Query 009241
Match_columns 539
No_of_seqs 236 out of 2043
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 22:01:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ju2_A HydroxynitrIle lyase; f 100.0 3.4E-76 1.2E-80 626.7 37.0 492 32-538 11-520 (536)
2 3fim_B ARYL-alcohol oxidase; A 100.0 6E-75 2E-79 616.1 38.0 463 47-535 2-566 (566)
3 3qvp_A Glucose oxidase; oxidor 100.0 6.2E-74 2.1E-78 608.9 39.1 469 45-537 17-580 (583)
4 3q9t_A Choline dehydrogenase a 100.0 1.5E-71 5E-76 591.4 35.3 458 45-534 4-572 (577)
5 3t37_A Probable dehydrogenase; 100.0 2.7E-69 9.2E-74 576.7 37.4 459 46-533 16-522 (526)
6 1gpe_A Protein (glucose oxidas 100.0 7E-69 2.4E-73 575.6 36.5 471 45-535 22-583 (587)
7 2jbv_A Choline oxidase; alcoho 100.0 1.1E-67 3.6E-72 562.7 38.8 461 46-534 12-529 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 1E-58 3.6E-63 495.8 31.0 448 45-534 5-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 1.2E-57 4.1E-62 481.7 28.3 436 46-537 4-502 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 3.7E-57 1.3E-61 478.0 27.8 432 43-537 7-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.1E-46 3.7E-51 405.7 26.2 444 44-534 43-612 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 1.6E-15 5.6E-20 160.1 16.4 190 44-289 38-270 (510)
13 1y0p_A Fumarate reductase flav 99.6 4E-14 1.4E-18 151.6 16.3 189 46-289 125-323 (571)
14 1qo8_A Flavocytochrome C3 fuma 99.6 2.5E-14 8.6E-19 152.9 14.6 190 45-289 119-318 (566)
15 4dgk_A Phytoene dehydrogenase; 99.5 1.3E-13 4.4E-18 145.5 13.7 70 207-290 216-285 (501)
16 1d4d_A Flavocytochrome C fumar 99.4 6.5E-13 2.2E-17 141.9 15.3 188 46-288 125-322 (572)
17 2bs2_A Quinol-fumarate reducta 99.4 1.1E-12 3.8E-17 141.4 14.6 57 218-284 164-221 (660)
18 2h88_A Succinate dehydrogenase 99.4 2.7E-12 9.1E-17 137.5 14.6 57 218-284 161-218 (621)
19 2wdq_A Succinate dehydrogenase 99.4 3.6E-12 1.2E-16 136.3 13.4 58 218-284 149-207 (588)
20 1chu_A Protein (L-aspartate ox 99.3 4E-12 1.4E-16 134.7 13.1 62 218-284 144-209 (540)
21 3dme_A Conserved exported prot 99.3 2.4E-12 8.4E-17 129.7 7.9 63 218-293 156-219 (369)
22 1kf6_A Fumarate reductase flav 99.3 3.2E-11 1.1E-15 129.3 16.3 58 218-285 140-199 (602)
23 2i0z_A NAD(FAD)-utilizing dehy 99.3 2.1E-11 7.3E-16 126.4 13.6 55 218-286 140-194 (447)
24 3da1_A Glycerol-3-phosphate de 99.3 1.3E-11 4.6E-16 131.3 11.9 66 218-294 176-242 (561)
25 3nyc_A D-arginine dehydrogenas 99.2 8.2E-12 2.8E-16 126.6 7.3 36 45-80 7-42 (381)
26 2rgh_A Alpha-glycerophosphate 99.2 1.4E-10 4.8E-15 123.7 16.9 65 218-293 194-259 (571)
27 3v76_A Flavoprotein; structura 99.2 8.4E-12 2.9E-16 127.7 6.8 37 44-80 24-61 (417)
28 3gyx_A Adenylylsulfate reducta 99.2 2.2E-11 7.6E-16 131.2 10.2 59 219-284 173-234 (662)
29 1jnr_A Adenylylsulfate reducta 99.2 5.4E-11 1.8E-15 128.7 12.9 59 219-284 158-219 (643)
30 1y56_B Sarcosine oxidase; dehy 99.2 3.3E-11 1.1E-15 122.3 9.7 36 44-79 2-38 (382)
31 3dje_A Fructosyl amine: oxygen 99.1 2.1E-10 7.3E-15 118.6 12.7 38 44-81 3-42 (438)
32 2e5v_A L-aspartate oxidase; ar 99.1 1.4E-10 4.9E-15 120.8 11.3 53 218-284 125-177 (472)
33 1ryi_A Glycine oxidase; flavop 99.1 8E-11 2.8E-15 119.4 9.0 40 41-80 11-51 (382)
34 2qcu_A Aerobic glycerol-3-phos 99.1 4.9E-10 1.7E-14 117.9 14.4 60 218-289 155-215 (501)
35 2oln_A NIKD protein; flavoprot 99.1 1.4E-10 4.8E-15 118.3 10.0 35 46-80 3-38 (397)
36 2gag_B Heterotetrameric sarcos 99.1 3.9E-10 1.3E-14 115.2 12.5 36 45-80 19-57 (405)
37 2gqf_A Hypothetical protein HI 99.1 1.4E-10 4.7E-15 118.2 8.8 35 46-80 3-38 (401)
38 1pj5_A N,N-dimethylglycine oxi 99.1 2.8E-10 9.7E-15 127.1 11.2 60 218-293 157-216 (830)
39 3ps9_A TRNA 5-methylaminomethy 99.1 2.9E-10 1E-14 124.1 11.1 35 46-80 271-306 (676)
40 3pvc_A TRNA 5-methylaminomethy 99.1 3.8E-10 1.3E-14 123.3 11.0 35 46-80 263-298 (689)
41 1rp0_A ARA6, thiazole biosynth 99.0 1.3E-09 4.4E-14 105.8 10.1 35 46-80 38-74 (284)
42 3axb_A Putative oxidoreductase 99.0 6.3E-10 2.2E-14 115.4 8.3 33 46-78 22-56 (448)
43 3ka7_A Oxidoreductase; structu 99.0 1.3E-09 4.6E-14 112.0 10.7 57 218-289 202-258 (425)
44 3cgv_A Geranylgeranyl reductas 99.0 2.1E-09 7.1E-14 109.4 11.8 55 218-283 108-162 (397)
45 2gf3_A MSOX, monomeric sarcosi 99.0 6.1E-10 2.1E-14 113.1 7.8 34 47-80 3-37 (389)
46 2uzz_A N-methyl-L-tryptophan o 99.0 4.6E-10 1.6E-14 113.3 6.8 34 47-80 2-36 (372)
47 3nlc_A Uncharacterized protein 99.0 9.4E-10 3.2E-14 115.7 9.1 36 45-80 105-141 (549)
48 3atr_A Conserved archaeal prot 99.0 1.2E-09 4E-14 113.5 9.2 56 218-283 106-162 (453)
49 3oz2_A Digeranylgeranylglycero 98.9 2.1E-09 7.1E-14 109.1 9.1 34 47-80 4-38 (397)
50 3e1t_A Halogenase; flavoprotei 98.9 1.9E-09 6.3E-14 113.8 8.5 57 218-284 117-173 (512)
51 3jsk_A Cypbp37 protein; octame 98.9 7E-09 2.4E-13 101.8 11.2 35 46-80 78-115 (344)
52 3nrn_A Uncharacterized protein 98.9 5.1E-09 1.7E-13 107.6 10.4 66 207-289 184-249 (421)
53 3nix_A Flavoprotein/dehydrogen 98.8 9.5E-09 3.3E-13 105.4 9.3 35 46-80 4-39 (421)
54 3p1w_A Rabgdi protein; GDI RAB 98.8 1.1E-08 3.7E-13 105.4 9.1 40 44-83 17-57 (475)
55 3i3l_A Alkylhalidase CMLS; fla 98.7 2.4E-08 8.1E-13 106.6 10.4 35 46-80 22-57 (591)
56 2gjc_A Thiazole biosynthetic e 98.7 2.9E-08 9.9E-13 96.9 9.9 35 46-80 64-101 (326)
57 2zxi_A TRNA uridine 5-carboxym 98.7 2.6E-08 8.9E-13 105.3 9.7 34 46-79 26-60 (637)
58 1yvv_A Amine oxidase, flavin-c 98.7 2.1E-08 7.1E-13 99.5 7.9 34 47-80 2-36 (336)
59 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 2.8E-08 9.6E-13 99.0 8.6 33 48-80 2-38 (342)
60 2gmh_A Electron transfer flavo 98.7 4.7E-08 1.6E-12 104.5 10.4 59 218-285 150-219 (584)
61 3ces_A MNMG, tRNA uridine 5-ca 98.7 3.5E-08 1.2E-12 104.7 8.8 34 46-79 27-61 (651)
62 3f8d_A Thioredoxin reductase ( 98.7 6.8E-07 2.3E-11 87.7 17.6 62 221-293 199-261 (323)
63 3c4n_A Uncharacterized protein 98.7 1.2E-08 4.3E-13 104.1 5.2 35 46-80 35-72 (405)
64 4fk1_A Putative thioredoxin re 98.6 1.2E-07 4.2E-12 92.6 10.7 35 45-79 4-39 (304)
65 4a9w_A Monooxygenase; baeyer-v 98.6 4.2E-08 1.5E-12 97.9 7.4 34 47-80 3-37 (357)
66 2qa1_A PGAE, polyketide oxygen 98.6 1.1E-07 3.6E-12 99.8 10.7 39 42-80 6-45 (500)
67 3cty_A Thioredoxin reductase; 98.6 2.5E-07 8.5E-12 91.0 12.6 66 218-293 196-262 (319)
68 3ihg_A RDME; flavoenzyme, anth 98.6 1.6E-07 5.4E-12 99.6 11.9 35 46-80 4-39 (535)
69 2cul_A Glucose-inhibited divis 98.6 1.9E-07 6.4E-12 87.5 11.1 33 47-79 3-36 (232)
70 3cp8_A TRNA uridine 5-carboxym 98.6 4.3E-08 1.5E-12 104.0 7.0 35 45-79 19-54 (641)
71 3rp8_A Flavoprotein monooxygen 98.6 1.9E-07 6.6E-12 95.3 11.5 37 44-80 20-57 (407)
72 3fmw_A Oxygenase; mithramycin, 98.5 5.7E-08 1.9E-12 103.4 6.5 36 45-80 47-83 (570)
73 1k0i_A P-hydroxybenzoate hydro 98.5 4E-08 1.4E-12 99.9 5.0 34 47-80 2-36 (394)
74 2bry_A NEDD9 interacting prote 98.5 5.7E-08 1.9E-12 101.8 5.2 36 45-80 90-126 (497)
75 2qa2_A CABE, polyketide oxygen 98.5 2.5E-07 8.5E-12 97.0 9.9 37 44-80 9-46 (499)
76 2x3n_A Probable FAD-dependent 98.5 3E-07 1E-11 93.6 10.2 35 46-80 5-40 (399)
77 1mo9_A ORF3; nucleotide bindin 98.5 1.2E-06 4.3E-11 92.3 14.8 66 218-293 261-327 (523)
78 4ap3_A Steroid monooxygenase; 98.5 2E-07 6.8E-12 98.7 8.4 36 45-80 19-55 (549)
79 2vou_A 2,6-dihydroxypyridine h 98.5 7.7E-07 2.6E-11 90.4 12.6 35 46-80 4-39 (397)
80 2gv8_A Monooxygenase; FMO, FAD 98.5 3.5E-07 1.2E-11 94.5 9.6 36 45-80 4-42 (447)
81 2zbw_A Thioredoxin reductase; 98.5 2.9E-07 9.9E-12 91.1 8.6 36 45-80 3-39 (335)
82 3itj_A Thioredoxin reductase 1 98.5 2.6E-07 8.9E-12 91.4 8.0 56 223-288 220-276 (338)
83 3urh_A Dihydrolipoyl dehydroge 98.5 3.3E-07 1.1E-11 96.0 9.1 36 45-80 23-59 (491)
84 3ab1_A Ferredoxin--NADP reduct 98.4 3.4E-07 1.2E-11 91.7 8.7 36 45-80 12-48 (360)
85 3gwf_A Cyclohexanone monooxyge 98.4 3.8E-07 1.3E-11 96.4 9.3 35 46-80 7-43 (540)
86 3kkj_A Amine oxidase, flavin-c 98.4 9E-08 3.1E-12 91.4 4.1 34 47-80 2-36 (336)
87 3l8k_A Dihydrolipoyl dehydroge 98.4 6.9E-07 2.4E-11 92.9 10.8 36 45-80 2-38 (466)
88 3r9u_A Thioredoxin reductase; 98.4 3.3E-06 1.1E-10 82.5 14.5 58 221-288 192-249 (315)
89 4gcm_A TRXR, thioredoxin reduc 98.4 1.6E-07 5.3E-12 92.2 4.8 34 46-79 5-39 (312)
90 3lzw_A Ferredoxin--NADP reduct 98.4 3.4E-07 1.2E-11 90.3 7.3 34 47-80 7-41 (332)
91 1w4x_A Phenylacetone monooxyge 98.4 6.5E-07 2.2E-11 94.9 9.7 36 45-80 14-50 (542)
92 3d1c_A Flavin-containing putat 98.4 5.2E-07 1.8E-11 90.6 8.4 33 47-79 4-38 (369)
93 3lxd_A FAD-dependent pyridine 98.4 6.9E-07 2.4E-11 91.4 9.0 61 220-294 202-262 (415)
94 4a5l_A Thioredoxin reductase; 98.3 1.7E-07 5.7E-12 91.9 3.3 36 44-79 1-37 (314)
95 3c96_A Flavin-containing monoo 98.3 2.8E-06 9.7E-11 86.6 12.5 35 46-80 3-39 (410)
96 4gut_A Lysine-specific histone 98.3 2.1E-06 7.2E-11 94.1 12.1 36 46-81 335-371 (776)
97 3uox_A Otemo; baeyer-villiger 98.3 9.9E-07 3.4E-11 93.3 9.1 36 45-80 7-43 (545)
98 2r0c_A REBC; flavin adenine di 98.3 1.4E-06 4.7E-11 92.5 10.2 35 46-80 25-60 (549)
99 3s5w_A L-ornithine 5-monooxyge 98.3 1.9E-06 6.4E-11 89.5 10.9 35 46-80 29-69 (463)
100 3lov_A Protoporphyrinogen oxid 98.3 2E-06 6.7E-11 89.6 10.9 35 47-81 4-41 (475)
101 2xve_A Flavin-containing monoo 98.3 1.6E-06 5.5E-11 90.0 10.1 33 48-80 3-42 (464)
102 2q0l_A TRXR, thioredoxin reduc 98.2 2.7E-06 9.1E-11 83.2 9.2 31 48-78 2-34 (311)
103 3fg2_P Putative rubredoxin red 98.2 3.1E-06 1.1E-10 86.1 9.8 62 219-294 191-252 (404)
104 2dkh_A 3-hydroxybenzoate hydro 98.2 3.4E-06 1.2E-10 91.1 10.5 37 44-80 29-67 (639)
105 2bcg_G Secretory pathway GDP d 98.2 7.6E-07 2.6E-11 92.2 4.9 40 44-83 8-48 (453)
106 3fpz_A Thiazole biosynthetic e 98.2 5.9E-07 2E-11 88.7 3.7 36 45-80 63-101 (326)
107 4b1b_A TRXR, thioredoxin reduc 98.2 6.3E-07 2.1E-11 94.3 3.4 34 47-80 42-76 (542)
108 4gde_A UDP-galactopyranose mut 98.1 7.8E-07 2.7E-11 93.6 3.3 37 46-82 9-47 (513)
109 3k7m_X 6-hydroxy-L-nicotine ox 98.1 1.4E-06 4.9E-11 89.4 3.5 33 48-80 2-35 (431)
110 3qfa_A Thioredoxin reductase 1 98.0 2.1E-06 7.3E-11 90.4 4.5 45 35-79 20-65 (519)
111 3o0h_A Glutathione reductase; 98.0 1.3E-06 4.5E-11 91.2 2.7 33 46-78 25-58 (484)
112 2pyx_A Tryptophan halogenase; 98.0 1.3E-05 4.5E-10 84.5 10.3 35 46-80 6-53 (526)
113 1c0p_A D-amino acid oxidase; a 98.0 2.6E-06 8.7E-11 85.4 4.3 37 44-80 3-40 (363)
114 3lad_A Dihydrolipoamide dehydr 98.0 2.3E-06 8E-11 89.1 3.5 35 46-80 2-37 (476)
115 4dna_A Probable glutathione re 98.0 2.2E-06 7.6E-11 88.9 3.2 33 46-78 4-37 (463)
116 3ic9_A Dihydrolipoamide dehydr 98.0 1.9E-06 6.5E-11 90.1 2.3 33 47-79 8-41 (492)
117 1hyu_A AHPF, alkyl hydroperoxi 98.0 1.4E-05 4.8E-10 84.1 8.7 33 45-77 210-243 (521)
118 2weu_A Tryptophan 5-halogenase 98.0 3.9E-05 1.3E-09 80.6 12.1 34 47-80 2-39 (511)
119 3hdq_A UDP-galactopyranose mut 97.9 4.9E-06 1.7E-10 83.9 4.7 38 44-81 26-64 (397)
120 3cgb_A Pyridine nucleotide-dis 97.9 3.1E-05 1.1E-09 80.6 10.9 34 47-80 36-72 (480)
121 1v0j_A UDP-galactopyranose mut 97.9 5.2E-06 1.8E-10 84.3 4.8 39 44-82 4-44 (399)
122 3dk9_A Grase, GR, glutathione 97.9 2.3E-06 7.9E-11 89.2 1.9 35 45-79 18-53 (478)
123 1i8t_A UDP-galactopyranose mut 97.9 6E-06 2.1E-10 82.8 4.5 35 47-81 1-36 (367)
124 2r9z_A Glutathione amide reduc 97.9 3.8E-06 1.3E-10 87.1 2.8 35 45-79 2-37 (463)
125 1ges_A Glutathione reductase; 97.9 3.7E-06 1.3E-10 86.9 2.7 35 45-79 2-37 (450)
126 1zk7_A HGII, reductase, mercur 97.9 4.6E-06 1.6E-10 86.7 3.3 35 45-79 2-37 (467)
127 3g3e_A D-amino-acid oxidase; F 97.9 5.2E-06 1.8E-10 82.7 3.5 32 49-80 2-40 (351)
128 1s3e_A Amine oxidase [flavin-c 97.9 5.8E-06 2E-10 87.1 3.9 37 45-81 2-39 (520)
129 2xdo_A TETX2 protein; tetracyc 97.9 7.5E-06 2.6E-10 83.1 4.3 37 44-80 23-60 (398)
130 2jae_A L-amino acid oxidase; o 97.9 8.2E-06 2.8E-10 85.2 4.5 39 45-83 9-48 (489)
131 2hqm_A GR, grase, glutathione 97.8 4.5E-06 1.5E-10 87.0 2.4 34 46-79 10-44 (479)
132 2b9w_A Putative aminooxidase; 97.8 9E-06 3.1E-10 83.2 4.6 38 45-82 4-43 (424)
133 3iwa_A FAD-dependent pyridine 97.8 5E-05 1.7E-09 78.9 10.2 34 47-80 3-39 (472)
134 3dgz_A Thioredoxin reductase 2 97.8 6.5E-06 2.2E-10 86.0 3.5 36 45-80 4-40 (488)
135 1d5t_A Guanine nucleotide diss 97.8 9.2E-06 3.1E-10 83.4 4.5 40 44-83 3-43 (433)
136 2ivd_A PPO, PPOX, protoporphyr 97.8 7.9E-06 2.7E-10 85.0 4.0 39 44-82 13-52 (478)
137 4b63_A L-ornithine N5 monooxyg 97.8 7.2E-06 2.5E-10 85.8 3.7 36 45-80 37-73 (501)
138 3i6d_A Protoporphyrinogen oxid 97.8 6.3E-06 2.2E-10 85.5 2.8 35 47-81 5-46 (470)
139 3ics_A Coenzyme A-disulfide re 97.8 5.1E-05 1.8E-09 81.1 10.0 35 46-80 35-72 (588)
140 2e1m_A L-glutamate oxidase; L- 97.8 1.2E-05 4.2E-10 80.3 4.4 36 45-80 42-79 (376)
141 1rsg_A FMS1 protein; FAD bindi 97.8 7.7E-06 2.6E-10 86.1 3.0 37 46-82 7-45 (516)
142 3dgh_A TRXR-1, thioredoxin red 97.8 1.2E-05 4.2E-10 83.8 4.4 35 45-79 7-42 (483)
143 1onf_A GR, grase, glutathione 97.8 8.6E-06 2.9E-10 85.3 3.1 33 47-79 2-35 (500)
144 1y56_A Hypothetical protein PH 97.8 5.3E-05 1.8E-09 79.1 8.7 34 47-80 108-141 (493)
145 3alj_A 2-methyl-3-hydroxypyrid 97.7 1.3E-05 4.6E-10 80.6 4.0 35 47-81 11-46 (379)
146 1sez_A Protoporphyrinogen oxid 97.7 1.5E-05 5.2E-10 83.5 4.3 39 44-82 10-49 (504)
147 2yg5_A Putrescine oxidase; oxi 97.7 1E-05 3.4E-10 83.7 2.9 37 46-82 4-41 (453)
148 1ojt_A Surface protein; redox- 97.7 9.6E-06 3.3E-10 84.5 2.8 37 44-80 3-40 (482)
149 3nks_A Protoporphyrinogen oxid 97.7 1.5E-05 5E-10 83.0 4.1 34 48-81 3-39 (477)
150 3oc4_A Oxidoreductase, pyridin 97.7 0.00011 3.7E-09 75.9 10.6 33 48-80 3-38 (452)
151 1nhp_A NADH peroxidase; oxidor 97.7 9.4E-05 3.2E-09 76.2 10.0 33 48-80 1-36 (447)
152 2vvm_A Monoamine oxidase N; FA 97.7 1.4E-05 4.8E-10 83.6 3.5 37 46-82 38-75 (495)
153 1v59_A Dihydrolipoamide dehydr 97.7 1E-05 3.6E-10 84.2 2.3 36 45-80 3-39 (478)
154 2q7v_A Thioredoxin reductase; 97.7 1.5E-05 5.1E-10 78.4 3.2 34 45-78 6-40 (325)
155 2qae_A Lipoamide, dihydrolipoy 97.7 1.7E-05 5.7E-10 82.4 3.6 34 47-80 2-36 (468)
156 1lvl_A Dihydrolipoamide dehydr 97.7 1.3E-05 4.4E-10 83.0 2.7 33 46-78 4-37 (458)
157 2yqu_A 2-oxoglutarate dehydrog 97.7 1.9E-05 6.5E-10 81.6 3.5 34 47-80 1-35 (455)
158 3fbs_A Oxidoreductase; structu 97.6 2.3E-05 7.8E-10 75.7 3.4 34 47-80 2-36 (297)
159 3ihm_A Styrene monooxygenase A 97.6 1.8E-05 6.3E-10 81.1 2.7 33 47-79 22-55 (430)
160 2wpf_A Trypanothione reductase 97.6 1.6E-05 5.4E-10 83.2 2.3 35 44-78 4-40 (495)
161 1dxl_A Dihydrolipoamide dehydr 97.6 2.7E-05 9.1E-10 80.9 4.0 36 45-80 4-40 (470)
162 2eq6_A Pyruvate dehydrogenase 97.6 1.8E-05 6.1E-10 82.1 2.5 33 47-79 6-39 (464)
163 1zmd_A Dihydrolipoyl dehydroge 97.6 2.1E-05 7.3E-10 81.7 3.1 35 46-80 5-40 (474)
164 2ywl_A Thioredoxin reductase r 97.6 2.6E-05 8.9E-10 69.5 3.3 32 48-79 2-34 (180)
165 1ebd_A E3BD, dihydrolipoamide 97.6 2.2E-05 7.4E-10 81.2 3.1 32 47-78 3-35 (455)
166 2bi7_A UDP-galactopyranose mut 97.6 3.7E-05 1.3E-09 77.6 4.7 35 47-81 3-38 (384)
167 4dsg_A UDP-galactopyranose mut 97.6 3.3E-05 1.1E-09 80.5 4.4 37 45-81 7-45 (484)
168 3klj_A NAD(FAD)-dependent dehy 97.6 0.00017 5.7E-09 72.7 9.3 34 47-80 9-43 (385)
169 1fec_A Trypanothione reductase 97.6 2.1E-05 7.3E-10 82.1 2.6 32 46-77 2-35 (490)
170 2a8x_A Dihydrolipoyl dehydroge 97.6 2.2E-05 7.5E-10 81.4 2.4 32 47-78 3-35 (464)
171 2iid_A L-amino-acid oxidase; f 97.5 4.2E-05 1.4E-09 80.0 4.3 37 45-81 31-68 (498)
172 3h8l_A NADH oxidase; membrane 97.5 0.00016 5.5E-09 73.5 8.6 32 49-80 3-38 (409)
173 3g5s_A Methylenetetrahydrofola 97.5 4.4E-05 1.5E-09 75.5 3.5 33 48-80 2-35 (443)
174 3ntd_A FAD-dependent pyridine 97.5 0.0002 7E-09 76.0 9.1 33 48-80 2-37 (565)
175 4eqs_A Coenzyme A disulfide re 97.5 0.00021 7.1E-09 73.4 8.8 31 50-80 3-36 (437)
176 1trb_A Thioredoxin reductase; 97.5 2.9E-05 9.8E-10 76.0 2.2 33 46-78 4-37 (320)
177 1fl2_A Alkyl hydroperoxide red 97.5 5.3E-05 1.8E-09 73.7 3.5 31 47-77 1-32 (310)
178 2a87_A TRXR, TR, thioredoxin r 97.5 4.1E-05 1.4E-09 75.6 2.7 34 45-78 12-46 (335)
179 3k30_A Histamine dehydrogenase 97.4 8.3E-05 2.8E-09 81.0 4.9 37 44-80 388-425 (690)
180 2vdc_G Glutamate synthase [NAD 97.4 0.0001 3.5E-09 76.0 4.9 35 46-80 121-156 (456)
181 1b37_A Protein (polyamine oxid 97.4 7.2E-05 2.5E-09 77.7 3.7 36 46-81 3-40 (472)
182 4hb9_A Similarities with proba 97.3 9.7E-05 3.3E-09 74.8 4.0 32 49-80 3-35 (412)
183 1vdc_A NTR, NADPH dependent th 97.3 6.4E-05 2.2E-09 74.0 2.3 31 47-77 8-39 (333)
184 1vg0_A RAB proteins geranylger 97.3 0.00013 4.4E-09 77.5 4.7 41 44-84 5-46 (650)
185 1xdi_A RV3303C-LPDA; reductase 97.3 7.8E-05 2.7E-09 78.0 3.0 33 47-79 2-38 (499)
186 2aqj_A Tryptophan halogenase, 97.3 0.00011 3.8E-09 77.6 3.9 36 46-81 4-43 (538)
187 2v3a_A Rubredoxin reductase; a 97.3 0.00012 4.3E-09 73.6 4.0 61 218-293 193-253 (384)
188 1q1r_A Putidaredoxin reductase 97.2 0.00015 5.1E-09 74.3 4.0 61 220-294 199-261 (431)
189 2x8g_A Thioredoxin glutathione 97.2 0.00012 4E-09 78.5 3.4 34 45-78 105-139 (598)
190 3c4a_A Probable tryptophan hyd 97.2 0.00016 5.5E-09 72.7 3.6 32 49-80 2-36 (381)
191 2z3y_A Lysine-specific histone 97.2 0.00022 7.7E-09 77.1 5.0 37 45-81 105-142 (662)
192 2e4g_A Tryptophan halogenase; 97.2 0.0002 7E-09 75.7 4.3 35 46-80 24-62 (550)
193 2v3a_A Rubredoxin reductase; a 97.1 0.0017 5.9E-08 65.2 10.4 33 48-80 146-179 (384)
194 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00028 9.4E-09 76.6 4.6 37 45-81 371-408 (671)
195 1o94_A Tmadh, trimethylamine d 97.1 0.00027 9.2E-09 77.4 4.5 36 45-80 387-423 (729)
196 1xhc_A NADH oxidase /nitrite r 97.1 0.00025 8.5E-09 70.9 3.8 33 48-81 9-42 (367)
197 2bc0_A NADH oxidase; flavoprot 97.1 0.00032 1.1E-08 73.1 4.4 34 47-80 35-72 (490)
198 2xag_A Lysine-specific histone 97.0 0.00036 1.2E-08 77.0 4.8 38 45-82 276-314 (852)
199 1pn0_A Phenol 2-monooxygenase; 97.0 0.00023 7.9E-09 77.0 3.2 34 47-80 8-47 (665)
200 2gag_A Heterotetrameric sarcos 97.0 0.00026 8.8E-09 79.9 3.7 34 47-80 128-162 (965)
201 3ab1_A Ferredoxin--NADP reduct 97.0 0.0026 8.7E-08 63.2 10.5 58 224-291 214-271 (360)
202 2gqw_A Ferredoxin reductase; f 97.0 0.00038 1.3E-08 70.7 3.7 35 46-80 6-43 (408)
203 1trb_A Thioredoxin reductase; 97.0 0.0031 1.1E-07 61.3 10.1 56 223-288 195-252 (320)
204 2cdu_A NADPH oxidase; flavoenz 96.9 0.00038 1.3E-08 71.8 3.5 33 48-80 1-36 (452)
205 1m6i_A Programmed cell death p 96.9 0.00041 1.4E-08 72.3 3.5 61 219-294 233-293 (493)
206 1fl2_A Alkyl hydroperoxide red 96.9 0.004 1.4E-07 60.2 10.4 54 225-288 193-247 (310)
207 3kd9_A Coenzyme A disulfide re 96.9 0.0005 1.7E-08 70.7 3.9 35 47-81 3-40 (449)
208 2eq6_A Pyruvate dehydrogenase 96.8 0.003 1E-07 65.2 8.7 33 48-80 170-203 (464)
209 1gte_A Dihydropyrimidine dehyd 96.7 0.00063 2.2E-08 77.3 3.7 35 46-80 186-222 (1025)
210 1cjc_A Protein (adrenodoxin re 96.7 0.00078 2.7E-08 69.4 4.0 36 46-81 5-43 (460)
211 2q0l_A TRXR, thioredoxin reduc 96.7 0.0097 3.3E-07 57.4 11.4 56 224-289 191-247 (311)
212 3h28_A Sulfide-quinone reducta 96.6 0.00091 3.1E-08 68.4 3.7 34 48-81 3-39 (430)
213 3sx6_A Sulfide-quinone reducta 96.6 0.0012 4E-08 67.7 4.5 35 47-81 4-42 (437)
214 1lqt_A FPRA; NADP+ derivative, 96.6 0.001 3.5E-08 68.5 3.4 35 47-81 3-45 (456)
215 3ef6_A Toluene 1,2-dioxygenase 96.5 0.0045 1.5E-07 62.8 7.8 56 224-294 197-252 (410)
216 1q1r_A Putidaredoxin reductase 96.4 0.021 7E-07 58.2 12.3 33 48-80 150-183 (431)
217 3ef6_A Toluene 1,2-dioxygenase 96.4 0.0014 4.8E-08 66.5 3.4 34 48-81 3-39 (410)
218 3s5w_A L-ornithine 5-monooxyge 96.4 0.027 9.2E-07 57.8 13.0 34 47-80 227-263 (463)
219 1v59_A Dihydrolipoamide dehydr 96.4 0.0059 2E-07 63.2 8.0 33 48-80 184-217 (478)
220 2yqu_A 2-oxoglutarate dehydrog 96.3 0.019 6.4E-07 59.0 11.2 33 48-80 168-201 (455)
221 4g6h_A Rotenone-insensitive NA 96.3 0.0023 7.8E-08 66.7 4.1 35 46-80 41-76 (502)
222 3ayj_A Pro-enzyme of L-phenyla 96.3 0.0017 5.7E-08 69.9 3.1 33 47-79 56-97 (721)
223 1ebd_A E3BD, dihydrolipoamide 96.3 0.008 2.7E-07 61.8 8.2 33 48-80 171-204 (455)
224 1hyu_A AHPF, alkyl hydroperoxi 96.3 0.017 5.8E-07 60.5 10.6 54 225-288 404-458 (521)
225 3ic9_A Dihydrolipoamide dehydr 96.2 0.014 4.8E-07 60.6 9.6 33 48-80 175-208 (492)
226 2zbw_A Thioredoxin reductase; 96.2 0.023 7.7E-07 55.5 10.6 33 48-80 153-186 (335)
227 3vrd_B FCCB subunit, flavocyto 96.2 0.0026 8.9E-08 64.2 3.7 32 50-81 5-39 (401)
228 2q7v_A Thioredoxin reductase; 96.1 0.03 1E-06 54.3 11.2 53 224-287 200-253 (325)
229 1vdc_A NTR, NADPH dependent th 96.1 0.035 1.2E-06 54.0 11.6 57 224-288 207-264 (333)
230 2qae_A Lipoamide, dihydrolipoy 96.1 0.015 5E-07 60.0 9.1 33 48-80 175-208 (468)
231 3urh_A Dihydrolipoyl dehydroge 96.0 0.019 6.4E-07 59.6 9.4 33 48-80 199-232 (491)
232 3cgb_A Pyridine nucleotide-dis 96.0 0.0088 3E-07 61.9 6.7 33 48-80 187-220 (480)
233 2hqm_A GR, grase, glutathione 96.0 0.0092 3.2E-07 61.8 6.7 32 49-80 187-219 (479)
234 2r9z_A Glutathione amide reduc 95.9 0.02 6.8E-07 58.9 8.9 32 49-80 168-200 (463)
235 3iwa_A FAD-dependent pyridine 95.7 0.094 3.2E-06 53.9 13.2 55 224-293 214-268 (472)
236 1zmd_A Dihydrolipoyl dehydroge 95.7 0.05 1.7E-06 56.1 11.1 33 48-80 179-212 (474)
237 3hyw_A Sulfide-quinone reducta 95.6 0.0061 2.1E-07 62.2 3.6 57 221-293 209-265 (430)
238 1xdi_A RV3303C-LPDA; reductase 95.6 0.018 6.2E-07 59.9 7.2 33 48-80 183-216 (499)
239 1dxl_A Dihydrolipoamide dehydr 95.5 0.045 1.5E-06 56.3 9.9 33 48-80 178-211 (470)
240 3lad_A Dihydrolipoamide dehydr 95.5 0.1 3.4E-06 53.8 12.4 33 48-80 181-214 (476)
241 3lzw_A Ferredoxin--NADP reduct 95.4 0.039 1.3E-06 53.5 8.6 33 48-80 155-188 (332)
242 3ntd_A FAD-dependent pyridine 95.4 0.062 2.1E-06 56.7 10.5 32 49-80 153-185 (565)
243 3o0h_A Glutathione reductase; 95.3 0.022 7.6E-07 58.9 6.6 33 48-80 192-225 (484)
244 3ics_A Coenzyme A-disulfide re 95.2 0.1 3.5E-06 55.4 11.5 32 49-80 189-221 (588)
245 3oc4_A Oxidoreductase, pyridin 94.9 0.079 2.7E-06 54.2 9.4 33 48-80 148-181 (452)
246 3dgh_A TRXR-1, thioredoxin red 94.9 0.12 4E-06 53.4 10.7 55 224-288 239-294 (483)
247 3dgz_A Thioredoxin reductase 2 94.8 0.13 4.3E-06 53.2 10.7 31 49-79 187-218 (488)
248 4dna_A Probable glutathione re 94.6 0.041 1.4E-06 56.5 6.3 33 48-80 171-204 (463)
249 1nhp_A NADH peroxidase; oxidor 93.1 0.048 1.6E-06 55.7 3.4 34 47-80 149-183 (447)
250 4gcm_A TRXR, thioredoxin reduc 92.9 0.068 2.3E-06 51.5 4.0 32 49-80 147-179 (312)
251 2gag_A Heterotetrameric sarcos 92.9 0.32 1.1E-05 54.7 10.0 57 225-291 329-391 (965)
