BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009242
(539 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 248/558 (44%), Gaps = 77/558 (13%)
Query: 30 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNG 88
R Y W V +P V+ INGQFPGP + D++++ + NKL + ++ W+G
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 89 IKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXX 147
I QR W DG + C I P + Y F T D G++FY M R+AG YG +
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNF-TVDNPGTFFYHGHLGMQRSAGLYGSL-IV 121
Query: 148 XXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPF-----PDGVLINGQGH- 201
DG+ LL+ DW+ H+ + + S P P +L+NG+G
Sbjct: 122 DPPQGKKEPFHYDGEINLLLSDWW---HQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 202 -------------------------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKL 236
F+ KTY RI++ + NF I H + +
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 237 VEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKDYYIVASTRF----TKNVLTATA 290
VE +G++ +Q Y S +D++ G+S SVL+T +Q P ++Y++ TR T LT
Sbjct: 239 VEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLN 297
Query: 291 ILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRT 350
L + S P S P P P ++ +++ F + +TA P P F+ R
Sbjct: 298 YLPNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRITAAMGSPKPPVKFN-------RR 346
Query: 351 IVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVN----------SIQSV 400
I L N+ +ING +++A+N +S TP A +N+ F N I +
Sbjct: 347 IFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTP 406
Query: 401 PSGGASSVATSVMQVNLHEYIEVVFQN------NEKTMQSWHLDGYDFWVVGYGSGQWAA 454
P+ + + V Q + E ++V+ QN N WHL G+DFWV+GYG G+++A
Sbjct: 407 PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA 466
Query: 455 EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 514
E+ + NL + R+T ++P WT I DN G+W I ++G
Sbjct: 467 EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFA--EG 524
Query: 515 VHSLANEYDIPSNILVCG 532
V + IP+ L CG
Sbjct: 525 VEKVGR---IPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 197/485 (40%), Gaps = 70/485 (14%)
Query: 33 TWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WN 87
T T+T+ +SP G + IL+NG GP + NDN LNV+N LD P +L W+
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 88 GIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINX 146
G+ QR +W DG G N CPI P + YKF G+++Y G G +
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 147 XXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGH---- 201
D + T++ + DW+ ++ PD LING+G
Sbjct: 127 YDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDATLINGKGRYVGG 179
Query: 202 -----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHV 256
+ N +QGK Y R+ ++ ++ F I GH + ++EV+G T + D L +
Sbjct: 180 PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 239
Query: 257 GQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGP 309
GQ S ++ NQP +Y+I A +N L T AIL Y +G P
Sbjct: 240 GQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADP 292
Query: 310 TYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN 369
T + + Q + + A P G G + L S R+ +N
Sbjct: 293 TTSANPNPAQLNEADLHALIDPAAP---GIPTPGAADVNLRFQLGFSGG------RFTIN 343
Query: 370 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE 429
G +Y + P L + G S N + +P+G SV ++ ++ +E+V
Sbjct: 344 GTAYESPSVPTLLQI---MSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGV 391
Query: 430 -KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLD 486
+HL G+ F VV + TYN + + R V T+ V+ D
Sbjct: 392 LGGPHPFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-D 443
Query: 487 NQGMW 491
N G W
Sbjct: 444 NPGPW 448
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 197/485 (40%), Gaps = 70/485 (14%)
Query: 33 TWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WN 87
T T+T+ +SP G + IL+NG GP + NDN LNV+N LD P +L W+
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 88 GIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINX 146
G+ QR +W DG G N CPI P + YKF G+++Y G G +
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 147 XXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGH---- 201
D + T++ + DW+ ++ PD LING+G
Sbjct: 127 YDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDATLINGKGRYVGG 179
Query: 202 -----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHV 256
+ N +QGK Y R+ ++ ++ F I GH + ++EV+G T + D L +
Sbjct: 180 PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 239
Query: 257 GQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGP 309
GQ S ++ NQP +Y+I A +N L T AIL Y +G P
Sbjct: 240 GQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADP 292
Query: 310 TYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN 369
T + + Q + + A P G G + L S R+ +N
Sbjct: 293 TTSANPNPAQLNEADLHALIDPAAP---GIPTPGAADVNLRFQLGFSGG------RFTIN 343
Query: 370 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE 429
G +Y + P L + G S N + +P+G SV ++ ++ +E+V
Sbjct: 344 GTAYESPSVPTLLQI---MSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGV 391
