sbjct: 66 ----------RYHLDKNRSEEQCWFEINGGCQK-EFCEFNHTEIG 99
>gi|431892913|gb|ELK03341.1| Zinc finger CCCH domain-containing protein 11A [Pteropus alecto]
Length = 836
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 24 KGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSI 83
+G C +RH E A N C W G C C FRH +D + P +V +P S+
Sbjct: 31 RGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDRVLGLPPGSTVRIP--PSL 88
Query: 84 PVNKTSIPCYFY 95
+N + +P Y
Sbjct: 89 YLNSSILPGSLY 100
>gi|378756206|gb|EHY66231.1| hypothetical protein NERG_00927 [Nematocida sp. 1 ERTm2]
Length = 141
Score = 44.3 bits (103), Expect = 0.15, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC YF+ S C +G++C YRH++ A+ + C W G + C +H D V E
Sbjct: 4 DCFYFMTS--NCARGMNCAYRHSQEAKHSQAVCNNWKNGLDCDESCPNKHS--DYQVKEK 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
P ++ CY+ +G C + D C ++H
Sbjct: 60 P-----------------TVECYWETHGGCRKAD-CPYVH 81
>gi|156230820|gb|AAI51879.1| Zgc:73328 protein [Danio rerio]
Length = 398
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C C FRH +D
Sbjct: 7 DCYFFYYS--TCTKGDSCPFRHCEAAMGSETVCNLWQEQRCFRNVCKFRHMEIDK----- 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N+ I CY+ + C+F H
Sbjct: 60 ---------------NRKEIACYWENQPAGCQKPHCAFHH 84
>gi|47228963|emb|CAG09478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 855
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 21/69 (30%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y+L G CI +C F H HV +P K + C FY G+CS
Sbjct: 5 CKYFLEGRCIKGDQCKFEH----EHV---------------VPDKKKEL-CKFYLQGYCS 44
Query: 102 RGDRCSFLH 110
+GD C ++H
Sbjct: 45 KGDNCIYMH 53
>gi|67624361|ref|XP_668463.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659656|gb|EAL38223.1| hypothetical protein Chro.50279 [Cryptosporidium hominis]
Length = 253
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 26/99 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C YF+ CK G C+++H+ I + CWY+++G C C + H
Sbjct: 41 CTYFIKG--RCKNGSSCQFKHSTIPITKKKLCWYFISGKCSKSDCQYSH----------- 87
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
E PC+ Y GFC C F H
Sbjct: 88 -EISKFPCR------------YLNTVGFCRNLKDCRFSH 113
>gi|255088323|ref|XP_002506084.1| predicted protein [Micromonas sp. RCC299]
gi|226521355|gb|ACO67342.1| predicted protein [Micromonas sp. RCC299]
Length = 567
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 36 ARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTS--IPC 92
R R C YW G C C F H DA A + + + C + P N + PC
Sbjct: 355 GRQGTRPCRYWQLGKCRRGDACDFVHA-GDAGGNRAGASTGAETCPTISPTNAATNATPC 413
Query: 93 YFYFNGFCSRGDRCSFLH 110
F+ G C G RC+F H
Sbjct: 414 RFFLRGRCKSGRRCAFAH 431
>gi|66357760|ref|XP_626058.1| CCCH RNA binding domain involved in RNA metabolism [Cryptosporidium
parvum Iowa II]
gi|46227182|gb|EAK88132.1| CCCH RNA binding domain involved in RNA metabolism [Cryptosporidium
parvum Iowa II]
gi|323509343|dbj|BAJ77564.1| cgd5_1070 [Cryptosporidium parvum]
Length = 253
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 26/99 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C YF+ CK G C+++H+ I + CWY+++G C C + H
Sbjct: 41 CTYFIKG--RCKNGSSCQFKHSAIPITKKKLCWYFISGKCSKSDCQYSH----------- 87
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
E PC+ Y GFC C F H
Sbjct: 88 -EISKFPCR------------YLNTVGFCRNLKDCRFSH 113
>gi|429961347|gb|ELA40892.1| hypothetical protein VICG_02072 [Vittaforma corneae ATCC 50505]
Length = 187
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
DC YFL S TCK+G +C YRHN +A+ N C W + C RH
Sbjct: 29 DCYYFLYS--TCKRGSNCGYRHNPMAKTNTTLCPQWASTKKCTLDCPMRH 76
>gi|332376326|gb|AEE63303.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 25/137 (18%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
++N D ++ S TC KG C +RH A C +W G C+N C FRH L
Sbjct: 8 RKNNDFYFYYYS--TCSKGDSCGFRHEPSALGCETVCSFWKEGKCLNVHCNFRHMELKK- 64
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFN-GFCSRGDRCSFLHGPDGIAPNGKSSKSA 125
N+ +IPCY+ G C + C F+H + +++
Sbjct: 65 -------------------NRKAIPCYWESQPGGCLK-PHCPFMHHATATSTPSENAAEL 104
Query: 126 SAVTDSLLSENKTSAGD 142
+ +++++ EN T A +
Sbjct: 105 NK-SEAVVQENCTQANN 120
>gi|348507314|ref|XP_003441201.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1133
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 21/69 (30%)
Query: 43 CWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y+L G CI +C F H + +P K + C FY G+CS
Sbjct: 300 CKYFLEGRCIKGEQCKFEH-------------------ELVVPDKKKEL-CKFYLQGYCS 339
Query: 102 RGDRCSFLH 110
+GD C ++H
Sbjct: 340 KGDNCIYMH 348
>gi|47938839|gb|AAH71380.1| Zgc:73328 protein, partial [Danio rerio]
Length = 358
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A + C W C C FRH +D
Sbjct: 7 DCYFFYYS--TCTKGDSCPFRHCEAAMGSETVCNLWQEQRCFRNVCKFRHMEIDK----- 59
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
N+ I CY+ + C+F H
Sbjct: 60 ---------------NRKEIACYWENQPAGCQKPHCAFHH 84
>gi|448083154|ref|XP_004195322.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
gi|359376744|emb|CCE87326.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
Length = 247
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 46/138 (33%)
Query: 15 FLASPLTCKKGLDCEYRHNEIA------------------------RLNPRDCWYWLAGN 50
FL C KG C+Y H++ + + N C Y+L
Sbjct: 5 FLRRTGFCSKGSQCKYIHDKQSIKLCRSYLSNVCYNKNCLLSHTPNQFNAPLCRYFLENK 64
Query: 51 CINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
C N +C F H + + + + SV P F +GFC+RG +C FLH
Sbjct: 65 CTNTKCQFIHSKPNKYDEKGVNISVCRP---------------FAISGFCARGLKCPFLH 109
Query: 111 ---GPD----GIAPNGKS 121
PD G+ P GK+
Sbjct: 110 LFICPDFEEEGVCPRGKT 127
>gi|440792430|gb|ELR13652.1| hypothetical protein ACA1_038370 [Acanthamoeba castellanii str.
Neff]
Length = 374
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 79/239 (33%), Gaps = 53/239 (22%)
Query: 7 KRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAH 66
K+ DC +FL C KG+ + I C WL C +P C RHP
Sbjct: 4 KKTEDCYFFLNG--YCSKGV----KDRPI-------CTNWLLEKCNDPDCTDRHP----- 45
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSAS 126
++P K ++N C+R D C F H +P S
Sbjct: 46 ---------------TLPRQKDGSRTLCFYNQACTRPD-CPFFHVGTTASPATPRPDQES 89
Query: 127 AVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPERR 186
+T L + T SP I P +K A R L S P R P +R
Sbjct: 90 ELTAGLTPREASKTTSITTSPTATISPV-----MKTAAGAR-------LASGPVRPPRKR 137
Query: 187 ASPQISL-------SEGETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEE 238
+ L + GET K + + F+K+ + + E EP +
Sbjct: 138 GTALPDLPPRDRVTAVGETGNGAKDSAAAPKQSFVKSFEEILKEKEDQEKGIKPSEPRQ 196
>gi|256077604|ref|XP_002575092.1| hypothetical protein [Schistosoma mansoni]
gi|360045196|emb|CCD82744.1| hypothetical protein Smp_037380 [Schistosoma mansoni]
Length = 307
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV 67
R C ++L CKKG DCE+ H P ++ G C+N C F H + V
Sbjct: 64 RTVVCKHWLRG--LCKKGDDCEFLHEYDMTKMPECYFFSKFGECMNKECPFLHIDPASKV 121
Query: 68 TEAPSESVSLPCQSSIPVNK--TSIPCYFYFNGFCSRGDRCSFLH 110
+ P + N+ + C Y NGFC +G C + H
Sbjct: 122 QDCPWYDRGFCRNGPLCRNRHVRRVACKNYINGFCPKGRECKYAH 166
>gi|171694724|ref|XP_001912286.1| hypothetical protein [Podospora anserina S mat+]
gi|170947604|emb|CAP59765.1| unnamed protein product [Podospora anserina S mat+]
Length = 811
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 43 CWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C ++ G C N C F H P+ A + A S S + P +K I C+FY G C
Sbjct: 1 CVFFTQGRCRNGSTCSFFHDPVLAKLAWAGSTSTADR-DDKAPTSK--ITCHFYLKGACL 57
Query: 102 RGDRCSFLH 110
+GD CSF H
Sbjct: 58 KGDTCSFAH 66
>gi|262374522|ref|ZP_06067796.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205]
gi|262310518|gb|EEY91608.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205]
Length = 302
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLA--GNCINPRCGFRHPPLDAHVTEAPSESVSLPC 79
K+ + E + +A +N R CW + A N I H + ++ ++ V +P
Sbjct: 133 TKRQGEVELEQSGVAFINFRTCWVYAARGHNFIKTMLKLGHMKEELNII---NDQVGVPT 189
Query: 80 QSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSS--KSASAVTDSLLSENK 137
+++ + T+ +YF ++ S LHG +AP G+++ A+ V D + +
Sbjct: 190 GAALIADVTAQVLRYYF---LQTAEQKSQLHGHYHLAPKGETTWFDYANFVFDQASKQGQ 246
Query: 138 TSAGDGTGSPPTEIRPNPSEAPL 160
T T TE P P++ PL
Sbjct: 247 TFVLKSTNPIATEAYPTPAKRPL 269
>gi|169805996|ref|XP_001827743.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
gi|161779029|gb|EDQ31055.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
Length = 181
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKK C+Y H I + P ++ + G C N C F H D+ V E + C++
Sbjct: 70 CKKNEKCDYLHEYILKKMPECFFFNVYGVCNNNECMFLHVKPDSKVRECVWYTRGF-CRN 128
Query: 82 SIPVNKTSI---PCYFYFNGFCSRGDRCSFLHG 111
I C+ YFNGFC +G C H
Sbjct: 129 GAQCKNKHIRKNLCWDYFNGFCPKGPECKLGHA 161
>gi|221056430|ref|XP_002259353.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809424|emb|CAQ40126.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1940
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 21/103 (20%)
Query: 15 FLASPLTCKKGLDCEYRHNE------IARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVT 68
FL L C+KG +C Y H+ + + + C WL C NP C + H + T
Sbjct: 459 FLKKGL-CQKGDNCSYAHSADTLRSCMNLMKTKICQMWLKNECRNPNCVYAHGEGELRAT 517
Query: 69 EAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
KT + YF G C GDRC HG
Sbjct: 518 P--------------DYFKTKLCKYFDKEGTCPSGDRCRHAHG 546
>gi|432906538|ref|XP_004077579.1| PREDICTED: uncharacterized protein LOC101161746 [Oryzias latipes]
Length = 1072
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 21/69 (30%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y+L G CI +C F H + +P K + C FY G+CS
Sbjct: 290 CKYFLEGRCIKGEQCKFEH-------------------ELVVPDKKKEL-CKFYLQGYCS 329
Query: 102 RGDRCSFLH 110
+GD C ++H
Sbjct: 330 KGDHCIYMH 338
>gi|443922894|gb|ELU42246.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 477
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 60/170 (35%), Gaps = 50/170 (29%)
Query: 15 FLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD---------- 64
F P C++G++C Y HN + RHPPLD
Sbjct: 214 FFQFPGGCRQGINCRYAHNGT------------PDGSTDASSSGRHPPLDPNTPAGVCRY 261
Query: 65 -------------AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH- 110
H+ + P Q + P+ + F+ +G C RG C F H
Sbjct: 262 FWSRGVCNRGTSCTHMHQRPDS------QGNNPIFPRGVCRTFWTSGLCGRGASCKFEHR 315
Query: 111 -GPDGI-----APNGKSS--KSASAVTDSLLSENKTSAGDGTGSPPTEIR 152
PD APN S K+A ++L +K G G G+ P+E R
Sbjct: 316 TNPDAAPLEENAPNSLQSHFKAAGLGNFTILDTDKFCVGTGKGANPSETR 365
>gi|349805483|gb|AEQ18214.1| putative zc3h11a protein [Hymenochirus curtipes]
Length = 132
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ + DC ++ S TC KG C +RH E A N C W C C FRH +D
Sbjct: 1 MSNKGDDCYFYFYS--TCTKGDSCPFRHCEAALGNETVCTLWQDQRCFREICRFRHMEID 58
Query: 65 AHVTEAPS 72
+E P
Sbjct: 59 KKRSEIPC 66
>gi|256088194|ref|XP_002580237.1| hypothetical protein [Schistosoma mansoni]
gi|353228956|emb|CCD75127.1| hypothetical protein Smp_172780 [Schistosoma mansoni]
Length = 872
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 23/90 (25%)
Query: 40 PRDCWYWLAGNCIN-PRCGFRHPPL---------------DAHVTEAPSESVSLPCQSSI 83
P C+Y+ AG C N C F HP + + H PS ++
Sbjct: 27 PPVCYYYQAGCCRNGNECTFTHPKVRCRTFASDGWCPYGYNCHFWHDPSVKPNV------ 80
Query: 84 PVNKTSIPCYFYFNGFCSRGDRCSFLHGPD 113
VN PC FY N C GD+CSF H D
Sbjct: 81 -VNLIKKPCLFYANNQCKYGDKCSFSHDID 109