252 3fwz_A Inner membrane protein 92.5 0.088 3E-06 44.1 3.7 32 48-79 8-40 (140)
253 2g1u_A Hypothetical protein TM 92.5 0.074 2.5E-06 45.5 3.2 32 48-79 20-52 (155)
254 3k30_A Histamine dehydrogenase 92.4 0.3 1E-05 52.9 8.7 32 49-80 525-559 (690)
255 3klj_A NAD(FAD)-dependent dehy 92.4 0.074 2.5E-06 53.2 3.6 33 49-81 148-181 (385)
256 1lvl_A Dihydrolipoamide dehydr 91.8 0.096 3.3E-06 53.7 3.7 33 48-80 172-205 (458)
257 3llv_A Exopolyphosphatase-rela 91.8 0.093 3.2E-06 43.9 3.0 31 49-79 8-39 (141)
258 4a5l_A Thioredoxin reductase; 91.7 0.12 4E-06 49.7 4.0 33 48-80 153-186 (314)
259 1lss_A TRK system potassium up 91.4 0.12 4E-06 43.0 3.2 31 49-79 6-37 (140)
260 1xhc_A NADH oxidase /nitrite r 91.1 0.11 3.8E-06 51.5 3.2 33 48-80 144-177 (367)
261 1id1_A Putative potassium chan 90.6 0.14 4.7E-06 43.6 3.0 31 49-79 5-36 (153)
262 1ges_A Glutathione reductase; 90.1 0.16 5.6E-06 51.8 3.6 33 48-80 168-201 (450)
263 3ic5_A Putative saccharopine d 89.5 0.16 5.5E-06 40.6 2.3 31 49-79 7-39 (118)
264 2gqw_A Ferredoxin reductase; f 89.2 0.21 7.1E-06 50.3 3.4 33 48-80 146-179 (408)
265 2hmt_A YUAA protein; RCK, KTN, 88.8 0.19 6.5E-06 41.8 2.4 31 49-79 8-39 (144)
266 3d1c_A Flavin-containing putat 88.6 0.24 8E-06 48.8 3.3 32 49-80 168-200 (369)
267 2bc0_A NADH oxidase; flavoprot 88.5 0.25 8.6E-06 51.0 3.6 33 48-80 195-228 (490)
268 1ojt_A Surface protein; redox- 88.4 0.26 9E-06 50.7 3.6 33 48-80 186-219 (482)
269 2gv8_A Monooxygenase; FMO, FAD 88.3 0.28 9.5E-06 50.0 3.7 33 48-80 213-247 (447)
270 2xve_A Flavin-containing monoo 88.0 0.32 1.1E-05 49.9 3.9 32 49-80 199-231 (464)
271 1f0y_A HCDH, L-3-hydroxyacyl-C 87.9 0.35 1.2E-05 46.3 3.9 31 49-79 17-48 (302)
272 1onf_A GR, grase, glutathione 87.9 0.34 1.2E-05 50.2 4.1 33 48-80 177-210 (500)
273 2a8x_A Dihydrolipoyl dehydroge 87.8 0.3 1E-05 50.0 3.6 33 48-80 172-205 (464)
274 4eqs_A Coenzyme A disulfide re 87.6 0.32 1.1E-05 49.4 3.6 33 49-81 149-182 (437)
275 2bcg_G Secretory pathway GDP d 87.5 0.45 1.5E-05 48.5 4.7 62 206-282 236-299 (453)
276 3gwf_A Cyclohexanone monooxyge 87.5 0.34 1.2E-05 50.7 3.8 33 48-80 179-212 (540)
277 3hn2_A 2-dehydropantoate 2-red 87.3 0.42 1.4E-05 46.1 4.0 31 49-79 4-35 (312)
278 3uox_A Otemo; baeyer-villiger 87.3 0.34 1.2E-05 50.7 3.6 33 48-80 186-219 (545)
279 3kd9_A Coenzyme A disulfide re 87.1 0.33 1.1E-05 49.4 3.4 32 49-80 150-182 (449)
280 3ado_A Lambda-crystallin; L-gu 87.0 0.31 1E-05 47.0 2.8 31 49-79 8-39 (319)
281 3i83_A 2-dehydropantoate 2-red 86.7 0.4 1.4E-05 46.4 3.6 31 49-79 4-35 (320)
282 2cdu_A NADPH oxidase; flavoenz 86.6 0.42 1.4E-05 48.7 3.9 32 49-80 151-183 (452)
283 4ap3_A Steroid monooxygenase; 86.4 0.37 1.2E-05 50.6 3.3 33 48-80 192-225 (549)
284 2a87_A TRXR, TR, thioredoxin r 86.3 0.47 1.6E-05 46.0 3.9 33 48-80 156-189 (335)
285 3l4b_C TRKA K+ channel protien 86.3 0.27 9.2E-06 44.6 2.0 30 50-79 3-33 (218)
286 3dfz_A SIRC, precorrin-2 dehyd 86.0 0.49 1.7E-05 43.0 3.6 30 49-78 33-63 (223)
287 1zk7_A HGII, reductase, mercur 85.9 0.46 1.6E-05 48.6 3.7 33 48-80 177-210 (467)
288 3cty_A Thioredoxin reductase; 85.4 0.55 1.9E-05 45.1 3.8 33 48-80 156-189 (319)
289 3oj0_A Glutr, glutamyl-tRNA re 85.2 0.53 1.8E-05 39.4 3.1 31 49-79 23-54 (144)
290 3itj_A Thioredoxin reductase 1 84.9 0.61 2.1E-05 45.0 3.9 33 48-80 174-207 (338)
291 3l8k_A Dihydrolipoyl dehydroge 84.9 0.55 1.9E-05 48.0 3.7 33 48-80 173-206 (466)
292 2a9f_A Putative malic enzyme ( 84.8 0.85 2.9E-05 44.9 4.8 33 47-79 188-222 (398)
293 3fg2_P Putative rubredoxin red 84.5 0.57 1.9E-05 46.9 3.6 34 48-81 143-177 (404)
294 3dk9_A Grase, GR, glutathione 84.5 0.58 2E-05 48.0 3.7 33 48-80 188-221 (478)
295 1d5t_A Guanine nucleotide diss 84.5 0.44 1.5E-05 48.2 2.8 63 205-282 227-289 (433)
296 1jw9_B Molybdopterin biosynthe 84.4 0.61 2.1E-05 43.3 3.5 33 48-80 32-66 (249)
297 3lxd_A FAD-dependent pyridine 84.3 0.61 2.1E-05 46.8 3.7 34 48-81 153-187 (415)
298 3fbs_A Oxidoreductase; structu 84.1 0.89 3E-05 42.8 4.6 32 48-80 142-174 (297)
299 1kyq_A Met8P, siroheme biosynt 84.0 0.46 1.6E-05 44.7 2.4 31 49-79 15-46 (274)
300 2x8g_A Thioredoxin glutathione 83.9 0.54 1.8E-05 49.8 3.2 30 49-78 288-318 (598)
301 3g17_A Similar to 2-dehydropan 83.6 0.48 1.6E-05 45.2 2.5 31 49-79 4-35 (294)
302 2raf_A Putative dinucleotide-b 83.5 0.78 2.7E-05 41.2 3.7 32 49-80 21-53 (209)
303 1vg0_A RAB proteins geranylger 83.4 1.4 4.9E-05 46.6 6.1 65 204-281 370-435 (650)
304 3ghy_A Ketopantoate reductase 83.0 0.64 2.2E-05 45.2 3.2 30 49-78 5-35 (335)
305 1ks9_A KPA reductase;, 2-dehyd 83.0 0.76 2.6E-05 43.4 3.6 30 50-79 3-33 (291)
306 4dio_A NAD(P) transhydrogenase 82.8 0.78 2.7E-05 45.6 3.6 33 48-80 191-224 (405)
307 4b1b_A TRXR, thioredoxin reduc 82.5 0.68 2.3E-05 48.3 3.3 32 49-80 225-257 (542)
308 3c85_A Putative glutathione-re 82.4 0.63 2.2E-05 40.7 2.6 31 49-79 41-73 (183)
309 4e12_A Diketoreductase; oxidor 82.4 0.83 2.8E-05 43.2 3.6 31 49-79 6-37 (283)
310 4g65_A TRK system potassium up 82.2 0.58 2E-05 47.8 2.5 30 50-79 6-36 (461)
311 3rui_A Ubiquitin-like modifier 81.9 1.2 4.2E-05 43.1 4.5 36 47-82 34-71 (340)
312 3p2y_A Alanine dehydrogenase/p 81.8 0.84 2.9E-05 45.0 3.4 33 48-80 185-218 (381)
313 1mo9_A ORF3; nucleotide bindin 81.7 0.84 2.9E-05 47.4 3.6 33 48-80 215-248 (523)
314 3f8d_A Thioredoxin reductase ( 81.5 0.93 3.2E-05 43.2 3.7 34 48-81 155-189 (323)
315 1lld_A L-lactate dehydrogenase 81.2 0.93 3.2E-05 43.6 3.5 31 49-79 9-42 (319)
316 2ewd_A Lactate dehydrogenase,; 80.6 1.3 4.3E-05 42.7 4.2 31 49-79 6-38 (317)
317 2ew2_A 2-dehydropantoate 2-red 80.5 0.97 3.3E-05 43.2 3.4 31 49-79 5-36 (316)
318 3qfa_A Thioredoxin reductase 1 80.4 0.86 2.9E-05 47.3 3.1 30 49-78 212-242 (519)
319 3l9w_A Glutathione-regulated p 80.3 0.77 2.6E-05 46.1 2.6 32 49-80 6-38 (413)
320 3r9u_A Thioredoxin reductase; 79.7 1.2 4.2E-05 42.2 3.8 34 48-81 148-182 (315)
321 1vl6_A Malate oxidoreductase; 79.6 1 3.5E-05 44.3 3.2 34 47-80 192-227 (388)
322 1x13_A NAD(P) transhydrogenase 79.6 1.1 3.7E-05 44.8 3.4 32 48-79 173-205 (401)
323 3hwr_A 2-dehydropantoate 2-red 79.5 1 3.5E-05 43.4 3.2 29 49-78 21-50 (318)
324 3ond_A Adenosylhomocysteinase; 79.3 1.1 3.7E-05 45.6 3.4 31 49-79 267-298 (488)
325 2y0c_A BCEC, UDP-glucose dehyd 79.2 1.1 3.7E-05 46.0 3.4 32 48-79 9-41 (478)
326 3lk7_A UDP-N-acetylmuramoylala 79.1 1.4 4.6E-05 44.9 4.1 31 49-79 11-42 (451)
327 1nyt_A Shikimate 5-dehydrogena 79.1 1.2 4E-05 41.9 3.4 31 49-79 121-152 (271)
328 4a9w_A Monooxygenase; baeyer-v 79.1 1.3 4.4E-05 42.9 3.8 31 48-79 164-195 (357)
329 2dpo_A L-gulonate 3-dehydrogen 78.9 1 3.4E-05 43.5 2.8 31 49-79 8-39 (319)
330 1zud_1 Adenylyltransferase THI 78.7 1.6 5.4E-05 40.5 4.0 33 48-80 29-63 (251)
331 3h8v_A Ubiquitin-like modifier 78.3 1.4 4.9E-05 41.7 3.6 35 47-81 36-72 (292)
332 1zcj_A Peroxisomal bifunctiona 78.3 1.3 4.5E-05 45.1 3.7 31 49-79 39-70 (463)
333 2aef_A Calcium-gated potassium 78.2 0.95 3.2E-05 41.3 2.4 30 49-79 11-41 (234)
334 1cjc_A Protein (adrenodoxin re 78.0 1.4 4.9E-05 44.8 3.9 54 224-285 269-335 (460)
335 1mv8_A GMD, GDP-mannose 6-dehy 78.0 1.5 5.1E-05 44.4 4.0 30 50-79 3-33 (436)
336 1txg_A Glycerol-3-phosphate de 77.7 1.3 4.5E-05 42.8 3.3 28 50-77 3-31 (335)
337 1pjc_A Protein (L-alanine dehy 77.7 1.2 4.3E-05 43.7 3.2 32 48-79 168-200 (361)
338 1l7d_A Nicotinamide nucleotide 77.6 1.4 4.9E-05 43.7 3.6 33 48-80 173-206 (384)
339 1bg6_A N-(1-D-carboxylethyl)-L 77.6 1.4 4.7E-05 43.1 3.5 31 49-79 6-37 (359)
340 2vdc_G Glutamate synthase [NAD 77.6 1.2 4.3E-05 45.2 3.2 33 48-80 265-299 (456)
341 2eez_A Alanine dehydrogenase; 77.5 1.3 4.3E-05 43.8 3.2 32 48-79 167-199 (369)
342 1pzg_A LDH, lactate dehydrogen 77.4 1.5 5.2E-05 42.5 3.6 31 49-79 11-43 (331)
343 3qha_A Putative oxidoreductase 77.4 2.1 7.1E-05 40.7 4.6 33 48-80 16-49 (296)
344 1h6d_A Precursor form of gluco 76.9 1.1 3.9E-05 45.2 2.7 35 45-79 81-119 (433)
345 3k6j_A Protein F01G10.3, confi 76.7 2.1 7.2E-05 43.4 4.6 31 49-79 56-87 (460)
346 1jay_A Coenzyme F420H2:NADP+ o 76.7 1.6 5.6E-05 38.9 3.4 30 50-79 3-34 (212)
347 3phh_A Shikimate dehydrogenase 76.5 1.7 5.9E-05 40.6 3.6 33 48-80 119-152 (269)
348 2vvm_A Monoamine oxidase N; FA 76.5 2.3 7.9E-05 43.6 5.0 64 208-286 251-315 (495)
349 3k96_A Glycerol-3-phosphate de 76.3 1.4 4.9E-05 43.2 3.1 31 49-79 31-62 (356)
350 4g6h_A Rotenone-insensitive NA 76.2 1.4 4.7E-05 45.5 3.2 33 49-81 219-266 (502)
351 2v6b_A L-LDH, L-lactate dehydr 76.1 1.6 5.4E-05 41.8 3.4 30 50-79 3-35 (304)
352 3vh1_A Ubiquitin-like modifier 76.0 2.4 8.4E-05 44.2 4.9 34 48-81 328-363 (598)
353 3ego_A Probable 2-dehydropanto 75.9 1.8 6.2E-05 41.4 3.7 31 49-79 4-34 (307)
354 2vhw_A Alanine dehydrogenase; 75.9 1.5 5.1E-05 43.4 3.2 32 48-79 169-201 (377)
355 3gg2_A Sugar dehydrogenase, UD 75.8 1.6 5.3E-05 44.4 3.4 31 49-79 4-35 (450)
356 3nks_A Protoporphyrinogen oxid 75.8 0.87 3E-05 46.5 1.5 66 208-288 230-295 (477)
357 2hjr_A Malate dehydrogenase; m 75.4 1.8 6.3E-05 41.8 3.6 31 49-79 16-48 (328)
358 1evy_A Glycerol-3-phosphate de 75.3 1.5 5E-05 43.2 3.0 31 49-79 17-48 (366)
359 2x5o_A UDP-N-acetylmuramoylala 75.0 1.2 4.2E-05 45.0 2.3 31 50-80 8-39 (439)
360 1o94_A Tmadh, trimethylamine d 75.0 1.6 5.4E-05 47.5 3.3 31 49-79 530-563 (729)
361 3doj_A AT3G25530, dehydrogenas 74.9 2.2 7.5E-05 40.8 4.0 32 48-79 22-54 (310)
362 2pv7_A T-protein [includes: ch 74.6 2 6.9E-05 40.9 3.7 31 49-79 23-55 (298)
363 3pdu_A 3-hydroxyisobutyrate de 74.6 2.2 7.4E-05 40.3 3.8 31 50-80 4-35 (287)
364 2egg_A AROE, shikimate 5-dehyd 74.5 2.1 7.1E-05 40.8 3.7 31 49-79 143-175 (297)
365 2vns_A Metalloreductase steap3 74.2 1.9 6.4E-05 38.9 3.1 31 49-79 30-61 (215)
366 1nvt_A Shikimate 5'-dehydrogen 74.2 2.1 7E-05 40.5 3.6 30 49-79 130-160 (287)
367 1z82_A Glycerol-3-phosphate de 73.9 2 6.8E-05 41.6 3.5 33 47-79 14-47 (335)
368 3gvp_A Adenosylhomocysteinase 73.9 1.7 6E-05 43.3 3.0 32 48-79 221-253 (435)
369 4gsl_A Ubiquitin-like modifier 73.7 2.2 7.6E-05 44.5 3.9 35 47-81 326-362 (615)
370 3h5n_A MCCB protein; ubiquitin 73.7 1.9 6.5E-05 42.2 3.3 34 47-80 118-153 (353)
371 3dtt_A NADP oxidoreductase; st 73.4 1.8 6E-05 39.9 2.8 32 48-79 20-52 (245)
372 3vtf_A UDP-glucose 6-dehydroge 73.4 2.2 7.5E-05 43.0 3.6 33 47-79 21-54 (444)
373 2pq4_B Periplasmic nitrate red 73.3 3 0.0001 25.3 2.9 16 1-16 3-18 (35)
374 1a5z_A L-lactate dehydrogenase 73.1 2.1 7.1E-05 41.2 3.4 30 50-79 3-35 (319)
375 3d4o_A Dipicolinate synthase s 73.0 2 6.9E-05 40.8 3.2 31 49-79 157-188 (293)
376 1leh_A Leucine dehydrogenase; 72.9 2.1 7.2E-05 42.0 3.4 30 49-78 175-205 (364)
377 2h78_A Hibadh, 3-hydroxyisobut 72.9 2.3 7.9E-05 40.4 3.6 31 49-79 5-36 (302)
378 3pef_A 6-phosphogluconate dehy 72.9 2.2 7.5E-05 40.3 3.4 31 50-80 4-35 (287)
379 2ywl_A Thioredoxin reductase r 72.9 2.2 7.6E-05 36.8 3.2 55 220-293 64-118 (180)
380 2uyy_A N-PAC protein; long-cha 72.7 2.9 9.8E-05 40.0 4.3 32 48-79 31-63 (316)
381 3cky_A 2-hydroxymethyl glutara 72.5 2.5 8.7E-05 40.0 3.8 31 49-79 6-37 (301)
382 1p77_A Shikimate 5-dehydrogena 72.3 1.5 5.3E-05 41.1 2.1 31 49-79 121-152 (272)
383 3jyo_A Quinate/shikimate dehyd 72.1 2.3 8E-05 40.1 3.4 32 48-79 128-161 (283)
384 1w4x_A Phenylacetone monooxyge 72.1 2.1 7.1E-05 44.7 3.3 34 48-81 187-221 (542)
385 3mog_A Probable 3-hydroxybutyr 72.0 2.1 7.1E-05 43.9 3.2 31 49-79 7-38 (483)
386 1t2d_A LDH-P, L-lactate dehydr 72.0 2.9 9.9E-05 40.3 4.1 31 49-79 6-38 (322)
387 4dll_A 2-hydroxy-3-oxopropiona 71.9 2.9 9.8E-05 40.2 4.1 31 49-79 33-64 (320)
388 3g0o_A 3-hydroxyisobutyrate de 71.8 2.1 7.1E-05 40.8 3.0 31 49-79 9-40 (303)
389 2rir_A Dipicolinate synthase, 71.8 2.2 7.6E-05 40.6 3.2 31 49-79 159-190 (300)
390 3fbt_A Chorismate mutase and s 71.7 2.7 9.4E-05 39.6 3.7 32 48-79 123-156 (282)
391 3tnl_A Shikimate dehydrogenase 71.5 2.3 7.8E-05 40.8 3.2 31 48-78 155-187 (315)
392 3n58_A Adenosylhomocysteinase; 71.1 2.2 7.6E-05 42.7 3.0 31 49-79 249-280 (464)
393 1hyh_A L-hicdh, L-2-hydroxyiso 71.1 2.4 8.3E-05 40.5 3.3 30 50-79 4-36 (309)
394 4ffl_A PYLC; amino acid, biosy 70.9 2.9 0.0001 40.9 3.9 31 50-80 4-35 (363)
395 1gte_A Dihydropyrimidine dehyd 70.9 2.3 7.8E-05 48.1 3.5 31 49-79 334-366 (1025)
396 2hk9_A Shikimate dehydrogenase 70.9 2.6 8.8E-05 39.6 3.4 31 49-79 131-162 (275)
397 1m6i_A Programmed cell death p 70.7 4.1 0.00014 41.8 5.2 37 45-81 9-48 (493)
398 3ce6_A Adenosylhomocysteinase; 70.7 2.2 7.6E-05 43.7 3.0 31 49-79 276-307 (494)
399 2gf2_A Hibadh, 3-hydroxyisobut 70.6 3.2 0.00011 39.2 4.0 30 50-79 3-33 (296)
400 3i6d_A Protoporphyrinogen oxid 70.6 5 0.00017 40.4 5.8 47 227-288 248-294 (470)
401 3don_A Shikimate dehydrogenase 70.5 2.4 8.1E-05 39.9 3.0 31 49-79 119-151 (277)
402 2f1k_A Prephenate dehydrogenas 70.5 2.6 9E-05 39.4 3.4 30 50-79 3-33 (279)
403 1yj8_A Glycerol-3-phosphate de 70.5 2.1 7.2E-05 42.2 2.8 32 49-80 23-62 (375)
404 4a7p_A UDP-glucose dehydrogena 70.4 2.7 9.3E-05 42.5 3.6 34 47-80 8-42 (446)
405 3tl2_A Malate dehydrogenase; c 70.2 2.7 9.1E-05 40.4 3.3 30 49-78 10-41 (315)
406 1vpd_A Tartronate semialdehyde 70.2 3.2 0.00011 39.2 4.0 31 49-79 7-38 (299)
407 1lu9_A Methylene tetrahydromet 70.2 2.5 8.5E-05 39.9 3.1 31 49-79 121-153 (287)
408 1yqg_A Pyrroline-5-carboxylate 70.2 2.7 9.3E-05 38.9 3.4 30 50-79 3-34 (263)
409 3ius_A Uncharacterized conserv 70.1 3 0.0001 39.0 3.6 30 50-79 8-38 (286)
410 1x0v_A GPD-C, GPDH-C, glycerol 69.9 2 6.9E-05 41.9 2.5 32 49-80 10-49 (354)
411 4huj_A Uncharacterized protein 69.9 1.6 5.4E-05 39.5 1.6 31 49-79 25-57 (220)
412 2wpf_A Trypanothione reductase 69.6 2.7 9.4E-05 43.2 3.5 33 48-80 192-228 (495)
413 1c1d_A L-phenylalanine dehydro 69.5 2.8 9.7E-05 40.8 3.4 31 48-78 176-207 (355)
414 1fec_A Trypanothione reductase 69.4 2.6 9E-05 43.2 3.4 33 48-80 188-224 (490)
415 3o38_A Short chain dehydrogena 69.1 2.7 9.1E-05 39.0 3.1 31 49-79 24-57 (266)
416 3gpi_A NAD-dependent epimerase 69.1 2.8 9.5E-05 39.3 3.2 31 50-80 6-37 (286)
417 1guz_A Malate dehydrogenase; o 68.9 3.2 0.00011 39.7 3.6 30 50-79 3-35 (310)
418 3u62_A Shikimate dehydrogenase 68.9 2.7 9.4E-05 38.9 3.0 31 49-79 110-142 (253)
419 3ew7_A LMO0794 protein; Q8Y8U8 68.9 3.1 0.00011 37.0 3.4 30 50-79 3-34 (221)
420 3dfu_A Uncharacterized protein 68.9 2 7E-05 39.1 2.1 29 49-77 8-37 (232)
421 4ezb_A Uncharacterized conserv 68.9 2.9 9.9E-05 40.2 3.3 31 49-79 26-58 (317)
422 1y8q_A Ubiquitin-like 1 activa 68.5 2.9 9.9E-05 40.7 3.2 34 47-80 36-71 (346)
423 3pwz_A Shikimate dehydrogenase 68.4 3.2 0.00011 38.9 3.4 32 48-79 121-154 (272)
424 1pjq_A CYSG, siroheme synthase 68.3 2.6 8.8E-05 42.9 2.9 30 49-78 14-44 (457)
425 3ggo_A Prephenate dehydrogenas 68.2 3.1 0.0001 40.0 3.3 31 49-79 35-68 (314)
426 2g5c_A Prephenate dehydrogenas 68.2 3.1 0.00011 39.0 3.3 30 50-79 4-36 (281)
427 3o8q_A Shikimate 5-dehydrogena 68.1 3.4 0.00012 38.9 3.5 32 48-79 127-160 (281)
428 1ur5_A Malate dehydrogenase; o 68.0 3.5 0.00012 39.5 3.6 31 49-79 4-36 (309)
429 4gx0_A TRKA domain protein; me 67.8 3 0.0001 43.7 3.4 33 48-80 349-382 (565)
430 1tt5_B Ubiquitin-activating en 67.7 3 0.0001 42.0 3.2 34 47-80 40-75 (434)
431 3pid_A UDP-glucose 6-dehydroge 67.7 3.1 0.0001 41.8 3.3 31 49-79 38-68 (432)
432 3t4e_A Quinate/shikimate dehyd 67.6 3.1 0.00011 39.8 3.2 31 48-78 149-181 (312)
433 3ojo_A CAP5O; rossmann fold, c 67.4 3.9 0.00013 41.1 4.0 31 49-79 13-44 (431)
434 3e8x_A Putative NAD-dependent 67.3 3.3 0.00011 37.5 3.2 31 49-79 23-55 (236)
435 3qsg_A NAD-binding phosphogluc 67.2 3.4 0.00011 39.6 3.4 31 48-78 25-57 (312)
436 3eag_A UDP-N-acetylmuramate:L- 67.0 3.9 0.00013 39.4 3.8 32 49-80 6-39 (326)
437 3c7a_A Octopine dehydrogenase; 66.9 3.1 0.00011 41.5 3.2 28 49-76 4-33 (404)
438 3dqp_A Oxidoreductase YLBE; al 66.9 3.8 0.00013 36.5 3.5 31 50-80 3-35 (219)
439 1hdo_A Biliverdin IX beta redu 66.9 3.4 0.00012 36.2 3.2 31 50-80 6-38 (206)
440 2wtb_A MFP2, fatty acid multif 66.8 3.3 0.00011 44.8 3.5 31 49-79 314-345 (725)
441 1dlj_A UDP-glucose dehydrogena 66.8 3.6 0.00012 41.0 3.6 30 50-79 3-32 (402)
442 1npy_A Hypothetical shikimate 66.6 4.1 0.00014 38.1 3.7 32 48-79 120-153 (271)
443 3h2s_A Putative NADH-flavin re 66.5 3.6 0.00012 36.8 3.2 30 50-79 3-34 (224)
444 3zwc_A Peroxisomal bifunctiona 66.3 3.3 0.00011 44.8 3.4 32 48-79 317-349 (742)
445 3c24_A Putative oxidoreductase 66.3 3.5 0.00012 38.8 3.3 31 49-79 13-45 (286)
446 1gpj_A Glutamyl-tRNA reductase 66.3 3.5 0.00012 41.2 3.4 31 49-79 169-201 (404)
447 3pqe_A L-LDH, L-lactate dehydr 66.1 3.7 0.00013 39.6 3.4 30 49-78 7-39 (326)
448 1edz_A 5,10-methylenetetrahydr 66.0 5.2 0.00018 38.3 4.3 32 47-78 177-210 (320)
449 3nv9_A Malic enzyme; rossmann 65.8 4.1 0.00014 40.8 3.7 33 48-80 220-256 (487)
450 4e21_A 6-phosphogluconate dehy 65.8 3.8 0.00013 40.1 3.5 32 48-79 23-55 (358)
451 2izz_A Pyrroline-5-carboxylate 65.7 3.5 0.00012 39.7 3.2 31 49-79 24-59 (322)
452 3h9u_A Adenosylhomocysteinase; 65.6 3.7 0.00013 41.0 3.4 31 49-79 213-244 (436)
453 2pd4_A Enoyl-[acyl-carrier-pro 65.4 5.1 0.00017 37.3 4.2 30 50-79 9-42 (275)
454 3g79_A NDP-N-acetyl-D-galactos 65.3 4.8 0.00016 41.1 4.2 32 49-80 20-54 (478)
455 2dbq_A Glyoxylate reductase; D 64.9 4.3 0.00015 39.3 3.6 31 49-79 152-183 (334)
456 1oju_A MDH, malate dehydrogena 64.9 4.1 0.00014 38.6 3.4 30 50-79 3-35 (294)
457 2d5c_A AROE, shikimate 5-dehyd 64.8 3.8 0.00013 38.0 3.2 31 49-79 118-149 (263)
458 3l6d_A Putative oxidoreductase 64.8 5 0.00017 38.2 4.0 32 48-79 10-42 (306)
459 2i6t_A Ubiquitin-conjugating e 64.7 4.2 0.00014 38.8 3.5 31 49-79 16-49 (303)
460 3gvi_A Malate dehydrogenase; N 64.3 4.5 0.00016 38.9 3.6 31 49-79 9-41 (324)
461 2zyd_A 6-phosphogluconate dehy 64.3 4.5 0.00015 41.4 3.8 33 47-79 15-48 (480)
462 3ktd_A Prephenate dehydrogenas 64.2 3.5 0.00012 40.0 2.8 31 49-79 10-41 (341)
463 1pqw_A Polyketide synthase; ro 64.0 3.4 0.00012 36.3 2.5 31 49-79 41-73 (198)
464 1lqt_A FPRA; NADP+ derivative, 63.9 4.8 0.00016 40.8 3.9 50 225-285 265-328 (456)
465 1ff9_A Saccharopine reductase; 63.8 5.1 0.00018 40.6 4.1 31 49-79 5-36 (450)
466 2rcy_A Pyrroline carboxylate r 63.8 3.9 0.00013 37.8 3.0 31 49-79 6-41 (262)
467 2dkn_A 3-alpha-hydroxysteroid 63.5 4.5 0.00015 36.8 3.4 30 50-79 4-35 (255)
468 3ldh_A Lactate dehydrogenase; 63.5 4.4 0.00015 39.1 3.3 31 49-79 23-56 (330)
469 3d1l_A Putative NADP oxidoredu 63.4 3.8 0.00013 38.0 2.9 31 49-79 12-44 (266)
470 1y8q_B Anthracycline-, ubiquit 63.3 3.8 0.00013 43.2 3.0 34 48-81 18-53 (640)
471 1i36_A Conserved hypothetical 63.3 3.8 0.00013 37.9 2.9 28 50-77 3-31 (264)
472 2yjz_A Metalloreductase steap4 67.0 1.5 5.2E-05 39.0 0.0 31 49-79 21-52 (201)
473 4g65_A TRK system potassium up 62.9 4.5 0.00015 41.1 3.5 31 49-79 237-267 (461)
474 3k7m_X 6-hydroxy-L-nicotine ox 62.8 6 0.0002 39.5 4.4 45 221-281 213-257 (431)
475 2dvm_A Malic enzyme, 439AA lon 62.8 3.4 0.00012 41.5 2.5 28 49-76 188-219 (439)
476 1zej_A HBD-9, 3-hydroxyacyl-CO 62.7 4.6 0.00016 38.3 3.3 31 49-79 14-44 (293)
477 2e4g_A Tryptophan halogenase; 62.7 5.1 0.00017 41.7 4.0 52 218-283 200-252 (550)
478 2pgd_A 6-phosphogluconate dehy 62.6 4.6 0.00016 41.3 3.5 31 49-79 4-35 (482)
479 2d0i_A Dehydrogenase; structur 62.5 5.7 0.0002 38.4 4.0 31 49-79 148-179 (333)
480 1np3_A Ketol-acid reductoisome 62.4 4.7 0.00016 39.1 3.4 31 49-79 18-49 (338)
481 1lnq_A MTHK channels, potassiu 62.4 3.8 0.00013 39.6 2.8 31 49-80 117-148 (336)
482 3p7m_A Malate dehydrogenase; p 62.3 5.2 0.00018 38.4 3.6 31 49-79 7-39 (321)
483 3vku_A L-LDH, L-lactate dehydr 62.1 4.8 0.00016 38.7 3.4 30 49-78 11-43 (326)
484 2o7s_A DHQ-SDH PR, bifunctiona 62.1 3.4 0.00012 42.8 2.4 31 49-79 366-397 (523)
485 1pgj_A 6PGDH, 6-PGDH, 6-phosph 62.1 4.4 0.00015 41.4 3.3 31 49-79 3-34 (478)
486 2h7i_A Enoyl-[acyl-carrier-pro 62.1 4.9 0.00017 37.3 3.4 30 50-79 10-43 (269)
487 3ba1_A HPPR, hydroxyphenylpyru 61.9 5.8 0.0002 38.3 3.9 32 49-80 166-198 (333)
488 3r6d_A NAD-dependent epimerase 61.6 4.8 0.00016 35.9 3.1 30 50-79 8-40 (221)
489 1yb4_A Tartronic semialdehyde 61.4 4.8 0.00016 37.9 3.2 28 49-76 5-33 (295)
490 3nep_X Malate dehydrogenase; h 61.4 5.5 0.00019 38.1 3.6 30 50-79 3-35 (314)
491 1b37_A Protein (polyamine oxid 61.2 9.6 0.00033 38.6 5.7 41 226-281 228-268 (472)
492 2wyu_A Enoyl-[acyl carrier pro 61.1 5.6 0.00019 36.7 3.6 30 50-79 11-44 (261)
493 3qvo_A NMRA family protein; st 61.1 4.7 0.00016 36.5 3.0 32 49-80 25-59 (236)
494 3k31_A Enoyl-(acyl-carrier-pro 60.8 5.7 0.00019 37.5 3.6 30 50-79 33-66 (296)
495 2ivd_A PPO, PPOX, protoporphyr 60.7 7.2 0.00025 39.5 4.7 50 226-288 249-299 (478)
496 2gcg_A Glyoxylate reductase/hy 60.7 5.8 0.0002 38.3 3.7 31 49-79 157-188 (330)
497 3d64_A Adenosylhomocysteinase; 60.6 5.6 0.00019 40.6 3.7 31 49-79 279-310 (494)
498 4aj2_A L-lactate dehydrogenase 60.6 6.4 0.00022 38.0 3.9 31 48-78 20-53 (331)
499 1wdk_A Fatty oxidation complex 60.5 3.8 0.00013 44.3 2.5 31 49-79 316-347 (715)
500 2p4q_A 6-phosphogluconate dehy 60.4 5.9 0.0002 40.7 3.9 32 48-79 11-43 (497)
No 1
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=3.4e-76 Score=626.69 Aligned_cols=492 Identities=43% Similarity=0.784 Sum_probs=380.4
Q ss_pred CCccccccccCCCCCCccEEEECCCcchHHHHHhhhcCCeEEEEcCCCCCCCCCCcccchhhHhhhcCCC-CCCCCcccc
Q 009241 32 NYSFMRNATAAKPVSYYDYIVIGGGTAGCPLAASLSQNASVLLLERGDSPYGNPNITNSGSFSAELADLS-PTSPSQRFI 110 (539)
Q Consensus 32 ~~~~~~~~~~~~~~~~~DviVVGsG~aG~~aA~~La~G~~VlvlEkG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 110 (539)
.++|+.++....+..+|||||||||++|+++|.+|+||.+|||||+|+.....+....+..|...+.+.. |.+.+|...
T Consensus 11 ~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~~ 90 (536)
T 1ju2_A 11 YLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFV 90 (536)
T ss_dssp GGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEEE
T ss_pred cCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCcccc
Confidence 4467777666666678999999999999999999999889999999986433344444444544333222 566677777
Q ss_pred CCCceeecCcccccchhhhccceeecCChhhHhcCC--CCHHHHhhhhhhhhcccccCCCCchhHHHHHHHHHHcCCCCC
Q 009241 111 SEDGVVSTRARVLGGGTCINAGFYTRAEPYYAREAG--WDGRLVNESYQWVEKKVVFRPPMQRWQSALRDGLVEVGVLPY 188 (539)
Q Consensus 111 ~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~g--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 188 (539)
.++...+.+|+++||+|.+|++.+.|+.+.+++..| |+++++.+||+++|+.+.+.+...++...+.++++++|+.+.