Query: 430 -KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLD 486
+HL G+ F VV + TYN + + R V T+ V+ D
Sbjct: 392 LGGPHPFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-D 443
Query: 487 NQGMW 491
N G W
Sbjct: 444 NPGPW 448
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 34/298 (11%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+++G +SP G ++ IL+N FP P + D LNVI+ + +L W+G
Sbjct: 9 TISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI + Y FQ DQ G+++Y G G I
Sbjct: 69 FQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHT--TFN 205
D D T++ + DW+ K+ G +P D LING G + T
Sbjct: 129 PNDPHASLYDVDDDSTVITLADWYHLAAKV-------GAPVPTADATLINGLGRSAATLA 181
Query: 206 GD-------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQ 258
D +GK Y FR+ ++ ++ F I GH++ ++E + + + DSL + Q
Sbjct: 182 ADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
Query: 259 SVSVLVTLNQPPKDYYIVA-STRFTKNVL--TATAILHY--------TNSHSPASGPL 305
S ++ +Q +Y+I A T+N T +AIL Y T S +P++ PL
Sbjct: 242 RYSFVLNADQDVDNYWIRALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTPSTNPL 299
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 34/298 (11%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+++G +SP G ++ IL+N FP P + D LNVI+ + +L W+G
Sbjct: 9 TISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI + Y FQ DQ G+++Y G G I
Sbjct: 69 FQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHT--TFN 205
D D T++ + DW+ K+ G +P D LING G + T
Sbjct: 129 PNDPHASLYDVDDDSTVITLADWYHLAAKV-------GAPVPTADATLINGLGRSAATLA 181
Query: 206 GD-------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQ 258
D +GK Y FR+ ++ ++ F I GH++ ++E + + + DSL + Q
Sbjct: 182 ADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
Query: 259 SVSVLVTLNQPPKDYYIVA-STRFTKNVL--TATAILHY--------TNSHSPASGPL 305
S ++ +Q +Y+I A T+N T +AIL Y T S +P++ PL
Sbjct: 242 RYSFVLNADQDVDNYWIRALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTPSTNPL 299
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 27/280 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T+ +SP G ++ +++NG PGP + D LNVI+ L +L W+G
Sbjct: 9 TITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q+ +W DG N CPI ++ Y FQ DQ G+++Y G G
Sbjct: 69 FQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHT--TF 204
D D T++ + DW+ K+ G + P D LING+G + T
Sbjct: 129 PNDPAADLYDVDNDDTVITLVDWYHVAAKL-------GPAFPLGADATLINGKGRSPSTT 181
Query: 205 NGD-------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
D GK Y FR+ ++ ++ F I GH M ++E + +T + DS+ +
Sbjct: 182 TADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRFTKNVLTA---TAILHY 294
Q S ++ NQ +Y+I A+ F T +AIL Y
Sbjct: 242 QRYSFVLEANQAVDNYWIRANPNFGNVGFTGGINSAILRY 281
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 121/280 (43%), Gaps = 27/280 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T+ +SP G +E +++NG P P + D LNVI++L +L W+G
Sbjct: 9 TLTNAQVSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q+ +W DG N CPI ++ Y FQ DQ G+++Y G G
Sbjct: 69 FQQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTT--- 203
D D T++ + DW+ K+ G PF D LING G TT
Sbjct: 129 PNDPHASLYDIDNDDTVITLADWYHVAAKL-------GPRFPFGSDSTLINGLGRTTGIA 181
Query: 204 ------FNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
QGK Y FR+ ++ + F I HTM ++E + +T DS+ +
Sbjct: 182 PSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRFTKNVLTA---TAILHY 294
Q S ++ +QP +Y+I A+ F +AIL Y
Sbjct: 242 QRYSFVLDASQPVDNYWIRANPAFGNTGFAGGINSAILRY 281
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 191/494 (38%), Gaps = 81/494 (16%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+++G +SP G ++ IL+N FP P + D LNVI+ + +L W+G
Sbjct: 9 TISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI + Y FQ DQ G+++Y G G I
Sbjct: 69 FQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHT--TFN 205
D D T++ + DW+ K+ G +P D LING G + T N
Sbjct: 129 PQDPHKSLYDVDDDSTVITLADWYHLAAKV-------GSPVPTADATLINGLGRSIDTLN 181
Query: 206 GD-------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQ 258
D +GK Y FR+ ++ + F I GH++ ++E + + DS+ + Q
Sbjct: 182 ADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQ 241
Query: 259 SVSVLVTLNQPPKDYYIVA-STRFTKNVLTA--TAILHY--------TNSHSPASGPLPT 307
S ++ +Q +Y+I A T+N +AIL Y T S +P++ PL
Sbjct: 242 RYSFVLNADQDVGNYWIRALPNSGTRNFDGGVNSAILRYDGAAPVEPTTSQTPSTNPL-- 299
Query: 308 GPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA 367
++ A T TA P P G + LA + ++
Sbjct: 300 ---------VESALT-TLEGTAAPGSPAPGG------------VDLALNMAFGFAGGKFT 337
Query: 368 VNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN 427
+NG S+ P+ L + G S + +PSG SV + + IE+
Sbjct: 338 INGASFTPPTVPVLLQ---ILSGAQSAQDL--LPSG-------SVYSLPANADIEISLPA 385
Query: 428 NEKT---MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILV 483
+HL G+ F VV + TYN + + R P I
Sbjct: 386 TAAAPGFPHPFHLHGHTFAVV-------RSAGSSTYNYENPVYRDVVSTGSPGDNVTIRF 438
Query: 484 SLDNQGMWNMRSAI 497
DN G W + I
Sbjct: 439 RTDNPGPWFLHCHI 452
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 130/317 (41%), Gaps = 48/317 (15%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T SP G ++ +++NG PGP + D LNVI+ L +L W+G