>gi|157128437|ref|XP_001655121.1| hypothetical protein AaeL_AAEL011111 [Aedes aegypti]
gi|108872610|gb|EAT36835.1| AAEL011111-PA, partial [Aedes aegypti]
Length = 966
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 23/115 (20%)
Query: 12 CVYFLASPLTCKKGLDCEYRH--------------NEIARLNPRDCWYWLAGNCINPRCG 57
C YF PL C++G CE+ H ++ L+P C Y C P C
Sbjct: 836 CKYF---PL-CRQGDSCEFLHPSTNCKAFPACKFGDKCLYLHPM-CKY--DKTCHRPDCN 888
Query: 58 FRHP-PLDAHVTEAPSESVSL-PCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ H PL AH + AP + S+ P Q+ + +P F CS GD C + H
Sbjct: 889 YMHTKPLSAHSSTAPPLASSVVPVQNYKTITAKPLPQLCRFYPGCSNGDLCPYYH 943
>gi|348537930|ref|XP_003456445.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1289
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 22/70 (31%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y++ G C C F H + LP + + C FY GFC+
Sbjct: 360 CKYYIEGRCTWGDHCNFSH-------------DIELPKKKEL--------CKFYITGFCA 398
Query: 102 RGDRCSFLHG 111
R D C ++HG
Sbjct: 399 RADHCPYMHG 408
>gi|226480092|emb|CAX73342.1| Cleavage and polyadenylation specificity factor subunit 4
[Schistosoma japonicum]
Length = 307
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV 67
R C ++L CKKG DCE+ H P ++ G C+N C F H + V
Sbjct: 64 RTVVCKHWLRG--LCKKGDDCEFLHEYDMTKMPECYFFSKFGECMNKECPFLHIDPASKV 121
Query: 68 TEAPSESVSLPCQSSIPVNK--TSIPCYFYFNGFCSRGDRCSFLH 110
+ P + N+ + C Y NGFC +G C + H
Sbjct: 122 QDCPWYDRGFCRNGPLCRNRHVRRVACKNYVNGFCPKGRECKYAH 166
>gi|410910570|ref|XP_003968763.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Takifugu rubripes]
Length = 1378
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 22/70 (31%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y++ G C C F H V LP + + C FY GFC+
Sbjct: 385 CKYYIEGRCTWGDHCNFSH-------------DVDLPKKKEL--------CKFYITGFCA 423
Query: 102 RGDRCSFLHG 111
R D C ++HG
Sbjct: 424 RADHCPYMHG 433
>gi|156098889|ref|XP_001615460.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804334|gb|EDL45733.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2172
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 21/103 (20%)
Query: 15 FLASPLTCKKGLDCEYRHNE------IARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVT 68
FL L C+KG +C Y H+ + + + C WL C NP C + H + T
Sbjct: 508 FLKKGL-CQKGDNCSYAHSADTLRSCMNLMKTKICQLWLKNECRNPNCVYAHGEGELRAT 566
Query: 69 EAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
KT + YF G C GD+C HG
Sbjct: 567 --------------PDYFKTKLCKYFDKEGTCPSGDKCRHAHG 595
>gi|405969089|gb|EKC34098.1| Zinc finger CCCH domain-containing protein 10 [Crassostrea gigas]
Length = 403
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 21/122 (17%)
Query: 12 CVYFLASPLTCKKGLDCEYRH------NEIARLNPRDCWYWLAGNCINPRCGFRH----- 60
C FL + CK+G C+YRH ++ R N C + C C F H
Sbjct: 25 CRDFLRN--VCKRGKRCKYRHPNTDEARDLGRQNITFCHDFQNTGCRRGNCKFLHCTREE 82
Query: 61 -------PPLDAHVTEAPSESVSLPCQSSIPVNKTSIP-CYFYFNGFCSRGDRCSFLHGP 112
L + +A + + + +P+ + IP C Y G C RG +C F H
Sbjct: 83 EEHYKQTGQLPVRLQQAAALGLGVTPNVDVPLLRGEIPICKDYLKGNCKRGAKCKFRHIT 142
Query: 113 DG 114
G
Sbjct: 143 QG 144
>gi|281341466|gb|EFB17050.1| hypothetical protein PANDA_006652 [Ailuropoda melanoleuca]
Length = 799
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 20/87 (22%)
Query: 24 KGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSI 83
+G C +RH E A N C W G C C FRH +D +E
Sbjct: 1 QGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE-------------- 46
Query: 84 PVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 47 ------IPCYWENQPMGCQKLNCAFHH 67
>gi|443731162|gb|ELU16399.1| hypothetical protein CAPTEDRAFT_227798 [Capitella teleta]
Length = 788
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 36/153 (23%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S C KG C +RH A + C W G C C +RH +D
Sbjct: 7 DCYFFYYS--NCAKGDQCPFRHQAAALGSEEVCDLWREGRCFRTVCVYRH--MD------ 56
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPN---GKSSKSASA 127
I N+++ CY+ C F+H + P G S+ +AS
Sbjct: 57 ------------IKTNRSNTACYWETQPSGCTKAHCPFMH----VNPRPHWGSSTLNAS- 99
Query: 128 VTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPL 160
++ D PP+ + P+P+ A L
Sbjct: 100 ------NDLPQPFWDPNQPPPSMVEPSPALAQL 126
>gi|326432264|gb|EGD77834.1| hypothetical protein PTSG_08925 [Salpingoeca sp. ATCC 50818]
Length = 847
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 71 PSESVSLPCQSSIPV----NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSAS 126
PS++++ P S ++ I C F+ GFC RGDRC F HG DG+ NG A
Sbjct: 379 PSDTIAFPQASESSAGDEESEDRIHCPFFMAGFCPRGDRCPFYHG-DGL--NGDEVSVAL 435
Query: 127 AVTDSLLSEN 136
A + +E+
Sbjct: 436 AAVSMIENED 445
>gi|390356014|ref|XP_003728683.1| PREDICTED: uncharacterized protein LOC100892284 [Strongylocentrotus
purpuratus]
Length = 1384
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 31/103 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNC-INPRCGFRHPPLDAHVTEA 70
C ++L CKKG +C Y H+ + C ++++G C C + H
Sbjct: 330 CKFYLEG--RCKKGENCTYSHDLTQQRKQELCKFYVSGFCNKGDTCLYMH---------- 377
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLHGP 112
PC +Y +G C +GD+C F HGP
Sbjct: 378 -----------------GEFPCKYYHSGSECFQGDKCRFSHGP 403
>gi|402466402|gb|EJW01901.1| hypothetical protein EDEG_00331 [Edhazardia aedis USNM 41457]
Length = 957
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 22/101 (21%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC YFL S TC K ++C+YRH+ A+ NP C W C FRH H+ +
Sbjct: 3 DCYYFLYS--TCSK-INCQYRHSIKAKENPILCSNWKHKQICVSSCPFRHSTY--HLNKK 57
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
E + CY+ G C++ + C F H
Sbjct: 58 RHEEM----------------CYWEAKGKCTK-EFCEFKHN 81
>gi|410931245|ref|XP_003979006.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Takifugu rubripes]
Length = 263
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 24/181 (13%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS------------SKSAS 126
+ + C Y GFC G C F+H P P G S SKSAS
Sbjct: 135 GPDCRHRHTRRVICVNYLVGFCPEGRSCKFMH-PRFELPMGASEQPPLPLQSQNQSKSAS 193
Query: 127 AVTDSLLS----ENKTSAGDGTGSPPTE---IRPNPSEAPLKLAVDVRVQPKGHLLQSAP 179
A+ S +S N + + T PT+ + N PL + +GH
Sbjct: 194 AMGRSSMSLIQLTNSSPGINNTQMMPTQQNNMSTNRGPRPLDQVTCFKCGDRGHYANKCT 253
Query: 180 K 180
K
Sbjct: 254 K 254
>gi|443697259|gb|ELT97794.1| hypothetical protein CAPTEDRAFT_180092 [Capitella teleta]
Length = 274
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 66/192 (34%), Gaps = 22/192 (11%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHV 67
R C ++L CKKG DCE+ H P ++ G C N C F H + +
Sbjct: 64 RTVVCKHWLRG--LCKKGDDCEFLHEYDMSKMPECYFFSKFGQCGNKECPFLHIDPEQKM 121
Query: 68 TEAPSESVSLPCQSSIPVNK--TSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSA 125
+ N+ + C Y GFC G +C ++H P P ++ A
Sbjct: 122 KDCAWYDRGFCRHGPNCKNRHVRRVMCINYMCGFCLDGPKCKYVH-PQFDIPQSDPAQQA 180
Query: 126 SAVTDSL----------LSENKTSAGDGTGSPPTEIRPNPSE-------APLKLAVDVRV 168
+T + + K G PP + P E PL+ V +
Sbjct: 181 KRLTITCHKCGEQGHKAMQCKKNEGNVGQAVPPHNVHHQPPEHNFNRPRRPLEEVVCYKC 240
Query: 169 QPKGHLLQSAPK 180
KGH PK
Sbjct: 241 GGKGHYANRCPK 252
>gi|432870755|ref|XP_004071832.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Oryzias latipes]
Length = 265
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKT 138
+ + C Y GFC G C F+H P P G S + + + ++ KT
Sbjct: 135 GPDCRHRHTRRVICVNYLVGFCPEGKSCKFMH-PRFELPMGTSEQ--PPLPQQIQNQGKT 191
Query: 139 SAGDGTGS 146
+A G S
Sbjct: 192 AASSGRSS 199
>gi|332267258|ref|XP_003282601.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like,
partial [Nomascus leucogenys]
Length = 98
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A C W C++P C FRH +
Sbjct: 7 DCYFFFNS--TCIKGSQCRFRHCEEALGGDTVCSLWRERKCLDPLCRFRHMEMQ------ 58
Query: 71 PSESVSLPC-QSSIPVNKTSIPCYFY 95
++ S+ C + P+ I C FY
Sbjct: 59 --QNCSISCFWETQPLGCVKISCIFY 82
>gi|440300652|gb|ELP93099.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba invadens
IP1]
Length = 160
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 41/113 (36%), Gaps = 31/113 (27%)
Query: 21 TCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
+CK G +C Y H P + G C P C FRH EAPS S
Sbjct: 48 SCKLGNNCGYLHEYDLDKTPMCNHFEKYGKCDKPECPFRH--------EAPSNSPK---- 95
Query: 81 SSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPD--------GIAPNGKSSKSA 125
C +Y GFCSRG +C LH G P GK K +
Sbjct: 96 -----------CEWYIRGFCSRGKKCHNLHPKKLLCPLYFMGFCPYGKQCKYS 137
>gi|403285965|ref|XP_003934279.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 216
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 48 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 107
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 108 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRTP 166
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 167 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 207
>gi|402581743|gb|EJW75690.1| zinc finger protein, partial [Wuchereria bancrofti]
Length = 265
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 39/172 (22%)
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGT 144
V+ S+ C FY G C +G++C F H ++ K++K V LS+ + D
Sbjct: 36 VDPKSVVCLFYKQGMCHKGEKCKFSH---DLSKEQKTAKKNLYVDSRDLSKEDDNIDDWD 92
Query: 145 GSPPTEI-----------RPNPSEAPLKLAVDV---------------------RVQPKG 172
S +E+ RPN ++ K ++ P G
Sbjct: 93 ESKLSEVAEKKHGERDRKRPNQTDIVCKYFLEAVENSKYGWFWECPNGDGCIYRHALPSG 152
Query: 173 HLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDW 224
++L+ K++ E + +ISL E + K + + E K + W
Sbjct: 153 YILKKDRKKLEEHKQLNEISLEE----LLEKERTQLKPESLTKVTLDTFIRW 200
>gi|449016115|dbj|BAM79517.1| similar to cleavage and polyadenylation specific factor 4, 30kD
subunit [Cyanidioschyzon merolae strain 10D]
Length = 188
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG++CE+ H P ++ G C N C +RH D+ E P + C+
Sbjct: 73 CKKGIECEFVHRFELDKMPECFFFSRYGECTNDECMYRHVVADSRRMECPFYARGF-CKH 131
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLHG 111
+ + C Y GFC +G C F H
Sbjct: 132 GPRCRYKHVQKVACANYLGGFCPKGPACRFGHA 164
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRTP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|148707695|gb|EDL39642.1| mCG131554, isoform CRA_b [Mus musculus]
Length = 885
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 20/86 (23%)
Query: 25 GLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIP 84
G C +RH E A N C W G C C FRH +D +E
Sbjct: 112 GDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSE--------------- 156
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 157 -----IPCYWENQPVGCQKLNCAFHH 177
>gi|254564527|ref|XP_002489374.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029170|emb|CAY67090.1| Hypothetical protein PAS_chr1-3_0039 [Komagataella pastoris GS115]
gi|328349804|emb|CCA36204.1| Zinc finger CCCH domain-containing protein 3 [Komagataella pastoris
CBS 7435]
Length = 356
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 40/125 (32%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C+YF+ + C + C Y H+ + C +L G C N C H P + +P
Sbjct: 139 CIYFVTTG-NCARKSSCRYLHDANMK---SLCKEFLKGTCYNAYCTLSHKPTQFN---SP 191
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPD-------------GIAPN 118
S C FY GFCS + CS+ H D GI P+
Sbjct: 192 S-------------------CKFYNTGFCS-NENCSYTHKKDSSEAAVCRPFAVNGICPD 231
Query: 119 GKSSK 123
G + K
Sbjct: 232 GMTCK 236
