Query 009242
Match_columns 539
No_of_seqs 225 out of 1723
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 22:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 5.6E-99 2E-103 816.6 57.4 490 28-535 2-542 (552)
2 1v10_A Laccase; multicopper bl 100.0 1.8E-95 6E-100 782.7 49.0 476 23-538 17-515 (521)
3 1zpu_A Iron transport multicop 100.0 1.3E-94 4.3E-99 777.0 52.9 473 28-533 1-502 (534)
4 3sqr_A Laccase; multicopper ox 100.0 8.2E-95 2.8E-99 777.7 51.4 466 27-534 65-564 (580)
5 3t6v_A Laccase; beta barrel, o 100.0 7.1E-94 2.4E-98 762.2 50.1 465 30-535 5-492 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 2.1E-93 7.3E-98 758.4 51.5 465 30-537 4-494 (499)
7 1hfu_A Laccase 1; oxidoreducta 100.0 2.2E-92 7.7E-97 756.2 48.3 461 31-537 6-493 (503)
8 2q9o_A Laccase-1; multicopper 100.0 4.7E-91 1.6E-95 753.8 51.2 476 25-535 29-544 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 2.6E-86 8.8E-91 698.7 42.1 403 25-512 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.1E-85 1E-89 691.3 34.8 403 28-515 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 9E-83 3.1E-87 683.6 42.5 417 28-515 35-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 3.4E-82 1.2E-86 668.0 43.3 409 24-513 45-481 (481)
13 2wsd_A Spore coat protein A; o 100.0 5.9E-82 2E-86 677.2 40.8 426 27-514 23-511 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 2.6E-80 8.7E-85 682.7 42.5 443 25-516 28-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 1.1E-80 3.7E-85 655.6 33.0 382 51-512 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 4.2E-80 1.4E-84 651.6 37.0 412 27-511 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.6E-78 1.2E-82 652.4 45.2 443 26-515 29-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 6.2E-54 2.1E-58 493.8 40.2 388 23-448 15-488 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 6.6E-54 2.2E-58 431.8 31.6 264 28-298 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 1.2E-55 4E-60 488.9 10.7 238 29-280 46-314 (742)
21 2zwn_A Two-domain type laccase 100.0 2.1E-52 7.1E-57 425.4 32.8 264 28-298 2-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 4.2E-50 1.4E-54 425.1 30.1 398 26-517 25-437 (447)
23 1kbv_A ANIA, major outer membr 100.0 9E-50 3.1E-54 404.0 30.1 264 24-299 33-310 (327)
24 3kw8_A Laccase, putative coppe 100.0 1.6E-49 5.4E-54 392.7 25.7 245 24-516 2-268 (276)
25 3gdc_A Multicopper oxidase; be 100.0 9.9E-49 3.4E-53 389.4 29.8 232 27-280 32-273 (288)
26 2zoo_A Probable nitrite reduct 100.0 4.7E-46 1.6E-50 393.3 30.0 265 23-299 22-300 (442)
27 1mzy_A Copper-containing nitri 100.0 9.6E-46 3.3E-50 376.2 25.9 267 23-299 26-321 (333)
28 3cg8_A Laccase; oxidoreductase 100.0 2.4E-45 8.2E-50 373.0 27.7 252 26-531 45-318 (343)
29 2j5w_A Ceruloplasmin, ferroxid 100.0 2.9E-46 9.8E-51 430.2 22.3 385 46-516 616-1061(1065)
30 2bw4_A Copper-containing nitri 100.0 3.9E-45 1.3E-49 373.0 24.7 267 23-299 32-327 (340)
31 1oe1_A Dissimilatory copper-co 100.0 6.8E-45 2.3E-49 370.6 26.1 265 25-299 28-321 (336)
32 3tas_A Small laccase, multi-co 100.0 6E-45 2.1E-49 366.2 22.2 238 23-296 7-271 (313)