T Consensus 91 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~ 170 (536)
T 1ju2_A 91 SEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPN 170 (536)
T ss_dssp CTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCE
T ss_pred CCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCC
Confidence 778888999999999999999999999998888878 999999999999999877777777888889999999998755
Q ss_pred CCCccCCCCceeeeeeeecCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEec
Q 009241 189 NGFTYDHLYGTKIGGTIIDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLR 268 (539)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~ 268 (539)
++...+...++..+...+..+|.|++...+++.+++.|++|++++.|++|++++++ ..+++||++.+.+|+.++++++
T Consensus 171 ~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~--~~~~~GV~~~~~~g~~~~~~v~ 248 (536)
T 1ju2_A 171 HGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAP--GLTATGVIYRDSNGTPHQAFVR 248 (536)
T ss_dssp EEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSS--SCBEEEEEEECTTSCEEEEEEE
T ss_pred CCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCC--CCEEEEEEEEeCCCceEEEEec
Confidence 44333334444444444456788887766777778899999999999999998631 1389999998756765555322
Q ss_pred cCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccCccCCCCeEEeeCCCccchhhHHhhhccccch
Q 009241 269 NGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGS 348 (539)
Q Consensus 269 ~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (539)
++|+||||||+|+||+||++||||++++|+.+||+++.++|.||+||+||+...+.+..+.+......+..++.. .
T Consensus 249 --a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~~--~ 324 (536)
T 1ju2_A 249 --SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN--D 324 (536)
T ss_dssp --EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEECS--S
T ss_pred --cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHHH--H
Confidence 468999999999999999999999999999999999999999999999999877776655432211111111100 1
Q ss_pred hhhccCCCC---------CCCCCCCCCCCcceEEEEeecCcCcceEEEe-cCCCCCCCCeeecCCCCChHHHHHHHHHHH
Q 009241 349 YIEGASGVN---------FAGGSPSPRPYRGGFIFEKIIGPVSTGHLEL-RTRNPNDTPSVTFNYFKEPEDLQRCVQGIS 418 (539)
Q Consensus 349 ~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~ 418 (539)
|.....|+. +..............+...+..|.|||+|+| +++||.+.|.|+++|+.++.|++.+.++++
T Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~ 404 (536)
T 1ju2_A 325 FYQCSFSSLPFTTPPFGFFPSSSYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMK 404 (536)
T ss_dssp EEEEEEEECCCSSCCBTTBSSSCCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCChhhheeecCcccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHH
Confidence 111111100 0000000011123355667789999999999 889999999999999999999999999999
Q ss_pred HHHHHHccccccccccccchhHHhhhhccCCCCC-----CCCCCCCCHHHHHHHHHhccCCCcccccccccccccCCCCc
Q 009241 419 TIEKIIESKSFSKFKYDNMSVETLLNMTASMPLN-----LLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYK 493 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg~VvD~~~r 493 (539)
.+++++++.+++.+...+.. ..|+. ..|...++++++++|++....+.+|++||||||+|||++||
T Consensus 405 ~~~~i~~~~~~~~~~~~~~~---------~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lr 475 (536)
T 1ju2_A 405 KIGELLSTDALKPYKVEDLP---------GVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFR 475 (536)
T ss_dssp HHHHHHTSGGGGGGCSSCCS---------TTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSB
T ss_pred HHHHHHcCccchhhhccccc---------cCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCe
Confidence 99999999888776543210 00110 02333568999999999999999999999999999999999
Q ss_pred EeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhc
Q 009241 494 VLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS 538 (539)
Q Consensus 494 v~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~~~~~~ 538 (539)
|||++||||||+||||+.+++||++|+||+|+|+|+.|+++++++
T Consensus 476 V~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~ 520 (536)
T 1ju2_A 476 VTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSAS 520 (536)
T ss_dssp BTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999998865
No 2
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=6e-75 Score=616.10 Aligned_cols=463 Identities=25% Similarity=0.353 Sum_probs=352.8
Q ss_pred CccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCCCCCCcccchhhHhhh----cCCCCCCCCccccCCCceeecCc
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAEL----ADLSPTSPSQRFISEDGVVSTRA 120 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 120 (539)
+|||||||+|.+||++|.+|++ +.+|||||+|+..........+..+.... .+|.|.+.+|....++.+.+.+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999999 79999999998754333333333333222 36889999999999999999999
Q ss_pred ccccchhhhccceeecCChhhHhc-------CCCCHHHHhhhhhhhhccccc-------------------------CCC
Q 009241 121 RVLGGGTCINAGFYTRAEPYYARE-------AGWDGRLVNESYQWVEKKVVF-------------------------RPP 168 (539)
Q Consensus 121 ~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~~-------------------------~~~ 168 (539)
++|||+|.+|+|.|.|+.+.+++. .||+|+++.+||++.|+.... .+.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 999999999999999999876542 579999999999998875421 012
Q ss_pred CchhHHHHHHHHHHc--CCCCCCCCccCCCCceeeeeeee---cCCCcccchhh-hhh-hcCCCCcEEEcCcEEEEEEec
Q 009241 169 MQRWQSALRDGLVEV--GVLPYNGFTYDHLYGTKIGGTII---DQNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILFR 241 (539)
Q Consensus 169 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~---~~~g~r~~~~~-~l~-~~~~~gv~i~~~t~V~~l~~~ 241 (539)
..+....+.++++++ |++...++.. +...|..++ ..+|.|+++.. |+. ...+.|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n~----~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMGT----GHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGGG----SCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCCC----CCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 245667888888888 8764322211 122222221 13788887754 665 667889999999999999998
Q ss_pred ---CCCCCCCeEEEEEEEeCCC-CeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccC
Q 009241 242 ---NKGKARPVAHGVVFRDATD-AEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGM 317 (539)
Q Consensus 242 ---~~~~~~~~v~gV~~~~~~g-~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l 317 (539)
++ .++++||++.+.+| +.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+|.||+||
T Consensus 238 ~~~~g---~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NL 310 (566)
T 3fim_B 238 GTTNG---LPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNL 310 (566)
T ss_dssp EEETT---EEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSB
T ss_pred cCCCC---CCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhh
Confidence 22 02899999987556 666666 56999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEeeCCCccchh------------hHHhh----hc-c----ccchhhhccC-------------CCCCCCCCC
Q 009241 318 SDNPMNAIFVPSPVPVEVS------------LIQVV----GI-T----QFGSYIEGAS-------------GVNFAGGSP 363 (539)
Q Consensus 318 ~dh~~~~~~~~~~~~~~~~------------~~~~~----~~-~----~~~~~~~~~~-------------g~~~~~~~~ 363 (539)
+||+...+.+..+.+.... ..++. +. . ....|.+... +. ..++.+
T Consensus 311 qDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~-~~pd~~ 389 (566)
T 3fim_B 311 SDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGP-NSAHWE 389 (566)
T ss_dssp BCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSEEEEECCCTTCGGGGTSCCCSSST-TSCSEE
T ss_pred hcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhheeeeccccchhhhhhhccccccC-CCCCEE
Confidence 9999877665443321110 01110 00 0 0011211100 00 000000
Q ss_pred -------------CCCCCcceEEEEeecCcCcceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHcccccc
Q 009241 364 -------------SPRPYRGGFIFEKIIGPVSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 430 (539)
Q Consensus 364 -------------~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 430 (539)
....-...++...+.+|.|||+|+|+++||.+.|.|+++|+.++.|++.+.++++.+++++.+.+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~ 469 (566)
T 3fim_B 390 TIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWA 469 (566)
T ss_dssp EEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred EEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccC
Confidence 0001123345567789999999999999999999999999999999999999999999999988888
Q ss_pred ccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccccccc------cccCCCCcEeccCCceEee
Q 009241 431 KFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVVD 504 (539)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg------~VvD~~~rv~g~~nL~V~D 504 (539)
++...+.. |+ ....++++++++|++....+.+|++|||||| +|||+++||||++||||||
T Consensus 470 ~~~~~~~~-----------P~---~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvD 535 (566)
T 3fim_B 470 DFVIRPFD-----------PR---LRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVD 535 (566)
T ss_dssp TTEEEESS-----------GG---GSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECS
T ss_pred CccccccC-----------CC---cccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcc
Confidence 77643321 11 0235689999999999999999999999998 7999999999999999999
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHHHhh
Q 009241 505 GSTFYYSPGTNPQATVMMLGRYMGVRILSER 535 (539)
Q Consensus 505 aSv~P~~~~~nP~lti~ala~r~a~~i~~~~ 535 (539)
+||||+.+++||++|+||+|+|+||.|++++
T Consensus 536 aSv~P~~~~~n~~~~~~~iaekaAd~I~~~~ 566 (566)
T 3fim_B 536 GSILPFAPNAHTQGPIYLVGKQGADLIKADQ 566 (566)
T ss_dssp GGGCCSCCSSCTHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCCcCcHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999887653
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=6.2e-74 Score=608.90 Aligned_cols=469 Identities=23% Similarity=0.299 Sum_probs=347.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCC-CCCCcccchhhHhhh---cCCCCCCCCccccCCCceeec
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPY-GNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVVST 118 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 118 (539)
.++|||||||||.|||++|.||+| +.+|||||+|+... ..+....+..+...+ .+|.|.+.+|. ..++.+.+.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeecc
Confidence 457999999999999999999998 78999999998422 233344444443332 36778787775 577888999
Q ss_pred CcccccchhhhccceeecCChhhHhc------C-CCCHHHHhhhhhhhhcccc--------------------------c
Q 009241 119 RARVLGGGTCINAGFYTRAEPYYARE------A-GWDGRLVNESYQWVEKKVV--------------------------F 165 (539)
Q Consensus 119 ~g~~lGG~s~~~~~~~~r~~~~~~~~------~-gw~~~~~~~~~~~~~~~~~--------------------------~ 165 (539)
+|++|||+|.+|+|.|.|+.+.+++. . ||.|+++.+||++.|.... .
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~ 175 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGP 175 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBC
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecC
Confidence 99999999999999999999876653 3 8999999999999887531 0
Q ss_pred C---CCCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeee----cCCCcccchhh-hhh-hcCCCCcEEEcCcEEE
Q 009241 166 R---PPMQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTII----DQNSQRHTAAD-LLE-YANPSGLTVLLHASVH 236 (539)
Q Consensus 166 ~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~g~r~~~~~-~l~-~~~~~gv~i~~~t~V~ 236 (539)
. ....++.+.+.++++++|++...++. .+...|..++ ..+|.|+++.. |+. ..++.|++|++++.|+
T Consensus 176 ~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n----~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~ 251 (583)
T 3qvp_A 176 RDTGDDYSPIVKALMSAVEDRGVPTKKDFG----CGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVG 251 (583)
T ss_dssp CCCSSCBCTHHHHHHHHHHTTTCCBCCCTT----SSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEE
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCcCCCCC----CCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 0 11245678888999999987533221 1222222221 23578887654 664 6678899999999999
Q ss_pred EEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCcc
Q 009241 237 KILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQG 316 (539)
Q Consensus 237 ~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~ 316 (539)
+|++++++ ..++++||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|
T Consensus 252 rIl~d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~N 325 (583)
T 3qvp_A 252 KVLLSQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLN 325 (583)
T ss_dssp EEEEECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCC
T ss_pred EEEeccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccc
Confidence 99998421 013999999986578777776 56899999999999999999999999999999999999999 9999
Q ss_pred CccCCCCeEEeeCCCccc--------hhhHHhhh--------c--cccchhhhc--cCCCC-----------------CC
Q 009241 317 MSDNPMNAIFVPSPVPVE--------VSLIQVVG--------I--TQFGSYIEG--ASGVN-----------------FA 359 (539)
Q Consensus 317 l~dh~~~~~~~~~~~~~~--------~~~~~~~~--------~--~~~~~~~~~--~~g~~-----------------~~ 359 (539)
|+||+...+.+....+.. .......+ + ...+.|... ..+.. +.
T Consensus 326 LqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (583)
T 3qvp_A 326 LQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDWIVN 405 (583)
T ss_dssp BBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHhhhccchhhhcc
Confidence 999998877765442200 00000000 0 000001000 00000 00
Q ss_pred CCCCCCCC---C-cceEEEEeecCcCcceEEEecCCCCCCCCee-ecCCCCChHHHHHHHHHHHHHHHHHcccccccccc
Q 009241 360 GGSPSPRP---Y-RGGFIFEKIIGPVSTGHLELRTRNPNDTPSV-TFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKY 434 (539)
Q Consensus 360 ~~~~~~~~---~-~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (539)
........ + ....+......|.|||+|+|+++||.+.|.| +++|+.++.|++.+.++++.+++++++.+++++..
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~ 485 (583)
T 3qvp_A 406 HNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFA 485 (583)
T ss_dssp SCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEE
T ss_pred CCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhccc
Confidence 00000000 0 0112223347899999999999999999999 99999999999999999999999999887776654
Q ss_pred ccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccccccc-----cccCCCCcEeccCCceEeecccCC
Q 009241 435 DNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFY 509 (539)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg-----~VvD~~~rv~g~~nL~V~DaSv~P 509 (539)
.+.. |+..+ ...++++++++|++....+.+|++|||||| +|||++|||||++||||||+||||
T Consensus 486 ~~~~-----------pg~~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P 553 (583)
T 3qvp_A 486 GETI-----------PGDNL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPP 553 (583)
T ss_dssp EEEE-----------SGGGS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCS
T ss_pred cccC-----------CCccc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCCeEEeecccCC
Confidence 3321 21111 123689999999999999999999999998 799999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhhh
Q 009241 510 YSPGTNPQATVMMLGRYMGVRILSERLA 537 (539)
Q Consensus 510 ~~~~~nP~lti~ala~r~a~~i~~~~~~ 537 (539)
+.+++||++|+||+|+|+||.|++ ++.
T Consensus 554 ~~~~~n~~~t~~aiaeraAd~I~~-~~~ 580 (583)
T 3qvp_A 554 TQMSSHVMTVFYAMALKISDAILE-DYA 580 (583)
T ss_dssp SCCSSCSHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCCCcCcHHHHHHHHHHHHHHHHH-hhh
Confidence 999999999999999999996665 443
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.5e-71 Score=591.40 Aligned_cols=458 Identities=22% Similarity=0.305 Sum_probs=336.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEcCCCCCC-CCCCcccchhhHhhh---cCCCCCCCCccccCCCcee--
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPY-GNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVV-- 116 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 116 (539)
.++|||||||||.|||++|.+|+| + .+|||||+|+... ..+....+..+.... .+|.|.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 457999999999999999999999 6 7999999998632 112222232232221 13445443 2334444
Q ss_pred ----ecCcccccchhhhccceeecCChhhHhc------CCCCHHHHhhhhhhhhcccccC--------------------
Q 009241 117 ----STRARVLGGGTCINAGFYTRAEPYYARE------AGWDGRLVNESYQWVEKKVVFR-------------------- 166 (539)
Q Consensus 117 ----~~~g~~lGG~s~~~~~~~~r~~~~~~~~------~gw~~~~~~~~~~~~~~~~~~~-------------------- 166 (539)
+.+|+++||+|.+|+|.|.|+.+.+++. .+|.|+++.+||++.|......
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 8999999999999999999999877654 5799999999999987643211
Q ss_pred C-C---CchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeee---cCCCcccchhhhhhhcCCCCcEEEcCcEEEEEE
Q 009241 167 P-P---MQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTII---DQNSQRHTAADLLEYANPSGLTVLLHASVHKIL 239 (539)
Q Consensus 167 ~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~ 239 (539)
+ . ..++...+.++++++|+....+.. .+...|..+. ..+|.|.+...+ ...+.|++|++++.|++|+
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~ 233 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENIY----DGEMDGLTHCCDTIYRGQRSGSFLF--VKNKPNITIVPEVHSKRLI 233 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCCS----SSCCCEEEECEESEETTEECCGGGG--SSSCTTEEEECSEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCCC----CCCcCeEEeecceecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEE
Confidence 0 0 123566778888999986432221 1112221111 235777765444 3457899999999999999
Q ss_pred ecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccCcc
Q 009241 240 FRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSD 319 (539)
Q Consensus 240 ~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l~d 319 (539)
+++.+ .+++||++.+.+|+.+++. ++|+||||||+|+||+||++|||||+++|+++||+++.|+|.||+||||
T Consensus 234 ~~~~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 234 INEAD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EETTT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EeCCC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 98421 2999999987668777766 5689999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEeeCCCccch--h-----------hHHhh----hc-c----ccchhhhcc----------------CC--CCCC
Q 009241 320 NPMNAIFVPSPVPVEV--S-----------LIQVV----GI-T----QFGSYIEGA----------------SG--VNFA 359 (539)
Q Consensus 320 h~~~~~~~~~~~~~~~--~-----------~~~~~----~~-~----~~~~~~~~~----------------~g--~~~~ 359 (539)
|+...+.+..+.+... . ..++. +. . ....|.+.. .. ....
T Consensus 307 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (577)
T 3q9t_A 307 HPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSP 386 (577)
T ss_dssp CEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCT
T ss_pred CcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchhheeEEeecChhhhcchhhhhhhhccccccccCC
Confidence 9988777654433210 0 00000 00 0 000010000 00 0000
Q ss_pred CCCCC-------------------CCCCcceEEEEeecCcCcce-EEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHH
Q 009241 360 GGSPS-------------------PRPYRGGFIFEKIIGPVSTG-HLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIST 419 (539)
Q Consensus 360 ~~~~~-------------------~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~ 419 (539)
...+. ...-...++...+.+|.||| +|+|+++||.+.|.|+++|+.++.|++.+.++++.
T Consensus 387 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~ 466 (577)
T 3q9t_A 387 LGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRF 466 (577)
T ss_dssp TSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHH
T ss_pred CCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHH
Confidence 00000 00012334556778999999 99999999999999999999999999999999999
Q ss_pred HHHHH-ccccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccccccc-----cccCCCCc
Q 009241 420 IEKII-ESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYK 493 (539)
Q Consensus 420 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg-----~VvD~~~r 493 (539)
+++++ .+++++.+...+.. |+ ...++++++++|+|....+.+|++|||||| +|||++||
T Consensus 467 ~~~i~~~~~~~~~~~~~e~~-----------p~----~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lr 531 (577)
T 3q9t_A 467 SYDLLFKGEGFKDLVESEYP-----------WE----MPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLK 531 (577)
T ss_dssp HHHHHHHSTTGGGTEEEEES-----------SC----CCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCB
T ss_pred HHHHHHhChhhhhccccccC-----------CC----CCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCe
Confidence 99999 88888877654321 11 235789999999999999999999999999 59999999
Q ss_pred EeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Q 009241 494 VLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 534 (539)
Q Consensus 494 v~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~~ 534 (539)
|||++||||||+||||+.+++||++|+||+|+|+||.|+++
T Consensus 532 V~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 532 VHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp BTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999977654
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.7e-69 Score=576.68 Aligned_cols=459 Identities=24% Similarity=0.376 Sum_probs=342.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCCCCCCcccchhhHhh---hcCCCCCCCCccccCCCceeecCc
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAE---LADLSPTSPSQRFISEDGVVSTRA 120 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g 120 (539)
.+|||||||||++|+++|.||+| |.+|||||+|+.... +....+..+... ..+|.|.+.+|....++.+.+.+|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~-~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~rG 94 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTD-PDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWARG 94 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCC-GGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECCB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCC-cchhChhhHhhccCCccccCccccccCCCCCCeEeccCc
Confidence 47999999999999999999998 689999999986432 333333333221 225778888999999999999999
Q ss_pred ccccchhhhccceeecCChhhHhc-------CCCCHHHHhhhhhhhhcccccC----------------CCCchhHHHHH
Q 009241 121 RVLGGGTCINAGFYTRAEPYYARE-------AGWDGRLVNESYQWVEKKVVFR----------------PPMQRWQSALR 177 (539)
Q Consensus 121 ~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~ 177 (539)
++|||+|.+|++.+.|+.+.+|+. .+|+|+++.+||++.|...... ....++.+.+.