>gi|426357078|ref|XP_004045875.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Gorilla gorilla gorilla]
gi|221043738|dbj|BAH13546.1| unnamed protein product [Homo sapiens]
Length = 191
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 23 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 82
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 83 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRTP 141
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 142 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 182
>gi|260949117|ref|XP_002618855.1| hypothetical protein CLUG_00014 [Clavispora lusitaniae ATCC 42720]
gi|238846427|gb|EEQ35891.1| hypothetical protein CLUG_00014 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 15/68 (22%)
Query: 43 CWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSR 102
C Y+LAGNC NP C F H P + + S + P F G+C R
Sbjct: 255 CSYFLAGNCKNPACSFSHNPPPHSMDDKYSIWLCRP---------------FSKGGWCIR 299
Query: 103 GDRCSFLH 110
G +C FLH
Sbjct: 300 GKKCPFLH 307
>gi|452979501|gb|EME79263.1| hypothetical protein MYCFIDRAFT_190235 [Pseudocercospora fijiensis
CIRAD86]
Length = 734
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPP 62
QK +T C Y+LAS + DC + H + C YWLAGNCI C F H P
Sbjct: 284 QKSSTVCRYWLASGYCARA--DCRFAHEVQNHI----CKYWLAGNCIAGENCLFSHDP 335
>gi|332867116|ref|XP_001137528.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 4 [Pan troglodytes]
gi|397489496|ref|XP_003815762.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Pan paniscus]
Length = 191
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 23 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 82
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 83 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRTP 141
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 142 QVIGVMQSQNSSVGNRGPRPLEQVTCYKCGEKGHYANRCTK 182
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRTP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSVGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|37589754|gb|AAH59648.1| Zgc:73328 protein [Danio rerio]
Length = 246
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTE 69
DC +F S TC KG C +RH E A + C W C C FRH +D + E
Sbjct: 7 DCYFFYYS--TCTKGDSCPFRHCEAAMGSETVCNLWQEQRCFRNVCKFRHMEIDKNRKE 63
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +T
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPQAKQRTP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNNNVGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|339240251|ref|XP_003376051.1| conserved hypothetical protein [Trichinella spiralis]
gi|316975255|gb|EFV58704.1| conserved hypothetical protein [Trichinella spiralis]
Length = 338
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
DC +F S C KG C +RH++ A C WL G C CG+RH
Sbjct: 7 DCYFFFYS--KCTKGDRCPFRHSKSALGTEIVCQAWLQGRCRKAGCGYRH 54
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + S+ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPSKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G + N PL+ + KGH K
Sbjct: 195 QVIGVMQSQSSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|170578058|ref|XP_001894248.1| AT31705p [Brugia malayi]
gi|158599238|gb|EDP36911.1| AT31705p, putative [Brugia malayi]
Length = 389
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 39/172 (22%)
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGT 144
V+ S+ C FY G C +G++C F H ++ K++K V LS+ + D
Sbjct: 88 VDPKSVVCLFYKQGMCHKGEKCKFSH---DLSKEQKTAKKNLYVDSRDLSKEDDNIDDWD 144
Query: 145 GSPPTEI-----------RPNPSEAPLKLAVDV---------------------RVQPKG 172
S +E+ RPN ++ K ++ P G
Sbjct: 145 ESKLSEVAEKKHGERDRKRPNQTDIVCKYFLEAVENNKYGWFWECPNGDGCIYRHALPSG 204
Query: 173 HLLQSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHLYTDW 224
++L+ K++ E + +ISL E + K + + E K + W
Sbjct: 205 YILKKDRKKLEEHKQLNEISLEE----LLEKERTQLKPENLTKVTLDTFIRW 252
>gi|410981626|ref|XP_003997168.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Felis catus]
Length = 166
Score = 41.6 bits (96), Expect = 1.1, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG C + H P +Y G+C N C F H + P C+
Sbjct: 76 CKKGDQCNFLHQYDVTRMPECYFYSKFGDCNNKECPFLHVKPAFKTRDCPWYDQGF-CKD 134
Query: 82 SIPVNK----TSIPCYFYFNGFCSRGDRCSF 108
P+ K I C YF GFC G RC F
Sbjct: 135 G-PLCKHRHVRKIMCANYFVGFCPEGPRCQF 164
>gi|150864463|ref|XP_001383287.2| hypothetical protein PICST_43550 [Scheffersomyces stipitis CBS
6054]
gi|149385719|gb|ABN65258.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 238
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 48/142 (33%), Gaps = 52/142 (36%)
Query: 22 CKKGLDCEYRHN------------------------EIARLNPRDCWYWLAGNCINPRCG 57
C KG C+Y HN +I N C Y++ G C N C
Sbjct: 2 CMKGSKCKYIHNRSRIRVCQQNLVGKCTNHNCLFCHDINEFNTPVCRYYIEGKCTNSACK 61
Query: 58 FRH--PPLDAHVTEAPSES-VSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH---- 110
F H PP H E E V P F G+CSRG +C F+H
Sbjct: 62 FMHHKPP---HYGELGYEVWVCRP---------------FAVGGWCSRGQQCPFIHLFNC 103
Query: 111 ---GPDGIAPNGKSSKSASAVT 129
DG P GKS A T
Sbjct: 104 PDFEEDGNCPRGKSCYLAHPTT 125
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 17/163 (10%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 100 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 159
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS-------------SKSAS 126
+ ++ + + C Y GFC G C F+H P P G + + A
Sbjct: 160 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPTKQRAP 218
Query: 127 AVTDSLLSENKTSAGDGTGSPPTEIRP-NPSEAPLKLAVDVRV 168
V + S+N ++A + T +P P+E LA D R
Sbjct: 219 QVIGVMQSQNSSAAAAAAAAGITVEQPEGPAEGSTHLAADCRT 261
>gi|405971141|gb|EKC35995.1| Zinc finger CCCH domain-containing protein 3 [Crassostrea gigas]
Length = 728
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 22 CKKGLDCEYRHN--EIARLNPRDCWYWLAGNCINPRCGFRHP------PLDAHVTEAPSE 73
C +G C+YRH+ ++A C +L G C C F H P+ ++
Sbjct: 143 CNRGDKCKYRHDPEKVA-----VCTRFLRGTCSIVDCPFSHKVDKEKMPVCSYFLRGVCS 197
Query: 74 SVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH-------GPDGIAPNGKSSK 123
+ P + VNK + C + GFCS+G +C+ H G P+G K
Sbjct: 198 RENCP-YLHVKVNKNAEVCQDFLQGFCSKGAKCTKSHTLVCQMFAATGSCPDGAKCK 253
>gi|326434883|gb|EGD80453.1| hypothetical protein PTSG_11097 [Salpingoeca sp. ATCC 50818]
Length = 273
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 6 QKRNTD-CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPL 63
Q+R T+ C YFLA+ TC+KG C Y H+ L C Y+ C C F H PL
Sbjct: 18 QERKTEVCKYFLAN--TCRKGDACLYSHD----LKQLPCRYFFTVGCTVDACRFSHDPL 70
>gi|66815629|ref|XP_641831.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
gi|60469873|gb|EAL67859.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
Length = 611
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C G DC Y H E R+ R C ++AGNC +P C +H LD + ++ C +
Sbjct: 374 CNNGNDCRYEH-EPKRV--RICPKFIAGNCDDPDCKLQH-SLDLDLMPICHLFLNRMCTN 429
Query: 82 S------IPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ ++K + C + +G+C +G +C H
Sbjct: 430 DNCPYLHVNLSKDTEVCPDFISGYCPKGSKCELKH 464
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM
1558]
Length = 346
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNC-INPRCGFRHPP 62
E +K+ T C ++L + CK G +CEY H+ R P W+ +AG C + C + H P
Sbjct: 94 EREKKMTVCKHYLRN--LCKMGDNCEYTHDFNLRTMPVCVWFVMAGKCELGGECLYYH-P 150
Query: 63 LDAHVTEAPSESVSLPCQSSIPVNKTSI---PCYFYFNGFCSRGDRCSFLH 110
D V E P + C+ + I C Y GFC G C H
Sbjct: 151 RDRRV-ECPDYNRGF-CRLGPECPRRHIRRQICGAYMAGFCPDGPNCKLAH 199
>gi|268579093|ref|XP_002644529.1| Hypothetical protein CBG14442 [Caenorhabditis briggsae]
Length = 406
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNC-INPRCGFRHPPLD 64
Q R+ DC YF TC KG C +RH E R N C + LAG C C F+H L
Sbjct: 5 QARSEDCRYFANG--TCSKGNACTFRHEETTRRN-NICQFHLAGKCTFGEVCRFKHVELS 61
Query: 65 AH 66
H
Sbjct: 62 QH 63
>gi|222624858|gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASA 127
PC +Y GFC G C F+HG D A G + +A+A
Sbjct: 238 PCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATA 274
>gi|224066791|ref|XP_002302217.1| predicted protein [Populus trichocarpa]
gi|222843943|gb|EEE81490.1| predicted protein [Populus trichocarpa]
Length = 2120
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 23/84 (27%)
Query: 27 DCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVN 86
DC+ H I P DC Y+L G C N C +RH + VN
Sbjct: 1932 DCKLTHKVIPERMP-DCSYFLQGLCTNKNCPYRH----------------------VHVN 1968
Query: 87 KTSIPCYFYFNGFCSRGDRCSFLH 110
+ C + G+C+ G+ C H
Sbjct: 1969 PNASTCEGFLRGYCADGNECPKKH 1992
>gi|218192752|gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASA 127
PC +Y GFC G C F+HG D A G + +A+A
Sbjct: 238 PCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATA 274
>gi|115452803|ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|215734917|dbj|BAG95639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASA 127
PC +Y GFC G C F+HG D A G + +A+A
Sbjct: 238 PCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATA 274
>gi|205688046|sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22
gi|108707943|gb|ABF95738.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASA 127
PC +Y GFC G C F+HG D A G + +A+A
Sbjct: 238 PCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATA 274
>gi|326674230|ref|XP_686060.4| PREDICTED: hypothetical protein LOC557823 [Danio rerio]
Length = 1323
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 22/70 (31%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y++ G C C F H + LP + + C FY GFC+
Sbjct: 364 CKYYIEGRCTWGDHCNFSH-------------DIELPKKKEL--------CKFYITGFCA 402
Query: 102 RGDRCSFLHG 111
R + C ++HG
Sbjct: 403 RAENCPYMHG 412
>gi|334182742|ref|NP_173577.2| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
gi|332191999|gb|AEE30120.1| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
Length = 2166
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 26/99 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C FL C +C+ H I P DC Y+L G C N C +RH
Sbjct: 1970 CTKFLNG--LCANA-NCKLTHKVIPERMP-DCSYYLQGLCNNEACPYRH----------- 2014
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ VN + C + G+CS GD C H
Sbjct: 2015 -----------VHVNPIAPICDGFLKGYCSEGDECRKKH 2042
>gi|398398355|ref|XP_003852635.1| hypothetical protein MYCGRDRAFT_58978, partial [Zymoseptoria
tritici IPO323]
gi|339472516|gb|EGP87611.1| hypothetical protein MYCGRDRAFT_58978 [Zymoseptoria tritici IPO323]
Length = 717
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPP 62
QK T C Y+LAS C + DC + H L C YWLAGNCI C F H P
Sbjct: 287 QKSATVCRYWLAS-GHCARA-DCRFAHEVQNHL----CKYWLAGNCIAGSSCLFSHDP 338
>gi|380476569|emb|CCF44644.1| hypothetical protein CH063_13974 [Colletotrichum higginsianum]
Length = 431
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 22/89 (24%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C G C+ H+ + P C +++ GNC NP C + AH + +P +L C+S
Sbjct: 284 CANGESCDLSHDLTPQRTP-TCVHFIKGNCANPNCPY------AHSSVSPG---ALVCRS 333
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
F G+C +GD+C H
Sbjct: 334 ------------FGMYGYCDKGDKCEERH 350
>gi|145507242|ref|XP_001439576.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406771|emb|CAK72179.1| unnamed protein product [Paramecium tetraurelia]
Length = 221
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 36 ARLNPRDCWYWLAG-NC-INPRCGFRH---------PPLDAHVTEAPSESVSLPCQSSIP 84