33 3t9w_A Small laccase, multi-co 100.0 2.8E-44 9.4E-49 358.6 21.5 224 22-280 22-272 (299)
34 1sdd_B Coagulation factor V; c 100.0 5.6E-41 1.9E-45 369.9 25.9 247 26-280 3-312 (647)
35 2dv6_A Nitrite reductase; elec 100.0 7.4E-40 2.5E-44 346.6 32.2 255 26-298 160-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 1.2E-42 4.2E-47 348.5 8.8 208 50-280 51-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 5.8E-41 2E-45 371.9 13.0 246 26-280 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 4.5E-37 1.5E-41 340.3 5.8 213 56-280 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.4E-30 8.4E-35 256.9 17.2 227 191-513 54-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 4.1E-29 1.4E-33 251.2 16.9 246 192-515 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 8.3E-29 2.8E-33 251.6 18.2 242 191-514 23-278 (339)
42 3t9w_A Small laccase, multi-co 100.0 1.5E-27 5E-32 237.7 17.6 217 196-516 51-290 (299)
43 3tas_A Small laccase, multi-co 99.9 9.3E-27 3.2E-31 233.7 20.9 217 197-517 36-275 (313)
44 1sdd_A Coagulation factor V; c 99.9 2.6E-25 8.8E-30 222.6 2.5 233 193-514 51-301 (306)
45 1kbv_A ANIA, major outer membr 99.9 2.9E-22 1E-26 202.3 18.7 243 192-515 59-309 (327)
46 1sdd_B Coagulation factor V; c 99.9 1.6E-22 5.5E-27 222.8 18.0 244 198-513 65-327 (647)
47 2bw4_A Copper-containing nitri 99.9 9.4E-22 3.2E-26 200.1 21.0 257 191-516 59-327 (340)
48 1mzy_A Copper-containing nitri 99.9 1.3E-20 4.6E-25 190.9 22.3 258 191-516 52-321 (333)
49 2r7e_B Coagulation factor VIII 99.9 8.7E-23 3E-27 226.4 3.6 244 198-512 195-455 (770)
50 2zoo_A Probable nitrite reduct 99.8 1.1E-19 3.9E-24 191.4 19.0 246 192-516 49-300 (442)
51 1oe1_A Dissimilatory copper-co 99.8 8E-19 2.7E-23 178.2 22.5 256 191-516 53-321 (336)
52 2xu9_A Laccase; oxidoreductase 99.8 6E-17 2E-21 170.1 23.2 237 28-280 145-425 (439)
53 2uxt_A Protein SUFI, SUFI; oxi 99.8 3.9E-17 1.3E-21 171.8 21.3 232 29-280 152-426 (451)
54 1v10_A Laccase; multicopper bl 99.7 3.7E-16 1.3E-20 167.3 20.7 244 30-280 163-476 (521)
55 1hfu_A Laccase 1; oxidoreducta 99.7 5.6E-16 1.9E-20 165.3 21.2 247 30-280 142-455 (503)
56 3t6v_A Laccase; beta barrel, o 99.6 4.3E-15 1.5E-19 157.5 19.6 230 47-280 167-456 (495)
57 3zx1_A Oxidoreductase, putativ 99.6 1.4E-14 4.8E-19 152.6 22.8 238 30-280 181-466 (481)
58 3pxl_A Laccase; 4-copper prote 99.6 1.9E-14 6.4E-19 152.6 19.9 229 48-280 166-456 (499)
59 1zpu_A Iron transport multicop 99.6 1.5E-14 5.2E-19 155.0 19.1 246 29-280 132-466 (534)
60 3cvb_A Plastocyanin; cupredoxi 99.6 2.3E-16 8E-21 131.8 3.9 90 55-148 14-105 (105)
61 1aoz_A Ascorbate oxidase; oxid 99.6 3.2E-14 1.1E-18 153.5 21.5 202 61-280 205-510 (552)
62 2q9o_A Laccase-1; multicopper 99.6 5.7E-14 1.9E-18 151.5 20.7 230 48-280 195-506 (559)
63 3kw8_A Laccase, putative coppe 99.6 7.6E-15 2.6E-19 144.4 11.7 110 28-151 146-268 (276)
64 3od3_A Blue copper oxidase CUE 99.6 9.8E-14 3.3E-18 146.2 19.7 245 30-280 151-475 (488)
65 3aw5_A Multicopper oxidase; be 99.5 2.1E-13 7E-18 143.2 19.7 224 30-280 138-434 (448)
66 2g23_A PHS, phenoxazinone synt 99.5 1.3E-12 4.6E-17 141.1 23.6 226 49-280 255-576 (612)