T Consensus 95 ~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~ 174 (526)
T 3t37_A 95 RLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAFI 174 (526)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHHH
T ss_pred cEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHHH
Confidence 999999999999999999987653 4699999999999998754321 12345677888
Q ss_pred HHHHHcCCCCCCCCccCCCCceeeeeeeecCCCcccchhh-hh-h-hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEE
Q 009241 178 DGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTAAD-LL-E-YANPSGLTVLLHASVHKILFRNKGKARPVAHGVV 254 (539)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~-~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~ 254 (539)
+.++++|+............++... ......|.+.+... ++ + ...+.|++|++++.|++|+++++ +++||+
T Consensus 175 ~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv~ 248 (526)
T 3t37_A 175 EAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSLE 248 (526)
T ss_dssp HHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEEE
T ss_pred HHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEEE
Confidence 8999999875433221111111111 11123455655543 33 3 45678999999999999999887 999999
Q ss_pred EEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccCccCCCCeEEe-eCCCcc
Q 009241 255 FRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFV-PSPVPV 333 (539)
Q Consensus 255 ~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l~dh~~~~~~~-~~~~~~ 333 (539)
+.+. +....+. +|+||||||+|+||+|||+||||++.++..+||+++.++|.||+||+||+.....+ ....+.
T Consensus 249 ~~~~-~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~ 322 (526)
T 3t37_A 249 VVGR-QGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV 322 (526)
T ss_dssp EEET-TEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC
T ss_pred EEec-CceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc
Confidence 9874 4344443 79999999999999999999999999999999999999999999999998654432 222221
Q ss_pred chhhHHh---hhccccchhhhcc-------CC--CCCCCCCCCCCCCcceEEEEeecCcCcceEEEecCCCCCCCCeeec
Q 009241 334 EVSLIQV---VGITQFGSYIEGA-------SG--VNFAGGSPSPRPYRGGFIFEKIIGPVSTGHLELRTRNPNDTPSVTF 401 (539)
Q Consensus 334 ~~~~~~~---~~~~~~~~~~~~~-------~g--~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~ 401 (539)
....... ..+.....+.... .+ .................+...+..|.|+|+|++.+.|+.+.|.|++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~ 402 (526)
T 3t37_A 323 PPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSESFPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDP 402 (526)
T ss_dssp CCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCTTSCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEEC
T ss_pred chHhhcchhhhhhhhcccccccCCcceeeecccccccccccccccCCcceeeeccccCccccCcceeccCCCccCceecc
Confidence 1110000 0000000000000 00 0000001111222334555667899999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHccccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccc
Q 009241 402 NYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGG 481 (539)
Q Consensus 402 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt 481 (539)
+|+.++.|++.+.++++.+++++....++.+...+ ..|....+++++++|++....+.+|++||
T Consensus 403 ~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~~pg~~~~~~~~~~~ir~~~~t~~H~~GT 466 (526)
T 3t37_A 403 AYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------LLPGTPNSAAEMDDFIARSVITHHHPCGT 466 (526)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------CSSCCCCSHHHHHHHHHHHEEECSCCBCT
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------cCCCCCCCHHHHHHHHHhcCccCcccCcc
Confidence 99999999999999999999999887777665433 12334568899999999999999999999
Q ss_pred cccc----cccCCCCcEeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHH
Q 009241 482 CQVG----KVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILS 533 (539)
Q Consensus 482 ~~mg----~VvD~~~rv~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~ 533 (539)
|||| +|||++|||||++|||||||||||+.+++||++||||||||+||+.-.
T Consensus 467 crMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 467 CRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp TCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 9999 699999999999999999999999999999999999999999997643
No 6
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7e-69 Score=575.58 Aligned_cols=471 Identities=23% Similarity=0.283 Sum_probs=345.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCCCCCCcc-cchhhHhhh---cCCCCCCCCccccCCCceeec
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNIT-NSGSFSAEL---ADLSPTSPSQRFISEDGVVST 118 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 118 (539)
..+|||||||+|.+|+++|.+|++ |.+|+|||+|+.....+... .+..+...+ .+|.|.+.+ ...++.+.+.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 357999999999999999999999 89999999998654333333 232222222 245555444 4567788999
Q ss_pred CcccccchhhhccceeecCChhhHhc-------CCCCHHHHhhhhhhhhccccc-----------C--------------
Q 009241 119 RARVLGGGTCINAGFYTRAEPYYARE-------AGWDGRLVNESYQWVEKKVVF-----------R-------------- 166 (539)
Q Consensus 119 ~g~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~~-----------~-------------- 166 (539)
+|++|||+|.+|+|.+.|+.+.+|+. .+|+|+++.+||+++|+.+.. .
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 99999999999999999999976653 479999999999999886542 1
Q ss_pred ----CCCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeeecCCCcccchhh-hhh-hcCCCCcEEEcCcEEEEEEe
Q 009241 167 ----PPMQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILF 240 (539)
Q Consensus 167 ----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~gv~i~~~t~V~~l~~ 240 (539)
....+..+.+.++++++|++...........++.........+|.|+++.. |+. .+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 022456788899999999875433221111122111111114678887754 664 66778999999999999999
Q ss_pred cCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccCccC
Q 009241 241 RNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDN 320 (539)
Q Consensus 241 ~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l~dh 320 (539)
++++ ...+++||++.+.+|+.+++. ++|+||||||+|+||+||++||||++++|+++||+++.++| ||+||+||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 7521 012899999985577766665 44999999999999999999999999999999999999999 99999999
Q ss_pred CCCeEEeeCCCccch---------hhHHhh----hc-----cccchhhhcc---CC-CC---------------CCCCCC
Q 009241 321 PMNAIFVPSPVPVEV---------SLIQVV----GI-----TQFGSYIEGA---SG-VN---------------FAGGSP 363 (539)
Q Consensus 321 ~~~~~~~~~~~~~~~---------~~~~~~----~~-----~~~~~~~~~~---~g-~~---------------~~~~~~ 363 (539)
+...+.+..+.+... ....+. ++ .....|.... .+ .. +.....
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (587)
T 1gpe_A 334 TTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDEDVA 413 (587)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSCCE
T ss_pred cccceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccccccceeeEeecccccccccccccccccHHHHhhhccCCCCc
Confidence 988776654432110 000000 00 0000111110 00 00 000000
Q ss_pred CCC----CCcceEEEEeecCcCcceEEEecCCCCCCCC-eeecCCCCChHHHHHHHHHHHHHHHHHccccccccccccch
Q 009241 364 SPR----PYRGGFIFEKIIGPVSTGHLELRTRNPNDTP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMS 438 (539)
Q Consensus 364 ~~~----~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (539)
... ......+...+..|.|+|+|+|+++||++.| .|+++|+.++.|++.+.++++.+++++++.+++.+...+..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 493 (587)
T 1gpe_A 414 FAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGETL 493 (587)
T ss_dssp EEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEEE
T ss_pred ceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcccccC
Confidence 000 0112344456778999999999999999999 99999999999999999999999999999888776543311
Q ss_pred hHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccccccc-----cccCCCCcEeccCCceEeecccCCCCCC
Q 009241 439 VETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFYYSPG 513 (539)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg-----~VvD~~~rv~g~~nL~V~DaSv~P~~~~ 513 (539)
|+... ...++++++++|++....+.+|++|||||| +|||++|||||++||||||+||||+.++
T Consensus 494 -----------pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~ 561 (587)
T 1gpe_A 494 -----------PGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVS 561 (587)
T ss_dssp -----------SGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCS
T ss_pred -----------CCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeeccCCCCCC
Confidence 11111 123688999999999989999999999999 5999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhh
Q 009241 514 TNPQATVMMLGRYMGVRILSER 535 (539)
Q Consensus 514 ~nP~lti~ala~r~a~~i~~~~ 535 (539)
+||++|+||||+|+||.|+++.
T Consensus 562 ~Np~~ti~aiAeraAd~I~~~~ 583 (587)
T 1gpe_A 562 SHVMTIFYGMALKVADAILDDY 583 (587)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999887654
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.1e-67 Score=562.67 Aligned_cols=461 Identities=28% Similarity=0.419 Sum_probs=341.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCCCCCCcccchhhHhhh---cCCCCCCCCccccCCCceeecCc
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVVSTRA 120 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 120 (539)
.+|||||||+|.+|+++|.+|++ |.+|+|||+|+..........+..+...+ .+|.|.+.+|.. .++.+.+.+|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 57999999999999999999999 68999999998643211122222232222 245566666666 6778899999
Q ss_pred ccccchhhhccceeecCChhhHhc-------CCCCHHHHhhhhhhhhcccc------c-----------CCCCchhHHHH
Q 009241 121 RVLGGGTCINAGFYTRAEPYYARE-------AGWDGRLVNESYQWVEKKVV------F-----------RPPMQRWQSAL 176 (539)
Q Consensus 121 ~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~------~-----------~~~~~~~~~~~ 176 (539)
++|||+|.+|++.+.|+.+.+|+. .+|.|+++.+||+++|+... + .+...+..+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 999999999999999999865542 47999999999999987654 1 11234567888
Q ss_pred HHHHHHcCCCCCCCCccCC--CCceeeeeeeecCCCcccchhh-hhhhc-CCCCcEEEcCcEEEEEEecCCCCCCCeEEE
Q 009241 177 RDGLVEVGVLPYNGFTYDH--LYGTKIGGTIIDQNSQRHTAAD-LLEYA-NPSGLTVLLHASVHKILFRNKGKARPVAHG 252 (539)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~g~r~~~~~-~l~~~-~~~gv~i~~~t~V~~l~~~~~~~~~~~v~g 252 (539)
.++++++|++.. ...... ..++......+..+|.|++... |+..+ ++.|++|++++.|++|++++++ +++|
T Consensus 171 ~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCTG 245 (546)
T ss_dssp HHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEEE
T ss_pred HHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEEE
Confidence 899999998754 221111 2222211111111677876544 66644 5789999999999999998732 8999
Q ss_pred EEEEeCC-CCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcceecCcccCccCccCCCCeEEeeCCC
Q 009241 253 VVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFVPSPV 331 (539)
Q Consensus 253 V~~~~~~-g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~~~~~~vG~~l~dh~~~~~~~~~~~ 331 (539)
|++.+.. |+.+++. +.|.||||||+++||+||++||||++++|+.+||+++.++|.||+||+||+...+.+..+.
T Consensus 246 V~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~ 321 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQ 321 (546)
T ss_dssp EEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESS
T ss_pred EEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecC
Confidence 9998632 6666665 3359999999999999999999999999999999999999999999999998877765543
Q ss_pred ccchhhHHhhhccccchhhhccCC---C----CCCCC-C-------CCCCCCcceEEEEeecCcCcceEEEecCCCCCCC
Q 009241 332 PVEVSLIQVVGITQFGSYIEGASG---V----NFAGG-S-------PSPRPYRGGFIFEKIIGPVSTGHLELRTRNPNDT 396 (539)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~g---~----~~~~~-~-------~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~ 396 (539)
+..... ........|.....+ + .+.+. . ..........+...+..|.|+|+|+|+++||.+.
T Consensus 322 ~~~~~~---~~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~ 398 (546)
T 2jbv_A 322 PMVAES---TQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRDK 398 (546)
T ss_dssp CCCSCC---SSSCCEEEEECSSTTCSSCSEEEEEESSCCCTTTGGGTCCCCSSEEEEEEEETTCCCCBEEECSSSCTTSC
T ss_pred CCcccc---cchhheEEEEecCCCCCCCceEEEeccccccccccccCccCCCCeEEEEEEEcccCcccEEEecCCCCCCC
Confidence 321100 000000112111000 0 00000 0 0001112334455678999999999999999999
Q ss_pred CeeecCCCCChH--HHHHHHHHHHHHHHHHccccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCC
Q 009241 397 PSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMT 474 (539)
Q Consensus 397 p~i~~~~~~~~~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (539)
|.|+++|+.++. |++.+.++++.+++++++.+++.+...+.. |+ ...++++++++|++....+
T Consensus 399 P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------p~----~~~~sd~~~~~~ir~~~~~ 463 (546)
T 2jbv_A 399 PMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELS-----------PG----VEAQTDEELQDYIRKTHNT 463 (546)
T ss_dssp CEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEEE-----------SC----TTCCSHHHHHHHHHHHCEE
T ss_pred ceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccccc-----------CC----CCCCCHHHHHHHHHhcCCc
Confidence 999999999999 999999999999999999888776543321 11 1346889999999999899
Q ss_pred Ccccccccccc------cccCCCCcEeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Q 009241 475 IWHYHGGCQVG------KVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 534 (539)
Q Consensus 475 ~~H~~Gt~~mg------~VvD~~~rv~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~~ 534 (539)
.+|++|||||| +|||++|||||++||||||+||||+++++||++||||+|+|+||.|+++
T Consensus 464 ~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 529 (546)
T 2jbv_A 464 VYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSA 529 (546)
T ss_dssp CSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC---
T ss_pred ccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhh
Confidence 99999999999 7999999999999999999999999999999999999999999988765
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1e-58 Score=495.77 Aligned_cols=448 Identities=22% Similarity=0.258 Sum_probs=302.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcc--------------cchhhH-hhhcCCCCCCCCcc
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNIT--------------NSGSFS-AELADLSPTSPSQR 108 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~~ 108 (539)
..+|||||||+|++|+++|.+|++ |.+|+|||+|+......... ..+.+. ..+.. ...+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~ 80 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD----SNPFW 80 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC----SCCTT
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC----CCccc
Confidence 457999999999999999999999 99999999998542110000 000100 00000 00011
Q ss_pred ccCCCceeecCcccccchhhhccceeecCChhhHhc-C----CCCHHHHhhhhhhhhcccccC--C------CCchhHHH
Q 009241 109 FISEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE-A----GWDGRLVNESYQWVEKKVVFR--P------PMQRWQSA 175 (539)
Q Consensus 109 ~~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~-~----gw~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~ 175 (539)
........+|+++||+|.+|++.+.|+.+.+++. . +|.+++ ++|++.+...... + ...+....
T Consensus 81 --~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 81 --WCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp --BCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred --cccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 0123456789999999999999999999877754 1 455544 8888877643210 0 12344567
Q ss_pred HHHHHHHcCCCCCCCC-ccC-CCCceeeeeeeecCCCcccchh-hhhh-hcCCCCcEEEcCcEEEEEEecCCCCCCCeEE
Q 009241 176 LRDGLVEVGVLPYNGF-TYD-HLYGTKIGGTIIDQNSQRHTAA-DLLE-YANPSGLTVLLHASVHKILFRNKGKARPVAH 251 (539)
Q Consensus 176 ~~~~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~g~r~~~~-~~l~-~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~ 251 (539)
+.++++++|+...... ... ...++... .+...+|.|++.. .|+. ..++.|++|++++.|++|+++++ +++
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~-~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~ 230 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYS-AFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QIL 230 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEEC-CBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeee-eeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEE
Confidence 7888888887532110 000 01111111 1111467777654 4666 44567999999999999999865 999
Q ss_pred EEEEEeC-CCCeE--EEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhC------CCcce-----ecCcccCccC
Q 009241 252 GVVFRDA-TDAEH--IAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAH------NITVV-----LDQPLVGQGM 317 (539)
Q Consensus 252 gV~~~~~-~g~~~--~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~------gi~~~-----~~~~~vG~~l 317 (539)
||++.+. +|+.+ ++. +++.||||||+++||+||++||||++++|+.+ ||+++ .++| ||+||
T Consensus 231 gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL 305 (546)
T 1kdg_A 231 GVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNA 305 (546)
T ss_dssp EEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTB
T ss_pred EEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCc
Confidence 9998753 36532 333 57999999999999999999999999999998 58774 7899 99999
Q ss_pred ccCCCCeEEeeCCCc-cchhh------------HHhhhccccch---------hhhccC---CC----C--CCCC---CC
Q 009241 318 SDNPMNAIFVPSPVP-VEVSL------------IQVVGITQFGS---------YIEGAS---GV----N--FAGG---SP 363 (539)
Q Consensus 318 ~dh~~~~~~~~~~~~-~~~~~------------~~~~~~~~~~~---------~~~~~~---g~----~--~~~~---~~ 363 (539)
+||+...+.+..+.. ..... ..+.. ...+. |+.... +. . +.+. ..
T Consensus 306 ~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (546)
T 1kdg_A 306 QDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLA-NQSGVFAGASPKLNFWRAYSGSDGFTRYAQGTVRPGAASVN 384 (546)
T ss_dssp BCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHH-HSCSGGGSCSCCEEEEEEEECTTSCEEEEEEEEEESCSCCC
T ss_pred ccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHH-cCCcccccCCcceEEEEccCCCCcchhhhhheecccccccc
Confidence 999988776652211 00000 00000 00000 111000 00 0 0000 00
Q ss_pred C---CCCCcceEEEEeecCc-CcceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHccccccccccccchh
Q 009241 364 S---PRPYRGGFIFEKIIGP-VSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMSV 439 (539)
Q Consensus 364 ~---~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (539)
. ........+...+..| .|+|+|+|+++| ..|.++++|+.++.|++.+.++++.+++++++.+...+.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~------ 456 (546)
T 1kdg_A 385 SSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTMI------ 456 (546)
T ss_dssp CSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEEE------
T ss_pred cccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCccccc------
Confidence 0 0001122333445677 999999999876 456788899999999999999999999998876432211
Q ss_pred HHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCcccccccccc-----cccCCCCcEeccCCceEeecccCCCCCCc
Q 009241 440 ETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFYYSPGT 514 (539)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg-----~VvD~~~rv~g~~nL~V~DaSv~P~~~~~ 514 (539)
.|...+++++++++++....+++|++|||||| +|||++|||||++||||||+||||+.+++
T Consensus 457 --------------~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~ 522 (546)
T 1kdg_A 457 --------------TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTG 522 (546)
T ss_dssp --------------ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSS
T ss_pred --------------CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCc
Confidence 11123577888888888788999999999999 69999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHh
Q 009241 515 NPQATVMMLGRYMGVRILSE 534 (539)
Q Consensus 515 nP~lti~ala~r~a~~i~~~ 534 (539)
||++||||+|+|+||.|+++
T Consensus 523 np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 523 NPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp CSHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999977764
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=1.2e-57 Score=481.71 Aligned_cols=436 Identities=18% Similarity=0.208 Sum_probs=291.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCC-CCCcccchhhH--hhhcCCCCCCCCc--------------
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG-NPNITNSGSFS--AELADLSPTSPSQ-------------- 107 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-------------- 107 (539)
.+|||||||+|++|+++|.+|++ |.+|+|||+|+.... ......+..+. ....+|.+.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 46999999999999999999999 999999999985431 22222221111 1112455544433
Q ss_pred --ccc------CCCceeecCcccccchhhhccceeecCChhhHhc--CCCCHHHHh-hhhhhhhcccccCCCC-------
Q 009241 108 --RFI------SEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE--AGWDGRLVN-ESYQWVEKKVVFRPPM------- 169 (539)
Q Consensus 108 --~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~~~~~~~~~~~------- 169 (539)
... .++.+.+.+|++|||+|.+|++.+.|+.+.+|+. .+|.++++. +||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 4667788999999999999999999999988875 578899999 9999999977654322
Q ss_pred --chhHHHHHHHHHHcCCCC----CC-CCc------cCCCCceeeee--eeecCCCcccch-hhhhhhc-CCCCcEEEcC
Q 009241 170 --QRWQSALRDGLVEVGVLP----YN-GFT------YDHLYGTKIGG--TIIDQNSQRHTA-ADLLEYA-NPSGLTVLLH 232 (539)
Q Consensus 170 --~~~~~~~~~~~~~~g~~~----~~-~~~------~~~~~~~~~~~--~~~~~~g~r~~~-~~~l~~~-~~~gv~i~~~ 232 (539)
.+..+.+.++++++|+++ .+ .+. ......|...+ ..-..+| |.+. ..|++.+ ++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 244577888899999842 11 100 00000011000 0001456 7764 3466644 4457999999
Q ss_pred cEEEEEEecCCCCCCCeEEEEEEEeCCC---CeEEEEeccCCCCeEEEcCCCcccHHHHHhcC-CCChhhhhhCCCccee
Q 009241 233 ASVHKILFRNKGKARPVAHGVVFRDATD---AEHIAYLRNGPKNEIIVSAGALGSPQLLMLSG-VGPADHLKAHNITVVL 308 (539)
Q Consensus 233 t~V~~l~~~~~~~~~~~v~gV~~~~~~g---~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SG-ig~~~~l~~~gi~~~~ 308 (539)
+.|++|++++++ .+++||++.+.+| +..++. ++.||||||+|+||+||++|| || +|++.
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~- 305 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTG--------TLPNL- 305 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTT--------SSTTC-
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccC--------CCCCC-
Confidence 999999998632 2899999986566 344444 679999999999999999999 87 56654
Q ss_pred cCcccCccCccCCCCeEEeeCCC-ccchhhHHhhhccc--cchhhhccCCC-CCCCCCCCCCCC-cceEEEEeecCcCcc
Q 009241 309 DQPLVGQGMSDNPMNAIFVPSPV-PVEVSLIQVVGITQ--FGSYIEGASGV-NFAGGSPSPRPY-RGGFIFEKIIGPVST 383 (539)
Q Consensus 309 ~~~~vG~~l~dh~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~~p~s~ 383 (539)
++.||+||+||+...+...... ... ..... +... +..|.....+. .+.... ...+ ....++..+..|.++
T Consensus 306 -~~~VG~nl~dh~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~sr 380 (504)
T 1n4w_A 306 -NSEVGAGWGPNGNIMTARANHMWNPT-GAHQS-SIPALGIDAWDNSDSSVFAEIAPM--PAGLETWVSLYLAITKNPQR 380 (504)
T ss_dssp -CTTTTCCBBCTTCEEEEEECCTTCCC-CSCCC-SSCCEEEEECCSSTTCEEEEEECC--CCSSCCCEEEEEEEECCCCC
T ss_pred -ChhhccccccCCcceeeeccCCCCcc-cCcCC-CccEEEEeccCCCCCceEEEeccC--ChHHHhhhhhheeeeccCCC
Confidence 4589999999997665432111 100 00000 0000 00010000000 000000 0000 123344456689999
Q ss_pred eEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHH-HHHHHHccccccccccccchhHHhhhhccCCCCCCCCCCCCCHH
Q 009241 384 GHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTST 462 (539)
Q Consensus 384 g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (539)
|+|+|+++| |.|+++|+.++ | +.+.++++ .+++++++.+. +...+ .. ..+
T Consensus 381 G~V~L~s~~----~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~-------------------~~--~~~ 431 (504)
T 1n4w_A 381 GTFVYDAAT----DRAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--IYRYD-------------------LF--GTQ 431 (504)
T ss_dssp BCEEEETTT----TEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCCS-------------------SS--SSS
T ss_pred cEEEecCCC----CceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--CcCCc-------------------hh--hhh
Confidence 999998766 47899999998 8 66777777 88888877653 11000 00 000
Q ss_pred HHHHHHHhccCCCcccccccccccccCCCCcEeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhh
Q 009241 463 SLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLA 537 (539)
Q Consensus 463 ~~~~~~~~~~~~~~H~~Gt~~mg~VvD~~~rv~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~~~~~ 537 (539)
++. ....+++|++||||||+|||++|||||++||||||+||||+++++||++||||||+|+||+|+++...
T Consensus 432 -~~~---~~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 502 (504)
T 1n4w_A 432 -LKA---FADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 502 (504)
T ss_dssp -CCS---EECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred -hhh---hccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhcc
Confidence 000 03467899999999999999999999999999999999999999999999999999999988876554
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=3.7e-57 Score=478.01 Aligned_cols=432 Identities=17% Similarity=0.186 Sum_probs=288.8
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccchhhHh-----hhcCCCCCCCCc---------
Q 009241 43 KPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSA-----ELADLSPTSPSQ--------- 107 (539)
Q Consensus 43 ~~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--------- 107 (539)
.+..+||+||||+|++|+++|.+|++ |.+|+|||+|+.... .......|.. ...+|.+.+.+|
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 34567999999999999999999999 999999999975321 0000001111 012344555443
Q ss_pred ------ccc------CCCceeecCcccccchhhhccceeecCChhhHhc--CCCCHHHHh-hhhhhhhcccccCCCC---
Q 009241 108 ------RFI------SEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE--AGWDGRLVN-ESYQWVEKKVVFRPPM--- 169 (539)
Q Consensus 108 ------~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~~~~~~~~~~~--- 169 (539)
... .++.+.+.+|++|||+|.+|++.+.|+.+.+|+. .+|.++++. +||+++|+.+...+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~ 164 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 164 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCcc
Confidence 233 4667788999999999999999999999988875 578889999 9999999987654322
Q ss_pred ------chhHHHHHHHHHHcCCCCC----C-CC--------c----cCCCCceeeeeeeecCCCcccch-hhhhhh-cCC
Q 009241 170 ------QRWQSALRDGLVEVGVLPY----N-GF--------T----YDHLYGTKIGGTIIDQNSQRHTA-ADLLEY-ANP 224 (539)
Q Consensus 170 ------~~~~~~~~~~~~~~g~~~~----~-~~--------~----~~~~~~~~~~~~~~~~~g~r~~~-~~~l~~-~~~ 224 (539)
.+..+.+.++++++|+.+. + .+ . +..+..|..+ ..+| |++. ..|++. .++
T Consensus 165 ~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~g----c~~g-R~s~~~~~l~~a~~~ 239 (507)
T 1coy_A 165 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYG----NNAG-KKSLDKTYLAQAAAT 239 (507)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTC----CSSS-BCCTTTTHHHHHHHT
T ss_pred ccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCcccccccccc----CCCC-CcChHHHHHHHHHhc
Confidence 2345678888999998421 1 10 0 0011111111 1457 7764 346663 445
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCC---eEEEEeccCCCCeEEEcCCCcccHHHHHhcC-CCChhhhh
Q 009241 225 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDA---EHIAYLRNGPKNEIIVSAGALGSPQLLMLSG-VGPADHLK 300 (539)
Q Consensus 225 ~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~---~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SG-ig~~~~l~ 300 (539)
.|++|++++.|++|++++++ .+++||++.+.+|. .+++. +++||||||+|+||+||++|| ||+
T Consensus 240 ~n~~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~----- 306 (507)
T 1coy_A 240 GKLTITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGH----- 306 (507)
T ss_dssp TCEEEECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTS-----
T ss_pred CCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCC-----
Confidence 67999999999999998742 27999999864563 34444 679999999999999999999 872
Q ss_pred hCCCcceecCcccCccCccCCCCeEEe-eCC-Cccch--hhHHhhhccccchhhhccCCC-CCCCCCCCCCCC-cceEEE
Q 009241 301 AHNITVVLDQPLVGQGMSDNPMNAIFV-PSP-VPVEV--SLIQVVGITQFGSYIEGASGV-NFAGGSPSPRPY-RGGFIF 374 (539)
Q Consensus 301 ~~gi~~~~~~~~vG~~l~dh~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~ 374 (539)
++ ...++||+||++|+...... ... ++... .......+. .|.....+. .+...+ ...+ ....++
T Consensus 307 ---lp--nl~d~VG~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 376 (507)
T 1coy_A 307 ---LP--NLSSQVGEGWGNNGNIMVGRANHMWDATGSKQATIPTMGID---NWADPTAPIFAEIAPL--PAGLETYVSLY 376 (507)
T ss_dssp ---ST--TSCTTTTCCBBCTTEEEEEEECCTTSCCCSCCCSSCCEEEE---CTTCTTSCEEEEEECC--CCSSCCCEEEE
T ss_pred ---CC--ccChhhCCccccCCcccccccccccccccccCCCcceEEEe---ccCCCCCCcEEEeccC--CHHHhhheeee
Confidence 22 12458999999998643211 111 11000 000000000 010000000 000000 0000 122334
Q ss_pred EeecCcCcceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHH-HHHHHHccccccccccccchhHHhhhhccCCCCCC
Q 009241 375 EKIIGPVSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNL 453 (539)
Q Consensus 375 ~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (539)
..+..|.++|+|+|+++|+ .|+++|+.++ |. .+.++++ .+++++++.+. +...+
T Consensus 377 ~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D~-~~~~~~~~~~~~i~~~~~~--~~~~~----------------- 431 (507)
T 1coy_A 377 LAITKNPERARFQFNSGTG----KVDLTWAQSQ-NQ-KGIDMAKKVFDKINQKEGT--IYRTD----------------- 431 (507)
T ss_dssp EEEECCCCCBCEEEETTTT----EEEECCCGGG-GH-HHHHHHHHHHHHHHHHHTC--CBCSS-----------------
T ss_pred EEEeeeCCCcEEEEccCCC----ceeeccCCCC-cH-HHHHHHHHHHHHHHhhcCC--cccCc-----------------
Confidence 4556799999999987654 8999999999 85 4555555 88888887652 21111
Q ss_pred CCCCCCCHHHHHHHHHhccCCCcccccccccccccCCCCcEeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHH
Q 009241 454 LPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILS 533 (539)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mg~VvD~~~rv~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~ 533 (539)
. . ++++ +.| ...+++|++||||||+|||++|||||++||||||+||||+++++||++||||||+|+||+|++
T Consensus 432 ~--~-~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~ 503 (507)
T 1coy_A 432 L--F-GVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIIS 503 (507)
T ss_dssp C--C---CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHH
T ss_pred c--c-ccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHH
Confidence 0 0 0000 112 346789999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhh
Q 009241 534 ERLA 537 (539)
Q Consensus 534 ~~~~ 537 (539)
++++
T Consensus 504 ~~~~ 507 (507)
T 1coy_A 504 SDIQ 507 (507)
T ss_dssp HTC-
T ss_pred HhcC
Confidence 8763
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.1e-46 Score=405.70 Aligned_cols=444 Identities=14% Similarity=0.115 Sum_probs=273.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccc----------hhhHhhh----cCC----C---
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNS----------GSFSAEL----ADL----S--- 101 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~----------~~~~~~~----~~~----~--- 101 (539)
|..+|||||||+|++|+++|+.|++ |.+|+||||++........... ..+.... ... .
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 4457999999999999999999999 9999999998865421110000 0000000 000 0
Q ss_pred -------CCCCCccccCC------Ccee----ecCcccccchhhhccceeecCChhhH--hcCCCC---HHHHhhhhhhh
Q 009241 102 -------PTSPSQRFISE------DGVV----STRARVLGGGTCINAGFYTRAEPYYA--REAGWD---GRLVNESYQWV 159 (539)
Q Consensus 102 -------~~~~~~~~~~~------~~~~----~~~g~~lGG~s~~~~~~~~r~~~~~~--~~~gw~---~~~~~~~~~~~ 159 (539)
........... ..+. ...+..+||.+.+|.+...+..+... ....|. .+++.++|...