Sbjct: 9 TITDAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q+ +W DG N CPI P ++ Y FQ +Q G+++Y G G
Sbjct: 69 FQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGH----- 201
D D T++ + DW+ T K+ G P D LING+G
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWYHTAAKL-------GPRFPAGADATLINGKGRAPSDT 181
Query: 202 ----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+ +GK FR+ ++ +F F I GH + ++EV+ S++ DS+ +
Sbjct: 182 SAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRF------------------------TKNVLTATAILH 293
Q S ++ NQ +Y+I A+ F T N T+ L+
Sbjct: 242 QRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYDGAPAVEPTTNQTTSVKPLN 301
Query: 294 YTNSHSPASGPLPTGPT 310
N H S P+P P+
Sbjct: 302 EVNLHPLVSTPVPGSPS 318
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 24/264 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T +SP G ++ +++NG PGP + D LNVI+ L +L W+G
Sbjct: 9 TITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI P ++ Y FQ DQ G+++Y G G
Sbjct: 69 FQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTTFNG 206
D D T++ + DW+ T K+ G P D LING+G +
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWYHTAAKL-------GPRFPGGADATLINGKGRAPSDS 181
Query: 207 ---------DQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+GK Y FR+ ++ + + F I GH + ++EV+ ++ DS+ +
Sbjct: 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRF 281
Q S ++ NQ +Y+I A+ F
Sbjct: 242 QRYSFVLDANQAVDNYWIRANPNF 265
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 24/264 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T +SP G ++ +++NG PGP + D LNVI+ L +L W+G
Sbjct: 9 TITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI P ++ Y FQ DQ G+++Y G G
Sbjct: 69 FQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTTFNG 206
D D T++ + DW+ T K+ G P D LING+G +
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWYHTAAKL-------GPRFPGGADATLINGKGRAPSDS 181
Query: 207 ---------DQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+GK Y FR+ ++ + + F I GH + ++EV+ ++ DS+ +
Sbjct: 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRF 281
Q S ++ NQ +Y+I A+ F
Sbjct: 242 QRYSFVLDANQAVDNYWIRANPNF 265
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+++ ++P G + ++ NG FPGP + DN +NVI+ L +L W+G+
Sbjct: 9 TISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGL 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q +W DG N CPI +++ Y F DQ G+++Y G G +
Sbjct: 69 FQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLP-FPDGVLINGQGH----- 201
D D T++ + DW+ T K+ G + P D VLING G
Sbjct: 129 PSDPYASMYDVDDDTTVITLSDWYHTAAKL-------GPAFPPNADSVLINGLGRFAGGN 181
Query: 202 ----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+Q K Y FR+ ++ +F F I GH M ++EV+G + DS+ +
Sbjct: 182 ASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFAS 241
Query: 258 QSVSVLVTLNQPPKDYYIVA 277
Q S ++ Q +Y+I A
Sbjct: 242 QRYSFVLNATQSVDNYWIRA 261
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 33 TWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WN 87
+ V + +SP G ++ I++NG FP P + D LNV++ L +L W+
Sbjct: 7 SLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWH 66
Query: 88 GIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINX 146
G Q +W DG N CPI ++ Y F DQ G+++Y G G
Sbjct: 67 GFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 XXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTT- 203
D + T++ + DW+ T ++ G P D LING G +
Sbjct: 127 YDPKDPHASRYDVDNESTVITLTDWYHTAARL-------GPRFPLGADATLINGLGRSAS 179
Query: 204 --------FNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVH 255
N GK Y FR+ ++ ++ F I GH + ++EV+G ++ + DS+ +
Sbjct: 180 TPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIF 239
Query: 256 VGQSVSVLVTLNQPPKDYYIVASTRF 281
Q S ++ NQ +Y+I A+ F
Sbjct: 240 AAQRYSFVLNANQTVGNYWIRANPNF 265
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 128/316 (40%), Gaps = 48/316 (15%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
T+T+ SP G ++ +++NG PGP + D LNVI+ L +L W+G
Sbjct: 9 TITNAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q+ +W DG N CPI P ++ Y FQ +Q G+++Y G G
Sbjct: 69 FQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGD-FTLLIGDWFKTNHKILRQTLDSGKSLP-FPDGVLINGQGHTTFNG 206
D D T+ + DW+ T K+ G + P D LING+G +
Sbjct: 129 PNDPHASRYDVDNDDTTITLADWYHTAAKL-------GPAFPNGADSTLINGKGRAPSDS 181
Query: 207 D---------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+GK FR+ ++ +F F I GH ++E + ++ DS+ +
Sbjct: 182 SAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRF------------------------TKNVLTATAILH 293
Q S + NQ +Y+I A+ F T N T+T L+
Sbjct: 242 QRYSFTLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYDGAPAVEPTTNQSTSTQPLN 301
Query: 294 YTNSHSPASGPLPTGP 309
TN H S P+P P
Sbjct: 302 ETNLHPLVSTPVPGSP 317
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 27/283 (9%)
Query: 35 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGI 89
TVT+ + P G + I++N FP P + DN LN++N++ +L W+G
Sbjct: 9 TVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGF 68