67 1iby_A Nitrosocyanin; RED copp 99.5 2.1E-13 7.1E-18 115.2 10.3 105 30-148 2-112 (112)
68 3abg_A Bilirubin oxidase; clea 99.5 8.6E-13 3E-17 141.2 17.3 241 30-280 172-460 (534)
69 2wsd_A Spore coat protein A; o 99.5 2.9E-13 9.8E-18 144.7 13.5 221 48-280 230-495 (513)
70 2cal_A Rusticyanin; iron respi 99.4 6E-13 2.1E-17 118.5 11.0 98 45-147 47-154 (154)
71 3cg8_A Laccase; oxidoreductase 99.4 7.6E-13 2.6E-17 133.9 11.6 104 51-156 198-314 (343)
72 3sqr_A Laccase; multicopper ox 99.4 1.5E-11 5.1E-16 132.1 21.3 227 48-280 225-529 (580)
73 1fwx_A Nitrous oxide reductase 99.3 6.7E-12 2.3E-16 133.7 11.4 96 44-149 497-593 (595)
74 3gyr_A PHS, phenoxazinone synt 99.3 1.6E-10 5.4E-15 126.6 20.5 89 192-281 459-577 (612)
75 2ov0_A Amicyanin; beta-sandwic 99.2 3.2E-11 1.1E-15 100.3 10.5 78 54-147 27-105 (105)
76 3cvb_A Plastocyanin; cupredoxi 99.2 3E-11 1E-15 100.4 7.2 86 411-513 19-105 (105)
77 2aan_A Auracyanin A; cupredoxi 99.2 3E-11 1E-15 106.0 7.3 94 412-512 36-139 (139)
78 2gim_A Plastocyanin; beta shee 99.1 1.7E-10 5.8E-15 96.1 8.8 83 59-148 19-106 (106)
79 2aan_A Auracyanin A; cupredoxi 99.0 2E-09 6.9E-14 94.2 10.7 90 56-147 31-139 (139)
80 1qhq_A Protein (auracyanin); e 98.9 1.2E-08 4E-13 89.4 12.9 91 57-148 30-140 (140)
81 2gim_A Plastocyanin; beta shee 98.9 3.8E-09 1.3E-13 87.8 7.9 85 411-512 20-105 (106)
82 4hci_A Cupredoxin 1; structura 98.9 7.4E-09 2.5E-13 85.1 8.7 79 54-147 22-100 (100)
83 2plt_A Plastocyanin; electron 98.8 5.3E-09 1.8E-13 85.6 6.1 80 59-147 17-98 (98)
84 3c75_A Amicyanin; copper prote 98.8 2.8E-08 9.5E-13 85.9 9.3 78 54-147 54-132 (132)
85 1pcs_A Plastocyanin; electron 98.8 1.7E-08 5.8E-13 82.5 7.6 81 59-147 18-98 (98)
86 1qhq_A Protein (auracyanin); e 98.7 2.7E-08 9.4E-13 87.0 9.0 96 412-512 34-139 (140)
87 1bxv_A Plastocyanin; copper pr 98.7 3.3E-08 1.1E-12 79.5 8.1 74 59-147 18-91 (91)
88 1pcs_A Plastocyanin; electron 98.7 7E-08 2.4E-12 78.8 9.5 80 411-512 19-98 (98)
89 1b3i_A PETE protein, protein ( 98.7 4.9E-08 1.7E-12 79.6 8.3 76 60-147 19-97 (97)
90 2plt_A Plastocyanin; electron 98.7 8.4E-08 2.9E-12 78.3 8.9 81 411-512 18-98 (98)
91 1kdj_A Plastocyanin; electron 98.6 6.4E-08 2.2E-12 79.6 7.8 77 59-147 16-102 (102)
92 3erx_A Pseudoazurin; copper pr 98.6 9.4E-08 3.2E-12 81.2 8.3 75 60-149 21-95 (123)
93 1byp_A Protein (plastocyanin); 98.6 2E-07 6.8E-12 76.2 9.4 77 59-147 16-99 (99)
94 1bxv_A Plastocyanin; copper pr 98.6 1.6E-07 5.5E-12 75.4 8.7 73 411-512 19-91 (91)
95 1plc_A Plastocyanin; electron 98.6 2E-07 6.9E-12 76.2 9.3 77 59-147 16-99 (99)
96 3tu6_A Pseudoazurin (blue copp 98.6 8.6E-08 2.9E-12 81.8 6.8 76 59-149 22-97 (127)
97 3ef4_A Pseudoazurin, blue copp 98.5 3.8E-07 1.3E-11 77.3 9.4 75 60-149 22-96 (124)
98 1iby_A Nitrosocyanin; RED copp 98.5 4.1E-07 1.4E-11 76.2 9.3 74 412-513 39-112 (112)
99 1b3i_A PETE protein, protein ( 98.5 1.9E-07 6.4E-12 76.1 6.3 78 412-512 20-97 (97)
100 1byp_A Protein (plastocyanin); 98.4 6.8E-07 2.3E-11 73.0 8.1 83 411-512 17-99 (99)
101 4hci_A Cupredoxin 1; structura 98.4 1.1E-06 3.6E-11 72.0 9.0 72 412-512 29-100 (100)