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 00000000000 0011 12466789999999888777665320 011232 35566677766
Q ss_pred hcccccCCCC--chhH-HHHHHHHHHcCCCCCCCCccCCCCceeeeeeeecCCCcccch-hhhhh-h------cCCCCcE
Q 009241 160 EKKVVFRPPM--QRWQ-SALRDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTA-ADLLE-Y------ANPSGLT 228 (539)
Q Consensus 160 ~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~-~~~l~-~------~~~~gv~ 228 (539)
+..+...... .... ......+....... .. ... .............+++. ..++. . .++.|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~-~~--~~~---~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQ-RD--FQQ---IPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTT-SC--CEE---CCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhc-cc--ccc---cchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 6554332211 1111 11111222211100 00 000 00000111112223332 33444 2 3446999
Q ss_pred EEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCCChhhhhhCCCcce
Q 009241 229 VLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVV 307 (539)
Q Consensus 229 i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig~~~~l~~~gi~~~ 307 (539)
|++++.|++|+.++++ .+++||++.+ .+|+.+.+ .++.||||+|++.+|++|+.||||+..++..+||++
T Consensus 277 v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i-----~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~- 347 (623)
T 3pl8_A 277 LFPAVACERVVRNALN---SEIESLHIHDLISGDRFEI-----KADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE- 347 (623)
T ss_dssp EECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEE-----CEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS-
T ss_pred EEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEE-----ECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC-
Confidence 9999999999997542 3899999987 46766555 478999999999999999999999999999999998
Q ss_pred ecCcccCccCccCCCCeEEeeCCCccchhhHHh---hhcccc-----------------chhh-------hcc-CC----
Q 009241 308 LDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQV---VGITQF-----------------GSYI-------EGA-SG---- 355 (539)
Q Consensus 308 ~~~~~vG~~l~dh~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~~~-------~~~-~g---- 355 (539)
++|.||+||+||++..+.+...++........ .++..- ..|. ... .+
T Consensus 348 -~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~ 426 (623)
T 3pl8_A 348 -LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPI 426 (623)
T ss_dssp -SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTTCCCSS
T ss_pred -CCcccccchhhCcCceEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhccccccccc
Confidence 99999999999998887766553311100000 000000 0000 000 00
Q ss_pred ----------------CCCC----CCCCCC----C----CCcceEEEEeecCcCcceEEEecC--CCCCCCCeeecCCCC
Q 009241 356 ----------------VNFA----GGSPSP----R----PYRGGFIFEKIIGPVSTGHLELRT--RNPNDTPSVTFNYFK 405 (539)
Q Consensus 356 ----------------~~~~----~~~~~~----~----~~~~~~~~~~~~~p~s~g~v~l~~--~d~~~~p~i~~~~~~ 405 (539)
..|. .+.... . .............|.++|+|+|++ +|+++.|.++++|..
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~ 506 (623)
T 3pl8_A 427 PFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRF 506 (623)
T ss_dssp CTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEECCC
T ss_pred ccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEEeC
Confidence 0000 000000 0 000111222345688899999976 899999999999999
Q ss_pred ChH-HHHHHHHHHHHHHHHHccccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccc
Q 009241 406 EPE-DLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQV 484 (539)
Q Consensus 406 ~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~m 484 (539)
++. |++++.++++.+.+++++++......... . ....+++|++|||||
T Consensus 507 ~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------------------~------------~~~~~~~H~~gt~~m 555 (623)
T 3pl8_A 507 PAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLPQ-------------------F------------MEPGLVLHLGGTHRM 555 (623)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTEEECTTSCSE-------------------E------------CCTTTTCCCBCTTCB
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCcccCchhh-------------------c------------cCCCCcccCCCceeC
Confidence 999 99999999999999998876543211000 0 013568899999999
Q ss_pred c------ccc-CCCCcEeccCCceEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Q 009241 485 G------KVV-DHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 534 (539)
Q Consensus 485 g------~Vv-D~~~rv~g~~nL~V~DaSv~P~~~~~nP~lti~ala~r~a~~i~~~ 534 (539)
| +|| |++|||||++||||+|+|+||+++++||++||||||+|+|++|+++
T Consensus 556 g~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~ 612 (623)
T 3pl8_A 556 GFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQN 612 (623)
T ss_dssp CSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 9 486 9999999999999999999999999999999999999999988875
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.64 E-value=1.6e-15 Score=160.13 Aligned_cols=190 Identities=18% Similarity=0.215 Sum_probs=109.9
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccchhhHhhhcCCCCCCCCccccCCCceeecCccc
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARV 122 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 122 (539)
++.+|||||||+|++|+++|++|++ |.+|+||||++.
T Consensus 38 ~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~------------------------------------------ 75 (510)
T 4at0_A 38 WDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSG------------------------------------------ 75 (510)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS------------------------------------------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------
Confidence 3668999999999999999999999 999999999975
Q ss_pred ccchhhhccceeecCC-hhhHhcCC--CCHHHHhhhhhhhhcccccCCCCc---h---hHHHHHHHHHHcCCCCCCCCc-
Q 009241 123 LGGGTCINAGFYTRAE-PYYAREAG--WDGRLVNESYQWVEKKVVFRPPMQ---R---WQSALRDGLVEVGVLPYNGFT- 192 (539)
Q Consensus 123 lGG~s~~~~~~~~r~~-~~~~~~~g--w~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~g~~~~~~~~- 192 (539)
+||+|..+++.++.+. .......+ .+.+.+. ++..+......... . ......+++++.|+.......
T Consensus 76 ~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~ 152 (510)
T 4at0_A 76 WGGATALAGGFIYLGGGTPLQKACGFDDSPENMK---TFMMAALGPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWG 152 (510)
T ss_dssp SCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHH---HHHHHHSCSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEEC
T ss_pred CCCcchhcCcceecCCCCHHHHHhCCCCCHHHHH---HHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccC
Confidence 5677877777654432 12222222 2223222 22211111111110 0 122344566677765322100
Q ss_pred -----cCCCCce------------------eeeeeeecC----CCccc----chhhhhhhcCCCCcEEEcCcEEEEEEec
Q 009241 193 -----YDHLYGT------------------KIGGTIIDQ----NSQRH----TAADLLEYANPSGLTVLLHASVHKILFR 241 (539)
Q Consensus 193 -----~~~~~~~------------------~~~~~~~~~----~g~r~----~~~~~l~~~~~~gv~i~~~t~V~~l~~~ 241 (539)
.....+. ..+. .... .+... ....++..+++.|++|+++++|++|+.+
T Consensus 153 ~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~-~~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~ 231 (510)
T 4at0_A 153 EPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGH-VPQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTD 231 (510)
T ss_dssp SSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEE-CCCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEEC
T ss_pred CcccccCCcccccccCcccccccccccCccccee-eecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEEC
Confidence 0000000 0000 0000 11111 1122445566679999999999999998
Q ss_pred CCCCCCCeEEEEEEEeCCCCeEEEEeccCCC-CeEEEcCCCcccHHHHH
Q 009241 242 NKGKARPVAHGVVFRDATDAEHIAYLRNGPK-NEIIVSAGALGSPQLLM 289 (539)
Q Consensus 242 ~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a-~~VVlAaG~~~sp~lLl 289 (539)
+++ +|+||++.+ +++.+++. + |.||||+|+++...-|+
T Consensus 232 ~~g----~v~GV~~~~-~g~~~~i~-----A~k~VVlAtGG~~~n~~m~ 270 (510)
T 4at0_A 232 DTG----RVVGIVAKQ-YGKEVAVR-----ARRGVVLATGSFAYNDKMI 270 (510)
T ss_dssp TTC----CEEEEEEEE-TTEEEEEE-----EEEEEEECCCCCTTCHHHH
T ss_pred CCC----cEEEEEEEE-CCcEEEEE-----eCCeEEEeCCChhhCHHHH
Confidence 543 999999886 55555554 6 69999999998544444
No 13
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.55 E-value=4e-14 Score=151.57 Aligned_cols=189 Identities=15% Similarity=0.163 Sum_probs=108.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccchhhHhhhcCCCCCCCCccccCCCceeecCccccc
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARVLG 124 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lG 124 (539)
.++||||||+|++|+++|+.|++ |.+|+||||.+. +|
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~------------------------------------------~g 162 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPV------------------------------------------IG 162 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS------------------------------------------SC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------CC
Confidence 36999999999999999999999 999999999975 45
Q ss_pred chhhhccceeecCChhhHhcCCCCHHHHhhhhhhhhcccccCCCCc------hhHHHHHHHHHHcCCCCCCCCccCCCCc
Q 009241 125 GGTCINAGFYTRAEPYYAREAGWDGRLVNESYQWVEKKVVFRPPMQ------RWQSALRDGLVEVGVLPYNGFTYDHLYG 198 (539)
Q Consensus 125 G~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (539)
|.+...++.+........+..+.. +..+.++....+.-....... .......+++.+.|+.... . ....+
T Consensus 163 g~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~--~~~~g 238 (571)
T 1y0p_A 163 GNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTD-V--GMMGG 238 (571)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-E--ECCTT
T ss_pred CchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCCcc-C--cccCC
Confidence 666655554433332222223321 112222222111000001000 0112344566677765321 0 00011
Q ss_pred eeeeeeeecCCCcccc--h-hhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeE
Q 009241 199 TKIGGTIIDQNSQRHT--A-ADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEI 275 (539)
Q Consensus 199 ~~~~~~~~~~~g~r~~--~-~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~V 275 (539)
..........++.... . ..+...+++.|++|+++++|++|+.++++ +|+||.+.+.+|+...+. ++.|
T Consensus 239 ~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~V 309 (571)
T 1y0p_A 239 ASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAV 309 (571)
T ss_dssp CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred cCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeE
Confidence 1111111122221111 1 12444566679999999999999987733 899999986567655554 7899
Q ss_pred EEcCCCcccHHHHH
Q 009241 276 IVSAGALGSPQLLM 289 (539)
Q Consensus 276 VlAaG~~~sp~lLl 289 (539)
|||+|++...+-|+
T Consensus 310 VlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 310 ILATGGFAKNNERV 323 (571)
T ss_dssp EECCCCCTTCHHHH
T ss_pred EEeCCCcccCHHHH
Confidence 99999998755444
No 14
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.55 E-value=2.5e-14 Score=152.94 Aligned_cols=190 Identities=16% Similarity=0.194 Sum_probs=110.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccchhhHhhhcCCCCCCCCccccCCCceeecCcccc
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARVL 123 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 123 (539)
+.++||||||+|++|+++|+.|++ |.+|+||||.+. +
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~------------------------------------------~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF------------------------------------------S 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS------------------------------------------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------C
Confidence 457999999999999999999999 999999999975 4
Q ss_pred cchhhhccceeecCChhhHhcCCCCHHHHhhhhhhhhcccccCCCCc------hhHHHHHHHHHHcCCCCCCCCccCCCC
Q 009241 124 GGGTCINAGFYTRAEPYYAREAGWDGRLVNESYQWVEKKVVFRPPMQ------RWQSALRDGLVEVGVLPYNGFTYDHLY 197 (539)
Q Consensus 124 GG~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (539)
||.|...++.+........+..+.. +..+.++....+......... .......+++.+.|+.... . ....
T Consensus 157 gg~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~-~--~~~~ 232 (566)
T 1qo8_A 157 GGNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDD-L--KRSG 232 (566)
T ss_dssp CTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-E--ECCT
T ss_pred CCcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCcccc-c--cccC
Confidence 5666666655543333232222221 112222222211111111100 0122345566677765311 0 0000
Q ss_pred ceeeeeeeecCCCcccc--h-hhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCe
Q 009241 198 GTKIGGTIIDQNSQRHT--A-ADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNE 274 (539)
Q Consensus 198 ~~~~~~~~~~~~g~r~~--~-~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~ 274 (539)
+..........++.... . ..+...+++.|++|+++++|++|+.++++ +|+||.+.+.+|+...+. ++.
T Consensus 233 g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~ 303 (566)
T 1qo8_A 233 GARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKS 303 (566)
T ss_dssp TCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEE
T ss_pred CCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCE
Confidence 11011111111221111 1 12444556679999999999999988732 999999986567655554 699
Q ss_pred EEEcCCCcccHHHHH
Q 009241 275 IIVSAGALGSPQLLM 289 (539)
Q Consensus 275 VVlAaG~~~sp~lLl 289 (539)
||||+|++...+-|+
T Consensus 304 VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 304 VVLATGGYGMNKEMI 318 (566)
T ss_dssp EEECCCCCTTCHHHH
T ss_pred EEEecCCcccCHHHH
Confidence 999999998765544
No 15
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.49 E-value=1.3e-13 Score=145.48 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=45.1
Q ss_pred cCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHH
Q 009241 207 DQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 286 (539)
Q Consensus 207 ~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~ 286 (539)
+..|...-...+.+.+++.|++|+++++|++|+.+++ +++||++. +|+. + .++.||++++...+-+
T Consensus 216 p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~-----~ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 216 PRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--F-----LTQAVASNADVVHTYR 281 (501)
T ss_dssp ETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSCEEECCC------
T ss_pred eCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--E-----EcCEEEECCCHHHHHH
Confidence 3444333333355566778999999999999999987 99999875 5754 3 3799999999888877
Q ss_pred HHHh
Q 009241 287 LLML 290 (539)
Q Consensus 287 lLl~ 290 (539)
.|+-
T Consensus 282 ~Ll~ 285 (501)
T 4dgk_A 282 DLLS 285 (501)
T ss_dssp ----
T ss_pred Hhcc
Confidence 6663
No 16
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.45 E-value=6.5e-13 Score=141.92 Aligned_cols=188 Identities=21% Similarity=0.198 Sum_probs=102.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCCCCcccchhhHhhhcCCCCCCCCccccCCCceeecCccccc
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARVLG 124 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lG 124 (539)
.++||||||+|++|+++|+.|++ |.+|+||||.+. +|
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~------------------------------------------~~ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPI------------------------------------------PG 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSS------------------------------------------SC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC------------------------------------------CC
Confidence 46899999999999999999999 999999999975 34
Q ss_pred chhhhccceeecCChhhHhcCCCCHHHHhhhhhhhhcccccCCCCc------hhHHHHHHHHHHcCCCCCCCCccCCCCc
Q 009241 125 GGTCINAGFYTRAEPYYAREAGWDGRLVNESYQWVEKKVVFRPPMQ------RWQSALRDGLVEVGVLPYNGFTYDHLYG 198 (539)
Q Consensus 125 G~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (539)
|.+...++.+........+..+.. +..+.++....+......... .......+++.+.|+.... . ....+
T Consensus 163 ~~~~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~-~--~~~gg 238 (572)
T 1d4d_A 163 GNTKLAAGGMNAAETKPQAKLGIE-DKKQIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTD-V--GRMGG 238 (572)
T ss_dssp TTGGGCCSCEECCSSSTTGGGTCC-CCTHHHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCE-E--ECCTT
T ss_pred cchhhhCCeeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCcccc-c--cccCC
Confidence 555544444322221111111111 111111111111000000000 0122344566666765311 0 00011
Q ss_pred eeeeeeeecCCCccc--ch-hhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeE
Q 009241 199 TKIGGTIIDQNSQRH--TA-ADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEI 275 (539)
Q Consensus 199 ~~~~~~~~~~~g~r~--~~-~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~V 275 (539)
..........++... .. ..+...+++.|++|+++++|++|+.++++ +|+||++.+.+|+...+. ++.|
T Consensus 239 ~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~V 309 (572)
T 1d4d_A 239 ASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAV 309 (572)
T ss_dssp CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred CcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEE
Confidence 101111111222111 11 12444566679999999999999987722 899999986567655554 7999
Q ss_pred EEcCCCcccHHHH
Q 009241 276 IVSAGALGSPQLL 288 (539)
Q Consensus 276 VlAaG~~~sp~lL 288 (539)
|||+|++...+-|
T Consensus 310 VlAtGg~~~~~~~ 322 (572)
T 1d4d_A 310 VIAAGGFAKNNER 322 (572)
T ss_dssp EECCCCCTTCHHH
T ss_pred EEeCCCCccCHHH
Confidence 9999999864333
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.42 E-value=1.1e-12 Score=141.42 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=45.6
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+.+.|++|++++.|++|+.+++ +|.||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 34455567999999999999998765 999999875 467655554 7999999999875
No 18
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.38 E-value=2.7e-12 Score=137.53 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=46.7
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+.+.|++|++++.|++|+.+++ +|.||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 44566678999999999999998765 999999876 467655554 7899999999875
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.35 E-value=3.6e-12 Score=136.26 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=45.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+.+.|++|+++++|++|+.++++ ++.||.+.+ .+|+...+. ++.||||+|+++.
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 444555679999999999999986333 899999876 467655554 7899999999875
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.35 E-value=4e-12 Score=134.65 Aligned_cols=62 Identities=11% Similarity=0.179 Sum_probs=43.9
Q ss_pred hhhhcCC-CCcEEEcCcEEEEEEecCCC--CCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANP-SGLTVLLHASVHKILFRNKG--KARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~-~gv~i~~~t~V~~l~~~~~~--~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+++ .|++|++++.|++|+.++++ ....++.||.+.+ .+|+...+. ++.||||+|+++.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 3444444 79999999999999984321 0001799999886 356554554 7999999999874
No 21
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.30 E-value=2.4e-12 Score=129.72 Aligned_cols=63 Identities=17% Similarity=0.172 Sum_probs=45.2
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhc-CC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLS-GV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~S-Gi 293 (539)
+...+++.|++|+++++|++|..+++ .+..|.. .+|+...+. ++.||+|+|++ +..|+... |+
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTEETS
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHhcCC
Confidence 44566678999999999999998776 3233443 356544454 78999999985 77777665 55
No 22
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.29 E-value=3.2e-11 Score=129.25 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=45.6
Q ss_pred hhhhcCCCC-cEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccH
Q 009241 218 LLEYANPSG-LTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSP 285 (539)
Q Consensus 218 ~l~~~~~~g-v~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp 285 (539)
++..+.+.| ++|++++.|++|+.+++ ++.||.+.+ .+|+...+. ++.||+|+|+++..
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 445555666 99999999999998865 899998875 467654554 78999999998765
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=2.1e-11 Score=126.37 Aligned_cols=55 Identities=22% Similarity=0.413 Sum_probs=42.7
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHH
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 286 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~ 286 (539)
+...+++.|++|+++++|++|..+++ ++.+|.+. +|+ .+. ++.||+|+|++..|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCCC
Confidence 44555668999999999999998765 77888764 564 233 799999999988664
No 24
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.27 E-value=1.3e-11 Score=131.30 Aligned_cols=66 Identities=23% Similarity=0.321 Sum_probs=50.8
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
+...+.+.|++|+++++|++|..+++ ++.||.+.+. +|+...+. ++.||+|+|.+ +..++...|+.
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGGG-HHHHHHTTTCC
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCcc-hHHHHHhcCCC
Confidence 44456678999999999999999876 8999999863 45445554 79999999974 67777666553
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=8.2e-12 Score=126.55 Aligned_cols=36 Identities=39% Similarity=0.527 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhcCCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQNASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~G~~VlvlEkG~~ 80 (539)
+.++||||||+|.+|+++|++|++|.+|+||||++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCC
Confidence 446899999999999999999999999999999864
No 26
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.23 E-value=1.4e-10 Score=123.72 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=49.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
++..+.+.|++|+++|+|++|..+++ ++.+|.+.+. +|+...+. ++.||+|+|++ +..++...|+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCCS
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhcc
Confidence 34456678999999999999998876 8999998763 35444454 79999999986 6677655443
No 27
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.22 E-value=8.4e-12 Score=127.70 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=32.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+..+|||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3557999999999999999999999 999999999975
No 28
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.22 E-value=2.2e-11 Score=131.23 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=44.6
Q ss_pred hhhcCCC--CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 219 LEYANPS--GLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 219 l~~~~~~--gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
...+++. |++|+.++.|++|+.++++ .++|.||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 173 ~~~a~~~~~gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 173 AEAAKNALGQDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHCTTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCcccc
Confidence 3344444 9999999999999987651 12899998876 356655554 7999999999874
No 29
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.21 E-value=5.4e-11 Score=128.66 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=43.9
Q ss_pred hhhcCCC-Cc-EEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 219 LEYANPS-GL-TVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 219 l~~~~~~-gv-~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
...+++. |+ +|++++.|++|+.++++ .++|+||.+.+ .+|+...+. ++.||||+|+++.
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 3344445 99 99999999999987541 12899998765 456555554 7999999999875
No 30
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.19 E-value=3.3e-11 Score=122.27 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=33.2
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|..++||||||+|++|+++|++|++ |.+|+||||+.
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3457999999999999999999999 99999999985
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.14 E-value=2.1e-10 Score=118.56 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=34.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
++.++||||||+|++|+++|++|++ |. +|+||||++..
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3457999999999999999999999 99 99999998753
No 32
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.13 E-value=1.4e-10 Score=120.79 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=40.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+++.|++++++++| +|+.+++ ++.||.+.+.+|+ + .++.||+|+|++..
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g~---~-----~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGLV---E-----DVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEEE---C-----CCSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCCe---E-----EeeeEEECCCCCcc
Confidence 444455679999999999 9988765 8999987643332 2 37999999998753
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.13 E-value=8e-11 Score=119.35 Aligned_cols=40 Identities=33% Similarity=0.512 Sum_probs=34.1
Q ss_pred cCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 41 AAKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 41 ~~~~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+...+.++||||||+|++|+++|++|++ |.+|+||||+..
T Consensus 11 ~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 11 IRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp ---CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred hhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3344567999999999999999999999 999999999864
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.12 E-value=4.9e-10 Score=117.85 Aligned_cols=60 Identities=15% Similarity=0.017 Sum_probs=44.5
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHHH
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 289 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl 289 (539)
+...+.+.|++++++++|++|..++ ++.+|.+.+ .+|+...+. ++.||+|+|++ +..++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 4445667899999999999998764 467888765 356544554 79999999986 556554
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.11 E-value=1.4e-10 Score=118.27 Aligned_cols=35 Identities=37% Similarity=0.607 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999874
No 36
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.10 E-value=3.9e-10 Score=115.16 Aligned_cols=36 Identities=36% Similarity=0.542 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--C-CeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ--N-ASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~--G-~~VlvlEkG~~ 80 (539)
+.++||||||+|++|+++|++|++ | .+|+||||+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 457999999999999999999998 8 89999999873
No 37
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.09 E-value=1.4e-10 Score=118.23 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++|||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 36999999999999999999999 999999999875
No 38
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.08 E-value=2.8e-10 Score=127.07 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=44.6
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
+...+++.|++|+++++|++|..+++ ++.+|... +| .+. ++.||+|+|++ +..++...|+
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i~-----Ad~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VIP-----ADIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EEE-----CSEEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EEE-----CCEEEECCccc-hHHHHHHhCC
Confidence 44566678999999999999998765 77777642 44 233 89999999986 5666655554
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.08 E-value=2.9e-10 Score=124.06 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+||||||+|.+|+++|++|++ |.+|+||||.+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45999999999999999999999 999999999764
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.06 E-value=3.8e-10 Score=123.32 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||+|.+|+++|++|++ |.+|+||||+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 46999999999999999999999 999999999864
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.98 E-value=1.3e-09 Score=105.77 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~ 80 (539)
.+|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 46899999999999999999998 899999999875
No 42
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.98 E-value=6.3e-10 Score=115.37 Aligned_cols=33 Identities=36% Similarity=0.687 Sum_probs=31.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-CeEEEEcCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERG 78 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG 78 (539)
.++||||||+|++|+++|++|++ | .+|+||||.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 47999999999999999999999 9 999999993
No 43
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.98 E-value=1.3e-09 Score=112.00 Aligned_cols=57 Identities=23% Similarity=0.248 Sum_probs=45.0
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHH
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 289 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl 289 (539)
+...+++.|++|+++++|++|..+++ +++||.+ +|+. + .++.||+|++...+.+||-
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~~--~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDRI--H-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTEE--E-----ECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCEE--E-----ECCEEEECCCHHHHHHhcC
Confidence 44566678999999999999999876 8888865 3532 3 3799999999988887654
No 44
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.97 E-value=2.1e-09 Score=109.39 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=41.5
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALG 283 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~ 283 (539)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +....+. ++.||.|+|...
T Consensus 108 L~~~~~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~-~~~~~~~-----a~~vV~A~G~~s 162 (397)
T 3cgv_A 108 LAALAAKAGADVWVKSPALGVIKENG-----KVAGAKIRHN-NEIVDVR-----AKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT-----EEEEEEEEET-TEEEEEE-----EEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEeCC-----EEEEEEEEEC-CeEEEEE-----cCEEEECCCcch
Confidence 33455567999999999999998865 8999988753 3333443 789999999754
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.97 E-value=6.1e-10 Score=113.09 Aligned_cols=34 Identities=29% Similarity=0.528 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++||||||+|++|+++|++|++ |.+|+||||+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999864
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.97 E-value=4.6e-10 Score=113.27 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||||||+|++|+++|++|++ |.+|+||||+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 5899999999999999999999 999999999875
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.97 E-value=9.4e-10 Score=115.75 Aligned_cols=36 Identities=31% Similarity=0.317 Sum_probs=33.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..++||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 345899999999999999999999 999999999964
No 48
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.95 E-value=1.2e-09 Score=113.47 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=43.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCCeEEEcCCCcc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALG 283 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~g~~~~~~~~~~~a~~VVlAaG~~~ 283 (539)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +|+...+. ++.||.|+|...
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s 162 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGGC
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCch
Confidence 34455557999999999999998776 8999988764 56544454 899999999754
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.91 E-value=2.1e-09 Score=109.10 Aligned_cols=34 Identities=29% Similarity=0.587 Sum_probs=32.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 5999999999999999999999 999999999864
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.90 E-value=1.9e-09 Score=113.77 Aligned_cols=57 Identities=26% Similarity=0.361 Sum_probs=45.5
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCccc
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGS 284 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~s 284 (539)
+...+.+.|++|+++++|++|..+++ ++.+|.+.+.+|+..++. ++.||.|+|....
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTTCS
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcchH
Confidence 33455568999999999999998776 899999987778655554 7999999998653
No 51
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.88 E-value=7e-09 Score=101.85 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.+|||||||+|++|+++|+.|++ |.+|+|||+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 46999999999999999999998 899999999875
No 52
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.87 E-value=5.1e-09 Score=107.59 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=45.9
Q ss_pred cCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHH
Q 009241 207 DQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 286 (539)
Q Consensus 207 ~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~ 286 (539)
...|...-...+...+++.|++|+++++|++|..+++ ++ | .. +|+. + .++.||+|+|.....+
T Consensus 184 ~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-----~v--V--~~-~g~~--~-----~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 184 IRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEK-----KV--Y--TR-DNEE--Y-----SFDVAISNVGVRETVK 246 (421)
T ss_dssp ETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTT-----EE--E--ET-TCCE--E-----ECSEEEECSCHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECC-----EE--E--Ee-CCcE--E-----EeCEEEECCCHHHHHH
Confidence 3445332233355566778999999999999998765 55 3 32 5543 3 3799999999988888
Q ss_pred HHH
Q 009241 287 LLM 289 (539)
Q Consensus 287 lLl 289 (539)
||-
T Consensus 247 ll~ 249 (421)
T 3nrn_A 247 LIG 249 (421)
T ss_dssp HHC
T ss_pred hcC
Confidence 663
No 53
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.80 E-value=9.5e-09 Score=105.45 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35999999999999999999999 999999999864
No 54
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.78 E-value=1.1e-08 Score=105.44 Aligned_cols=40 Identities=33% Similarity=0.525 Sum_probs=36.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 83 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~ 83 (539)
|+++|||||||+|.+|+++|+.|++ |.+|+||||++....
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 4567999999999999999999999 999999999986543
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.74 E-value=2.4e-08 Score=106.57 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||||++|+++|+.|++ |.+|+|||+.+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 36999999999999999999999 999999999864
No 56
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.73 E-value=2.9e-08 Score=96.93 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.+|||+|||+|++|+++|+.|++ |.+|+|+|+.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 46899999999999999999997 689999999875
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.72 E-value=2.6e-08 Score=105.31 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+|||||||||++|+.||+.|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 36999999999999999999999 99999999984
No 58
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.70 E-value=2.1e-08 Score=99.49 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++||+|||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999 999999999864
No 59
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.69 E-value=2.8e-08 Score=98.97 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
+||+|||+|++|+++|+.|++ |.+|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 599999999999999999987 689999999864
No 60
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.68 E-value=4.7e-08 Score=104.48 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=43.7
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe----CCCCe-------EEEEeccCCCCeEEEcCCCcccH
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD----ATDAE-------HIAYLRNGPKNEIIVSAGALGSP 285 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~----~~g~~-------~~~~~~~~~a~~VVlAaG~~~sp 285 (539)
+...+++.|++|+++++|++|+.++++ +++||.+.+ .+|+. ..+. ++.||+|.|+...-
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCHH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCchH
Confidence 344555679999999999999988754 788888753 34532 2343 89999999997764
No 61
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.66 E-value=3.5e-08 Score=104.72 Aligned_cols=34 Identities=35% Similarity=0.561 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+|||||||||++|+.+|+.|++ |.+|+|||+++
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 47999999999999999999999 99999999984
No 62
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.66 E-value=6.8e-07 Score=87.72 Aligned_cols=62 Identities=18% Similarity=0.198 Sum_probs=46.3
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 221 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 221 ~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
..++.|+++++++.|+++..+ + ++.+|++.+ .+|+...+. ++.||+|+|.-.+..++..+|+
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTTC
T ss_pred HHhCCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcCe
Confidence 334569999999999999865 3 677888875 346654554 7999999998777677766655
No 63
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.66 E-value=1.2e-08 Score=104.10 Aligned_cols=35 Identities=40% Similarity=0.602 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+++|+.|++ |.+|+||||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 45999999999999999999987 799999999854
No 64
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.62 E-value=1.2e-07 Score=92.61 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+++|||+|||+|+||++||++|++ |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 457999999999999999999999 99999999975
No 65
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.62 E-value=4.2e-08 Score=97.86 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=32.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||+|||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5899999999999999999999 999999999874
No 66
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.62 E-value=1.1e-07 Score=99.81 Aligned_cols=39 Identities=36% Similarity=0.383 Sum_probs=34.6
Q ss_pred CCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 42 AKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 42 ~~~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++++++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 345778999999999999999999999 999999999865
No 67
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.61 E-value=2.5e-07 Score=91.00 Aligned_cols=66 Identities=21% Similarity=0.377 Sum_probs=47.2
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
+.+.+.+.|++++++++|++|..+++ ++.+|.+.+ .+|+...+ .++.||+|+|...++.+|..+|+
T Consensus 196 l~~~l~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 196 YVQEIKKRNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSCC
T ss_pred HHHHHhcCCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhccc
Confidence 33344468999999999999987654 688888875 25654444 48999999997666666554443
No 68
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.61 E-value=1.6e-07 Score=99.55 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=33.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999875
No 69
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.61 E-value=1.9e-07 Score=87.48 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=31.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+|||+|||+|++|+.+|..|++ |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5999999999999999999999 99999999984
No 70
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.59 E-value=4.3e-08 Score=103.99 Aligned_cols=35 Identities=34% Similarity=0.619 Sum_probs=32.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
..+|||||||+|.+|+.+|+.|++ |.+|+|||+.+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 457999999999999999999999 99999999974
No 71
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.59 E-value=1.9e-07 Score=95.26 Aligned_cols=37 Identities=27% Similarity=0.263 Sum_probs=32.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+.|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 3457999999999999999999999 999999999864
No 72
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.55 E-value=5.7e-08 Score=103.36 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=30.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 346999999999999999999999 999999999875
No 73
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.55 E-value=4e-08 Score=99.87 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++||+|||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5899999999999999999999 999999999763
No 74
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.51 E-value=5.7e-08 Score=101.80 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+||+|||||++|+++|..|++ |.+|+||||.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 456999999999999999999999 999999999864
No 75
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=2.5e-07 Score=96.97 Aligned_cols=37 Identities=35% Similarity=0.410 Sum_probs=33.2
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.+.++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3567999999999999999999999 999999999865
No 76
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.50 E-value=3e-07 Score=93.57 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=32.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||+|||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 35999999999999999999999 999999999864
No 77
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.49 E-value=1.2e-06 Score=92.27 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=47.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHH-HHHhcCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ-LLMLSGV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~-lLl~SGi 293 (539)
+...+++.|++++++++|++|..++++ ++.++.+...+|+ ..+ .++.||+|+|...+.. +|...|+
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcCC
Confidence 334556789999999999999876553 6766666554663 234 3799999999877766 5666665
No 78
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.48 E-value=2e-07 Score=98.73 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+||||||+|++|+.+|.+|++ |.+|+|||+.+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 456999999999999999999999 999999999874
No 79
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.48 E-value=7.7e-07 Score=90.44 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=32.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+||+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 35899999999999999999999 999999999864
No 80
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.46 E-value=3.5e-07 Score=94.55 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CC--eEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~~ 80 (539)
...+||+|||+|++|+++|..|++ |. +|+|+|+.+.