A+ C ++LA C I +C F H PL A A + + P
Sbjct: 18 AKYKTMLCRHYLATKQCAIGAKCQFAHGTSEQRQMNDPLPASALSAMTSGIEQPISKPQS 77
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPD 113
N S+PC ++ +C G C ++H PD
Sbjct: 78 SNLNSVPCKYHAQNYCKNGSNCQYMHDPD 106
>gi|449300708|gb|EMC96720.1| hypothetical protein BAUCODRAFT_24435 [Baudoinia compniacensis UAMH
10762]
Length = 1193
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 43 CWYWLAGNCINP--RCGFRHPPLDA--HVTE-APSESVSLPCQSSI------------PV 85
CW+WL G+C P +C F H P+D H+++ P+E P + P
Sbjct: 460 CWHWLNGDCRAPAGQCSFAHEPIDPKDHMSKFLPNEQQHSPPPPDLASQQLGLGAPQGPR 519
Query: 86 NKTS-IPCYFYFNGFCS-RGDRCSFLHGPDGIAPNGKSSKSA 125
TS + C+F+ G C + C+F H G+ ++ K++
Sbjct: 520 PPTSEVTCFFWLRGKCRFSAEECNFAHRDTGVYATNEAVKAS 561
>gi|328874246|gb|EGG22612.1| hypothetical protein DFA_04742 [Dictyostelium fasciculatum]
Length = 542
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 25/94 (26%)
Query: 28 CEYRHNEIARLNPRD---CWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIP 84
C +H E++ L+P C+ +L G C+N C + H +
Sbjct: 403 CTLQHKEVSELDPEQMPVCYQFLRGMCMNDNCPYLH----------------------VH 440
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPN 118
V++ + C + GFCS+G C H PN
Sbjct: 441 VSRDAQVCPDFLKGFCSKGSSCQMKHTYSYAKPN 474
>gi|147784383|emb|CAN77305.1| hypothetical protein VITISV_030063 [Vitis vinifera]
Length = 359
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 87 KTSIPCYFYFNGFCSRGDRCSFLHGPD 113
K +P F+ G C +GDRC+FLHGP+
Sbjct: 24 KQLVPYIFFQKGLCLKGDRCAFLHGPN 50
>gi|326500250|dbj|BAK06214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1031
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 36/106 (33%)
Query: 10 TDCVYFLASPLTCKKGL----DCEYRHNEIA-RLNPRDCWYWLAGNCINPRCGFRHPPLD 64
T C FL KGL C+ H + R+ +DC Y+L G C N C +RH
Sbjct: 797 TICTKFL-------KGLCSDTSCKLTHKVLPERM--QDCSYFLKGLCTNTACPYRH---- 843
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ VN + C + G+C+ GD C H
Sbjct: 844 ------------------VKVNSNAPACEDFLKGYCADGDECRKKH 871
>gi|47117559|sp|Q8BYK8.2|ZC3H6_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 6
Length = 1177
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 276 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 323
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
+ PC FY +G C +GD+C F H
Sbjct: 324 -----------------SEFPCKFYHSGAKCYQGDKCKFSH 347
>gi|156717216|ref|NP_848491.2| zinc finger CCCH domain-containing protein 6 [Mus musculus]
gi|148696278|gb|EDL28225.1| zinc finger CCCH type containing 6 [Mus musculus]
Length = 1177
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 276 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 323
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
+ PC FY +G C +GD+C F H
Sbjct: 324 -----------------SEFPCKFYHSGAKCYQGDKCKFSH 347
>gi|402465457|gb|EJW01267.1| hypothetical protein EDEG_00528 [Edhazardia aedis USNM 41457]
Length = 176
Score = 40.8 bits (94), Expect = 1.7, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
CKKG +CE+ H + P +CW++ G C N C F H +D + + + C+
Sbjct: 61 CKKGRECEFLHEYDLKRMP-ECWFFSKYGECANNECYFLH--VDPNKAKECAWYKRGFCR 117
Query: 81 SSIPVNKTSIP---CYFYFNGFCSRGDRCSFLHG 111
+ + C YF GFC G C + H
Sbjct: 118 NGNYCRNKHVKGKMCAHYFYGFCKDGPDCVYNHA 151
>gi|68485589|ref|XP_713277.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|68485696|ref|XP_713226.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|46434707|gb|EAK94109.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|46434759|gb|EAK94160.1| potential zinc RING finger protein [Candida albicans SC5314]
Length = 234
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 39/113 (34%)
Query: 22 CKKGLDCEYRHN-EIARLNPR-----------------------DCWYWLAGNCINPRCG 57
C KG++C+Y H+ E R+ P C Y+L +C NP C
Sbjct: 2 CDKGINCKYDHDKEKIRICPLYLLGKCYSKNCLLSHSPNDNNTPQCRYFLDKSCQNPNCK 61
Query: 58 FRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+RH AH + E + C+ F GFCSRG +CSFLH
Sbjct: 62 YRHFK-PAHYNDPNYEIWT--CRP------------FAIGGFCSRGKKCSFLH 99
>gi|157821021|ref|NP_001101242.1| zinc finger CCCH domain-containing protein 6 [Rattus norvegicus]
gi|149023250|gb|EDL80144.1| zinc finger CCCH type containing 6 (predicted) [Rattus norvegicus]
Length = 1180
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 275 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 322
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
+ PC FY +G C +GD+C F H
Sbjct: 323 -----------------SEFPCKFYHSGAKCYQGDKCKFSH 346
>gi|424513562|emb|CCO66184.1| predicted protein [Bathycoccus prasinos]
Length = 841
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 27/113 (23%)
Query: 40 PRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNG 98
PR C+ + G C RC + H P S+P PC+ + G
Sbjct: 564 PRPCYAYAKGECFRGDRCKYWHDP-------------SIPAPDRSKQIGEGGPCWAFAQG 610
Query: 99 FCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEI 151
C RGD C F H P S + L + +AG G PPT+
Sbjct: 611 RCFRGDSCRFSHDP-------------SILPKDLENNPFRNAGVQDGPPPTQF 650
>gi|347829984|emb|CCD45681.1| similar to transcription factor Zn, C2H2 [Botryotinia fuckeliana]
Length = 914
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 25/112 (22%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLN-PRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
C YF+ S C +G C+Y H+ N P + GN + PL
Sbjct: 5 CKYFITST-GCGRGNTCQYSHDTTITTNTPDPILLLMFGN--------ENQPLG------ 49
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSS 122
Q+ P+ I C F G C +G+ C F HG + AP+ KSS
Sbjct: 50 ---------QNLRPIATKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSS 92
>gi|9454580|gb|AAF87903.1|AC015447_13 Hypothetical protein [Arabidopsis thaliana]
Length = 2123
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 26/99 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C FL C +C+ H I P DC Y+L G C N C +RH
Sbjct: 1927 CTKFLNG--LCANA-NCKLTHKVIPERMP-DCSYYLQGLCNNEACPYRH----------- 1971
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ VN + C + G+CS GD C H
Sbjct: 1972 -----------VHVNPIAPICDGFLKGYCSEGDECRKKH 1999
>gi|154323822|ref|XP_001561225.1| hypothetical protein BC1G_00310 [Botryotinia fuckeliana B05.10]
Length = 913
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 25/112 (22%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLN-PRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
C YF+ S C +G C+Y H+ N P + GN + PL
Sbjct: 4 CKYFITST-GCGRGNTCQYSHDTTITTNTPDPILLLMFGN--------ENQPLG------ 48
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSS 122
Q+ P+ I C F G C +G+ C F HG + AP+ KSS
Sbjct: 49 ---------QNLRPIATKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSS 91
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS------------SKSASA 127
+ ++ + + C Y GFC G C F+H P P G + SK A
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPSKRAPQ 194
Query: 128 VTDSLLSENKTSAGDG 143
V + S+N ++ G
Sbjct: 195 VIGVMQSQNSSAGNRG 210
>gi|413954696|gb|AFW87345.1| hypothetical protein ZEAMMB73_473743 [Zea mays]
Length = 1192
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 32/112 (28%)
Query: 4 ELQKRNTDCVYF--LASPLTCKKGL-------DCEYRHNEIARLNPRDCWYWLAGNCINP 54
E +K C Y A + C K L C+ H + P DC Y+L G C N
Sbjct: 968 ECKKSGGKCPYIHDRAKVVICTKFLKGLCSSTSCKLTHKVLPERMP-DCSYFLQGLCTNT 1026
Query: 55 RCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRC 106
C +RH + VN + C + G+C+ GD C
Sbjct: 1027 ACPYRH----------------------VKVNSNAPVCEDFLKGYCADGDEC 1056
>gi|297850590|ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
gi|297339018|gb|EFH69435.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
Length = 2132
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 26/99 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C FL C +C+ H I P DC Y+L G C N C +RH
Sbjct: 1936 CTKFLNG--LCANA-NCKLTHKVIPERMP-DCSYYLQGLCNNEACPYRH----------- 1980
Query: 72 SESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+ VN ++ C + G+CS GD C H
Sbjct: 1981 -----------VHVNPSAPICDGFLKGYCSDGDECRKKH 2008
>gi|389583886|dbj|GAB66620.1| hypothetical protein PCYB_094050 [Plasmodium cynomolgi strain B]
Length = 2252
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 21/103 (20%)
Query: 15 FLASPLTCKKGLDCEYRHNE------IARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVT 68
FL L C+KG +C Y H+ + + + C WL C NP C + H + T
Sbjct: 533 FLKKGL-CQKGDNCSYAHSTDTLRSCMNLMKTKICQLWLKNECRNPNCVYAHGEGELRAT 591
Query: 69 EAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG 111
KT + YF G C G++C HG
Sbjct: 592 --------------PDYFKTKLCKYFDKEGTCPSGEKCRHAHG 620
>gi|395331885|gb|EJF64265.1| hypothetical protein DICSQDRAFT_53924 [Dichomitus squalens LYAD-421
SS1]
Length = 887
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 69/190 (36%), Gaps = 40/190 (21%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNP-------RD---------CWYWLAGNC-INP 54
C+Y+ +C +G+ C++ H + P RD C ++ G C
Sbjct: 13 CLYYRQG--SCTRGVHCKFSHGIASPNGPPQSSQTVRDRGKPLVTTVCGFYRQGTCRFGD 70
Query: 55 RCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIP------------CYFYFNGFCSR 102
C F HP + +++++ P ++ P T + C FY G C++
Sbjct: 71 SCLFSHPSSSSGHLSNGTDTLAAP--ATRPTANTIVSYRALSESTTFGSCKFYARGACNK 128
Query: 103 GDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKL 162
G C F H I P G+S S+ + + +G+ S T PS K
Sbjct: 129 GTACPFSHPATAIVPKGESDLSS-------MQASAFGSGEAAKSDSTSHDEQPSVDRTKF 181
Query: 163 AVDVRVQPKG 172
+ P G
Sbjct: 182 GCKIVYGPGG 191
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 3/154 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDARFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGH 173
G N PL+ + KGH
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGH 228
>gi|299470761|emb|CBN79807.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 389
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 27/89 (30%)
Query: 25 GLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIP 84
G+ C +RHNE +R R C W A ++
Sbjct: 30 GVHCGFRHNEASRHTERLCNRWAAAAAA---------------------------AAAAA 62
Query: 85 VNKTSIPCYFYFNGFCSRGDRCSFLHGPD 113
+ + PC FY G C++G C F H P
Sbjct: 63 IKARAPPCRFYARGLCTKGKACPFFHAPS 91
>gi|453085696|gb|EMF13739.1| hypothetical protein SEPMUDRAFT_148938 [Mycosphaerella populorum
SO2202]
Length = 764
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 6 QKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPP 62
QK T C Y+LAS C + DC + H L C YWLAGNCI C F H P
Sbjct: 285 QKSPTVCRYWLASG-HCARA-DCRFAHEVQNHL----CKYWLAGNCIAGNSCLFSHDP 336
>gi|256087464|ref|XP_002579889.1| rrm/rnp domain [Schistosoma mansoni]
gi|353229924|emb|CCD76095.1| putative rrm/rnp domain [Schistosoma mansoni]
Length = 1158
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 94 FYFNGFCSRGDRCSFLHGPDG-IAPNGKSSKSASA-VTDSLLSENKTSAGDGTGSPPTEI 151
F GFC GDRC + HGP+ + + KS+ SA A +T+ LL N S+ TG P I
Sbjct: 288 FEERGFCVYGDRCQYDHGPNALVISSAKSAVSAIAHLTNPLLDTNTLSS--NTGDLPMNI 345
>gi|26333093|dbj|BAC30264.1| unnamed protein product [Mus musculus]
Length = 810
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 276 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 323
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
+ PC FY +G C +GD+C F H
Sbjct: 324 -----------------SEFPCKFYHSGAKCYQGDKCKFSH 347
>gi|432891076|ref|XP_004075536.1| PREDICTED: uncharacterized protein LOC101162773 [Oryzias latipes]