102 1iuz_A Plastocyanin; electron 98.4 5.5E-07 1.9E-11 73.4 6.9 77 59-147 17-98 (98)
103 1cuo_A Protein (azurin ISO-2); 98.3 1.3E-06 4.4E-11 74.8 8.4 92 56-148 14-129 (129)
104 1paz_A Pseudoazurin precursor; 98.3 1.5E-06 5E-11 73.9 8.3 76 59-149 20-95 (123)
105 1id2_A Amicyanin; beta barrel, 98.3 4.6E-06 1.6E-10 69.0 10.5 77 55-147 29-106 (106)
106 1pmy_A Pseudoazurin; electron 98.3 1.6E-06 5.3E-11 73.7 7.4 76 59-149 20-95 (123)
107 1kdj_A Plastocyanin; electron 98.3 7E-07 2.4E-11 73.3 4.9 87 410-512 16-102 (102)
108 3ay2_A Lipid modified azurin p 98.2 2.7E-06 9.3E-11 75.8 7.2 92 56-148 54-167 (167)
109 2ccw_A Azurin II, AZN-2; elect 98.1 1.5E-05 5.2E-10 68.1 10.7 91 56-147 14-128 (129)
110 2ux6_A Pseudoazurin; type-1 co 98.1 8.8E-06 3E-10 69.0 8.9 74 59-149 20-93 (122)
111 3sbq_A Nitrous-oxide reductase 98.1 9.9E-06 3.4E-10 84.7 11.0 92 44-148 540-637 (638)
112 1plc_A Plastocyanin; electron 98.1 1.1E-05 3.8E-10 65.6 8.5 83 410-511 16-98 (99)
113 2iaa_C Azurin; quinoprotein, t 98.1 2.4E-05 8.1E-10 66.7 10.3 91 56-147 13-127 (128)
114 1nwp_A Azurin; electron transp 98.1 2.5E-05 8.4E-10 66.6 10.3 91 56-147 14-128 (128)
115 2ov0_A Amicyanin; beta-sandwic 98.0 1.4E-05 4.9E-10 65.8 7.8 71 412-511 34-104 (105)
116 2cal_A Rusticyanin; iron respi 97.9 4.4E-05 1.5E-09 67.5 9.9 83 411-511 61-153 (154)
117 1fwx_A Nitrous oxide reductase 97.9 3E-05 1E-09 82.7 10.5 76 411-515 513-594 (595)
118 3fsa_A Azurin; copper, cupredo 97.4 0.00085 2.9E-08 56.3 9.6 86 56-147 14-125 (125)
119 3ef4_A Pseudoazurin, blue copp 97.3 0.00064 2.2E-08 57.4 7.3 75 412-515 23-97 (124)
120 1id2_A Amicyanin; beta barrel, 97.3 0.00083 2.8E-08 55.2 7.9 71 412-511 35-105 (106)
121 1iuz_A Plastocyanin; electron 97.2 0.0011 3.7E-08 53.5 8.4 82 410-512 17-98 (98)
122 3tu6_A Pseudoazurin (blue copp 97.2 0.00042 1.4E-08 58.8 5.7 76 411-515 23-98 (127)
123 3erx_A Pseudoazurin; copper pr 97.2 0.00094 3.2E-08 56.4 7.3 75 412-515 22-96 (123)
124 3c75_A Amicyanin; copper prote 97.1 0.0012 3.9E-08 56.7 7.8 72 412-512 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.9 0.0054 1.9E-07 52.6 9.9 75 60-148 60-135 (135)
126 3s8f_B Cytochrome C oxidase su 96.6 0.012 4.2E-07 52.1 10.1 76 59-148 92-168 (168)
127 1paz_A Pseudoazurin precursor; 96.5 0.0049 1.7E-07 51.9 6.9 74 412-514 22-95 (123)
128 1pmy_A Pseudoazurin; electron 96.4 0.0081 2.8E-07 50.6 7.3 75 412-515 22-96 (123)
129 3sbq_A Nitrous-oxide reductase 96.4 0.013 4.4E-07 61.6 10.0 76 411-513 558-637 (638)
130 2cua_A Protein (CUA); CUA cent 96.0 0.029 9.8E-07 48.0 9.1 71 413-513 62-135 (135)
131 3ay2_A Lipid modified azurin p 95.9 0.014 4.8E-07 51.8 6.6 92 412-513 59-167 (167)
132 2ux6_A Pseudoazurin; type-1 co 95.6 0.025 8.4E-07 47.5 6.8 72 412-514 22-93 (122)
133 1cuo_A Protein (azurin ISO-2); 95.3 0.092 3.2E-06 44.4 9.2 93 411-513 18-129 (129)
134 2iaa_C Azurin; quinoprotein, t 95.0 0.063 2.1E-06 45.4 7.3 91 412-512 18-127 (128)
135 3s8f_B Cytochrome C oxidase su 94.9 0.13 4.5E-06 45.5 9.4 73 413-513 95-168 (168)
136 2ccw_A Azurin II, AZN-2; elect 94.3 0.12 4.2E-06 43.6 7.7 91 412-512 19-128 (129)