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 42 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCC
Confidence 346899999999999999999999 98 9999999864
No 81
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.46 E-value=2.9e-07 Score=91.15 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+||+|||+|++|+++|+.|++ |.+|+|+|+.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999864
No 82
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.45 E-value=2.6e-07 Score=91.44 Aligned_cols=56 Identities=7% Similarity=0.132 Sum_probs=42.0
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 223 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 223 ~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
+..|+++++++.|++|..+++ ++.+|.+.+. +|+...+. ++.||+|+|...++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhHh
Confidence 345999999999999987765 7889988763 34444443 79999999976555443
No 83
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.45 E-value=3.3e-07 Score=95.96 Aligned_cols=36 Identities=33% Similarity=0.520 Sum_probs=31.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+|||+|||+|++|+++|.+|++ |.+|+|+||.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 346999999999999999999999 999999999764
No 84
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.45 E-value=3.4e-07 Score=91.71 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=32.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+||+|||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 48 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ 48 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 446999999999999999999999 999999999864
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.44 E-value=3.8e-07 Score=96.36 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhh-c-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLS-Q-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La-~-G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+.+|.+|+ + |.+|+|||+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 3689999999999999999999 8 999999999864
No 86
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.44 E-value=9e-08 Score=91.39 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++||+|||||++|+++|+.|++ |.+|+||||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4899999999999999999999 999999999875
No 87
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.43 E-value=6.9e-07 Score=92.86 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=32.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+.+|||||||+|++|+++|.+|++ |.+|+||||.+.
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 346999999999999999999999 999999997654
No 88
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.41 E-value=3.3e-06 Score=82.48 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=44.5
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 221 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 221 ~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
..++.|+++++++.|++|..+++ ++.+|.+...+|+...+ .++.||+|+|...++.++
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEIL 249 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGG
T ss_pred HHhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhh
Confidence 33578999999999999987765 88899887556765444 489999999976554443
No 89
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.40 E-value=1.6e-07 Score=92.19 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+|||+|||+|+||+++|.+|++ |++|+|+||+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 37999999999999999999999 99999999974
No 90
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.40 E-value=3.4e-07 Score=90.30 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.+||+|||+|++|+++|+.|++ |.+|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 5899999999999999999999 999999999875
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.39 E-value=6.5e-07 Score=94.85 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..++||||||+|++|+++|.+|++ |.+|+||||++.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999875
No 92
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.39 E-value=5.2e-07 Score=90.56 Aligned_cols=33 Identities=33% Similarity=0.594 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
++||+|||+|++|+++|.+|++ |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5899999999999999999999 99 999999986
No 93
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.37 E-value=6.9e-07 Score=91.39 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=48.2
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 220 EYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 220 ~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
...++.|+++++++.|++|..+++ ++.+|+.. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--I-----PADIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--E-----ECSEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCccChHHHHhCCCC
Confidence 355678999999999999987665 78888775 5643 3 379999999988887787777764
No 94
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.34 E-value=1.7e-07 Score=91.95 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=32.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|++.|||+|||+|+||++||.+|++ |.+|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4557999999999999999999999 99999999975
No 95
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.33 E-value=2.8e-06 Score=86.64 Aligned_cols=35 Identities=31% Similarity=0.444 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCe-EEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~-VlvlEkG~~ 80 (539)
.++||||||+|++|+++|..|++ |.+ |+||||.+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 46899999999999999999999 999 999999864
No 96
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.33 E-value=2.1e-06 Score=94.11 Aligned_cols=36 Identities=33% Similarity=0.419 Sum_probs=33.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
..+||+|||+|++|+++|+.|++ |.+|+|||+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 36899999999999999999999 9999999998754
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.33 E-value=9.9e-07 Score=93.26 Aligned_cols=36 Identities=33% Similarity=0.446 Sum_probs=33.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..++||||||+|++|+.+|.+|++ |.+|+|||+++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999875
No 98
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.33 E-value=1.4e-06 Score=92.51 Aligned_cols=35 Identities=31% Similarity=0.570 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999864
No 99
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.32 E-value=1.9e-06 Score=89.47 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-----CeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-N-----ASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G-----~~VlvlEkG~~ 80 (539)
..|||||||+|++|+++|..|++ | .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCC
Confidence 46899999999999999999999 8 99999999875
No 100
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.31 E-value=2e-06 Score=89.64 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=32.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-C--CeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G--~~VlvlEkG~~~ 81 (539)
.+||+|||+|.+|+++|++|++ | .+|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 5899999999999999999999 9 999999997653
No 101
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.31 E-value=1.6e-06 Score=89.96 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCe---EEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ----NAS---VLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~----G~~---VlvlEkG~~ 80 (539)
+||+|||+|++|+++|..|++ |.+ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCC
Confidence 699999999999999999976 788 999999865
No 102
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.23 E-value=2.7e-06 Score=83.16 Aligned_cols=31 Identities=32% Similarity=0.622 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG 78 (539)
|||+|||+|++|+++|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999999 99 99999996
No 103
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.22 E-value=3.1e-06 Score=86.13 Aligned_cols=62 Identities=15% Similarity=0.275 Sum_probs=48.5
Q ss_pred hhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 219 LEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 219 l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
....++.|+++++++.|++|..+++ ++.+|+.. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--L-----PCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECcCCccCHHHHHhCCCC
Confidence 3355678999999999999987765 78888764 5653 3 379999999988777787777764
No 104
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.22 E-value=3.4e-06 Score=91.09 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=33.5
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~ 80 (539)
+..++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 29 ~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 29 VPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 3457999999999999999999998 899999999864
No 105
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.21 E-value=7.6e-07 Score=92.17 Aligned_cols=40 Identities=35% Similarity=0.501 Sum_probs=36.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 83 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~ 83 (539)
++.++||||||+|.+|+++|..|++ |++|+||||.+...+
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4567999999999999999999999 999999999987543
No 106
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.20 E-value=5.9e-07 Score=88.74 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=32.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
..++||+|||+|++|++||++|++ |++|+|+||++.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 347899999999999999999974 899999999875
No 107
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.17 E-value=6.3e-07 Score=94.34 Aligned_cols=34 Identities=41% Similarity=0.674 Sum_probs=31.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||||||+|++|.++|.++++ |.||+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5999999999999999999999 999999998753
No 108
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.14 E-value=7.8e-07 Score=93.56 Aligned_cols=37 Identities=30% Similarity=0.483 Sum_probs=33.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPY 82 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~ 82 (539)
..+||||||||++|++||++|++ |.+|+|||+.+...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 36999999999999999999987 89999999998754
No 109
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.07 E-value=1.4e-06 Score=89.37 Aligned_cols=33 Identities=48% Similarity=0.793 Sum_probs=31.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|||||||+|++|+++|++|++ |.+|+|||+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 799999999999999999999 999999999765
No 110
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.05 E-value=2.1e-06 Score=90.35 Aligned_cols=45 Identities=29% Similarity=0.441 Sum_probs=35.3
Q ss_pred cccccccCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 35 FMRNATAAKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 35 ~~~~~~~~~~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|......++..+|||||||+|++|+++|.+|++ |.+|+|+||.+
T Consensus 20 ~m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 20 HMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp ------CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 3444444555668999999999999999999999 99999999975
No 111
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.05 E-value=1.3e-06 Score=91.22 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=31.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.+|||||||+|++|+++|++|++ |.+|+||||+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 46999999999999999999999 9999999994
No 112
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.04 E-value=1.3e-05 Score=84.50 Aligned_cols=35 Identities=34% Similarity=0.541 Sum_probs=31.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-------------CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-------------NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-------------G~~VlvlEkG~~ 80 (539)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999986 689999999754
No 113
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.02 E-value=2.6e-06 Score=85.40 Aligned_cols=37 Identities=30% Similarity=0.308 Sum_probs=34.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|..++||||||+|.+|+++|++|++ |.+|+||||...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4567999999999999999999999 999999999864
No 114
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.00 E-value=2.3e-06 Score=89.12 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++|||+|||+|++|+++|++|++ |.+|+|+||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 46999999999999999999999 999999999874
No 115
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.99 E-value=2.2e-06 Score=88.91 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=31.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.+|||||||+|++|+++|++|++ |.+|+||||+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999 9999999994
No 116
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.97 E-value=1.9e-06 Score=90.14 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+|||||||+|++|+++|.+|++ |.+|+|+||++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 117
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.96 E-value=1.4e-05 Score=84.08 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=30.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
...|||+|||+|++|+++|..|++ |.+|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 457999999999999999999999 999999986
No 118
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.96 E-value=3.9e-05 Score=80.55 Aligned_cols=34 Identities=35% Similarity=0.563 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
.+||||||||++|+++|+.|++ |.+|+||||.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999987 689999999764
No 119
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.95 E-value=4.9e-06 Score=83.87 Aligned_cols=38 Identities=32% Similarity=0.583 Sum_probs=34.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
+...+||+|||+|++|+++|++|++ |.+|+|||+.+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 3457999999999999999999999 9999999998754
No 120
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.94 E-value=3.1e-05 Score=80.63 Aligned_cols=34 Identities=38% Similarity=0.719 Sum_probs=30.7
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.+||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 3699999999999999999998 689999999864
No 121
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.94 E-value=5.2e-06 Score=84.32 Aligned_cols=39 Identities=28% Similarity=0.437 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc--CCeEEEEcCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPY 82 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~~~~ 82 (539)
|.+++||+|||+|.+|+++|++|++ |.+|+|||+.+...
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4557999999999999999999998 79999999987643
No 122
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.92 E-value=2.3e-06 Score=89.18 Aligned_cols=35 Identities=37% Similarity=0.657 Sum_probs=32.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
..+|||||||+|++|+++|.+|++ |.+|+|+||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 446999999999999999999999 99999999874
No 123
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.91 E-value=6e-06 Score=82.83 Aligned_cols=35 Identities=37% Similarity=0.688 Sum_probs=32.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
++||+|||+|.+|+++|++|++ |.+|+|+|+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 3799999999999999999999 9999999998753
No 124
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.89 E-value=3.8e-06 Score=87.11 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=32.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 356999999999999999999999 99999999974
No 125
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.89 E-value=3.7e-06 Score=86.87 Aligned_cols=35 Identities=31% Similarity=0.571 Sum_probs=32.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+++|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 346999999999999999999999 99999999974
No 126
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.89 E-value=4.6e-06 Score=86.66 Aligned_cols=35 Identities=34% Similarity=0.400 Sum_probs=32.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+.++||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457999999999999999999999 99999999984
No 127
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.88 E-value=5.2e-06 Score=82.68 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=30.3
Q ss_pred cEEEECCCcchHHHHHhhhc-C------CeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N------ASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G------~~VlvlEkG~~ 80 (539)
||||||+|.+|+++|++|++ | .+|+||||+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 89999999999999999999 9 89999999863
No 128
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.87 E-value=5.8e-06 Score=87.11 Aligned_cols=37 Identities=32% Similarity=0.505 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
..++||||||||.+|+++|++|++ |.+|+|||+.+..
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 346899999999999999999999 9999999998764
No 129
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.86 E-value=7.5e-06 Score=83.11 Aligned_cols=37 Identities=32% Similarity=0.481 Sum_probs=33.9
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+..++||+|||+|++|+++|+.|++ |.+|+|+||.+.
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3457999999999999999999999 999999999864
No 130
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.85 E-value=8.2e-06 Score=85.24 Aligned_cols=39 Identities=33% Similarity=0.426 Sum_probs=34.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 83 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~ 83 (539)
.+.+||+|||+|++|+++|++|++ |.+|+|+|+.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 446899999999999999999999 999999999986543
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.85 E-value=4.5e-06 Score=87.01 Aligned_cols=34 Identities=41% Similarity=0.696 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+|||||||+|++|+++|.+|++ |.+|+|+||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46999999999999999999999 99999999974
No 132
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.84 E-value=9e-06 Score=83.21 Aligned_cols=38 Identities=29% Similarity=0.311 Sum_probs=34.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEcCCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPY 82 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~~~~ 82 (539)
.+++||+|||+|++|+++|++|++ | .+|+|+|+.+...
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 346899999999999999999999 9 8999999987643
No 133
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.84 E-value=5e-05 Score=78.88 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=29.4
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
..||+|||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 3689999999999999999998 689999999875
No 134
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.84 E-value=6.5e-06 Score=86.00 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=32.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+.+|||||||+|++|+++|.+|++ |.+|+||||.+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~ 40 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEP 40 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 346999999999999999999999 999999998643
No 135
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.83 E-value=9.2e-06 Score=83.43 Aligned_cols=40 Identities=33% Similarity=0.448 Sum_probs=35.9
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 83 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~ 83 (539)
|+.++||||||+|.+|+++|.+|++ |.+|+|+|+.+...+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 4567999999999999999999999 999999999876543
No 136
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.83 E-value=7.9e-06 Score=85.04 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=32.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 82 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~ 82 (539)
....+||||||+|.+|+++|+.|++ |.+|+|||+.+...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 3457899999999999999999999 99999999987643
No 137
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.83 E-value=7.2e-06 Score=85.84 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=28.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++.|||||||+|++|+++|..|.+ |...+++|+...
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~ 73 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNI 73 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC---
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEecccc
Confidence 456999999999999999999988 776666776653
No 138
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.81 E-value=6.3e-06 Score=85.46 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=32.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-C------CeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-N------ASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G------~~VlvlEkG~~~ 81 (539)
.+||+|||+|.+|+++|++|++ | .+|+|||+.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 5899999999999999999999 9 999999998654
No 139
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.81 E-value=5.1e-05 Score=81.12 Aligned_cols=35 Identities=29% Similarity=0.603 Sum_probs=31.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
...||+|||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 35799999999999999999998 579999999875
No 140
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.79 E-value=1.2e-05 Score=80.30 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=33.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC-CC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG-DS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG-~~ 80 (539)
...+||+|||+|++|+++|++|++ |.+|+|+|+. +.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 456899999999999999999999 9999999998 54
No 141
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.78 E-value=7.7e-06 Score=86.09 Aligned_cols=37 Identities=35% Similarity=0.442 Sum_probs=33.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-CeEEEEcCCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPY 82 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~~~~ 82 (539)
.++||||||||.+|++||++|++ | .+|+|||+.+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 35899999999999999999999 9 9999999987644
No 142
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.78 E-value=1.2e-05 Score=83.79 Aligned_cols=35 Identities=40% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
..+|||||||+|++|+++|.+|++ |.+|+||||+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 457999999999999999999999 99999999754
No 143
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=8.6e-06 Score=85.32 Aligned_cols=33 Identities=45% Similarity=0.738 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999 99999999985
No 144
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.75 E-value=5.3e-05 Score=79.08 Aligned_cols=34 Identities=38% Similarity=0.478 Sum_probs=31.2
Q ss_pred CccEEEECCCcchHHHHHhhhcCCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQNASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~G~~VlvlEkG~~ 80 (539)
.+||+|||+|++|+++|++|++-.+|+|||+++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~ 141 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGW 141 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCC
Confidence 5899999999999999999987689999999875
No 145
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.75 E-value=1.3e-05 Score=80.63 Aligned_cols=35 Identities=34% Similarity=0.315 Sum_probs=32.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
.+||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 5899999999999999999999 9999999998753
No 146
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.74 E-value=1.5e-05 Score=83.52 Aligned_cols=39 Identities=26% Similarity=0.234 Sum_probs=33.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 82 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~ 82 (539)
|.+.+||+|||+|.+|+++|++|++ |.+|+|+|+.+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 3456899999999999999999999 99999999997653
No 147
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.74 E-value=1e-05 Score=83.66 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=33.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 82 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~ 82 (539)
.++||||||+|++|+++|++|++ |.+|+|||+.+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 36899999999999999999999 99999999987643
No 148
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.74 E-value=9.6e-06 Score=84.55 Aligned_cols=37 Identities=30% Similarity=0.511 Sum_probs=33.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|+.+|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3446999999999999999999999 999999999754
No 149
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.73 E-value=1.5e-05 Score=82.97 Aligned_cols=34 Identities=29% Similarity=0.511 Sum_probs=31.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~~~ 81 (539)
+||+|||||.+|+++|++|++ |. +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 699999999999999999999 98 99999998753
No 150
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.73 E-value=0.00011 Score=75.86 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 589999999999999999998 689999999875
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.73 E-value=9.4e-05 Score=76.22 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 389999999999999999998 689999999864
No 152
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.71 E-value=1.4e-05 Score=83.62 Aligned_cols=37 Identities=38% Similarity=0.482 Sum_probs=33.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 82 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~ 82 (539)
+++||+|||+|.+|+++|++|++ |.+|+|||+.+...
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 34899999999999999999999 99999999987643
No 153
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.69 E-value=1e-05 Score=84.22 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=32.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 346999999999999999999999 999999999654
No 154
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.69 E-value=1.5e-05 Score=78.37 Aligned_cols=34 Identities=41% Similarity=0.693 Sum_probs=32.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
...+||+|||+|++|+++|..|++ |.+|+|||+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 446999999999999999999999 9999999998
No 155
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.69 E-value=1.7e-05 Score=82.44 Aligned_cols=34 Identities=29% Similarity=0.498 Sum_probs=32.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||+|||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999864
No 156
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=1.3e-05 Score=83.00 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=31.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.+|||||||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 36999999999999999999999 9999999994
No 157
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.65 E-value=1.9e-05 Score=81.64 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=31.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4899999999999999999999 999999999864
No 158
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.62 E-value=2.3e-05 Score=75.70 Aligned_cols=34 Identities=35% Similarity=0.670 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|||+|||+|++|+++|..|++ |.+|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 4899999999999999999999 999999999763
No 159
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.62 E-value=1.8e-05 Score=81.12 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=31.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+||+|||+|++|+++|+.|++ |.+|+||||.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999 99999999986
No 160
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.62 E-value=1.6e-05 Score=83.16 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=31.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc--CCeEEEEcCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERG 78 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEkG 78 (539)
|..+|||||||+|++|+++|++|++ |.+|+|+|+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecc
Confidence 4457999999999999999999998 9999999953
No 161
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=2.7e-05 Score=80.91 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+.+|||+|||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 346999999999999999999999 999999999864
No 162
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.61 E-value=1.8e-05 Score=82.07 Aligned_cols=33 Identities=42% Similarity=0.628 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+|||||||+|++|+++|.+|++ |.+|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 163
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.61 E-value=2.1e-05 Score=81.72 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.+|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999864
No 164
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.61 E-value=2.6e-05 Score=69.46 Aligned_cols=32 Identities=41% Similarity=0.719 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|||+|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 165
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.61 E-value=2.2e-05 Score=81.24 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
+|||||||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899999999999999999999 9999999997
No 166
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.60 E-value=3.7e-05 Score=77.55 Aligned_cols=35 Identities=17% Similarity=0.424 Sum_probs=32.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
++||+|||+|.+|+++|++|++ |.+|+|+|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 4799999999999999999999 9999999998754
No 167
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.60 E-value=3.3e-05 Score=80.50 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=33.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~~~ 81 (539)
...+||+|||+|++|+++|++|++ | .+|+|+|+.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 346899999999999999999999 8 799999998754
No 168
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.59 E-value=0.00017 Score=72.69 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+.-|+|||+|++|+.+|..|.. +.+|+|+|+.+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 4569999999999999999977 899999999875
No 169
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.58 E-value=2.1e-05 Score=82.07 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=29.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEcC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLER 77 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~--G~~VlvlEk 77 (539)
.+|||+|||+|++|+++|++|++ |.+|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 36999999999999999999998 999999995
No 170
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.56 E-value=2.2e-05 Score=81.39 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
+|||+|||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999 9999999997
No 171
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.55 E-value=4.2e-05 Score=80.03 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=33.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
...+||+|||+|++|+++|+.|++ |.+|+|||+.+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 346899999999999999999999 9999999998754
No 172
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.55 E-value=0.00016 Score=73.49 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.4
Q ss_pred cEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 79999999999999999987 689999999863
No 173
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.51 E-value=4.4e-05 Score=75.50 Aligned_cols=33 Identities=30% Similarity=0.320 Sum_probs=31.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
+||||||+|.+|+.+|+.|++ |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 699999999999999999999 999999999875
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.51 E-value=0.0002 Score=76.03 Aligned_cols=33 Identities=30% Similarity=0.598 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.||+|||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 379999999999999999998 579999999875
No 175
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.50 E-value=0.00021 Score=73.36 Aligned_cols=31 Identities=16% Similarity=0.521 Sum_probs=28.4
Q ss_pred EEEECCCcchHHHHHhhhc-C--CeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G--~~VlvlEkG~~ 80 (539)
|||||+|+||+++|.+|++ | .+|+|+|+.+.
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 8999999999999999999 7 57999999864
No 176
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.50 E-value=2.9e-05 Score=76.00 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
..+||+|||+|++|+++|..|++ |.+|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 35899999999999999999999 9999999975
No 177
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.46 E-value=5.3e-05 Score=73.74 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=29.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
+|||+|||+|++|+++|..|++ |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999986
No 178
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.46 E-value=4.1e-05 Score=75.60 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
...+||+|||+|++|+++|..|++ |.+|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 456999999999999999999999 9999999975
No 179
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.43 E-value=8.3e-05 Score=80.99 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.9
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
....+||+|||+|++|+++|+.|++ |.+|+|+|+++.
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~ 425 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD 425 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3457899999999999999999999 999999999875
No 180
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.40 E-value=0.0001 Score=75.95 Aligned_cols=35 Identities=31% Similarity=0.310 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+||+|||||++|+++|..|++ |.+|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 46899999999999999999999 999999999875
No 181
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.39 E-value=7.2e-05 Score=77.66 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
..+||+|||+|++|+++|++|++ |. +|+|+|+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 46899999999999999999999 98 89999998764
No 182
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.35 E-value=9.7e-05 Score=74.83 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=30.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 49999999999999999999 999999999765
No 183
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.33 E-value=6.4e-05 Score=73.96 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=30.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
.+||+|||+|++|+++|+.|++ |.+|+|+|+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 5899999999999999999999 999999998
No 184
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.33 E-value=0.00013 Score=77.54 Aligned_cols=41 Identities=34% Similarity=0.365 Sum_probs=36.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCCCC
Q 009241 44 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGN 84 (539)
Q Consensus 44 ~~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~~~ 84 (539)
+..+|||||||+|..|+++|..|++ |.+||+|||.+...++
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 3457999999999999999999999 9999999999876543
No 185
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.33 E-value=7.8e-05 Score=77.98 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=30.5
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~ 79 (539)
+|||||||+|++|+++|++|++ |.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 57999999986
No 186
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.30 E-value=0.00011 Score=77.56 Aligned_cols=36 Identities=33% Similarity=0.586 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDSP 81 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~~ 81 (539)
..+||||||+|++|+++|+.|++ |.+|+|||+....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 35899999999999999999987 6899999997643
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.29 E-value=0.00012 Score=73.64 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=42.9
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 218 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 218 ~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
+...+++.|++++++++|++|..+++ . ..|+. .+|+. + .++.||+|+|...+..++..+|+
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~--~~g~~--i-----~~d~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGE-----G-LEAHL--SDGEV--I-----PCDLVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCC-----E-EEEEE--CCCCE--E-----ECCEEEECcCCCcCHHHHHHCCC
Confidence 34455678999999999999987654 2 23333 35643 3 26999999998777667666665
No 188
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.25 E-value=0.00015 Score=74.31 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=45.0
Q ss_pred hhcCCCCcEEEcCcEEEEEEe--cCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 220 EYANPSGLTVLLHASVHKILF--RNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 220 ~~~~~~gv~i~~~t~V~~l~~--~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
..+++.|++++++++|++|.. +++ ++.+|... +|+. + .++.||+|+|...+..++..+|+.
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i-----~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--L-----PADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCCcCcchhhccCCC
Confidence 355667999999999999986 333 67777654 5643 3 379999999987666777766653
No 189
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.25 E-value=0.00012 Score=78.48 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
...|||+|||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 456999999999999999999999 9999999984
No 190
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.20 E-value=0.00016 Score=72.75 Aligned_cols=32 Identities=34% Similarity=0.540 Sum_probs=30.0
Q ss_pred cEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
||||||+|++|+++|+.|++ |.+|+|+||.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 89999999999999999997 799999999865
No 191
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.20 E-value=0.00022 Score=77.15 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=33.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
...+||+|||+|++|+++|+.|++ |.+|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 456899999999999999999999 9999999998754
No 192
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.18 E-value=0.0002 Score=75.74 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=31.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
..+||||||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999998 589999999764
No 193
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.12 E-value=0.0017 Score=65.18 Aligned_cols=33 Identities=21% Similarity=0.447 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 469999999999999999999 999999999864
No 194
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.11 E-value=0.00028 Score=76.64 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
...+||+|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 346899999999999999999999 9999999998753
No 195
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.11 E-value=0.00027 Score=77.38 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 446899999999999999999999 999999999875
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.10 E-value=0.00025 Score=70.95 Aligned_cols=33 Identities=30% Similarity=0.580 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
.||+|||+|++|+++|.+|++ | +|+|+|+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 689999999999999999999 9 99999998753
No 197
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.07 E-value=0.00032 Score=73.11 Aligned_cols=34 Identities=12% Similarity=0.317 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-C---CeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-N---ASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G---~~VlvlEkG~~ 80 (539)
++||||||+|++|+++|.+|++ | .+|+|+|+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 5899999999999999999999 8 99999999874
No 198
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.05 E-value=0.00036 Score=77.03 Aligned_cols=38 Identities=32% Similarity=0.346 Sum_probs=34.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 82 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~~ 82 (539)
...+||+|||+|++|+++|+.|++ |.+|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 446899999999999999999999 99999999987643
No 199
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.05 E-value=0.00023 Score=76.96 Aligned_cols=34 Identities=29% Similarity=0.595 Sum_probs=31.6
Q ss_pred CccEEEECCCcchHHHHHhhhc------CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ------NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~------G~~VlvlEkG~~ 80 (539)
++||+|||+|++|+++|..|++ |.+|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 6899999999999999999987 899999999864
No 200
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.05 E-value=0.00026 Score=79.92 Aligned_cols=34 Identities=35% Similarity=0.516 Sum_probs=32.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 5899999999999999999999 999999999875
No 201
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.04 E-value=0.0026 Score=63.17 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=42.0
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhc
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLS 291 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~S 291 (539)
+.|++++++++|++|..+++ ++.+|.+...+|+...+. ++.||+|+|.-.+..+|...
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 271 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARW 271 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGS
T ss_pred cCceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhh
Confidence 35899999999999987765 788888764466544443 79999999965444444433
No 202
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.95 E-value=0.00038 Score=70.69 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC--eEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~~ 80 (539)
.++||+|||+|++|+++|.+|++ |. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 46899999999999999999999 86 5999999875
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.95 E-value=0.0031 Score=61.27 Aligned_cols=56 Identities=13% Similarity=0.171 Sum_probs=41.2
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-C-CCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 223 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-T-DAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 223 ~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~-g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
++.|++++++++|++|..+++ ++.+|.+.+. + |+...+. ++.||+|+|.-.++.++
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGG
T ss_pred ccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHh
Confidence 357899999999999987665 7888988752 2 5444443 79999999976555443
No 204
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.93 E-value=0.00038 Score=71.76 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
+||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 589999999999999999998 789999999874
No 205
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.91 E-value=0.00041 Score=72.30 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=43.5
Q ss_pred hhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 219 LEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 219 l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
....++.|+++++++.|++|..+++ ++ .|+. .+|+. + .++.||+|+|...+..++..+|+.
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i-----~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--V-----ETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--E-----EESEEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--E-----ECCEEEECCCCCccHHHHHHcCCc
Confidence 3455678999999999999986544 33 4443 35643 3 369999999987776677666653
No 206
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.90 E-value=0.004 Score=60.19 Aligned_cols=54 Identities=20% Similarity=0.286 Sum_probs=40.7
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 225 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 225 ~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
.|++++++++|++|..+++ ++.+|++.+ .+|+...+. ++.||+|+|...++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 5899999999999986654 788998876 246544553 79999999976555444
No 207
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.88 E-value=0.0005 Score=70.73 Aligned_cols=35 Identities=26% Similarity=0.423 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~~ 81 (539)
.+||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 4799999999999999999998 5799999999854
No 208
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.77 E-value=0.003 Score=65.17 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 209
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.75 E-value=0.00063 Score=77.30 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
..+||+|||||++|+++|..|++ |. +|+|+|+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 35899999999999999999999 98 7999999764
No 210
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.73 E-value=0.00078 Score=69.44 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C--CeEEEEcCCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSP 81 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G--~~VlvlEkG~~~ 81 (539)
..+||+|||+|++|+.+|..|++ | .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 35899999999999999999999 8 999999998764
No 211
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.70 E-value=0.0097 Score=57.45 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=41.2
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHHH
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 289 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl 289 (539)
+.|+++++++.|++|..+++ ++.+|.+.+ .+|+...+. ++.||+|+|...+..+|.