Length = 879
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 22/70 (31%)
Query: 43 CWYWLAGNCI-NPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C Y++ G C C F H V LP + + C FY GFC+
Sbjct: 376 CKYYIEGRCTWGDHCNFSH-------------DVELPKKKEL--------CKFYITGFCA 414
Query: 102 RGDRCSFLHG 111
R D C ++HG
Sbjct: 415 RADHCPYMHG 424
>gi|27696591|gb|AAH43311.1| Zinc finger CCCH type containing 6 [Mus musculus]
Length = 936
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 35 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 82
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
+ PC FY +G C +GD+C F H
Sbjct: 83 -----------------SEFPCKFYHSGAKCYQGDKCKFSH 106
>gi|392346719|ref|XP_003749617.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Rattus
norvegicus]
Length = 1256
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C Y+L G C C + H
Sbjct: 351 CKYFLEG--RCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH---------- 398
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLH 110
PC FY +G C +GD+C F H
Sbjct: 399 -----------------NEFPCKFYHSGAKCYQGDKCKFSH 422
>gi|295913146|gb|ADG57833.1| transcription factor [Lycoris longituba]
Length = 148
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Query: 10 TDCVYFLASPLTCKKGLDCEYRHNEIARLNP----------RDCWYWLAGNCINPRCGFR 59
TDC ++L + +CK G C Y H E +NP L +NP
Sbjct: 26 TDCPFYLKTG-SCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTSLPAGLVNPAANLI 84
Query: 60 HPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYF-NGFCSRGDRCSFLHGPDGIAPN 118
P LD + +A S+ + C + P C FY G C+ G+RC F H D AP
Sbjct: 85 -PSLDPLLAQA---SLGV-CPTMYPQRPGQPECDFYMKTGRCNFGERCKFHHPVDRSAPK 139
Query: 119 GKSSKS 124
+++
Sbjct: 140 ASITQA 145
>gi|294873840|ref|XP_002766763.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239867926|gb|EEQ99480.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 411
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHN-EIARLNP-----RDCWYWLAGNCIN-PRC 56
E+ + C +FL CK G DC Y H+ R P + C + G C N C
Sbjct: 60 EVFSKTRMCKFFLRG--QCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADC 117
Query: 57 GFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIA 116
+ H + T V KTS+ C F+ NG C+ G +C HG +
Sbjct: 118 AYAHSRDELRATAD--------------VYKTSL-CRFWMNGSCNAGSKCRHAHGAHEL- 161
Query: 117 PNGKSSKSASAVTDSLLSENKTS 139
++ +A TD++L+ + T+
Sbjct: 162 ---RTRVPTAAGTDAVLTASTTN 181
>gi|294925662|ref|XP_002778975.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239887821|gb|EER10770.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 424
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHN-EIARLNP-----RDCWYWLAGNCIN-PRC 56
E+ + C +FL CK G DC Y H+ R P + C + G C N C
Sbjct: 69 EVFSKTRMCKFFLRG--QCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADC 126
Query: 57 GFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIA 116
+ H + T V KTS+ C F+ NG C+ G +C HG +
Sbjct: 127 AYAHSRDELRATAD--------------VYKTSL-CRFWMNGSCNAGSKCRHAHGAHEL- 170
Query: 117 PNGKSSKSASAVTDSLLSENKTS 139
++ +A TD++L+ + T+
Sbjct: 171 ---RTRVPTAAGTDAVLTASTTN 190
>gi|119617812|gb|EAW97406.1| chromosome 12 open reading frame 50, isoform CRA_a [Homo sapiens]
Length = 421
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 15 FLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSES 74
L P C G C +RH E A + C W C++P C FRH + ++
Sbjct: 2 ILRPPQPCGTGSQCRFRHCEEALGSDTVCSLWRERKCLDPLCRFRHMEMQ--------QN 53
Query: 75 VSLPC-QSSIPVNKTSIPCYFY 95
S+ C + P+ I C FY
Sbjct: 54 CSISCFWETQPLGCVKISCIFY 75
>gi|67483862|ref|XP_657151.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56474390|gb|EAL51762.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708917|gb|EMD48290.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 178
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C+KG +C++ H P + G C P C F+H E P ++
Sbjct: 48 CRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKH--------EDPQKA------- 92
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPD--------GIAPNGKSSK 123
IPC +Y GFC G +C H P G P GK K
Sbjct: 93 --------IPCEWYKRGFCKHGKKCKHGHVPKLMCPLFYLGFCPYGKKCK 134
>gi|294891186|ref|XP_002773463.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239878616|gb|EER05279.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 423
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHN-EIARLNP-----RDCWYWLAGNCIN-PRC 56
E+ + C +FL CK G DC Y H+ R P + C + G C N C
Sbjct: 68 EVFSKTRMCKFFLRG--QCKHGSDCGYAHDWSELRQAPDLRKTKMCQLYRKGQCPNGADC 125
Query: 57 GFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIA 116
+ H + T V KTS+ C F+ NG C+ G +C HG +
Sbjct: 126 AYAHSRDELRATAD--------------VYKTSL-CRFWMNGSCNAGSKCRHAHGAHEL- 169
Query: 117 PNGKSSKSASAVTDSLLSENKTS 139
++ +A TD++L+ + T+
Sbjct: 170 ---RTRVPTAAGTDAVLTASTTN 189
>gi|440909450|gb|ELR59359.1| Zinc finger CCCH domain-containing protein 8 [Bos grunniens mutus]
Length = 318
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEA 70
C YFL C KG C++ H+ C +++ G C C + H L
Sbjct: 210 CKYFLER--KCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNRLKIF---- 263
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGF-CSRGDRCSFLHGP 112
SS+ + PC FY G C +G+ C F H P
Sbjct: 264 ----------SSLTLELHEYPCKFYHTGAKCYQGEHCKFSHAP 296
>gi|407034648|gb|EKE37314.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 178
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C+KG +C++ H P + G C P C F+H E P ++
Sbjct: 48 CRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKH--------EDPQKA------- 92
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPD--------GIAPNGKSSK 123
IPC +Y GFC G +C H P G P GK K
Sbjct: 93 --------IPCEWYKRGFCKHGKKCKHGHVPKLMCPLFYLGFCPYGKKCK 134
>gi|241958348|ref|XP_002421893.1| CCCH zinc finger protein; transcription factor with zinc finger
DNA-binding motif, putative [Candida dubliniensis CD36]
gi|223645238|emb|CAX39849.1| CCCH zinc finger protein [Candida dubliniensis CD36]
Length = 235
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 19/103 (18%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C+KG++C+Y H+ + R C +L G C + C H P D + + + CQ+
Sbjct: 2 CEKGMNCKYDHD---KEKIRICPLFLLGKCYSKNCLLSHSPNDNNTPQC-RYFLGKSCQN 57
Query: 82 S-------IPVNKTSIPCY-------FYFNGFCSRGDRCSFLH 110
P N P Y F GFCSRG +C FLH
Sbjct: 58 PNCKYRHFKPANYND-PNYEIWTCRPFAIGGFCSRGKKCPFLH 99
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPAKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPATKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|393230567|gb|EJD38171.1| hypothetical protein AURDEDRAFT_116607 [Auricularia delicata
TFB-10046 SS5]
Length = 347
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 TEAPSESVSLPCQSSIPVN-KTSIPCYFYFNGFCSRGDRCSFLHGPD 113
TE + + P S+ N IPC FY + C+RG C +LHGPD
Sbjct: 110 TEQRTSTPPAPDDDSVQFNVGCGIPCRFYNHDRCTRGATCGYLHGPD 156
>gi|357135532|ref|XP_003569363.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Brachypodium distachyon]
Length = 479
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 34/176 (19%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIA--------------------RLNPRDCWYWLAGN 50
DC +++ + TC G C++ H + R DC +++
Sbjct: 106 DCAFYMRT-RTCMYGEGCKFDHPQWVPEGGIPNWKEAPKDEESYPERPGEPDCPFFMKTR 164
Query: 51 -C-INPRCGFRHPPLDAHVTEAPS-ESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCS 107
C +C F HP +VT A + S +SSI K S PC F+ G C G C
Sbjct: 165 RCGFASKCKFNHPKEKVNVTVAGTGNKGSQISESSISPVKPSEPCPFFPKGKCKFGTNCK 224
Query: 108 FLHGPDGIAP-NGKSSKSASAV---------TDSLLSENKTSAGDGTGSPPTEIRP 153
F H D P +G SKS + V +DS+ ++ T S IRP
Sbjct: 225 FSHAKDIEVPSSGHESKSTATVEAAGHNIAASDSVSAKKLTPVAQEHNSKGMPIRP 280
>gi|74025542|ref|XP_829337.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|29825363|gb|AAO92322.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei rhodesiense]
gi|70834723|gb|EAN80225.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 277
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 21 TCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C G +C Y H R P +Y G C NP C F+H V P + +
Sbjct: 69 ACVNGENCVYLHEYDDRYVPACAFYQRLGECSNPECPFQH---VVQVERQPECAAYR--R 123
Query: 81 SSIPVNKTS-------IPCYFYFNGFCSRGDRCSFLH 110
P+ PC FY GFC G +C+ H
Sbjct: 124 GFCPLGPKCRLRHVFRPPCVFYLTGFCPLGPKCALGH 160
>gi|402219041|gb|EJT99116.1| hypothetical protein DACRYDRAFT_24167 [Dacryopinax sp. DJM-731 SS1]
Length = 784
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 92 CYFYFNGFCSRGDRCSFLHGPDGI 115
C FY G C+RGDRC+FLH P +
Sbjct: 108 CSFYLAGKCNRGDRCTFLHDPAAL 131
>gi|156390433|ref|XP_001635275.1| predicted protein [Nematostella vectensis]
gi|156222367|gb|EDO43212.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 40.0 bits (92), Expect = 3.2, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
DC +F S C KG DC +RH A C W G C C FRH
Sbjct: 7 DCYFFYYS--QCPKGDDCPFRHEPAAVGCEITCKLWEQGKCFKKGCNFRH 54
>gi|388579009|gb|EIM19339.1| hypothetical protein WALSEDRAFT_61516 [Wallemia sebi CBS 633.66]
Length = 285
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 25/108 (23%)
Query: 4 ELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPP 62
E ++ T C ++L CKKG CE+ H R P W+ G C N C +RH
Sbjct: 33 ERERAVTVCKHWLRG--LCKKGDACEFLHEYDLRKMPECWWFVKWGWCANGEECLYRHTS 90
Query: 63 LDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
L+ E P Y GFC RG C F H
Sbjct: 91 LEGRKNECPE----------------------YLRGFCRRGPYCPFKH 116
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 28/109 (25%)
Query: 2 EEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHP 61
+++ ++ C ++L + C KG +CE+ H P W C P C FRH
Sbjct: 55 KKDFKRGTVVCRHWLRA--LCMKGDNCEFLHQYDMSKMPECRW---GMECQVPECPFRHV 109
Query: 62 PLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
P ++ + C FY GFCS G C + H
Sbjct: 110 P-----------------------DEERVECAFYKQGFCSHGSSCRYRH 135
>gi|402084385|gb|EJT79403.1| hypothetical protein GGTG_04487 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 914
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 31/111 (27%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
L+ T C +F A C KG C + H E A+ P L
Sbjct: 55 LKNPATICRFFQAG--KCHKGAGCAFLHEETAK-----------------------PVLP 89
Query: 65 AHVTEAPSESVSLPCQSSIPV---NKTSIPCYFYFNGFCSRGDRCSFLHGP 112
A T +E P ++P +++ +PC F+ G C G C F+H P
Sbjct: 90 AEATPTETEK---PAPETLPATVDSRSLVPCRFFAAGSCKNGSSCPFMHAP 137
>gi|310790674|gb|EFQ26207.1| hypothetical protein GLRG_01351 [Glomerella graminicola M1.001]
Length = 432
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C G C+ H+ + P C +++ GNC NP C + AH + +P +L C+S
Sbjct: 285 CANGESCDLSHDLTPQRTP-TCVHFIKGNCANPNCPY------AHSSVSPG---ALVCRS 334
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
F G+C +GD C H
Sbjct: 335 ------------FGMYGYCDKGDECEERH 351
>gi|410812199|ref|NP_001258604.1| zinc finger CCCH-type domain-containing-like [Homo sapiens]
Length = 805
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRRVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|119608908|gb|EAW88502.1| hCG1998723, isoform CRA_a [Homo sapiens]
gi|119608909|gb|EAW88503.1| hCG1998723, isoform CRA_a [Homo sapiens]
gi|119613723|gb|EAW93317.1| hCG1985901 [Homo sapiens]
Length = 805
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRRVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|198430431|ref|XP_002129809.1| PREDICTED: similar to Cleavage and polyadenylation specificity