137 1nwp_A Azurin; electron transp 94.0 0.16 5.4E-06 42.9 7.6 92 412-511 19-127 (128)
138 3fsa_A Azurin; copper, cupredo 91.2 1 3.4E-05 37.6 8.6 94 410-511 17-124 (125)
139 3isy_A Bsupi, intracellular pr 85.3 7.2 0.00025 32.1 9.9 70 208-278 16-100 (120)
140 3hb3_B Cytochrome C oxidase su 77.7 5.2 0.00018 38.6 7.5 79 411-517 189-268 (298)
141 1cyx_A CYOA; electron transpor 77.7 5 0.00017 36.3 6.8 77 412-516 42-120 (205)
142 2gsm_B Cytochrome C oxidase su 67.7 12 0.00042 35.3 7.3 78 411-516 171-249 (262)
143 1cyx_A CYOA; electron transpor 64.8 16 0.00055 33.0 7.1 59 203-280 42-100 (205)
144 1v54_B Cytochrome C oxidase po 58.6 18 0.00061 33.4 6.4 79 410-516 139-218 (227)
145 2gsm_B Cytochrome C oxidase su 56.8 35 0.0012 32.1 8.3 76 60-149 171-247 (262)
146 3hb3_B Cytochrome C oxidase su 55.1 39 0.0013 32.4 8.4 77 59-149 188-265 (298)
147 1yew_A Particulate methane mon 54.3 29 0.00098 34.0 7.2 17 104-120 319-335 (382)
148 2r39_A FIXG-related protein; s 52.8 43 0.0015 27.1 7.3 46 211-266 34-81 (118)
149 2f1e_A Protein APAG; APAG prot 46.1 17 0.00057 30.2 3.6 46 71-116 34-85 (127)
150 2xzz_A Protein-glutamine gamma 45.0 26 0.00089 27.8 4.5 52 69-126 23-79 (102)
151 1fft_B Ubiquinol oxidase; elec 44.8 17 0.00057 35.3 4.0 76 413-516 153-230 (315)
152 1xvs_A Protein APAG; MCSG APC2 43.4 17 0.00057 30.2 3.2 46 71-116 33-84 (126)
153 3isy_A Bsupi, intracellular pr 41.0 1.4E+02 0.0049 24.2 10.8 73 47-130 21-99 (120)
154 2x3c_A Toxic extracellular end 40.7 55 0.0019 32.1 7.1 93 10-129 4-124 (343)
155 1xq4_A Protein APAG; all beta 40.6 22 0.00075 30.0 3.6 46 71-116 38-89 (139)
156 1v54_B Cytochrome C oxidase po 39.1 74 0.0025 29.1 7.3 76 59-148 139-215 (227)
157 2h7w_A Chagasin; beta-strands, 37.4 1.4E+02 0.0046 24.7 8.0 65 59-126 32-104 (131)
158 1tza_A APAG protein, SOR45; st 37.0 19 0.00066 30.1 2.7 46 71-116 33-84 (134)
159 1xwv_A DER F II; beta sheets, 32.2 70 0.0024 26.3 5.4 61 59-119 24-92 (129)
160 1x9u_A Umecyanin; cupredoxin, 29.4 52 0.0018 26.7 4.0 34 115-149 72-106 (116)
161 2c34_A ICP, inhibitor of cyste 29.1 95 0.0032 25.0 5.6 67 59-126 14-89 (116)
162 1x9u_A Umecyanin; cupredoxin, 28.4 55 0.0019 26.5 4.0 34 482-515 73-107 (116)
163 3rfr_A PMOB; membrane, oxidore 26.7 1.1E+02 0.0036 30.4 6.2 51 69-121 301-368 (419)
164 2r5o_A Putative ATP binding co 26.6 1.5E+02 0.0051 25.9 7.0 84 193-279 53-145 (188)
165 1nep_A EPV20, BNPC2, epididyma 25.5 88 0.003 25.7 4.9 62 59-120 25-95 (130)
166 2cio_B Inhibitor of cysteine p 24.0 2.2E+02 0.0075 23.0 6.9 30 59-88 12-41 (121)
167 1fft_B Ubiquinol oxidase; elec 23.4 70 0.0024 30.9 4.4 59 203-280 152-210 (315)
168 2qjv_A Uncharacterized IOLB-li 23.2 2.9E+02 0.01 25.8 8.5 60 214-278 51-110 (270)
169 1jer_A Cucumber stellacyanin; 21.9 1.2E+02 0.004 25.4 4.9 34 483-516 77-111 (138)
170 2wtp_A ORF131 protein, CZCE; m 21.3 27 0.00093 28.9 0.8 22 203-224 72-93 (131)
171 2p9r_A Alpha-2-M, alpha-2-macr 20.4 2.5E+02 0.0086 21.4 6.5 68 206-279 13-84 (102)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=5.6e-99 Score=816.64 Aligned_cols=490 Identities=30% Similarity=0.554 Sum_probs=395.0