Query: 90 KQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXX 148
Q+ +W DG N CPI +++ Y FQ Q G+++Y G G
Sbjct: 69 FQKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYD 128
Query: 149 XXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTT--- 203
D + T++ + DW+ K+ G P D LING G +T
Sbjct: 129 PNDPHANLYDVDDESTVITLADWYHVAAKL-------GPRFPKGADSTLINGLGRSTSTP 181
Query: 204 ------FNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
+ +GK Y FR+ ++ ++ F I H + ++E +G T DS+ +
Sbjct: 182 TADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAA 241
Query: 258 QSVSVLVTLNQPPKDYYIVASTRFTKNVLTA---TAILHYTNS 297
Q S ++ NQ +Y+I A+ F +AIL Y ++
Sbjct: 242 QRYSFVLNANQDVDNYWIRANPNFGTTGFADGVNSAILRYDDA 284
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 201/525 (38%), Gaps = 99/525 (18%)
Query: 30 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-LTWNG 88
R Y +V + T++P G + + NG PGP + DN+I++V N L+ + W+G
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 89 IKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXX 147
I+Q + DGV G T CPI P TYKFQ Q G+ +Y + G +G +
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL--- 183
Query: 148 XXXXXXXXXXXXDGDF-TLLIGDWFKTNHKILRQTLDSGK--SLPFPDGVLINGQGHTTF 204
D D + + DW H+ + + D+ + + P + L+NG TF
Sbjct: 184 --IINGPATADYDEDVGVIFLQDW---AHESVFEIWDTARLGAPPALENTLMNGTN--TF 236
Query: 205 NGD-------------------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI 245
+ +G Y R+ NVG+ + F F I HT+ ++ + +
Sbjct: 237 DCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296
Query: 246 QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIV---ASTRFTKN-VLTATAILHYTNSHSPA 301
D+L + +GQ V+V N +Y+I +T T N AT IL Y +S
Sbjct: 297 PYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS--I 354
Query: 302 SGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLIN 361
+ P G T P+G T +A+ P
Sbjct: 355 ANPTSVGTT-------------------------PRG--------TCEDEPVASLVP--- 378
Query: 362 GKLRYAVNGISYVNSDTPLKLADYFN-------------IPGIFSVNSIQSVPSGGASSV 408
L V G S V+ +YF P + + +++ + V
Sbjct: 379 -HLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVV 437
Query: 409 ATSVMQVNLHEYIEVVFQNNEKTMQSW---HLDGYDFWVVGYGSGQW-AAEKRRTYNLAD 464
A + Q N +E V + W HL G+DF++V + + + E +NL +
Sbjct: 438 A--LEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVN 495
Query: 465 TLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAI-WE-RQYLGQQF 507
R A + + I LDN G W + I W + L QF
Sbjct: 496 PPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQF 540
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 192/495 (38%), Gaps = 100/495 (20%)
Query: 50 VILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-LTWNGIKQRKNSWQDGV-LGTNCPI 107
VI NGQFP P + V D + + + N ++ + ++G+ Q + DGV T CPI
Sbjct: 24 VITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPI 83
Query: 108 PPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGY-GGINXXXXXXXXXXXXXXDGDFTLL 166
P S Y F +G+Y+Y T G Y G+ D + +L
Sbjct: 84 APGSTMLYNFTVDYNVGTYWYHSHT-----DGQYEDGMKGLFIIKDDSFPYDYDEELSLS 138
Query: 167 IGDWFKTNHKILRQTLDSGKSL-------PFPDGVLINGQGHTTFNGDQGKTYMFRISNV 219
+ +W+ H ++ S S+ P P +++N + T+ TY+ RI NV
Sbjct: 139 LSEWY---HDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNLTWEVQPDTTYLLRIVNV 195
Query: 220 GLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLV-TLNQPPKDYYIVAS 278
G S F I+ H M +VE++G T +N+ D L + V Q +VLV T N K++ I+
Sbjct: 196 GGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQ- 254
Query: 279 TRFTKNV---------LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 329
+F + L AT+ + Y + LPT + L
Sbjct: 255 -KFDDTMLDVIPSDLQLNATSYMVYN-----KTAALPT---------QNYVDSIDNFLDD 299
Query: 330 NAARPNPQGSFHYGKIN--TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN 387
+P + + YG+ + T +V+ N L NG N I+Y P
Sbjct: 300 FYLQPYEKEAI-YGEPDHVITVDVVMDN---LKNGVNYAFFNNITYTAPKVP-------- 347
Query: 388 IPGIFSVNSIQSVPSGGASSVATSVMQVNLH-------EYIEVVFQNNEKTMQSWHLDGY 440
++ +V S G + + + N H E +E+V N + +HL G+
Sbjct: 348 --------TLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGH 399
Query: 441 DFWVVGYGSGQWAAEKRRTYNLA------------------DTLTRHTAQVYPQSWTVIL 482
F + ++ RTY+ A + R T V PQS VI
Sbjct: 400 AFQTI---------QRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIR 450
Query: 483 VSLDNQGMWNMRSAI 497
DN G+W I
Sbjct: 451 FKADNPGVWFFHCHI 465
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 196/513 (38%), Gaps = 97/513 (18%)
Query: 30 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-LTWNG 88
R Y +V + T++P G + + NG PGP + DN+I++V N L+ + W+G
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 89 IKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXX 147
I+Q + DGV G T CPI P TYKFQ Q G+ +Y + G +G +
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL--- 183
Query: 148 XXXXXXXXXXXXDGDF-TLLIGDWFKTNHKILRQTLDSGK--SLPFPDGVLINGQGHTTF 204
D D + + DW H+ + + D+ + + P + L+NG TF
Sbjct: 184 --IINGPATADYDEDVGVIFLQDW---AHESVFEIWDTARLGAPPALENTLMNGTN--TF 236
Query: 205 NGD-------------------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI 245