factor subunit 4 (Cleavage and polyadenylation
specificity factor 30 kDa subunit) (CPSF 30 kDa subunit)
(NS1 effector domain-binding protein 1) (Neb-1) (No
arches homolog) [Ciona intestinalis]
Length = 286
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C ++H + + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMSKMPECYFYARFGRCDNKDCQYQHIDPASKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLH 110
++ I C Y GFC G +C F+H
Sbjct: 135 GATCKHRHRRKIMCMNYLVGFCPEGGKCKFVH 166
>gi|156102044|ref|XP_001616715.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805589|gb|EDL46988.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1293
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 14/75 (18%)
Query: 43 CWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSR 102
C YWL G C N C F H + T V KT+I ++ +GFCS
Sbjct: 196 CKYWLKGVCANVVCNFAHGEQELKYTYG--------------VYKTTICKHWKRDGFCSS 241
Query: 103 GDRCSFLHGPDGIAP 117
G C HG + P
Sbjct: 242 GINCRHAHGEGELQP 256
>gi|194379648|dbj|BAG63790.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRRVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDARFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CK+G DC++ H+E N W G ++H D + EA L +
Sbjct: 144 CKRGDDCKFSHDEQRNSNTG----WGEGGSRKDGGSWKHDQFDGSMKEAGRRIQMLSTKR 199
Query: 82 SIPV-----NKTSIPCYFYFNGFCSRGDRCSFLH 110
+ +K CY + G C+RGD C F H
Sbjct: 200 NDDGMNEREDKPRGVCYAFQRGECNRGDGCKFAH 233
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH-----------GPDGIAPNGKSSKSASAV 128
+ ++ + + C Y GFC G C F+H P P K V
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPPLPQPTQTQQKRTPQV 195
Query: 129 TDSLLSENKTSAGDG 143
+ S+N S G
Sbjct: 196 IGVMQSQNNNSGNRG 210
>gi|395826008|ref|XP_003786212.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and
polyadenylation specificity factor subunit 4-like
protein [Otolemur garnettii]
Length = 166
Score = 39.7 bits (91), Expect = 3.7, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
CKKG C H IAR+ P+ +Y G+C N +C F H + P CQ
Sbjct: 76 CKKGDHCGSLHQCNIARM-PQRYFYSKFGDCNNKQCPFLHVKPAFRSQDCPWYDQGF-CQ 133
Query: 81 SSIPVNKTSIP---CYFYFNGFCSRGDRCSF 108
+ +P C Y GFC G +C F
Sbjct: 134 NGPLCKYRHVPRIMCLNYLVGFCPEGPKCQF 164
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 28/110 (25%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH 60
M+++ ++ C ++L C KG CE+ H P W C P C FRH
Sbjct: 53 MKKDFKRGTVVCRHWLRG--LCMKGDSCEFLHQYDMSKMPECRW---GMECQVPECPFRH 107
Query: 61 PPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
P ++ + C FY GFCS G C + H
Sbjct: 108 VP-----------------------DEDRMECAFYRQGFCSHGPNCRYRH 134
>gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 42/148 (28%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
+C Y+L + CK G C Y H PR+ W NC+ G
Sbjct: 338 ECQYYLRTG-DCKFGSSCRYHH-------PRE-WVVPKTNCVLSPLG------------- 375
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYF-NGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVT 129
+P+ PC FY NG+C G C F H P G N + S SAS++T
Sbjct: 376 ------------LPLRPGVQPCTFYLQNGYCKFGSTCKFDH-PLG---NMRYSPSASSLT 419
Query: 130 DSLLSENKTSAGDGTGSP---PTEIRPN 154
D ++ + T +P +++RP+
Sbjct: 420 DMPVAPYPVGSSLATLAPSFSSSDLRPD 447
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 229 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 288
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 289 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 319
>gi|218188502|gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indica Group]
Length = 698
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEA 70
C ++L C++G C++ H+ + C ++ G+C+ C + H
Sbjct: 435 CHFYLHG--KCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDH---------- 482
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH------GPDGIAPNGKSSKS 124
E PC + F NG C RGD+C F H GP P+ K S +
Sbjct: 483 --ELSKYPCHN------------FMENGMCIRGDKCKFSHVIPTAEGPS--TPDAKKS-N 525
Query: 125 ASAVTDSLLSENKTS 139
AS+V + + +TS
Sbjct: 526 ASSVPEKANCQEQTS 540
>gi|392573906|gb|EIW67044.1| hypothetical protein TREMEDRAFT_45481 [Tremella mesenterica DSM
1558]
Length = 924
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 61/170 (35%), Gaps = 28/170 (16%)
Query: 41 RDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFC 100
R C Y+L G C C F H + C F+ G C
Sbjct: 536 RMCRYYLTGECRRSDCRFSH-------------------------DLERALCRFWLRGHC 570
Query: 101 SRGDRCSFLHG-PDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAP 159
++G C FLH P+G P+ + AS S S T+ +PP E P+ A
Sbjct: 571 AKGPNCEFLHHLPNGFDPSALTQAMASVELSSDGSARATTPTTSGYAPPDEF-PDLLAAR 629
Query: 160 LKLAVDVRVQPKGHLLQSAPKR-IPERRASPQISLSEGETVAVVKSDSMV 208
+ + R+ P +A KR P P I ++ V +S S V
Sbjct: 630 INRSNGNRLDPSRTRFANAVKRPAPGPVTLPSIQIAGSRFSPVSQSGSRV 679
>gi|75275745|sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=OsC3H7
gi|52076312|dbj|BAD45097.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEA 70
C ++L C++G C++ H+ + C ++ G+C+ C + H
Sbjct: 435 CHFYLHG--KCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDH---------- 482
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH------GPDGIAPNGKSSKS 124
E PC + F NG C RGD+C F H GP P+ K S +
Sbjct: 483 --ELSKYPCHN------------FMENGMCIRGDKCKFSHVIPTAEGPS--TPDAKKS-N 525
Query: 125 ASAVTDSLLSENKTS 139
AS+V + + +TS
Sbjct: 526 ASSVPEKANCQEQTS 540
>gi|324505807|gb|ADY42489.1| Zinc finger CCCH domain-containing protein 7 [Ascaris suum]
Length = 672
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 26/120 (21%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFR 59
+ +L ++ Y A TC G+ C Y HN + C +L+G C + CG+
Sbjct: 509 INNQLFTAESNACYEFAEHGTCTAGVFCVYEHNGSDSHSKESVCAGFLSGRCHSASCGYS 568
Query: 60 HPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG--PDGIAP 117
H L AH +P+ C FY CS +RC FLH DG+ P
Sbjct: 569 H-KLAAH---------------QMPI------CDFYRRMLCST-ERCPFLHVKYTDGLKP 605
>gi|255081837|ref|XP_002508137.1| predicted protein [Micromonas sp. RCC299]
gi|226523413|gb|ACO69395.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 86 NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSS 122
K+S PCY + G C+RGD C F H P+ AP S+
Sbjct: 256 QKSSAPCYAFQKGECTRGDACRFSHDPNAEAPQRSSA 292
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPTKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 3/161 (1%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTS 139
+ ++ + + C Y GFC G C F+H P P G + + ++ +
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGATEQPPLPQQTQPPTKQRAP 194
Query: 140 AGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
G N PL+ + KGH K
Sbjct: 195 QVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 235
>gi|343423882|emb|CCD18022.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 276
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 21 TCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C G +C Y H R P +Y G C NP C F+H + E + C
Sbjct: 69 ACVNGENCIYLHEYDDRYVPACAFYQRLGECSNPECPFQHVIQVENQAECAAYRRGF-CP 127
Query: 81 SSIPVNKTSI---PCYFYFNGFCSRGDRCSFLH 110
+ PC FY GFC G +CS H
Sbjct: 128 QGPRCRLRHVFHEPCVFYLTGFCPLGPKCSKGH 160
>gi|332862549|ref|XP_003317938.1| PREDICTED: zinc finger CCCH domain-containing protein 11A-like [Pan
troglodytes]
Length = 799
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 22/100 (22%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEA 70
DC +F S TC KG C +RH E A N C W G C C FRH +D +E
Sbjct: 7 DCYFFFYS--TCTKGDSCPFRHCEAALGNETVCTLWREGRCFRRVCRFRHMEIDKKRSE- 63
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
IPCY+ + C+F H
Sbjct: 64 -------------------IPCYWENQPTGCQKLNCAFHH 84
>gi|223996837|ref|XP_002288092.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977208|gb|EED95535.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 758
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGI 115
PC F+ G C+RGD C+F H P +
Sbjct: 345 PCSFFAKGMCNRGDACTFKHDPSAV 369
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS------------SKSASA 127
+ ++ + + C Y GFC G C F+H P P G + +K A
Sbjct: 136 PLCRHRRTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPTKRAPQ 194
Query: 128 VTDSLLSENKTSAGDG 143
V + S+N ++ G
Sbjct: 195 VIGVMQSQNSSAGNRG 210
>gi|222618708|gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
Length = 698
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPLDAHVTEA 70
C ++L C++G C++ H+ + C ++ G+C+ C + H
Sbjct: 435 CHFYLHG--KCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDH---------- 482
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH------GPDGIAPNGKSSKS 124
E PC + F NG C RGD+C F H GP P+ K S +
Sbjct: 483 --ELSKYPCHN------------FMENGMCIRGDKCKFSHVIPTAEGPS--TPDAKKS-N 525
Query: 125 ASAVTDSLLSENKTS 139
AS+V + + +TS
Sbjct: 526 ASSVPEKANCQEQTS 540
>gi|406602937|emb|CCH45493.1| Poly [ADP-ribose] polymerase 12 [Wickerhamomyces ciferrii]
Length = 524
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCI-NPRCGFRHPPL 63
+ K+N FL C + DC++ H+ ++ R C +WL GNC+ +C F+H L
Sbjct: 228 VDKKNKALCSFLIKNGQCLRS-DCKFSHD----IDQRACSFWLKGNCLAGDKCLFKH-DL 281
Query: 64 DAHVTEAPSESVSLPCQSSIPVNKTSI 90
D +P ES++ + P ++ SI
Sbjct: 282 DLPTPLSPPESLASLSTLTPPSSQPSI 308
>gi|167377692|ref|XP_001734501.1| mRNA 3'-end-processing protein YTH1 [Entamoeba dispar SAW760]
gi|165903960|gb|EDR29338.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba dispar
SAW760]
Length = 166
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
C+KG +C++ H P + G C P C F+H E P ++
Sbjct: 36 CRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKH--------EDPQKA------- 80
Query: 82 SIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPD--------GIAPNGKSSK 123
IPC +Y GFC G +C H P G P GK K
Sbjct: 81 --------IPCEWYKRGFCKHGKKCKHGHVPKLMCPLFYLGFCPYGKKCK 122
>gi|5931741|emb|CAB56623.1| zinc finger protein [Rattus norvegicus]
Length = 229
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 75 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 134
Query: 82 SIPVNKT-SIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDS--------L 132
+ T + C Y GFC G C F+H P P G + + +S
Sbjct: 135 PLQHRHTRRVICVNYLVGFCPEGTSCKFMH-PRFELPMGTTEQPPLPQQNSSNKPKPPRS 193
Query: 133 LSENKTSAGDGTGSPPTE 150
L K++ TG+P E
Sbjct: 194 LGPAKSNTMQATGTPAPE 211
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 80 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 139
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS------------SKSASA 127
+ ++ + + C Y GFC G C F+H P P G + +K A
Sbjct: 140 PLCRHRRTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPTKRAPQ 198
Query: 128 VTDSLLSENKTSAGDG 143
V + S+N ++ G
Sbjct: 199 VIGVMQSQNSSAGNRG 214
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|168010660|ref|XP_001758022.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690899|gb|EDQ77264.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2054
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Query: 7 KRNTDCVYFLASPLTCKKG-LDCEYRHN--EIARLNPRDCWYWLAGNCINPRCGFRHPPL 63
K+ CVY+ + CK+G C Y H+ ++A C +L G+C +P C H +
Sbjct: 1810 KKQAFCVYYTRFGV-CKRGDGKCLYIHDPEKVAV-----CTKFLRGSCSDPACRLTHKVI 1863
Query: 64 DAHVTEAPSESVSLPCQSSIP-----VNKTSIPCYFYFNGFCSRGDRCSFLH 110
+++ L + P VN + C + G+CS GD C+ H
Sbjct: 1864 PERMSDCSYFLEGLCTNENCPYRHVNVNPKAPICEGFLQGYCSDGDMCNKKH 1915
>gi|342184828|emb|CCC94310.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 279