Q ss_pred CeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-CCceeeeCCcCCCCCCCCCCCccc-CC
Q 009242 28 PYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQDGVLGT-NC 105 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-~~ 105 (539)
++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 6899999999999999999999999999999999999999999999999998 999999999999988999999999 99
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhhhcCC
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSG 185 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~ 185 (539)
+|.||++|+|+|++ +++||||||||...|+.+||+|+|||++++....+++ .|+|++|+++||+++....+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999997 7899999999999999999999999999865444553 368999999999998765544333221
Q ss_pred --CCCCCCceEEECCCCCc--------------------------eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEE
Q 009242 186 --KSLPFPDGVLINGQGHT--------------------------TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLV 237 (539)
Q Consensus 186 --~~~~~~~~~liNG~~~~--------------------------~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~vi 237 (539)
.....++.++|||+..+ .++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 12235789999999865 79999999999999999999999999999999999
Q ss_pred EecCccccceeeceEEEcCCceEEEEEEe-CCCCcceEEEEeeecc-cCccceEEEEEecCCCCC--CCCCCCCCCC-cc
Q 009242 238 EVEGSHTIQNIYDSLDVHVGQSVSVLVTL-NQPPKDYYIVASTRFT-KNVLTATAILHYTNSHSP--ASGPLPTGPT-YE 312 (539)
Q Consensus 238 a~DG~~~~p~~~d~l~l~pg~R~dv~v~~-~~~~g~~~~~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~-~~ 312 (539)
|+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|++..... .......|+|+|.+.... +..+.|..|. .+
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~ 319 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD 319 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999 4468999999987643 234567899999876531 1112222221 11
Q ss_pred cccccccccccccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCcc
Q 009242 313 IHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 392 (539)
Q Consensus 313 ~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~ 392 (539)
....... .++ .+....+.+. ....++++.|.......++...|+|||++|..++.|+|.+.+++++++|
T Consensus 320 ~~~~~~~--~l~-~l~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~ 388 (552)
T 1aoz_A 320 FDRSKNF--TYR-ITAAMGSPKP--------PVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAF 388 (552)
T ss_dssp HHHHHHH--HTT-CCBCTTCCCC--------CSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSS
T ss_pred ccccccc--ccc-ccccCCCCCC--------CCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCcccc
Confidence 1110000 011 1110001111 1235677777654332345678999999999999999988776666665
Q ss_pred ccCCCCC----------CCCCCCCCcceeEEEecCCcEEEEEEEcCCC------CCCceeecCCceEEEeeccCcCCccc
Q 009242 393 SVNSIQS----------VPSGGASSVATSVMQVNLHEYIEVVFQNNEK------TMQSWHLDGYDFWVVGYGSGQWAAEK 456 (539)
Q Consensus 393 ~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~ 456 (539)
+.+...+ .+.+...+.++.++.++.|++|||+|+|.+. +.||||||||+||||+++.|.|++..