+ +G Y R+ NVG+ + F F I HT+ ++ + +
Sbjct: 237 DCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296
Query: 246 QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIV---ASTRFTKN-VLTATAILHYTNSHSPA 301
D+L + +GQ V+V N +Y+I +T T N AT IL Y +S
Sbjct: 297 PYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS--I 354
Query: 302 SGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLIN 361
+ P G T P+G T +A+ P
Sbjct: 355 ANPTSVGTT-------------------------PRG--------TCEDEPVASLVP--- 378
Query: 362 GKLRYAVNGISYVNSDTPLKLADYFN-------------IPGIFSVNSIQSVPSGGASSV 408
L V G S V+ +YF P + + +++ + V
Sbjct: 379 -HLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVV 437
Query: 409 ATSVMQVNLHEYIEVVFQNNEKTMQSW---HLDGYDFWVVGYGSGQW-AAEKRRTYNLAD 464
A + Q N +E V + W HL G+DF++V + + + E +NL +
Sbjct: 438 A--LEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVN 495
Query: 465 TLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAI 497
R A + + I LDN G W + I
Sbjct: 496 PPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHI 528
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 183/486 (37%), Gaps = 65/486 (13%)
Query: 36 VTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIK 90
+ + + P G + + G FPGP + DN + N+L + +L W+G
Sbjct: 11 IVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEF 70
Query: 91 QRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXX 149
Q+ +W DG T CPI ++++Y F G+Y+Y G G
Sbjct: 71 QKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDP 130
Query: 150 XXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNG-- 206
D D T++ + DW+ +L + + +G ++ D LI+G G T N
Sbjct: 131 NDPDANLYDVDDDTTIITLADWYH----VLAKEMGAGGAI-TADSTLIDGLGRTHVNVAA 185
Query: 207 --------DQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQ 258
+ GK Y R+ ++ +++F I GH M ++E +G + + D + + Q
Sbjct: 186 VPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245
Query: 259 SVSVLVTLNQPPKDYYIVASTRFTKNVLTA---TAILHYTNSHSPASGPLPTGPTYEIHW 315
S ++ NQP +Y+I A+ +AIL Y + + + P+ T
Sbjct: 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATT--ADPVTVASTVHTKC 303
Query: 316 SMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVN 375
++ T L+ N NP +N + N + +NG+S+
Sbjct: 304 LIE---TDLHPLSRNGVPGNPHQGGADCNLNLSLGFACGN----------FVINGVSFTP 350
Query: 376 SDTP--LKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TM 432
P L++ N + +PSG SV+ + + IE+
Sbjct: 351 PTVPVLLQICSGAN-------TAADLLPSG-------SVISLPSNSTIEIALPAGAAGGP 396
Query: 433 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTV-ILVSLDNQGMW 491
+HL G+DF V + T N D + R + V I DN G W
Sbjct: 397 HPFHLHGHDFAVS-------ESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPW 449
Query: 492 NMRSAI 497
+ I
Sbjct: 450 FLHCHI 455
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 181/462 (39%), Gaps = 73/462 (15%)
Query: 36 VTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIK 90
VT+ ++ G ++ +++NG PGP + D LNVIN L +L W+G
Sbjct: 10 VTNAAVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFF 69
Query: 91 QRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXX 149
Q+ +W DG N CPI S++ Y F T Q G+++Y G G
Sbjct: 70 QKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVVYDP 129
Query: 150 XXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGH------ 201
D T++ + DW+ T +G + P D LINGQG
Sbjct: 130 NDPSANLYDVDNLNTVITLTDWYHT-------AAQNGPAKPGGADATLINGQGRGPSSPS 182
Query: 202 ---TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQ 258
+ GK Y FR+ + ++ F I GH M +++V+ + + + ++ Q
Sbjct: 183 ADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQ 242
Query: 259 SVSVLVTLNQPPKDYYIVASTR-----FTKNVLTATAILHYTNSHSPASGPLPTGPTYEI 313
S ++ NQ +Y+I A+ FT + +AIL Y SG T PT
Sbjct: 243 RYSFILNANQAVNNYWIRANPNQGNVGFTNGI--NSAILRY-------SGAAATQPTTSQ 293
Query: 314 HWSMKQA-RTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGIS 372
S++ +T LTA A +P G +N + N A NG + V+G S
Sbjct: 294 TSSVQPLDQTNLHPLTATAVPGSPVA----GGVN-----LAINQAFNFNGTNHF-VDGAS 343
Query: 373 YVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATS-VMQVNLHEYIEVVFQNNEKT 431
+V P+ ++ I S A +A+ V + IE+ F
Sbjct: 344 FVPPTVPV-------------LSQIVSGAQSAADLLASGLVYSLPSDANIEISFPATSAA 390
Query: 432 M---QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT 470
+HL G+ F VV + TYN D + R T
Sbjct: 391 AGGPHPFHLHGHAFAVV-------RSAGSTTYNYNDPIFRDT 425
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 22/248 (8%)
Query: 67 NDNIILNVINKLDQPFL-----LTWNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTK 120
+D +NVI++L + + W+G Q + DG N CPI PN ++ Y F
Sbjct: 62 DDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVP 121
Query: 121 DQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILR 179
Q G+Y+Y G G D T++ I DW+ + +L
Sbjct: 122 GQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLF 181
Query: 180 QTLDSGKSLPFPDGVLINGQGHTTFNGD----------QGKTYMFRISNVGLSTSFNFRI 229
+ P D LING G + N GK Y FRI + ++ F I
Sbjct: 182 PNPNKAPPAP--DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSI 239
Query: 230 QGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA- 288