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~ 247 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLK 247 (311)
T ss_dssp CTTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGB
T ss_pred CCCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhh
Confidence 36899999999999987655 777888874 256544453 799999999765555543
No 212
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.65 E-value=0.00091 Score=68.37 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~~ 81 (539)
.||+|||+|++|+++|.+|++ |.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999998 5899999998753
No 213
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.65 E-value=0.0012 Score=67.69 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~~ 81 (539)
..||||||+|++|+++|..|++ |.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 3689999999999999999987 6899999998753
No 214
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.57 E-value=0.001 Score=68.54 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhhc--------CCeEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ--------NASVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~--------G~~VlvlEkG~~~ 81 (539)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5899999999999999999987 7899999998754
No 215
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.51 E-value=0.0045 Score=62.76 Aligned_cols=56 Identities=18% Similarity=0.146 Sum_probs=41.6
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCCC
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 294 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGig 294 (539)
+.|+++++++.|++|..++ ++.+|+.. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 197 ~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 197 ELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--F-----VADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTTCC
T ss_pred HCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--E-----EcCEEEEeeCCeecHHHHHhCCCc
Confidence 4688999999999987543 45566654 5653 3 379999999988877787777664
No 216
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.45 E-value=0.021 Score=58.22 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 369999999999999999999 999999999864
No 217
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.42 E-value=0.0014 Score=66.50 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCe--EEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NAS--VLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~--VlvlEkG~~~ 81 (539)
.||+|||+|++|+++|..|++ |.+ |+|+|+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 489999999999999999999 865 9999998753
No 218
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.40 E-value=0.027 Score=57.83 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=30.2
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~ 80 (539)
.-.|+|||+|..|+-+|..|++ +.+|.++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 3579999999999999999988 579999999875
No 219
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.40 E-value=0.0059 Score=63.19 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 469999999999999999999 999999999874
No 220
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.32 E-value=0.019 Score=58.96 Aligned_cols=33 Identities=36% Similarity=0.543 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|.+|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 469999999999999999999 999999999864
No 221
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.29 E-value=0.0023 Score=66.74 Aligned_cols=35 Identities=9% Similarity=0.214 Sum_probs=31.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 46 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 46 ~~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
++..|||||+|+||+.+|.+|++ +.+|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 34679999999999999999999 999999999875
No 222
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.29 E-value=0.0017 Score=69.93 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=31.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-C--------CeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-N--------ASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G--------~~VlvlEkG~ 79 (539)
..+|+|||+|++|+++|++|++ | .+|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 4789999999999999999999 8 9999999987
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.28 E-value=0.008 Score=61.76 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 479999999999999999999 999999999864
No 224
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.25 E-value=0.017 Score=60.45 Aligned_cols=54 Identities=20% Similarity=0.304 Sum_probs=41.1
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 225 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 225 ~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
.|+++++++.|++|..+++ ++.+|.+.+ .+|+...+. ++.||+|+|...+..+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 5899999999999986654 888999886 346555554 79999999976554443
No 225
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.21 E-value=0.014 Score=60.61 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 369999999999999999999 999999999874
No 226
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.19 E-value=0.023 Score=55.47 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 369999999999999999999 999999999763
No 227
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.16 E-value=0.0026 Score=64.20 Aligned_cols=32 Identities=31% Similarity=0.557 Sum_probs=28.8
Q ss_pred EEEECCCcchHHHHHhhhc-C--CeEEEEcCCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSP 81 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G--~~VlvlEkG~~~ 81 (539)
|||||+|+||+++|.+|++ + .+|+|||+.+..
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY 39 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC
Confidence 9999999999999999988 5 699999998753
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.13 E-value=0.03 Score=54.32 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=39.0
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHH
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQL 287 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~l 287 (539)
+.|++++++++|++|..+ + ++.+|.+.+ .+|+...+. ++.||+|+|.-.+..+
T Consensus 200 ~~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~ 253 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAF 253 (325)
T ss_dssp CTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGG
T ss_pred cCCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHH
Confidence 358999999999999864 3 678888875 256544454 7999999996554444
No 229
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.12 E-value=0.035 Score=53.99 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=40.8
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
+.|++++++++|++|..++++ .++.+|.+.+. +|+...+. ++.||+|+|.-.+..++
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKFL 264 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHHh
Confidence 568999999999999865431 25777888753 46544443 79999999976555443
No 230
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.10 E-value=0.015 Score=60.04 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 369999999999999999999 999999999864
No 231
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.02 E-value=0.019 Score=59.65 Aligned_cols=33 Identities=33% Similarity=0.501 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 369999999999999999999 999999999864
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.98 E-value=0.0088 Score=61.95 Aligned_cols=33 Identities=33% Similarity=0.618 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 579999999999999999999 999999999863
No 233
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.0092 Score=61.75 Aligned_cols=32 Identities=28% Similarity=0.523 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 59999999999999999999 999999999864
No 234
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.90 E-value=0.02 Score=58.95 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=29.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 69999999999999999999 999999999864
No 235
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.71 E-value=0.094 Score=53.93 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=40.1
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
+.|++++++++|++|..+++ ++. |... +|+. + .++.||+|+|...+..++..+|+
T Consensus 214 ~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 214 KNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKRT--L-----DADLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSCE--E-----ECSEEEECSCEEECCHHHHHHTC
T ss_pred hcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCCE--E-----EcCEEEECCCCCcCHHHHHhCCc
Confidence 46899999999999987554 555 4444 5643 3 37999999998777667666665
No 236
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.70 E-value=0.05 Score=56.08 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 369999999999999999999 999999999864
No 237
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.60 E-value=0.0061 Score=62.18 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=40.7
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 221 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 221 ~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
..++.|+++++++.|+++. ++ ++.+.+.+|...++. ++.||+++|.-. +.++..++.
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i~-----~d~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEVP-----AKFTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEEE-----CSEEEEECEEEC-CHHHHTTCT
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEee-----cceEEEeccCCC-chHHHhccc
Confidence 5567899999999999974 33 345566567665664 899999999654 456666653
No 238
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.58 E-value=0.018 Score=59.88 Aligned_cols=33 Identities=21% Similarity=0.455 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 368999999999999999998 999999998764
No 239
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.53 E-value=0.045 Score=56.33 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 240
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.47 E-value=0.1 Score=53.76 Aligned_cols=33 Identities=33% Similarity=0.391 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 369999999999999999999 999999999864
No 241
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.41 E-value=0.039 Score=53.53 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 369999999999999999999 999999998753
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.35 E-value=0.062 Score=56.69 Aligned_cols=32 Identities=34% Similarity=0.501 Sum_probs=30.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|+|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 69999999999999999999 999999999864
No 243
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.29 E-value=0.022 Score=58.92 Aligned_cols=33 Identities=30% Similarity=0.555 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 369999999999999999999 999999999864
No 244
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.18 E-value=0.1 Score=55.36 Aligned_cols=32 Identities=31% Similarity=0.519 Sum_probs=29.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 69999999999999999999 999999999864
No 245
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.91 E-value=0.079 Score=54.19 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 359999999999999999999 999999999864
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.87 E-value=0.12 Score=53.39 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=37.5
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCC-CCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~-g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
+.|+++++++.|++|..++++ ++ .|.+.+.. ++...+. ++.||+|+|.-.+..+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~----~~-~v~~~~~~~~~~~~~~-----~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG----KL-LVKYKNVETGEESEDV-----YDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS----CE-EEEEEETTTCCEEEEE-----ESEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC----cE-EEEEecCCCCceeEEE-----cCEEEECcccccCcCcC
Confidence 468889999999999876552 33 46666532 4444443 79999999976555544
No 247
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.78 E-value=0.13 Score=53.24 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=27.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|||+|..|+-+|..|++ |.+|.++|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 58999999999999999999 99999998753
No 248
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.57 E-value=0.041 Score=56.55 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 469999999999999999999 999999999763
No 249
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.09 E-value=0.048 Score=55.75 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
..+++|||+|++|+-+|..|++ |.+|.|+|+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 4689999999999999999999 999999999875
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.89 E-value=0.068 Score=51.49 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=30.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 59999999999999999999 999999999875
No 251
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.85 E-value=0.32 Score=54.71 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCcEEEcCcEEEEEEec-CCCCCCCeEEEEEEEe--C---CCCeEEEEeccCCCCeEEEcCCCcccHHHHHhc
Q 009241 225 SGLTVLLHASVHKILFR-NKGKARPVAHGVVFRD--A---TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLS 291 (539)
Q Consensus 225 ~gv~i~~~t~V~~l~~~-~~~~~~~~v~gV~~~~--~---~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~S 291 (539)
.|+++++++.|++|..+ ++ ++.+|.+.+ . +|+...+ .++.||+|+|.--+..++...
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~-----~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~ 391 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENG-----ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQR 391 (965)
T ss_dssp TTCCEEETEEEEEEEECTTS-----CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHT
T ss_pred CCeEEEeCCEeEEEeccCCC-----CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhC
Confidence 57889999999999764 33 788888875 2 2433444 379999999987776776544
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.52 E-value=0.088 Score=44.14 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
=.|+|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999975
No 253
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.46 E-value=0.074 Score=45.48 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|+|||+|..|..+|..|.+ |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999 99999999865
No 254
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.41 E-value=0.3 Score=52.88 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=29.5
Q ss_pred cEEEEC--CCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIG--GGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVG--sG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|+||| +|..|+-+|..|++ |.+|.++|+.+.
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 599999 99999999999999 999999998764
No 255
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.41 E-value=0.074 Score=53.18 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=31.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
.|+|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 69999999999999999999 9999999999764
No 256
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.78 E-value=0.096 Score=53.68 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 369999999999999999999 999999999875
No 257
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.75 E-value=0.093 Score=43.89 Aligned_cols=31 Identities=35% Similarity=0.640 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|+|+|..|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 49999999999999999999 99999999864
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=91.65 E-value=0.12 Score=49.70 Aligned_cols=33 Identities=33% Similarity=0.556 Sum_probs=30.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 369999999999999999999 999999999764
No 259
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.37 E-value=0.12 Score=42.97 Aligned_cols=31 Identities=32% Similarity=0.500 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|+|||+|..|..+|..|.+ |.+|+++++.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999 99999999854
No 260
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.07 E-value=0.11 Score=51.45 Aligned_cols=33 Identities=39% Similarity=0.604 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 369999999999999999999 999999999875
No 261
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.62 E-value=0.14 Score=43.59 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|+|+|..|..+|..|.+ |.+|+++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999 99999999863
No 262
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=90.15 E-value=0.16 Score=51.76 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 369999999999999999999 999999999875
No 263
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.49 E-value=0.16 Score=40.61 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-C-CeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~ 79 (539)
.|+|+|+|..|..+|..|.+ | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 49999999999999999999 8 8999999864
No 264
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=89.19 E-value=0.21 Score=50.27 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 469999999999999999999 999999999875
No 265
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.80 E-value=0.19 Score=41.77 Aligned_cols=31 Identities=26% Similarity=0.464 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|+|+|+|..|..+|..|.+ |.+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999999864
No 266
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.64 E-value=0.24 Score=48.77 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|+|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 69999999999999999999 999999999875
No 267
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=88.52 E-value=0.25 Score=51.01 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 369999999999999999999 999999999875
No 268
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=88.41 E-value=0.26 Score=50.71 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999999875
No 269
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.30 E-value=0.28 Score=49.96 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCe-EEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~-VlvlEkG~~ 80 (539)
-.|+|||+|.+|+=+|..|++ |.+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 369999999999999999999 988 999999864
No 270
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=87.96 E-value=0.32 Score=49.85 Aligned_cols=32 Identities=9% Similarity=0.147 Sum_probs=30.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|+|||+|.+|+=+|..|++ |.+|.++++.+.
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 59999999999999999999 999999998764
No 271
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.90 E-value=0.35 Score=46.34 Aligned_cols=31 Identities=29% Similarity=0.549 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 39999999999999999999 99999999864
No 272
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.86 E-value=0.34 Score=50.16 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 369999999999999999999 999999999875
No 273
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=87.83 E-value=0.3 Score=50.00 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 369999999999999999999 999999999875
No 274
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.57 E-value=0.32 Score=49.37 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=30.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
.++|||+|..|+-+|..+++ |.+|.|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 69999999999999999999 9999999998753
No 275
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=87.53 E-value=0.45 Score=48.53 Aligned_cols=62 Identities=11% Similarity=0.111 Sum_probs=44.0
Q ss_pred ecCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEec--CCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCc
Q 009241 206 IDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFR--NKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 282 (539)
Q Consensus 206 ~~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~--~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~ 282 (539)
++.+|...-...+...++..|++|+++++|++|..+ ++ ++++|.. +|+. + .++.||+|+|.+
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~~--~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLGT--F-----KAPLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTEE--E-----ECSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCeE--E-----ECCEEEECCCcc
Confidence 345554433344555566779999999999999987 54 8888865 3532 3 379999999976
No 276
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=87.48 E-value=0.34 Score=50.67 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 469999999999999999999 999999999986
No 277
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.25 E-value=0.42 Score=46.07 Aligned_cols=31 Identities=29% Similarity=0.431 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+.|||+|..|...|..|++ |.+|.++.|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999999864
No 278
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=87.25 E-value=0.34 Score=50.75 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|+.|+-+|..|++ +.+|.|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 369999999999999999999 999999999985
No 279
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=87.14 E-value=0.33 Score=49.43 Aligned_cols=32 Identities=28% Similarity=0.658 Sum_probs=30.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 79999999999999999999 999999999875
No 280
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.96 E-value=0.31 Score=47.04 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..++. |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999999865
No 281
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.69 E-value=0.4 Score=46.35 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||+|..|+..|..|++ |.+|.++.|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999999864
No 282
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=86.61 E-value=0.42 Score=48.67 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=30.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 59999999999999999999 999999999875
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=86.39 E-value=0.37 Score=50.55 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 369999999999999999999 999999999985
No 284
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=86.32 E-value=0.47 Score=46.01 Aligned_cols=33 Identities=39% Similarity=0.521 Sum_probs=30.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|+-+|..|++ |.+|.++++.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.26 E-value=0.27 Score=44.56 Aligned_cols=30 Identities=30% Similarity=0.495 Sum_probs=28.4
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|+|||+|..|..+|..|.+ |.+|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999 99999999865
No 286
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.04 E-value=0.49 Score=42.98 Aligned_cols=30 Identities=23% Similarity=0.403 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
-|+|||+|..|...|..|.+ |.+|+|+...
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 59999999999999999999 9999999864
No 287
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=85.93 E-value=0.46 Score=48.62 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 369999999999999999999 999999999875
No 288
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=85.37 E-value=0.55 Score=45.09 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 369999999999999999999 999999999864
No 289
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=85.18 E-value=0.53 Score=39.40 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|||+|..|...|..|.+ |.+|.+.++.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 49999999999999999999 98899998864
No 290
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=84.88 E-value=0.61 Score=44.96 Aligned_cols=33 Identities=36% Similarity=0.605 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++++.+.
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 469999999999999999999 999999999875
No 291
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=84.85 E-value=0.55 Score=48.01 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 369999999999999999999 999999999875
No 292
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.80 E-value=0.85 Score=44.91 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=30.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
+.-|+|+|+|.+|..+|.-|.. |. +|.++++..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4569999999999999999999 98 999999975
No 293
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.54 E-value=0.57 Score=46.88 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 359999999999999999999 9999999998753
No 294
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=84.53 E-value=0.58 Score=48.00 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 369999999999999999999 999999999875
No 295
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=84.51 E-value=0.44 Score=48.24 Aligned_cols=63 Identities=16% Similarity=0.157 Sum_probs=44.0
Q ss_pred eecCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCc
Q 009241 205 IIDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 282 (539)
Q Consensus 205 ~~~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~ 282 (539)
+++..|...-...+...+++.|++|+++++|++|..+++ ++++|.. +|+. + .++.||+|+|..
T Consensus 227 ~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~~--~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 227 LYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGEV--A-----RCKQLICDPSYV 289 (433)
T ss_dssp EEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTEE--E-----ECSEEEECGGGC
T ss_pred EEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCeE--E-----ECCEEEECCCCC
Confidence 344555333333355555567999999999999998775 8888763 4543 3 379999999976
No 296
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.41 E-value=0.61 Score=43.29 Aligned_cols=33 Identities=21% Similarity=0.427 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
..|+|||+|..|..+|..|+. |. ++.|+++...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 469999999999999999999 96 8999998764
No 297
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.28 E-value=0.61 Score=46.84 Aligned_cols=34 Identities=38% Similarity=0.463 Sum_probs=31.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 359999999999999999999 9999999998764
No 298
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.09 E-value=0.89 Score=42.81 Aligned_cols=32 Identities=16% Similarity=0.068 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ | +|.++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 469999999999999999999 9 9999998864
No 299
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=83.98 E-value=0.46 Score=44.67 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|||+|-.|...|..|.+ |.+|+|++...
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 49999999999999999999 99999998643
No 300
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=83.86 E-value=0.54 Score=49.84 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.|+|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 59999999999999999999 9999999997
No 301
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.64 E-value=0.48 Score=45.19 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+.|||+|..|...|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 38999999999999999999 99999999874
No 302
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.53 E-value=0.78 Score=41.20 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=29.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.+.|||+|..|...|..|++ |.+|.++++.+.
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 49999999999999999999 999999988653
No 303
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=83.36 E-value=1.4 Score=46.63 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=45.6
Q ss_pred eeecCCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCC-CCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCC
Q 009241 204 TIIDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNK-GKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGA 281 (539)
Q Consensus 204 ~~~~~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~-~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~ 281 (539)
.++...|...-+..+.+.++..|.+|+++++|.+|+.+++ + +++||. ..+|+. +. ++.||..+..
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~--~~~Ge~--i~-----A~~VVs~~~~ 435 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVI--DQFGQR--II-----SKHFIIEDSY 435 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEE--ETTSCE--EE-----CSEEEEEGGG
T ss_pred eEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEE--eCCCCE--EE-----cCEEEEChhh
Confidence 4445556444444466667778999999999999998873 3 899987 336754 33 7888875553
No 304
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.04 E-value=0.64 Score=45.22 Aligned_cols=30 Identities=30% Similarity=0.544 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
-|.|||+|..|...|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999985
No 305
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.00 E-value=0.76 Score=43.39 Aligned_cols=30 Identities=23% Similarity=0.193 Sum_probs=28.3
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 8899999999999999999 99999999875
No 306
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.80 E-value=0.78 Score=45.61 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.-|+|||+|..|..+|..|.. |.+|+++++.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 459999999999999999988 999999998763
No 307
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.49 E-value=0.68 Score=48.31 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=29.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|||+|..|+=.|..++. |.+|.|+++...
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 59999999999999999999 999999998543
No 308
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.45 E-value=0.63 Score=40.66 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc--CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ--NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~--G~~VlvlEkG~ 79 (539)
.|+|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 59999999999999999976 88999999865
No 309
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.37 E-value=0.83 Score=43.24 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999 99999999865
No 310
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.21 E-value=0.58 Score=47.77 Aligned_cols=30 Identities=27% Similarity=0.589 Sum_probs=28.8
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+||+|+|-.|..+|..|++ |.+|+|+|+.+
T Consensus 6 iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 9999999999999999999 99999999975
No 311
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.91 E-value=1.2 Score=43.07 Aligned_cols=36 Identities=22% Similarity=0.574 Sum_probs=31.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSPY 82 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~~ 82 (539)
..-|+|||+|..|+.+|..|+. |. ++.|++......
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~ 71 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 71 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEecc
Confidence 3569999999999999999999 95 899999887543
No 312
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=81.79 E-value=0.84 Score=44.99 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
--|+|||+|..|..+|..|.. |.+|+++++.+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 459999999999999999999 999999998753
No 313
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=81.70 E-value=0.84 Score=47.45 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 469999999999999999999 999999999875
No 314
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=81.54 E-value=0.93 Score=43.24 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=31.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 469999999999999999999 9999999998754
No 315
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=81.18 E-value=0.93 Score=43.64 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 49999999999999999999 87 999999864
No 316
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=80.64 E-value=1.3 Score=42.75 Aligned_cols=31 Identities=29% Similarity=0.491 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |. +|.++++.+
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 49999999999999999999 98 999999865
No 317
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.46 E-value=0.97 Score=43.20 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 39999999999999999999 99999998854
No 318
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=80.40 E-value=0.86 Score=47.32 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 49999999999999999999 9999999985
No 319
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.29 E-value=0.77 Score=46.08 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=29.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.|||||.|-.|..+|..|.+ |.+|++||+.+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 49999999999999999999 999999998753
No 320
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=79.71 E-value=1.2 Score=42.21 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
-.++|||+|..|+-+|..|++ |.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 369999999999999999999 9999999998753
No 321
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=79.63 E-value=1 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=30.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
+.-|+|+|+|.+|..+|..|.. |. +|.|+++.+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGI 227 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 4569999999999999999999 97 8999999753
No 322
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=79.56 E-value=1.1 Score=44.82 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|+|||+|.+|..+|..|.. |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 359999999999999999988 99999999865
No 323
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.54 E-value=1 Score=43.38 Aligned_cols=29 Identities=24% Similarity=0.587 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.|.|||+|..|...|..|++ |.+|.++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 49999999999999999999 9999999 54
No 324
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=79.34 E-value=1.1 Score=45.62 Aligned_cols=31 Identities=35% Similarity=0.358 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+|+|..|..+|..|+. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 49999999999999999999 99999998864
No 325
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=79.19 E-value=1.1 Score=45.97 Aligned_cols=32 Identities=25% Similarity=0.463 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.-|.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 348999999999999999999 99999998864
No 326
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=79.08 E-value=1.4 Score=44.89 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|.+|+++|..|.+ |.+|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 49999999999999999999 99999999875
No 327
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=79.06 E-value=1.2 Score=41.86 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+|+|..|..+|..|++ |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 99999998764
No 328
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=79.05 E-value=1.3 Score=42.89 Aligned_cols=31 Identities=23% Similarity=0.481 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|+|||+|..|+-+|..|++ | +|.++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 469999999999999999999 8 799999874
No 329
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=78.89 E-value=1 Score=43.51 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38999999999999999999 99999999865
No 330
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=78.72 E-value=1.6 Score=40.49 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
.-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 569999999999999999999 85 8999988764
No 331
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.32 E-value=1.4 Score=41.72 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=30.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
..-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 4679999999999999999999 95 89999987653
No 332
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.27 E-value=1.3 Score=45.14 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|+++++.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999999865
No 333
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=78.23 E-value=0.95 Score=41.35 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|||+|..|..+|..|.+ |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 59999999999999999999 99 99999875
No 334
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=78.04 E-value=1.4 Score=44.83 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=36.9
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-------------CCCeEEEEeccCCCCeEEEcCCCcccH
Q 009241 224 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-------------TDAEHIAYLRNGPKNEIIVSAGALGSP 285 (539)
Q Consensus 224 ~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~-------------~g~~~~~~~~~~~a~~VVlAaG~~~sp 285 (539)
..|+++++++.+++|..++++ .++.+|++.+. +|+...+ .++.||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~---~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i-----~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDG---RRAAGIRLAVTRLEGIGEATRAVPTGDVEDL-----PCGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTS---SSEEEEEEEEEEEESSGGGCEEEEEEEEEEE-----ECSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCC---ceEEEEEEEEEEEccccCCCcccCCCceEEE-----EcCEEEECCCCCCCC
Confidence 478999999999998765321 15777776421 2433344 489999999976665
No 335
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.01 E-value=1.5 Score=44.38 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=28.0
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998864
No 336
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=77.74 E-value=1.3 Score=42.81 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=26.9
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
|.|||+|..|...|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999988
No 337
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=77.68 E-value=1.2 Score=43.68 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|+|+|+|.+|..+|..|.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999998 99999998864
No 338
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=77.63 E-value=1.4 Score=43.67 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|+|||+|..|..+|..|.. |.+|++.++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 459999999999999999988 999999998653
No 339
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.62 E-value=1.4 Score=43.11 Aligned_cols=31 Identities=35% Similarity=0.485 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999999 99999998864
No 340
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=77.58 E-value=1.2 Score=45.24 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=29.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
-.|+|||+|..|+=+|..|.+ |. +|.++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 369999999999999999888 87 6999999865
No 341
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.47 E-value=1.3 Score=43.77 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=28.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|+|+|+|..|..+|..|.. |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999 99999998864
No 342
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=77.37 E-value=1.5 Score=42.48 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. +|.++++..
T Consensus 11 kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 59999999999999999999 87 999999864
No 343
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.36 E-value=2.1 Score=40.69 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.|.|||.|..|...|..|++ |.+|.+.++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 459999999999999999999 999999998764
No 344
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=76.86 E-value=1.1 Score=45.17 Aligned_cols=35 Identities=11% Similarity=0.311 Sum_probs=25.3
Q ss_pred CCCccEEEECCCcchH-HHHHhhhc--CCeE-EEEcCCC
Q 009241 45 VSYYDYIVIGGGTAGC-PLAASLSQ--NASV-LLLERGD 79 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~-~aA~~La~--G~~V-lvlEkG~ 79 (539)
.+..-|.|||.|..|. ..+..|.+ +.++ .|.++.+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~ 119 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNA 119 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCH
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCH
Confidence 4457899999999996 67777776 5564 5666643
No 345
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.68 E-value=2.1 Score=43.37 Aligned_cols=31 Identities=29% Similarity=0.541 Sum_probs=29.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|++.++.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 49999999999999999999 99999999875
No 346
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=76.67 E-value=1.6 Score=38.93 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=27.7
Q ss_pred EEEEC-CCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVG-sG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+.||| +|..|...|..|++ |.+|.++++.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999 99999999999999 99999998864
No 347
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=76.54 E-value=1.7 Score=40.61 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
--++|||+|.+|.++|..|++ |.+|.|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 459999999999999999999 999999988753
No 348
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=76.49 E-value=2.3 Score=43.57 Aligned_cols=64 Identities=13% Similarity=0.116 Sum_probs=40.5
Q ss_pred CCCcccchhhhhhhcCCCC-cEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHH
Q 009241 208 QNSQRHTAADLLEYANPSG-LTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 286 (539)
Q Consensus 208 ~~g~r~~~~~~l~~~~~~g-v~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~ 286 (539)
.+|...-...+...+.+.| ++|+++++|++|..+++ . |.+...+|+. +. ++.||+|+|.-...+
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vI~a~~~~~l~~ 315 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--FV-----AKRVVCTIPLNVLST 315 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--EE-----EEEEEECCCGGGGGG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--EE-----cCEEEECCCHHHHhh
Confidence 3443332333445555566 99999999999987765 3 3344445643 32 689999999644433
No 349
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=76.33 E-value=1.4 Score=43.15 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||+|.-|.+.|..|++ |.+|.+..+.+
T Consensus 31 kI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 31 PIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999 99999998864
No 350
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=76.20 E-value=1.4 Score=45.54 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-C--------------CeEEEEcCCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N--------------ASVLLLERGDSP 81 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G--------------~~VlvlEkG~~~ 81 (539)
.++|||+|+.|+-+|..|++ + .+|.|+|+++..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 49999999999999988875 3 689999999863
No 351
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=76.14 E-value=1.6 Score=41.77 Aligned_cols=30 Identities=27% Similarity=0.450 Sum_probs=27.5
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
|.|||+|..|...|..|+. |. .|.++|+..
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 8899999999999999999 87 899999864
No 352
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=76.05 E-value=2.4 Score=44.16 Aligned_cols=34 Identities=21% Similarity=0.545 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
.-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 569999999999999999999 95 89999987654
No 353
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=75.93 E-value=1.8 Score=41.38 Aligned_cols=31 Identities=32% Similarity=0.394 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQNASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~G~~VlvlEkG~ 79 (539)
.+.|||+|..|+..|..|+.|.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999998778999999875
No 354
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=75.92 E-value=1.5 Score=43.42 Aligned_cols=32 Identities=38% Similarity=0.442 Sum_probs=28.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|+|||+|..|..+|..|.. |.+|+++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999998 99999998864
No 355
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=75.85 E-value=1.6 Score=44.41 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999999865
No 356
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=75.76 E-value=0.87 Score=46.50 Aligned_cols=66 Identities=17% Similarity=0.130 Sum_probs=42.9
Q ss_pred CCCcccchhhhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHH
Q 009241 208 QNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQL 287 (539)
Q Consensus 208 ~~g~r~~~~~~l~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~l 287 (539)
..|...-...+...+.+.|++|+++++|++|..+++ ++..|. . ++.. + .++.||+|++.....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~--~-~~~~--~-----~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVS--L-RDSS--L-----EADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG-----GCEEEE--C-SSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEE--E-CCeE--E-----EcCEEEECCCHHHHHHh
Confidence 455433333344555567999999999999998765 333443 3 3432 3 26999999998666655
Q ss_pred H
Q 009241 288 L 288 (539)
Q Consensus 288 L 288 (539)
|
T Consensus 295 l 295 (477)
T 3nks_A 295 L 295 (477)
T ss_dssp S
T ss_pred c
Confidence 3
No 357
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=75.38 E-value=1.8 Score=41.82 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. +|.+++...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 49999999999999999999 87 999999864
No 358
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=75.25 E-value=1.5 Score=43.16 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998864
No 359
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=74.97 E-value=1.2 Score=45.04 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=28.8
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|.|||.|.+|+++|..|++ |.+|.+.|....
T Consensus 8 v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 8 VVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp EEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 8999999999999999999 999999998764
No 360
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=74.95 E-value=1.6 Score=47.47 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=29.4
Q ss_pred cEEEEC--CCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIG--GGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVG--sG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|+||| +|..|+-+|..|++ |.+|.|+|+.+
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 699998 99999999999999 99999999987
No 361
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=74.91 E-value=2.2 Score=40.84 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999998865
No 362
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=74.64 E-value=2 Score=40.86 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=28.4
Q ss_pred cEEEEC-CCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVG-sG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.||| .|..|.+.|..|++ |.+|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 499999 99999999999999 99999998754
No 363
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=74.60 E-value=2.2 Score=40.32 Aligned_cols=31 Identities=32% Similarity=0.507 Sum_probs=28.7
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|.|||.|..|...|..|++ |.+|.+.++.+.