T Consensus 389 ~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~ 468 (552)
T 1aoz_A 389 DQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE 468 (552)
T ss_dssp CCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG
T ss_pred ccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCccc
Confidence 5332211 0112234567888999999999999999873 46999999999999999988888744
Q ss_pred ccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCccccccccC
Q 009242 457 RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAV 535 (539)
Q Consensus 457 ~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 535 (539)
...+|+.+|.|||||.||++||++|||+|||||.|+|||||++|++.|||.+|.|... .++++|++++.|+.++
T Consensus 469 ~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA 542 (552)
T ss_dssp GGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred ccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhccC
Confidence 5678999999999999999999999999999999999999999999999999987543 2567899999999876
No 2
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.8e-95 Score=782.72 Aligned_cols=476 Identities=22% Similarity=0.323 Sum_probs=368.7
Q ss_pred cccCCCeEEEEEEEEEEeecCCCe-eeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-----CCceeeeCCcCCCCCCC
Q 009242 23 VKADDPYRFYTWTVTSGTLSPLGV-PQEVILINGQFPGPRLDVVTNDNIILNVINKLD-----QPFLLTWNGIKQRKNSW 96 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~G~-~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~ 96 (539)
....+...+|+|++++..+++||+ ++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.++++
T Consensus 17 ~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~ 96 (521)
T 1v10_A 17 SLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTE 96 (521)
T ss_dssp -----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGG
T ss_pred hhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCc
Confidence 334566788999999999999999 999999999999999999999999999999998 99999999999988899
Q ss_pred CCCCccc-CCccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCC-CCCCCCCCCceeEEeeeecccc
Q 009242 97 QDGVLGT-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRI-PIPYPIQDGDFTLLIGDWFKTN 174 (539)
Q Consensus 97 ~DG~~~~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~ 174 (539)
+||+|++ ||+|.||++|+|+|++++++||||||||.+.|+.+||+|+|||++++.. +.+|+..++|++|+++||+++.
T Consensus 97 ~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 97 MDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSL 176 (521)
T ss_dssp GSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC
T ss_pred cCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCC
Confidence 9999999 9999999999999998788999999999999999999999999986422 2235333479999999999987
Q ss_pred hHHHHhhhcCCCCCCCCceEEECCCCC----------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc
Q 009242 175 HKILRQTLDSGKSLPFPDGVLINGQGH----------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT 244 (539)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~liNG~~~----------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 244 (539)
+.++.. ..+...+.++.++|||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.++
T Consensus 177 ~~~~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 177 STVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp CC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred HHHHhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 765532 1223345689999999987 7999999999999999999999999999999999999999999
Q ss_pred cceeeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccC---ccceEEEEEecCCCCCCCCCCCCCCCccccccccccc
Q 009242 245 IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQAR 321 (539)
Q Consensus 245 ~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 321 (539)
+|..++++.|+|||||||+|++++.+|+|+|++....... .....++|+|.+.....+...+. +..+.+
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~~~~------- 326 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGTALN------- 326 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSCBCC-------
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cccccc-------
Confidence 9999999999999999999999977899999998653211 12236899998765321111000 000000
Q ss_pred ccccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCC
Q 009242 322 TFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVP 401 (539)
Q Consensus 322 ~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p 401 (539)
+.++.+....+.|... .....++++.+.... .+....|+|||++|..+..|+|++.... .....
T Consensus 327 --~~~l~p~~~~~~p~~~---~~~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~~g---~~~~~------ 390 (521)
T 1v10_A 327 --EANLIPLINPGAPGNP---VPGGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSG---VTNPN------ 390 (521)
T ss_dssp --GGGCCBSSCCCCSSCS---STTCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHT---CCCGG------
T ss_pred --hhhcccCCcccCCCcc---cCCcceEEEEEEEec--CCceeEEEECCCcccCCCCchhhhhhcC---Ccccc------
Confidence 0112221111111110 011244555554321 1122369999999998888887654321 11100
Q ss_pred CCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEe-CCCcEEE
Q 009242 402 SGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTV 480 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~~~ 480 (539)
+...++.++.++.|++|||+++| .+.||||||||+||||+++++. .+|+.+|.|||||.| |+++|++
T Consensus 391 ---~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~ 458 (521)
T 1v10_A 391 ---DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVT 458 (521)
T ss_dssp ---GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEE
T ss_pred ---cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEE
Confidence 12245678899999999999999 7899999999999999997653 367889999999999 8999999
Q ss_pred EEEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCC-CccccccccCCCC
Q 009242 481 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIP-SNILVCGKAVGHH 538 (539)
Q Consensus 481 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~ 538 (539)
|||+|||||.|+|||||++|++.|||..|.|...+. . +..++| .+.+.|.++....