GH M ++EV+G DSL + GQ SV+V NQ +Y+I A+ +N T
Sbjct: 240 DGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGG 299
Query: 289 --TAILHY 294
+AI Y
Sbjct: 300 INSAIFRY 307
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 190/486 (39%), Gaps = 68/486 (13%)
Query: 41 LSPLGVPQE-VILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQD 98
+ P GV +E V+LING GP + D + + VIN L + W+GI Q+ + D
Sbjct: 47 MGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHD 106
Query: 99 GVLG-TNCPIPPNS-NYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXX 156
G G T CPIPP TY+++ + Q G+ +Y G G I
Sbjct: 107 GANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-- 163
Query: 157 XXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGD-------- 207
D D + I D++ L + PF D VLING G+
Sbjct: 164 ---DIDLGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTL 219
Query: 208 -QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL 266
GK + RI N F + HTM ++ + DSL + VGQ V++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDA 279
Query: 267 NQPPKDYYI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQA 320
++ P +Y+ A+ + N A AI HY A G LPT E +
Sbjct: 280 SRAPDNYWFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQ 331
Query: 321 RTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPL 380
++ R P SF NT + PL + VNG S +N D
Sbjct: 332 CLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGK 386
Query: 381 KLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----W 435
+ DY I + N+ + V+ +++QV+ + ++ + +N+ + S
Sbjct: 387 PIIDY-----ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433
Query: 436 HLDGYDFWVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSL 485
HL G+DF V+G AA ++R ++ A L R P+ W ++
Sbjct: 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT 493
Query: 486 DNQGMW 491
DN G W
Sbjct: 494 DNPGAW 499
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 190/486 (39%), Gaps = 68/486 (13%)
Query: 41 LSPLGVPQE-VILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQD 98
+ P GV +E V+LING GP + D + + VIN L + W+GI Q+ + D
Sbjct: 47 MGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHD 106
Query: 99 GVLG-TNCPIPPNS-NYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXX 156
G G T CPIPP TY+++ + Q G+ +Y G G I
Sbjct: 107 GANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-- 163
Query: 157 XXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGD-------- 207
D D + I D++ L + PF D VLING G+
Sbjct: 164 ---DIDLGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTL 219
Query: 208 -QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL 266
GK + RI N F + HTM ++ + DSL + VGQ V++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDA 279
Query: 267 NQPPKDYYI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQA 320
++ P +Y+ A+ + N A AI HY A G LPT E +
Sbjct: 280 SRAPDNYWFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQ 331
Query: 321 RTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPL 380
++ R P SF NT + PL + VNG S +N D
Sbjct: 332 CLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGK 386
Query: 381 KLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----W 435
+ DY I + N+ + V+ +++QV+ + ++ + +N+ + S
Sbjct: 387 PIIDY-----ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433
Query: 436 HLDGYDFWVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSL 485
HL G+DF V+G AA ++R ++ A L R P+ W ++
Sbjct: 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT 493
Query: 486 DNQGMW 491
DN G W
Sbjct: 494 DNPGAW 499
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 190/486 (39%), Gaps = 68/486 (13%)
Query: 41 LSPLGVPQE-VILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQD 98
+ P GV +E V+LING GP + D + + VIN L + W+GI Q+ + D
Sbjct: 47 MGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHD 106
Query: 99 GVLG-TNCPIPPNS-NYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXX 156
G G T CPIPP TY+++ + Q G+ +Y G G I
Sbjct: 107 GANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-- 163
Query: 157 XXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGD-------- 207
D D + I D++ L + PF D VLING G+
Sbjct: 164 ---DIDLGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTL 219
Query: 208 -QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL 266
GK + RI N F + HTM ++ + DSL + VGQ V++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDA 279
Query: 267 NQPPKDYYI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQA 320
++ P +Y+ A+ + N A AI HY A G LPT E +
Sbjct: 280 SRAPDNYWFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQ 331
Query: 321 RTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPL 380
++ R P SF NT + PL + VNG S +N D
Sbjct: 332 CLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGK 386
Query: 381 KLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----W 435
+ DY I + N+ + V+ +++QV+ + ++ + +N+ + S
Sbjct: 387 PIIDY-----ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433
Query: 436 HLDGYDFWVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSL 485