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 14 YFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRH---------PPLD 64
Y P +C G C++ H ++ + L G+ ++ +RH PP D
Sbjct: 45 YRPCEPNSCPMGTGCKFVHADVD-------YTLLEGHPVHVNYIWRHESHCTYERRPPGD 97
Query: 65 AH----------VTEAPSESVSLPCQSSIPVNKTSIP-----CYFYFNGFCSRGDRCSFL 109
V PSE V L Q+ +P +T + ++YFNG C RG C+F+
Sbjct: 98 VLEVLMPNNKKPVDRIPSELV-LATQAVLPRRRTRVKPLSHCAHYYFNGLCHRGVACNFV 156
Query: 110 HGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTEIRPNPSEAPLKLAV 164
H + PN + S + +G GS I+ S AP +AV
Sbjct: 157 HAVT-VNPNVEGDLPRIFCR----SHRRQQSGGSKGSTKASIKSAGSNAPASIAV 206
>gi|15241989|ref|NP_200503.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis
thaliana]
gi|75264233|sp|Q9LTS7.1|C3H65_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=AtC3H65; AltName: Full=Protein EMBRYO DEFECTIVE
1789
gi|8777433|dbj|BAA97023.1| unnamed protein product [Arabidopsis thaliana]
gi|332009441|gb|AED96824.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis
thaliana]
Length = 675
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 29/122 (23%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C +G C++ H+ I C Y+ +C+ C F H + PC
Sbjct: 364 CHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDH------------DLSKYPCN 411
Query: 81 SSIPVNKTSIPCYFYFNGFCSRGDRCSFLH--GPDGIA--PNGKSSKSASAVTDSLLSEN 136
+ F GFC RGD C F H P + P+ + S++ +T + S
Sbjct: 412 N------------FITKGFCYRGDSCLFSHKGTPQSASDTPSANVTVSSTKITAASFSPQ 459
Query: 137 KT 138
KT
Sbjct: 460 KT 461
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNC-INPRCGFRHPPLDAH 66
R T C ++L CKKG CE+ H R P WY G C C + HP
Sbjct: 115 RTTVCKHWLRG--LCKKGESCEFLHEYNLRKMPECWWYAKYGYCSAGDECLYTHP--KER 170
Query: 67 VTEAPSESVSLPCQSSIPVNKT---SIPCYFYFNGFCSRGDRCSFLH 110
+ P + C + +PC Y +GFC G C+ H
Sbjct: 171 KIDCPDYARGF-CPLGPKCERKHARRVPCQNYLSGFCPLGKECALAH 216
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|324501456|gb|ADY40649.1| Zinc finger CCCH domain-containing protein 7 [Ascaris suum]
Length = 705
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 1 MEEELQKRNTDCVYFLASPLTCKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFR 59
+ +L ++ Y A TC G+ C Y HN + C +L+G C + CG+
Sbjct: 542 INNQLFTAESNACYEFAEHGTCTAGVFCVYEHNGSDSHSKESVCAGFLSGRCHSASCGYS 601
Query: 60 HPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHG--PDGIAP 117
H L AH +P+ C FY CS +RC FLH DG+ P
Sbjct: 602 H-KLAAH---------------QMPI------CDFYRRMLCST-ERCPFLHVKYTDGLKP 638
Query: 118 NGK 120
K
Sbjct: 639 CEK 641
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKS------------SKSASA 127
+ ++ + + C Y GFC G C F+H P P G + +K A
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH-PRFELPMGTTEQPPLPQQTQPPTKRAPQ 194
Query: 128 VTDSLLSENKTSAGDG 143
V + S+N ++ G
Sbjct: 195 VIGVMQSQNSSAGNRG 210
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPACKFMH 166
>gi|395538102|ref|XP_003771025.1| PREDICTED: uncharacterized protein C12orf50 homolog [Sarcophilus
harrisii]
Length = 543
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 24 KGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPC-QSS 82
+G C +RH E A + C W G C++P C FRH + ++ S+ C +
Sbjct: 87 QGSQCRFRHCEEALGSDTVCSLWREGKCLDPLCRFRHMEMQ--------QNCSISCFWET 138
Query: 83 IPVNKTSIPCYFY 95
P+ I C FY
Sbjct: 139 QPLGCVKISCVFY 151
>gi|302890977|ref|XP_003044371.1| hypothetical protein NECHADRAFT_21495 [Nectria haematococca mpVI
77-13-4]
gi|256725294|gb|EEU38658.1| hypothetical protein NECHADRAFT_21495 [Nectria haematococca mpVI
77-13-4]
Length = 682
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 91 PCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPPTE 150
PC FY G+C GD C+ LH A + SK + D + T G G+ TE
Sbjct: 3 PCRFYIKGYCKNGDTCTLLHEKPKEADGEEGSKENNKARDFIRELGGTWVRFGPGATATE 62
Query: 151 I 151
I
Sbjct: 63 I 63
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|297796577|ref|XP_002866173.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
gi|297312008|gb|EFH42432.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
Length = 666
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 29/123 (23%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C +G C++ H+ C Y+ +C+ C F H + PC
Sbjct: 354 CHEGDKCKFSHDTTPETKSSACCYFATQSCMKGDDCPFDH------------DLSKYPCN 401
Query: 81 SSIPVNKTSIPCYFYFNGFCSRGDRCSFLH--GPDGIA--PNGKSSKSASAVTDSLLSEN 136
+ F GFC RGD C F H P + P+ + S++ +T + S
Sbjct: 402 N------------FIIKGFCHRGDSCLFSHKGTPQSASDTPSANVTASSTNITAASFSPQ 449
Query: 137 KTS 139
KT+
Sbjct: 450 KTN 452
>gi|213401925|ref|XP_002171735.1| mRNA 3'-end-processing protein YTH1 [Schizosaccharomyces japonicus
yFS275]
gi|211999782|gb|EEB05442.1| mRNA 3'-end-processing protein YTH1 [Schizosaccharomyces japonicus
yFS275]
Length = 380
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAP 71
C FL+ C G C H+ + P C Y+L G C NP C + H + V P
Sbjct: 240 CPRFLSG--NCPNGEQCSLSHDRDEKRTPA-CRYFLKGKCTNPVCRYAHVHYNESVPVCP 296
Query: 72 SESVSLPCQSSIPVN-KTSIPCYFY-FNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVT 129
S C++ + K + C Y G C +C H P + K + SA
Sbjct: 297 DFSEYGMCENGLHCKMKHILKCTEYALKGACHNA-KCRLYHPPKELESTEKKEGAVSA-- 353
Query: 130 DSLLSENKT---SAGDGTGSPPTEI 151
+ + E K S+ +G+ P I
Sbjct: 354 EKMQGEQKQDSESSSTASGATPIFI 378
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCIEGPNCKFMH 166
>gi|320031382|gb|EFW13351.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 299
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
Query: 43 CWYWLAGNC-INPRCGFRHP-PLDAHVTEAPSESVSLPCQSSIPVNKTSIP-CYFYFNGF 99
C YW+ G C + RC F+H A + PSE + K I C F+ G
Sbjct: 3 CRYWIRGKCQLGDRCKFQHSLSTQASGGDTPSE-----------IKKKEIAHCKFWLRGN 51
Query: 100 CSRGDRCSFLHGP 112
C RG +C F H P
Sbjct: 52 CIRGTKCWFRHVP 64
>gi|307110415|gb|EFN58651.1| hypothetical protein CHLNCDRAFT_140910 [Chlorella variabilis]
Length = 713
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 43 CWYWLAGNCINP-RCGFRHPPLDAHVTEAPSESVSL--PCQSSIPVNKTSIPCYFYFNGF 99
C ++ AG+C + RC + H + E P P Q + + ++ C F+ NG+
Sbjct: 450 CRHYQAGSCSHGNRCTYAHGEHELRRPERPQGQYQKQGPGQPARHPGEKTVVCRFWQNGY 509
Query: 100 CSRGDRCSFLHG 111
C G RC+FLHG
Sbjct: 510 CKHGPRCTFLHG 521
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPTCKFMH 166
>gi|193788659|ref|NP_001123357.1| putative cleavage and polyadenylation specificity factor subunit
4-like protein [Homo sapiens]
gi|332848949|ref|XP_001149545.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan troglodytes]
gi|206729925|sp|A6NMK7.3|CPS4L_HUMAN RecName: Full=Putative cleavage and polyadenylation specificity
factor subunit 4-like protein
gi|187957320|gb|AAI57871.1| CPSF4L protein [Homo sapiens]
Length = 179
Score = 38.9 bits (89), Expect = 7.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG C++ H P +Y G+C N C F H + P C+
Sbjct: 76 CKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGF-CKD 134
Query: 82 SIPVNKTSIP---CYFYFNGFCSRGDRCSF 108
+P C Y GFC G +C F
Sbjct: 135 GPLCKYRHVPRIMCLNYLVGFCPEGPKCQF 164
>gi|238879791|gb|EEQ43429.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 234
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 39/113 (34%)
Query: 22 CKKGLDCEYRHN-EIARLNPR-----------------------DCWYWLAGNCINPRCG 57
C KG++C+Y H+ E R+ P C Y+L +C NP C
Sbjct: 2 CDKGINCKYDHDKEKIRICPLYLLGKCYSKNCLLSHSSNDNNTPQCRYFLDKSCQNPNCK 61
Query: 58 FRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
+RH AH + E + C+ F GFCSRG +C FLH
Sbjct: 62 YRHFK-PAHYNDPNYEIWT--CRP------------FAIGGFCSRGKKCPFLH 99
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCIEGPNCKFMH 166
>gi|343470800|emb|CCD16609.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343470954|emb|CCD16504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 277
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 12/97 (12%)
Query: 21 TCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C G +C Y H R P +Y G C NP C F+H V P + +
Sbjct: 69 ACVNGENCVYLHEYDDRYVPACAFYQRLGECSNPECPFQH---VVQVERQPECAAYR--R 123
Query: 81 SSIPVNKTS-------IPCYFYFNGFCSRGDRCSFLH 110
P+ PC FY GFC G +C H
Sbjct: 124 GFCPMGPKCRLRHVFRQPCVFYITGFCPLGPKCDMGH 160
>gi|335309907|ref|XP_003361816.1| PREDICTED: zinc finger protein 160-like, partial [Sus scrofa]
Length = 813
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 34/182 (18%)
Query: 372 HSIVHSTRRHESSRLMGRIQGRHRGLLLHGRL--------ASEFGKNYIE-------SHG 416
H ++H+ R + G++ R+ L H RL + GK++I+
Sbjct: 511 HQVIHTGERPYKCDICGKVFSRNSILASHQRLHTGEKPYTCNVCGKSFIQRSLLWIHEKV 570
Query: 417 HKGTLPNGANQHGWARHSKSNILRQH---HKGKRLLKRKSHLSAISRKPFSSERRSSQTE 473
H G P NQ G A +S IL QH H G+ K ++ K F+ + SQ +
Sbjct: 571 HSGEKPYKCNQCGKAFPVRS-ILTQHMRIHTGE-----KPYICIECGKAFTKQSNLSQHK 624
Query: 474 TAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKP--LSEILKEKRRPGTV 531
T TG E+ K EE G F +V LSR G KP S +K R +
Sbjct: 625 TIHTG--------EKPYKCEECGKAFTQVSSLSRHQKRHPGKKPQQCSGCVKAFIRHSQL 676
Query: 532 SD 533
SD
Sbjct: 677 SD 678
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPACKFMH 166
>gi|354466607|ref|XP_003495765.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Cricetulus griseus]
Length = 193
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C+KG C + H +I R+ P ++ GNC N C F H + + P C+
Sbjct: 76 CRKGDCCNFLHQYDIDRM-PVCYFHSKFGNCSNKDCSFLHVKPAPNAQDCPWYDRGF-CK 133
Query: 81 SSIPVNKT----SIPCYFYFNGFCSRGDRCSFLH 110
P+ K + C YF GFC +G +C F H
Sbjct: 134 DVGPLCKYHHVHQVMCLNYFTGFCPKGPKCQFGH 167
>gi|429961729|gb|ELA41274.1| hypothetical protein VICG_01647 [Vittaforma corneae ATCC 50505]
Length = 176
Score = 38.9 bits (89), Expect = 7.5, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKK CE+ H + P ++ + G C N C F H D+ E
Sbjct: 62 CKKNEKCEFLHEYNLKKMPECFFFNVYGVCNNSDCIFLHLRPDSAARECIWYKRGFCKNG 121
Query: 82 SIPVNK--TSIPCYFYFNGFCSRGDRCSFLH 110
+ NK ++ C+ Y+ GFC G C F H
Sbjct: 122 ASCKNKHNRAMMCWDYYAGFCKNGPFCKFAH 152
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 82 SIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ ++ + + C Y GFC G C F+H
Sbjct: 136 PLCRHRHTRRVICVNYLVGFCPEGPSCKFMH 166
>gi|410931249|ref|XP_003979008.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Takifugu rubripes]
Length = 249
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSE--N 136
+ + C Y GFC G C F+H P P G S + + S+ N
Sbjct: 135 GPDCRHRHTRRVICVNYLVGFCPEGRSCKFMH-PRFELPMGASEQPPLPLQSQNQSKLTN 193
Query: 137 KTSAGDGTGSPPTE---IRPNPSEAPLKLAVDVRVQPKGHLLQSAPK 180
+ + T PT+ + N PL + +GH K
Sbjct: 194 SSPGINNTQMMPTQQNNMSTNRGPRPLDQVTCFKCGDRGHYANKCTK 240
>gi|348511281|ref|XP_003443173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Oreochromis niloticus]
Length = 265
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSK 123
+ + C Y GFC G C F+H P P G S +
Sbjct: 135 GPDCRHRHTRRVICVNYLVGFCPEGKSCKFMH-PRFELPMGASEQ 178
>gi|326427305|gb|EGD72875.1| hypothetical protein PTSG_12192 [Salpingoeca sp. ATCC 50818]
Length = 1063
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIP-CYFYFNGFCSRGDRCSFLH 110
T P+++V +S P N + P C ++ +G C+RG +C FLH
Sbjct: 93 TTPKPADAVKSKSTASTPANTEATPVCTYFQSGSCTRGKKCRFLH 137
>gi|302837343|ref|XP_002950231.1| hypothetical protein VOLCADRAFT_90642 [Volvox carteri f. nagariensis]
gi|300264704|gb|EFJ48899.1| hypothetical protein VOLCADRAFT_90642 [Volvox carteri f. nagariensis]
Length = 2490
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 92 CYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSENKTSAGDGTGSPP 148
C+F+ +G+C +G+RC FLH AP S ++ V S S G G+ PP
Sbjct: 2176 CHFFLSGYCQKGERCRFLHHIP--APAAGSPLPSAHVAISGGSSTVLQLGQGSPPPP 2230
>gi|261335311|emb|CBH18305.1| CPSF 30 kDa subunit [Trypanosoma brucei gambiense DAL972]
Length = 277
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 21 TCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
C G +C Y H R P +Y G C NP C F+H V P + +
Sbjct: 69 ACVNGENCVYLHEYDDRYVPACAFYQRLGECSNPECPFQH---VVQVERQPECAAYR--R 123
Query: 81 SSIPVNKTS-------IPCYFYFNGFCSRGDRCSFLH 110
P+ PC FY GFC G +C+ H
Sbjct: 124 GFCPLGPKCRLRHVFRPPCVFYLTGFCPLGPKCASGH 160
>gi|358335246|dbj|GAA31229.2| zinc finger CCCH domain-containing protein 6 [Clonorchis sinensis]
Length = 622
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 35/103 (33%), Gaps = 31/103 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCIN-PRCGFRHPPLDAHVTEA 70
C YF+ C KG C + H+ C ++ G C P C + H
Sbjct: 74 CRYFMEG--RCNKGDSCPFAHDFQPTKKQELCKFYAVGVCSKGPTCLYLH---------- 121
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFY-FNGFCSRGDRCSFLHGP 112
+PC FY F G CS GD C F H P
Sbjct: 122 -----------------EEVPCKFYHFFGKCSHGDSCKFSHEP 147
>gi|224109138|ref|XP_002315096.1| predicted protein [Populus trichocarpa]
gi|222864136|gb|EEF01267.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 10 TDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWY---WLAGNCINPRCGFRHPPLDAH 66
DC ++L + +CK G C Y H E +NP +A + N G +P +
Sbjct: 349 VDCPFYLKT-GSCKYGATCRYNHPERTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIY 407
Query: 67 VTEAPSESVSLPCQSSIPVNKTSIPCYFYF-NGFCSRGDRCSFLHGPDGIAPNGK 120
T P S+ + P C FY G C G+RC F H D AP K
Sbjct: 408 QTIDPRLSMLGVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPTEK 462
>gi|381205568|ref|ZP_09912639.1| OstA protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 839
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 163 AVDVRVQPKGHLL--QSAPKRIPERRASPQISLSEGETVAVVKSDSMVAAEGFMKTKSHL 220
+ D+RV+ + ++ ++ R + R EG+ V ++ ++++ A+GF++ +
Sbjct: 29 STDLRVEARSYIFDPETEIYRYEDARFEWGTIALEGQKVEFLRKENLIVAQGFVRLREGS 88
Query: 221 YTDWSSDEHADDHVEPEERLESSPGFDVLVDNENRAENLGFEDDSEYLLATNREHREL-N 279
T + ERLE + G DN + F D T RE R +
Sbjct: 89 ITLIA------------ERLEINLG-----DNSGVFREVFFFDAKTEAYITAREVRRVPE 131
Query: 280 GHFLGYDFEGPIEYDPMYPESEPHEGETYNVHYYLDN 316
G+F+GYD + PE E VHYY +N
Sbjct: 132 GYFIGYD----CTFTTCIPEQPAWEIRGSTVHYYPEN 164
>gi|149246628|ref|XP_001527739.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447693|gb|EDK42081.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 545
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 47/128 (36%)
Query: 11 DCVYFLASPLTCKKGLDCEYRHNEIA----------------------RLNPRD---CWY 45
+C Y+ + + C++G C Y H+++ R N + C Y
Sbjct: 232 NCRYYTRTGI-CQRGASCNYFHDQLKIKICPHFLNDKCIGNSMCLLSHRPNEHNTPMCRY 290
Query: 46 WLAGNCINPRCGFRH--PPLDAHVTEAPSES-VSLPCQSSIPVNKTSIPCYFYFNGFCSR 102
+L GNC N RC + H PP H + E V P F G+C R
Sbjct: 291 FLQGNCSNTRCRYMHSTPP---HFKDPSCEVWVCRP---------------FAIGGWCQR 332
Query: 103 GDRCSFLH 110
G C F+H
Sbjct: 333 GRECPFMH 340
>gi|354544945|emb|CCE41670.1| hypothetical protein CPAR2_802200 [Candida parapsilosis]
Length = 461
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 10 TDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTE 69
+C YF + C+KG +C Y HN + R C Y+L G C + C H P + H T
Sbjct: 214 VNCHYFTSLGF-CEKGSNCPYVHN---KKKIRICPYYLNGYCADSNCLLSHTP-NCHNTP 268
Query: 70 APSESVSLPCQSS-------IPVN------KTSIPCYFYFNGFCSRGDRCSFLH 110
++ C S +P + + SI F +C RG C FLH
Sbjct: 269 LCYFNLENRCTKSQCRYSHLVPEHYGDKKYEISICRPFSVGHWCPRGRNCPFLH 322
>gi|255722107|ref|XP_002545988.1| hypothetical protein CTRG_00769 [Candida tropicalis MYA-3404]
gi|240136477|gb|EER36030.1| hypothetical protein CTRG_00769 [Candida tropicalis MYA-3404]
Length = 236
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 39/115 (33%)
Query: 22 CKKGLDCEYRHN-EIARLNP---------RDCW--------------YWLAGNCINPRCG 57
C+KG C+Y H+ ++ R+ P RDC Y+L C N C
Sbjct: 2 CEKGSLCKYVHDKDMIRICPLFLAGKCYGRDCLLSHTPNDCNTPVCRYYLDRTCTNSNCK 61
Query: 58 FRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGP 112
+RH D + + P+ + L C+ F G+C+RG +C FLH P
Sbjct: 62 YRHFKPDHY--DDPNYEI-LTCRP------------FAITGYCARGKKCPFLHLP 101
>gi|355568881|gb|EHH25162.1| hypothetical protein EGK_08934 [Macaca mulatta]
gi|355754343|gb|EHH58308.1| hypothetical protein EGM_08126 [Macaca fascicularis]
Length = 179
Score = 38.5 bits (88), Expect = 8.8, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
CKKG C++ H +I R+ P +Y G+C N C F H + P C+
Sbjct: 76 CKKGDHCKFLHQYDITRM-PECYFYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGF-CK 133
Query: 81 SSIPVNKTSIP---CYFYFNGFCSRGDRCSF 108
+P C Y GFC G +C F
Sbjct: 134 DGPLCKYRHVPRIMCLNYLVGFCPEGPKCRF 164
>gi|389585724|dbj|GAB68454.1| hypothetical protein PCYB_133280 [Plasmodium cynomolgi strain B]
Length = 1621
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 14/75 (18%)
Query: 43 CWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSR 102
C YW+ G C N C F H + T V KT+I ++ +G CS
Sbjct: 231 CKYWIKGVCANVECNFAHGEQELKYTHG--------------VYKTTICKHWKRDGTCSS 276
Query: 103 GDRCSFLHGPDGIAP 117
G C HG + P
Sbjct: 277 GINCRHAHGESELQP 291
>gi|427788143|gb|JAA59523.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Rhipicephalus pulchellus]
Length = 283
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 8 RNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGN-CINPRCGFRHPPLDAH 66
R C ++L CKKG CE+ H E +C+++ N C N C F H +A
Sbjct: 64 RTVVCKHWLRG--LCKKGDQCEFLH-EFDMTKMPECYFYSRFNACSNKECPFLHIDPEAK 120
Query: 67 VTEAPSESVSLPCQSSIPVNKTS--IPCYFYFNGFCSRGDRCSFLH 110
+ + P I ++ + + C Y GFC G C F+H
Sbjct: 121 IKDCPWYDRGFCRHGPICRHRHTRRVMCINYLCGFCPDGPECKFMH 166
>gi|443685956|gb|ELT89398.1| hypothetical protein CAPTEDRAFT_118081, partial [Capitella teleta]
Length = 88
Score = 38.5 bits (88), Expect = 9.2, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 22/106 (20%)
Query: 5 LQKRNTDCVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLD 64
+ + DC +F S C KG C +RH A + C W G C C +RH
Sbjct: 1 MAQNGDDCYFFYYS--NCAKGDQCPFRHQAAALGSEEVCDLWREGRCFRTVCVYRH---- 54
Query: 65 AHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLH 110
I N+++ CY+ C F+H
Sbjct: 55 ----------------MDIKTNRSNTACYWETQPSGCTKAHCPFMH 84
>gi|339245011|ref|XP_003378431.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
gi|316972658|gb|EFV56324.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
Length = 310
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 75/225 (33%), Gaps = 17/225 (7%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLP--- 78
CKKG CE+ H P +Y C N C FRH ++ + + P
Sbjct: 89 CKKGDQCEFLHEYDVSKMPECFFYSKYNACSNKECPFRHIDPESKLKDCPWYDRGFCRHG 148
Query: 79 --CQSSIPVNKTSIPCYFYFNGFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLLSEN 136
C++ ++ + C + NGFC G +C H P+ PN S ++ ++ +
Sbjct: 149 PHCKNR---HRRRVMCLSFLNGFCPDGPKCLRSH-PNFDLPNADISSQRKQQSNFIVCHH 204
Query: 137 KTSAGDGTGSPPTEIRPNPSEAPLKLAVDVRVQPKGHLLQSAPKRIPERRASPQISLSEG 196
G S P + + P G Q+AP R G
Sbjct: 205 CGEIGHKVSSCPNLTSGE--------GLHTNLPPFGRNFQAAPSDQTRRPLQDVTCYKCG 256
Query: 197 ETVAVVKSDSMVAAEGFMKTKSHLYTDWSSDEHADDHVEPEERLE 241
+ S T + + DEH P++RL+
Sbjct: 257 DKGHYANKCSRGTFAFLAPTAALSHEARLKDEHVTHANVPQQRLQ 301
>gi|9711035|dbj|BAB07796.1| no arches [Danio rerio]
Length = 190
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG CE+ H P +Y G C N C F H ++ + + P C+
Sbjct: 76 CKKGDQCEFLHEYDMTKMPECYFYTKFGECSNKECPFLHIDPESKIKDCPWYDRGF-CKH 134
Query: 82 SIPV---NKTSIPCYFYFNGFCSRGDRCSFLH 110
+ + C Y GFC G C F+H
Sbjct: 135 GPDCRHRHTRRVICVNYLVGFCPEGKSCKFMH 166
>gi|240976408|ref|XP_002402385.1| hypothetical protein IscW_ISCW015961 [Ixodes scapularis]
gi|215491165|gb|EEC00806.1| hypothetical protein IscW_ISCW015961 [Ixodes scapularis]
Length = 1100
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 43 CWYWLAGNCINPRCGFRHPPLDA-HVTEAPSESVSLPCQSSIPVNKTSIPCYFYFNGFCS 101
C ++L C+ R P DA + + P P + C FY +G+C+
Sbjct: 207 CKFYLESKCVKVRGA---PTEDAGKASSGATGGAECPFSHDAPQARKRDMCKFYLSGYCA 263
Query: 102 RGDRCSFLH 110
RG+ CSF+H
Sbjct: 264 RGEHCSFMH 272
>gi|443708907|gb|ELU03826.1| hypothetical protein CAPTEDRAFT_223326 [Capitella teleta]
Length = 477
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 31/101 (30%)
Query: 12 CVYFLASPLTCKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPR-CGFRHPPLDAHVTEA 70
C +++ C KG DC++ H C ++++ +C R C + H
Sbjct: 292 CRFYMEG--KCNKGYDCQFNHGFDPPKKFEVCKFYISDSCTKGRDCLYVH---------- 339
Query: 71 PSESVSLPCQSSIPVNKTSIPCYFYF-NGFCSRGDRCSFLH 110
+ PC F+ +G+C RGD C F H
Sbjct: 340 -----------------SEFPCRFHHKHGYCERGDNCKFSH 363
>gi|397478491|ref|XP_003810578.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan paniscus]
Length = 147
Score = 38.5 bits (88), Expect = 9.8, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 22 CKKGLDCEYRHNEIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQS 81
CKKG C++ H P +Y G+C N C F H + P C+
Sbjct: 44 CKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGF-CKD 102
Query: 82 SIPVNKTSIP---CYFYFNGFCSRGDRCSF 108
+P C Y GFC G +C F
Sbjct: 103 GPLCKYRHVPRIMCLNYLVGFCPEGPKCQF 132
>gi|72389074|ref|XP_844832.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176319|gb|AAX70431.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801366|gb|AAZ11273.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 566
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 87 KTSIPCYFYFNGFCSRGDRCSFLHGPD 113
KTS+ YF NG C GDRC+F HG D
Sbjct: 16 KTSLCTYFMENGECQFGDRCAFAHGED 42
>gi|425768612|gb|EKV07130.1| hypothetical protein PDIG_74040 [Penicillium digitatum PHI26]
gi|425776037|gb|EKV14275.1| hypothetical protein PDIP_44520 [Penicillium digitatum Pd1]
Length = 739
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 26/96 (27%)
Query: 39 NPRDCWYWLA-GNCINPRCGFRHPPLDAHVTEAPSESVSLPCQSSIPVNKTSIPCYFYFN 97
+P C YWL+ G C+ C F H L HV C ++
Sbjct: 280 SPVVCKYWLSTGQCLRADCRFSHD-LTTHV------------------------CKYWVM 314
Query: 98 GFCSRGDRCSFLHGPDGIAPNGKSSKSASAVTDSLL 133
G C GD C F H P + N + S+ + SL
Sbjct: 315 GNCLAGDGCPFSHDPSALIGNLSVTDSSRPASPSLF 350
>gi|402900921|ref|XP_003913409.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Papio anubis]
Length = 179
Score = 38.5 bits (88), Expect = 9.9, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 22 CKKGLDCEYRHN-EIARLNPRDCWYWLAGNCINPRCGFRHPPLDAHVTEAPSESVSLPCQ 80
CKKG C++ H +I R+ P +Y G+C N C F H + P C+
Sbjct: 76 CKKGDHCKFLHQYDITRM-PECYFYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGF-CK 133
Query: 81 SSIPVNKTSIP---CYFYFNGFCSRGDRCSF 108
+P C Y GFC G +C F
Sbjct: 134 DGPLCKYRHVPRIMCLNYLVGFCPEGPKCRF 164
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,300,522,439
Number of Sequences: 23463169
Number of extensions: 420580877
Number of successful extensions: 828405
Number of sequences better than 100.0: 775
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 605
Number of HSP's that attempted gapping in prelim test: 826204
Number of HSP's gapped (non-prelim): 2051
length of query: 539
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 391
effective length of database: 8,886,646,355
effective search space: 3474678724805
effective search space used: 3474678724805
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)