T Consensus 4 I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 4 YGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp EEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred EEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 8899999999999999999 999999988753
No 364
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=74.47 E-value=2.1 Score=40.79 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
.++|||+|.+|..+|..|++ |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999 97 999998864
No 365
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=74.24 E-value=1.9 Score=38.85 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999998864
No 366
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=74.19 E-value=2.1 Score=40.55 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+|+|..|..+|..|++ | +|.+..|..
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 49999999999999999999 9 999998753
No 367
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=73.93 E-value=2 Score=41.64 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=29.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+.-+.|||+|..|...|..|++ |.+|.++.+.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3459999999999999999999 99999998864
No 368
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=73.85 E-value=1.7 Score=43.33 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 359999999999999999998 99999999865
No 369
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=73.69 E-value=2.2 Score=44.55 Aligned_cols=35 Identities=20% Similarity=0.516 Sum_probs=30.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
..-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 3569999999999999999999 95 89999988754
No 370
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=73.68 E-value=1.9 Score=42.17 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=30.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 3569999999999999999999 95 8999998764
No 371
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=73.45 E-value=1.8 Score=39.91 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=29.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.-+.|||.|..|...|..|++ |.+|++.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 459999999999999999999 99999998865
No 372
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=73.35 E-value=2.2 Score=43.00 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=29.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
...+.|||.|..|+..|..+|+ |.+|+.+|..+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3569999999999999999999 99999998764
No 373
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=73.31 E-value=3 Score=25.34 Aligned_cols=16 Identities=13% Similarity=0.100 Sum_probs=10.0
Q ss_pred CCcchhhHHHHHHHHH
Q 009241 1 MDLRCLRLSFVATLAT 16 (539)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (539)
|+||.|..+.++++++
T Consensus 3 lsRR~FLK~~aaa~Aa 18 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAA 18 (35)
T ss_dssp CCSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHH
Confidence 5799986654444443
No 374
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=73.09 E-value=2.1 Score=41.23 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=27.7
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ |. .|.++++.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999999 98 999999864
No 375
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.99 E-value=2 Score=40.77 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||.|..|..+|..|.. |.+|++.++.+
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999 99999998864
No 376
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=72.91 E-value=2.1 Score=41.97 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
-|+|+|.|..|..+|..|.+ |.+|++.++.
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 49999999999999999999 9999998864
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=72.90 E-value=2.3 Score=40.41 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 38999999999999999999 99999998865
No 378
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=72.90 E-value=2.2 Score=40.26 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=28.7
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|.|||.|..|...|..|++ |.+|.+.++.+.
T Consensus 4 i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 4 FGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 8899999999999999999 999999988753
No 379
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.87 E-value=2.2 Score=36.78 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=36.8
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHHHhcCC
Q 009241 220 EYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 293 (539)
Q Consensus 220 ~~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lLl~SGi 293 (539)
..+++.|++++++ +|+++..+++ . +.+...+| .+. ++.||+|+|.. |.++...|+
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EEE-----ECEEEECCCCC--CCccccCCC
Confidence 3556679999999 9999987655 2 23333355 233 68999999975 445444444
No 380
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=72.66 E-value=2.9 Score=40.04 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|.|||.|..|...|..|++ |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999999 99999998865
No 381
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=72.52 E-value=2.5 Score=40.04 Aligned_cols=31 Identities=26% Similarity=0.368 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999 99999998764
No 382
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=72.30 E-value=1.5 Score=41.10 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998864
No 383
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=72.14 E-value=2.3 Score=40.11 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
--++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 359999999999999999999 97 799998764
No 384
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=72.13 E-value=2.1 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~~ 81 (539)
-.|+|||+|.+|+-+|..|++ +.+|.++++.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 369999999999999999999 9999999998753
No 385
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=72.04 E-value=2.1 Score=43.90 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|++.++.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 38999999999999999999 99999999865
No 386
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=72.00 E-value=2.9 Score=40.29 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 49999999999999999999 87 999999764
No 387
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.92 E-value=2.9 Score=40.22 Aligned_cols=31 Identities=23% Similarity=0.456 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 59999999999999999999 99999998865
No 388
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.82 E-value=2.1 Score=40.82 Aligned_cols=31 Identities=19% Similarity=0.117 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 59999999999999999999 99999998865
No 389
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.81 E-value=2.2 Score=40.61 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||.|..|..+|..|.. |.+|++.++.+
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998864
No 390
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=71.70 E-value=2.7 Score=39.55 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-.++|+|+|.+|.++|..|++ |. +|.|+-|..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999 97 899998764
No 391
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=71.53 E-value=2.3 Score=40.84 Aligned_cols=31 Identities=13% Similarity=0.291 Sum_probs=27.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG 78 (539)
--++|+|+|.+|.++|..|++ |. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 359999999999999999999 97 89999886
No 392
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=71.09 E-value=2.2 Score=42.74 Aligned_cols=31 Identities=32% Similarity=0.256 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 249 TVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 59999999999999999988 99999999865
No 393
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=71.08 E-value=2.4 Score=40.51 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=27.6
Q ss_pred EEEECCCcchHHHHHhhhc-C--CeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-N--ASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G--~~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ | ..|.++++..
T Consensus 4 I~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 4 IGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 8999999999999999999 8 6899999864
No 394
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=70.93 E-value=2.9 Score=40.87 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=28.3
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|+|||||.-|..+|+.+.+ |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 8999999999999999888 999999987664
No 395
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=70.92 E-value=2.3 Score=48.13 Aligned_cols=31 Identities=32% Similarity=0.405 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
.|+|||+|..|+=+|..|++ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999 96 899999986
No 396
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=70.89 E-value=2.6 Score=39.59 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.++|||+|..|..+|..|.+ |.+|.+..|.+
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 99999998864
No 397
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=70.70 E-value=4.1 Score=41.77 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=32.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc---CCeEEEEcCCCCC
Q 009241 45 VSYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 81 (539)
Q Consensus 45 ~~~~DviVVGsG~aG~~aA~~La~---G~~VlvlEkG~~~ 81 (539)
+..+||||||+|++|+.+|..|.+ |.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 457999999999999999988876 6899999998753
No 398
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=70.69 E-value=2.2 Score=43.66 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999998 99999999865
No 399
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=70.60 E-value=3.2 Score=39.19 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=27.8
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 8899999999999999999 99999998864
No 400
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=70.60 E-value=5 Score=40.44 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=34.2
Q ss_pred cEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 227 LTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 227 v~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
++|+++++|++|..+++ + |.+...+|+. + .++.||+|+......++|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g~~--~-----~ad~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C---YSLELDNGVT--L-----DADSVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S---EEEEESSSCE--E-----EESEEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcCC-----e---EEEEECCCCE--E-----ECCEEEECCCHHHHHHHc
Confidence 79999999999998776 3 3344446753 3 269999999976655554
No 401
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=70.49 E-value=2.4 Score=39.91 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-++|||+|.+|..+|..|++ |. +|.|+.|..
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999 97 899998865
No 402
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=70.48 E-value=2.6 Score=39.43 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=27.6
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998764
No 403
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=70.46 E-value=2.1 Score=42.22 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-C-------CeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N-------ASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G-------~~VlvlEkG~~ 80 (539)
-|.|||+|..|...|..|++ | .+|.++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 39999999999999999999 9 89999988653
No 404
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.44 E-value=2.7 Score=42.47 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=30.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
...+.|||.|.-|+..|..|++ |.+|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3568999999999999999999 999999999764
No 405
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=70.23 E-value=2.7 Score=40.38 Aligned_cols=30 Identities=33% Similarity=0.431 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG 78 (539)
-|.|||+|..|..+|..|+. |. .|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 59999999999999999999 98 99999986
No 406
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=70.20 E-value=3.2 Score=39.24 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ |.+|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 49999999999999999999 99999998864
No 407
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=70.19 E-value=2.5 Score=39.94 Aligned_cols=31 Identities=32% Similarity=0.354 Sum_probs=27.8
Q ss_pred cEEEEC-CCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVG-sG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+| +|..|..+|..|++ |.+|.++.|..
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 599999 89999999999999 99999998753
No 408
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=70.17 E-value=2.7 Score=38.90 Aligned_cols=30 Identities=23% Similarity=0.514 Sum_probs=27.7
Q ss_pred EEEECCCcchHHHHHhhhc-C-CeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G-~~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ | .+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 7899999999999999999 9 9999998864
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=70.08 E-value=3 Score=39.02 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=28.2
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|+|.|+|..|..++.+|.+ |.+|.++.|.+
T Consensus 8 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 8 LLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred EEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 9999999999999999999 99999998865
No 410
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=69.91 E-value=2 Score=41.89 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=29.1
Q ss_pred cEEEECCCcchHHHHHhhhc-C-------CeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N-------ASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G-------~~VlvlEkG~~ 80 (539)
-|.|||+|..|...|..|++ | .+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 49999999999999999999 9 89999998653
No 411
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=69.85 E-value=1.6 Score=39.47 Aligned_cols=31 Identities=29% Similarity=0.623 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEE-EcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLL-LERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~Vlv-lEkG~ 79 (539)
-+.|||+|..|...|..|++ |.+|.+ .++.+
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 49999999999999999999 999988 77764
No 412
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=69.55 E-value=2.7 Score=43.16 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 228 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL 228 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc
Confidence 369999999999999998876 789999999875
No 413
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=69.51 E-value=2.8 Score=40.84 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
--|+|+|.|..|..+|..|.+ |.+|++.+..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 359999999999999999999 9999998754
No 414
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=69.44 E-value=2.6 Score=43.21 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~----G~~VlvlEkG~~ 80 (539)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 369999999999999999876 789999999875
No 415
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=69.13 E-value=2.7 Score=39.01 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=27.2
Q ss_pred cEEEECC-C-cchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGG-G-TAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGs-G-~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
=++|.|+ | ..|..+|.+|++ |.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3899998 7 599999999999 99999998764
No 416
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=69.13 E-value=2.8 Score=39.29 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=28.6
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|+|.|+|..|..++.+|.+ |.+|.++.|...
T Consensus 6 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 6 ILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 9999999999999999999 999999988753
No 417
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=68.89 E-value=3.2 Score=39.74 Aligned_cols=30 Identities=30% Similarity=0.490 Sum_probs=27.2
Q ss_pred EEEECCCcchHHHHHhhhc---CCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ---NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~---G~~VlvlEkG~ 79 (539)
|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999988 47899999865
No 418
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=68.88 E-value=2.7 Score=38.89 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-++|||+|.+|.+++..|.+ |. +|.|..|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999999 97 899998864
No 419
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=68.88 E-value=3.1 Score=36.98 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.4
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs-G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|+|+|+ |..|..++.+|.+ |.+|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 899995 9999999999999 99999998865
No 420
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=68.87 E-value=2 Score=39.10 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
.|.|||.|..|.+.|..|++ |.+|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 49999999999999999999 999998877
No 421
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=68.85 E-value=2.9 Score=40.17 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-C-CeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G-~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999999875
No 422
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=68.45 E-value=2.9 Score=40.74 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=30.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
...|+|||.|..|+.+|..|+. |. ++.|++-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 3569999999999999999999 96 8999987654
No 423
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=68.43 E-value=3.2 Score=38.92 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
--++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 459999999999999999999 95 999998754
No 424
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=68.26 E-value=2.6 Score=42.88 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG 78 (539)
-|+|||+|..|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 49999999999999999999 9999999874
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=68.25 E-value=3.1 Score=39.96 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
-|.|||.|..|...|..|++ |. +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 59999999999999999999 98 999998865
No 426
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=68.21 E-value=3.1 Score=39.01 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=27.4
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
|.|||.|..|...|..|++ |. +|++.++.+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 8899999999999999999 87 899998764
No 427
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=68.09 E-value=3.4 Score=38.94 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
--++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 359999999999999999999 95 999998864
No 428
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=68.02 E-value=3.5 Score=39.46 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 38999999999999999999 86 899999754
No 429
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=67.80 E-value=3 Score=43.68 Aligned_cols=33 Identities=33% Similarity=0.579 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-.++|||.|-.|..+|..|.+ |.+|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 469999999999999999999 999999999875
No 430
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=67.71 E-value=3 Score=42.00 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=29.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 80 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~ 80 (539)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 4569999999999999999999 85 8999987654
No 431
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=67.71 E-value=3.1 Score=41.82 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQNASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~G~~VlvlEkG~ 79 (539)
.|.|||.|..|+..|..|++|.+|+++++.+
T Consensus 38 kIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 5999999999999999999999999999875
No 432
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=67.56 E-value=3.1 Score=39.82 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=27.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG 78 (539)
--++|+|+|.+|.++|..|++ |. +|.|+-|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 359999999999999999999 97 89999886
No 433
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=67.39 E-value=3.9 Score=41.10 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
..-|||.|.-|+..|..|++ |.+|+++++.+
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999999999999 99999999875
No 434
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=67.33 E-value=3.3 Score=37.51 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=28.2
Q ss_pred cEEEECC-CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGs-G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|.|+ |..|..+|.+|++ |.+|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3899997 9999999999999 99999998865
No 435
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=67.24 E-value=3.4 Score=39.58 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG 78 (539)
-.|.|||.|..|...|..|++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 359999999999999999999 99 99999985
No 436
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=67.04 E-value=3.9 Score=39.40 Aligned_cols=32 Identities=22% Similarity=0.028 Sum_probs=27.8
Q ss_pred cEEEECCCcchHH-HHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCP-LAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~-aA~~La~-G~~VlvlEkG~~ 80 (539)
-|.|||.|.+|++ +|..|.+ |.+|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3899999999996 7777888 999999998754
No 437
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=66.91 E-value=3.1 Score=41.46 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=25.6
Q ss_pred cEEEECCCcchHHHHHhhhc--CCeEEEEc
Q 009241 49 DYIVIGGGTAGCPLAASLSQ--NASVLLLE 76 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~--G~~VlvlE 76 (539)
.|.|||+|..|...|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999976 78999998
No 438
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=66.87 E-value=3.8 Score=36.54 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=28.1
Q ss_pred EEEEC-CCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIG-GGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVG-sG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|+|.| +|..|..++.+|.+ |.+|.++.|.+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 78999 79999999999999 999999998753
No 439
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=66.87 E-value=3.4 Score=36.20 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=28.1
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 50 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 50 viVVGs-G~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
|+|+|+ |..|..++.+|.+ |.+|.++.|.+.
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 899998 9999999999999 999999988653
No 440
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=66.83 E-value=3.3 Score=44.81 Aligned_cols=31 Identities=35% Similarity=0.548 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|++.++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999999875
No 441
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=66.77 E-value=3.6 Score=40.96 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=27.6
Q ss_pred EEEECCCcchHHHHHhhhcCCeEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQNASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~G~~VlvlEkG~ 79 (539)
+.|||.|..|+..|..|++|.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999988999998864
No 442
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=66.62 E-value=4.1 Score=38.14 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-.++|||+|.+|..+|..|++ |. +|.|+-|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999999 96 899998763
No 443
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=66.47 E-value=3.6 Score=36.76 Aligned_cols=30 Identities=30% Similarity=0.481 Sum_probs=27.6
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs-G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
|+|.|+ |..|..++.+|.+ |.+|.++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899997 9999999999999 99999998864
No 444
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=66.31 E-value=3.3 Score=44.78 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
--|-|||+|..|..+|..++. |.+|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 359999999999999999999 99999999865
No 445
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=66.28 E-value=3.5 Score=38.81 Aligned_cols=31 Identities=13% Similarity=0.341 Sum_probs=28.4
Q ss_pred cEEEECC-CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGs-G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+ |..|...|..|++ |.+|.+.++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4999999 9999999999999 99999998864
No 446
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=66.28 E-value=3.5 Score=41.16 Aligned_cols=31 Identities=32% Similarity=0.498 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|+|||+|..|..+|..|.. |. +|+++.+.+
T Consensus 169 ~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 169 TVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999 97 999998864
No 447
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=66.06 E-value=3.7 Score=39.60 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=27.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG 78 (539)
-|.|||+|..|.++|..|+. |. .|.++|..
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 49999999999999999999 86 89999874
No 448
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=66.00 E-value=5.2 Score=38.29 Aligned_cols=32 Identities=34% Similarity=0.393 Sum_probs=27.9
Q ss_pred CccEEEECCC-cchHHHHHhhhc-CCeEEEEcCC
Q 009241 47 YYDYIVIGGG-TAGCPLAASLSQ-NASVLLLERG 78 (539)
Q Consensus 47 ~~DviVVGsG-~aG~~aA~~La~-G~~VlvlEkG 78 (539)
.-.++|||+| ..|..+|..|.. |.+|.++.|.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3579999999 569999999999 9999998775
No 449
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=65.80 E-value=4.1 Score=40.75 Aligned_cols=33 Identities=15% Similarity=0.357 Sum_probs=28.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC---eEEEEcCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA---SVLLLERGDS 80 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~---~VlvlEkG~~ 80 (539)
.-|+|.|+|.+|+.+|.-|.+ |. ++.++++-+.
T Consensus 220 ~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 220 CRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred cEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 459999999999999999988 87 7999998753
No 450
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=65.79 E-value=3.8 Score=40.09 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999 99999998865
No 451
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=65.71 E-value=3.5 Score=39.65 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-C----CeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N----ASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G----~~VlvlEkG~ 79 (539)
.|.|||+|..|...|..|++ | .+|.+.++.+
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 49999999999999999999 8 7899998864
No 452
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=65.56 E-value=3.7 Score=41.03 Aligned_cols=31 Identities=32% Similarity=0.292 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 213 tVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 213 TACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 59999999999999999999 99999999864
No 453
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=65.37 E-value=5.1 Score=37.35 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=26.8
Q ss_pred EEEECC---CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG---GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs---G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 5889999999999 99999998864
No 454
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=65.25 E-value=4.8 Score=41.06 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc--CC-eEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ--NA-SVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~--G~-~VlvlEkG~~ 80 (539)
.|.|||.|..|+..|..|++ |. +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 49999999999999999987 78 9999998764
No 455
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=64.95 E-value=4.3 Score=39.32 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||.|..|..+|..|+. |.+|++.++.+
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 49999999999999999999 99999998865
No 456
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=64.86 E-value=4.1 Score=38.64 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=27.4
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
|.|||+|..|.+.|..|+. |. .|.++++.+
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 86 899999864
No 457
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=64.79 E-value=3.8 Score=38.02 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.+.|||+|..|..+|..|.+ |.+|.+..+..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999 98999998864
No 458
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=64.77 E-value=5 Score=38.24 Aligned_cols=32 Identities=31% Similarity=0.452 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999 99999998865
No 459
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=64.71 E-value=4.2 Score=38.75 Aligned_cols=31 Identities=26% Similarity=0.521 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. .|.|+|...
T Consensus 16 kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 16 KITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 49999999999999999999 87 899999865
No 460
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=64.33 E-value=4.5 Score=38.91 Aligned_cols=31 Identities=26% Similarity=0.407 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|.++|..|+. |. .|.+++..+
T Consensus 9 kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 49999999999999999999 87 999999865
No 461
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=64.26 E-value=4.5 Score=41.36 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 47 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 47 ~~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
+-+|.|||.|..|...|..|++ |.+|.+.+|.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3579999999999999999999 99999998864
No 462
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=64.17 E-value=3.5 Score=40.03 Aligned_cols=31 Identities=29% Similarity=0.355 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|..|.+.|..|.+ |.+|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38999999999999999999 99999998865
No 463
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=64.00 E-value=3.4 Score=36.28 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=26.6
Q ss_pred cEEEEC-CCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVG-sG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|+| +|..|..++..+.. |.+|+++++.+
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 389999 68999999998888 99999998754
No 464
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=63.93 E-value=4.8 Score=40.84 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=34.9
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe--------------CCCCeEEEEeccCCCCeEEEcCCCcccH
Q 009241 225 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD--------------ATDAEHIAYLRNGPKNEIIVSAGALGSP 285 (539)
Q Consensus 225 ~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~--------------~~g~~~~~~~~~~~a~~VVlAaG~~~sp 285 (539)
.|+++++++.+++|..+ + ++.+|++.+ .+|+...+ .++.||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i-----~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREEL-----PAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEE-----ECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEE-----EcCEEEEccccccCC
Confidence 68999999999998754 2 566666542 12433334 489999999987666
No 465
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=63.77 E-value=5.1 Score=40.55 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|+|+|+|..|..+|..|++ |.+|.++.|..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 38999999999999999999 99999998753
No 466
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=63.77 E-value=3.9 Score=37.80 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhc-C----CeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-N----ASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G----~~VlvlEkG~ 79 (539)
-|.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 49999999999999999999 8 6899998865
No 467
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=63.53 E-value=4.5 Score=36.84 Aligned_cols=30 Identities=23% Similarity=0.474 Sum_probs=26.7
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs-G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
++|.|+ |..|..+|.+|++ |.+|+++.|.+
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8889999999999 99999998865
No 468
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=63.48 E-value=4.4 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
-|.|||+|..|..+|..|+. |. .|.++|...
T Consensus 23 kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 23 KITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp EEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 49999999999999999999 86 899998743
No 469
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=63.43 E-value=3.8 Score=38.02 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCe-EEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~-VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+ |.+.++.+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 49999999999999999999 988 88998764
No 470
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=63.35 E-value=3.8 Score=43.24 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEcCCCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 81 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~~~ 81 (539)
.-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve 53 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTID 53 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEC
Confidence 469999999999999999999 95 89999987643
No 471
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=63.28 E-value=3.8 Score=37.92 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=25.7
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEcC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NASVLLLER 77 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~~VlvlEk 77 (539)
|.|||.|..|...|..|++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999998765
No 472
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=67.03 E-value=1.5 Score=39.04 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||.|..|...|..|.+ |.+|.+.++.+
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 38999999999999999999 99999988764
No 473
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=62.86 E-value=4.5 Score=41.14 Aligned_cols=31 Identities=42% Similarity=0.653 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQNASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~G~~VlvlEkG~ 79 (539)
.|+|+|+|-.|..+|..|.++.+|.|+|+..
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred EEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 6999999999999999996688999999975
No 474
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=62.82 E-value=6 Score=39.46 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=31.8
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCC
Q 009241 221 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGA 281 (539)
Q Consensus 221 ~~~~~gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~ 281 (539)
.+++.| +|+++++|++|..+++ .+ .+...+|+. + .++.||+|+|.
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~-----~v---~v~~~~g~~--~-----~ad~vi~a~~~ 257 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGD-----VV---NVTVKDGHA--F-----QAHSVIVATPM 257 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSS-----SE---EEEETTSCC--E-----EEEEEEECSCG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCC-----eE---EEEECCCCE--E-----EeCEEEEecCc
Confidence 345567 9999999999987765 33 333346653 2 26899999984
No 475
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=62.79 E-value=3.4 Score=41.50 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=26.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CC---eEEEEc
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA---SVLLLE 76 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~---~VlvlE 76 (539)
-++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 59999999999999999999 97 799998
No 476
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=62.75 E-value=4.6 Score=38.27 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQNASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~G~~VlvlEkG~ 79 (539)
-|.|||.|..|...|..|+.|.+|++.++.+
T Consensus 14 ~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 4899999999999998877778999999875
No 477
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=62.72 E-value=5.1 Score=41.74 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=37.2
Q ss_pred hhhhcCCC-CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCCcc
Q 009241 218 LLEYANPS-GLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALG 283 (539)
Q Consensus 218 ~l~~~~~~-gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~~~ 283 (539)
+...+.+. |++++++ +|++|..++++ ++++|... +|. ++ .++.||+|+|...
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i-----~ad~vI~A~G~~S 252 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VF-----DADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----ECSEEEECCGGGC
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----ECCEEEECCCCch
Confidence 33455556 9999999 99999886553 67777653 564 23 3899999999743
No 478
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=62.61 E-value=4.6 Score=41.33 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999 99999998864
No 479
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=62.45 E-value=5.7 Score=38.38 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-+.|||.|..|..+|..|+. |.+|++.++.+
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 49999999999999999999 99999998865
No 480
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=62.42 E-value=4.7 Score=39.08 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|..|.+.|..|++ |.+|++.++.+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 39999999999999999999 99999988754
No 481
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.39 E-value=3.8 Score=39.58 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
.++|+|.|-.|..+|..|.+ |. |+++|+.+.
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEESCGGG
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEeCChh
Confidence 59999999999999999999 99 999998763
No 482
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=62.30 E-value=5.2 Score=38.44 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~-~VlvlEkG~ 79 (539)
-|.|||+|..|.++|..|+. |. .|.+++..+
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 49999999999999999998 77 999999865
No 483
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=62.13 E-value=4.8 Score=38.74 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEcCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 78 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG 78 (539)
-|.|||+|..|.++|..|+. |. .+.++|..
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 49999999999999999999 76 89999884
No 484
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.08 E-value=3.4 Score=42.83 Aligned_cols=31 Identities=35% Similarity=0.486 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-++|+|+|.+|..+|..|++ |.+|.++.|..
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~ 397 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTY 397 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998753
No 485
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=62.07 E-value=4.4 Score=41.41 Aligned_cols=31 Identities=29% Similarity=0.404 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
.|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998864
No 486
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=62.06 E-value=4.9 Score=37.30 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=26.4
Q ss_pred EEEECC---CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG---GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs---G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
++|.|+ |..|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 889994 7889999999999 99999998754
No 487
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=61.89 E-value=5.8 Score=38.33 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=29.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 80 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~~ 80 (539)
-+.|||.|..|..+|.+|.. |.+|++.++.+.
T Consensus 166 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 166 RVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 49999999999999999999 999999988653
No 488
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=61.57 E-value=4.8 Score=35.95 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=26.9
Q ss_pred EEEEC-CCcchHHHHHhhh-c-CCeEEEEcCCC
Q 009241 50 YIVIG-GGTAGCPLAASLS-Q-NASVLLLERGD 79 (539)
Q Consensus 50 viVVG-sG~aG~~aA~~La-~-G~~VlvlEkG~ 79 (539)
|+|.| +|..|..+|.+|+ + |.+|.++.|.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 7 99999998864
No 489
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=61.45 E-value=4.8 Score=37.89 Aligned_cols=28 Identities=25% Similarity=0.405 Sum_probs=26.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEc
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLE 76 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlE 76 (539)
-|.|||.|..|...|..|++ |.+|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 38999999999999999999 99999987
No 490
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=61.44 E-value=5.5 Score=38.12 Aligned_cols=30 Identities=27% Similarity=0.579 Sum_probs=27.3
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEcCCC
Q 009241 50 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 79 (539)
Q Consensus 50 viVVGsG~aG~~aA~~La~-G~--~VlvlEkG~ 79 (539)
|.|||+|..|..+|..|+. |. .|.++|..+
T Consensus 3 v~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 7899999999999999999 76 899999865
No 491
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=61.18 E-value=9.6 Score=38.62 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=30.4
Q ss_pred CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCCeEEEcCCC
Q 009241 226 GLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGA 281 (539)
Q Consensus 226 gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~~~g~~~~~~~~~~~a~~VVlAaG~ 281 (539)
+.+|+++++|++|..+++ +++ | ...+|+. + .++.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~-----~v~-v--~~~~g~~--~-----~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG-----GVT-V--KTEDNSV--Y-----SADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSS-----CEE-E--EETTSCE--E-----EESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCC-----cEE-E--EECCCCE--E-----EcCEEEEecCH
Confidence 678999999999998776 443 3 3446653 2 27999999984
No 492
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=61.08 E-value=5.6 Score=36.70 Aligned_cols=30 Identities=30% Similarity=0.421 Sum_probs=26.5
Q ss_pred EEEECC---CcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGG---GTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGs---G~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
++|.|+ |..|..+|.+|++ |.+|+++.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899997 5889999999999 99999998754
No 493
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.08 E-value=4.7 Score=36.48 Aligned_cols=32 Identities=19% Similarity=0.420 Sum_probs=28.1
Q ss_pred cEEEEC-CCcchHHHHHhhhc-C-CeEEEEcCCCC
Q 009241 49 DYIVIG-GGTAGCPLAASLSQ-N-ASVLLLERGDS 80 (539)
Q Consensus 49 DviVVG-sG~aG~~aA~~La~-G-~~VlvlEkG~~ 80 (539)
-|+|.| +|..|..+|.+|++ | .+|+++.|.+.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 389999 69999999999999 9 89999988753
No 494
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=60.80 E-value=5.7 Score=37.54 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=26.2
Q ss_pred EEEECCC---cchHHHHHhhhc-CCeEEEEcCCC
Q 009241 50 YIVIGGG---TAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 50 viVVGsG---~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
++|.|++ ..|..+|.+|++ |.+|+++.+..
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 8888985 788999999999 99999998763
No 495
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=60.72 E-value=7.2 Score=39.50 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=33.6
Q ss_pred CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCCeEEEcCCCcccHHHH
Q 009241 226 GLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 288 (539)
Q Consensus 226 gv~i~~~t~V~~l~~~~~~~~~~~v~gV~~~~-~~g~~~~~~~~~~~a~~VVlAaG~~~sp~lL 288 (539)
|.+|+++++|++|..+++ + +.|.+.+ .+|+ .+ .++.||+|++.....+|+
T Consensus 249 g~~i~~~~~V~~i~~~~~-----~-~~v~~~~~~~g~--~~-----~ad~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 249 GDAAHVGARVEGLAREDG-----G-WRLIIEEHGRRA--EL-----SVAQVVLAAPAHATAKLL 299 (478)
T ss_dssp GGGEESSEEEEEEECC-------C-CEEEEEETTEEE--EE-----ECSEEEECSCHHHHHHHH
T ss_pred hhhEEcCCEEEEEEecCC-----e-EEEEEeecCCCc--eE-----EcCEEEECCCHHHHHHHh
Confidence 578999999999988765 3 3455432 2343 23 389999999976666554
No 496
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=60.68 E-value=5.8 Score=38.29 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|..|..+|..|+. |.+|++.++..
T Consensus 157 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 157 TVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 49999999999999999999 99999998754
No 497
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=60.62 E-value=5.6 Score=40.59 Aligned_cols=31 Identities=32% Similarity=0.271 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||.|..|..+|.+|.. |.+|++.++.+
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~ 310 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLGATVWVTEIDP 310 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 59999999999999999999 99999999865
No 498
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=60.61 E-value=6.4 Score=37.96 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=27.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEcCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 78 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~--~VlvlEkG 78 (539)
--|.|||+|..|.++|+.|+. |. .|.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 459999999999999999998 76 79999874
No 499
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=60.48 E-value=3.8 Score=44.26 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 49 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 49 DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
-|.|||+|..|...|..|++ |.+|++.++.+
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999999875
No 500
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=60.45 E-value=5.9 Score=40.66 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEcCCC
Q 009241 48 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 79 (539)
Q Consensus 48 ~DviVVGsG~aG~~aA~~La~-G~~VlvlEkG~ 79 (539)
..|.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999 99999998865
Done!