HL G+DF V+G AA ++R ++ A L R P+ W ++
Sbjct: 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT 493
Query: 486 DNQGMW 491
DN G W
Sbjct: 494 DNPGAW 499
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 181/485 (37%), Gaps = 66/485 (13%)
Query: 41 LSPLGVPQEVI-LINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQD 98
+ P GV + V+ L+N + GP + DNI + VIN L + W+G++Q N + D
Sbjct: 88 IGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFND 147
Query: 99 GVLG-TNCPIPPN-SNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXX 156
G G T CPIPP TYKF+ Q G+ +Y A G G +
Sbjct: 148 GANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSH---FSAQYGNGVVGTIQIDGPASLP 203
Query: 157 XXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNG---------D 207
D L+ ++++ +++ T +G P D VL NG G
Sbjct: 204 YDIDLGVFPLMDYYYRSADELVHFTQSNGA--PPSDNVLFNGTARHPETGAGQWYNVTLT 261
Query: 208 QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLN 267
GK + RI N F + GH M ++ + SL + VGQ V + N
Sbjct: 262 PGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDAN 321
Query: 268 QPPKDYYIVAS----TRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTF 323
P +Y+ + + N AI Y +PA+ P G H +
Sbjct: 322 SPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQG--APATLPTDQGLPVPNHMCLDNL--- 376
Query: 324 RWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLA 383
NLT R P +F NT + PL + VNG S +N D +
Sbjct: 377 --NLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPL----FVWKVNG-SAINVDWGKPIL 429
Query: 384 DYFNIPGIFSVNSIQSVPSGGAS-SVATSVMQVNLHEYIEVVFQNNEKT------MQSWH 436
DY V SG S V+ +++QV+ + N+ T H
Sbjct: 430 DY--------------VMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHPMH 475
Query: 437 LDGYDFWVVGYGSGQW-AAEKRRTYNLADTL--------TRHTAQVYPQ-SWTVILVSLD 486
L G+DF V+G + +A R ++ A L R + P W ++ D
Sbjct: 476 LHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTD 535
Query: 487 NQGMW 491
N G W
Sbjct: 536 NPGAW 540
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 20/242 (8%)
Query: 38 SGTLSPLGVP-QEVILIN--GQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKN 94
S T +PL + Q L+ G FPGP L V D + L + N+L +P L W+G+
Sbjct: 22 SATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL----- 76
Query: 95 SWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRA-----AGGYGGINXXXX 149
V IPP ++TY+F ++ F++ L R AG G +
Sbjct: 77 PISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESS 136
Query: 150 XXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLD--SGKSLPFPDGVLINGQGHTTFNGD 207
+ +L + +D +GK D VL+NG T
Sbjct: 137 LDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKE---GDLVLVNGALRPTLVA- 192
Query: 208 QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDS-LDVHVGQSVSVLVTL 266
Q T R+ N + + +Q H + L+ +G + + S L + G+ VLV L
Sbjct: 193 QKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRL 252
Query: 267 NQ 268
+
Sbjct: 253 RK 254
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 18/225 (8%)
Query: 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNY 113
NG P P+++V D + + V NKL + + W+G+ + QDG + PI
Sbjct: 76 NGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPD--QDG--SPHDPILAGEER 131
Query: 114 TYKFQT-KDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDW-F 171
Y+F+ +D G+Y+Y P + + G+ + L+I D
Sbjct: 132 IYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRL 191
Query: 172 KTNHKILRQTLD---SGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFR 228
N +I L+ +G+ F VLINGQ RI N + N R
Sbjct: 192 DENAQIPNNNLNDWLNGREGEF---VLINGQFKPKIK--LATNERIRIYNATAARYLNLR 246
Query: 229 IQGHTMKLVEVEGSHTIQNIY-DSLDVHVGQSVSVLVTLNQPPKD 272
IQG LV +G + IY + L + V VL+ PKD
Sbjct: 247 IQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLI---DAPKD 288
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQ-DGV-LGTNCPIPPNS 111
NGQ P P + V+ D++ +NV N P + W+G+ QR +WQ DGV T I P
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQR-GTWQSDGVPHATQHAIEPGD 86
Query: 112 NYTYKFQTK 120
+TYKF+ +
Sbjct: 87 TFTYKFKAE 95
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 64/172 (37%), Gaps = 16/172 (9%)
Query: 109 PNSNYTYKFQTKDQIGSYFYFPSTL---MHRAAGGYGGINXXXXXXXXXXXXXXDGDFTL 165
P T+ F+ Q G Y Y + MH A G YG I D +F +
Sbjct: 115 PGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLI----LVEPKEGLPKVDKEFYI 169
Query: 166 LIGDWFKTNHKILR--QTLDSGKSLPF-PDGVLINGQ-----GHTTFNGDQGKTYMFRIS 217
+ GD++ K + Q D K++ P+ V+ NG G G+T +
Sbjct: 170 VQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVG 229
Query: 218 NVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP 269
N G + +F + G V VEG I S V G S V ++ P
Sbjct: 230 NGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP 281
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 37 TSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILN--------VINKLDQPFLLTWNG 88
TS + PL +E I G + V N IIL + NKL +P ++ W+G
Sbjct: 9 TSAPVPPL--IKEATYIEATASGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHG 66
Query: 89 IKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFP 130
+W + + I P +Y Y F ++ G+Y Y P
Sbjct: 67 FDV---NWHNDA-HPSFAITPGESYNYSFDVVNRAGTYLYHP 104
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNC-PIPPNSN 112
NG+ PGP L D + ++ N P + ++G+ + + DG G I P +
Sbjct: 60 NGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPGQS 116
Query: 113 YTYKFQTKDQIGSYFY--FPSTLM-HRAAGGYGGI 144
+TY+F G++ Y S L H A G YGG
Sbjct: 117 FTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGF 150
>pdb|1TCM|A Chain A, Cyclodextrin Glycosyltransferase W616a Mutant From
Bacillus Circulans Strain 251
pdb|1TCM|B Chain B, Cyclodextrin Glycosyltransferase W616a Mutant From
Bacillus Circulans Strain 251
Length = 686
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 ADPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1KCK|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant N193g
Length = 686
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1PJ9|A Chain A, Bacillus Circulans Strain 251 Loop Mutant 183-195
Length = 686
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGY|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGV|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glycosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
pdb|2DIJ|A Chain A, Complex Of A Y195f Mutant Cgtase From B. Circulans Strain
251 Complexed With A Maltononaose Inhibitor At Ph 9.8
Obtained After Soaking The Crystal With Acarbose And
Maltohexaose
Length = 686
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CXK|A Chain A, Complex Between A Maltononaose Substrate And Bacillus
Circulans Strain 251 Cgtase E257qD229N
pdb|1D3C|A Chain A, Michaelis Complex Of Bacillus Circulans Strain 251
Cyclodextrin Glycosyltransferase With Gamma-Cyclodextrin
pdb|1CXF|A Chain A, Complex Of A (D229nE257Q) DOUBLE MUTANT CGTASE FROM
Bacillus Circulans Strain 251 With Maltotetraose At 120
K And Ph 9.1 Obtained After Soaking The Crystal With
Alpha- Cyclodextrin
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGW|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glycosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGX|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1OT2|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant D135n
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1KCL|A Chain A, Bacillus Ciruclans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant G179l
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1EO5|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase In Complex With Maltoheptaose
pdb|1EO7|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase In Complex With Maltohexaose
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CDG|A Chain A, Nucleotide Sequence And X-Ray Structure Of Cyclodextrin
Glycosyltransferase From Bacillus Circulans Strain 251
In A Maltose-Dependent Crystal Form
pdb|1CXE|A Chain A, Complex Of Cgtase With Maltotetraose At Room Temperature
And Ph 9.1 Based On Diffraction Data Of A Crystal Soaked
With Alpha-Cyclodextrin
pdb|1CXH|A Chain A, Complex Of Cgtase With Maltotetraose At Room Temperature
And Ph 9.6 Based On Diffraction Data Of A Crystal Soaked
With Maltoheptaose
pdb|1CXI|A Chain A, Wild-Type Cgtase From Bacillus Circulans Strain 251 At 120
K And Ph 7.55
pdb|2CXG|A Chain A, Cyclodextrin Glycosyltransferase Complexed To The
Inhibitor Acarbose
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1DTU|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase: A Mutant Y89dS146P COMPLEXED TO AN
Hexasaccharide Inhibitor
Length = 686
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1OT1|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant D135a
Length = 686
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CXL|A Chain A, Complex Between A Covalent Intermediate And Bacillus
Circulans Strain 251 Cgtase E257q
Length = 686
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1PEZ|A Chain A, Bacillus Circulans Strain 251 Mutant A230v
Length = 686
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 284
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 285 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 WDPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTATWEGGSN 667
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 57 FPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYK 116
PGP +++ D + + N +D P L +G+ +S DG + + P TY
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISS--DGTKQSRSDVEPGGTRTYT 96
Query: 117 FQT 119
++T
Sbjct: 97 WRT 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,876,304
Number of Sequences: 62578
Number of extensions: 731519
Number of successful extensions: 1689
Number of sequences better than 100.0: 60
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1549
Number of HSP's gapped (non-prelim): 85
length of query: 539
length of database: 14,973,337
effective HSP length: 104
effective length of query: 435
effective length of database: 8,465,225
effective search space: 3682372875
effective search space used: 3682372875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)