T Consensus 459 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~-~-~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 459 FRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI-P-IANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp EEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH-H-HHSCCCHHHHTHHHHHTTCC
T ss_pred EEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch-h-hccCCChHHhhhchhhhccC
Confidence 999999999999999999999999999998855432 1 344445 5688999887653
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-94 Score=776.97 Aligned_cols=473 Identities=24% Similarity=0.341 Sum_probs=370.4
Q ss_pred CeEEEEEEEEEEeecCCC-eeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-CCceeeeCCcCCCCCCCCCCCccc-C
Q 009242 28 PYRFYTWTVTSGTLSPLG-VPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQDGVLGT-N 104 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~~G-~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-~ 104 (539)
++++|+|+|++..+++|| +++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 999999999999888999999999 9
Q ss_pred CccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhh-hc
Q 009242 105 CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQT-LD 183 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-~~ 183 (539)
|+|.||++|+|+|++.+++||||||||.+.|+.+||+|+|||++++ .+..+ |+|++|+|+||+++.+.++... +.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~-~p~~~---d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS-FPYDY---DEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT-CCSCC---SEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC-CCCCC---cceEEEEeeccccCCHHHHHHHHhc
Confidence 9999999999999986689999999999999999999999999975 23333 8899999999999987766432 22
Q ss_pred ---CCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceE
Q 009242 184 ---SGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSV 260 (539)
Q Consensus 184 ---~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~ 260 (539)
.....+.++.+||||+..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~ 236 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMNLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRY 236 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSSCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEE
T ss_pred cccCCCCCCCCceEEECCCCceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceE
Confidence 12334568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCC-CcceEEEEeeecc-------cCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCC
Q 009242 261 SVLVTLNQP-PKDYYIVASTRFT-------KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 332 (539)
Q Consensus 261 dv~v~~~~~-~g~~~~~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~ 332 (539)
||+|++++. .++|+|++..... .......++|+|.++...+. +.. ....... ..+. .+.+...
T Consensus 237 dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~---~~~-~~~~~~~---~~~~--~l~p~~~ 307 (534)
T 1zpu_A 237 TVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPT---QNY-VDSIDNF---LDDF--YLQPYEK 307 (534)
T ss_dssp EEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCC---CCC-CSCSSCS---CCGG--GCCBSSC
T ss_pred EEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCC---CCc-ccccccc---cccc--cceeCCC
Confidence 999999854 4789999875432 11345679999987542110 100 0000000 0000 1111111
Q ss_pred CCCCCCCccccccccceEEEEccccc-ccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCccee
Q 009242 333 RPNPQGSFHYGKINTTRTIVLANSAP-LINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATS 411 (539)
Q Consensus 333 ~p~p~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 411 (539)
.+. ....+|++.+..... ..++...|+|||++|..++.|+|++.+.. +.+.. .+. ....++.
T Consensus 308 ~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~-----~~~--~~~~~~~ 370 (534)
T 1zpu_A 308 EAI--------YGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQAN-----NSE--IYGSNTH 370 (534)
T ss_dssp CCC--------CCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGTT-----CGG--GGCSSSC
T ss_pred CCC--------CCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--CcccC-----CCc--ccCCCce
Confidence 111 123567776655432 12455679999999999999988754321 11110 010 0122467
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccC----------cCCcccccccCCCCCCcceEEEeCCCcEEEE
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG----------QWAAEKRRTYNLADTLTRHTAQVYPQSWTVI 481 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 481 (539)
++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++..... ...+|.|||||.|+|++|++|
T Consensus 371 ~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v~I 449 (534)
T 1zpu_A 371 TFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNFVI 449 (534)
T ss_dssp EEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEEEE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCCCEEEE
Confidence 789999999999999999999999999999999999864 444332222 246899999999999999999
Q ss_pred EEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCccc--CCCCCccc-cccc
Q 009242 482 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANE--YDIPSNIL-VCGK 533 (539)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~~p~~~~-~c~~ 533 (539)
||+|||||.|+|||||++|++.|||..|.+.. ++.. +. .++|++.. .|..
T Consensus 450 rF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-~~~~-~~~~~~~p~~~~~~C~~ 502 (534)
T 1zpu_A 450 RFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP-FGIQ-DAHSQQLSENHLEVCQS 502 (534)
T ss_dssp EEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHHH-HCGGGSCCHHHHHHHHH
T ss_pred EEEeCCCeeEEEEeCchhHhhcCCeEEEEECc-cccc-cccccCCChhHhhhhhc
Confidence 99999999999999999999999999998754 3322 22 45565544 5533
No 4
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=8.2e-95 Score=777.68 Aligned_cols=466 Identities=23% Similarity=0.359 Sum_probs=371.2
Q ss_pred CCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-CCceeeeCCcCCCCCCCCCCCccc-C
Q 009242 27 DPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQDGVLGT-N 104 (539)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-~ 104 (539)
+.+++|+|+|++..+.+||+++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|.+++++||+|++ |
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 46899999999999999999999999999999999999999999999999998 899999999999989999999999 9
Q ss_pred CccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCce-eEEeeeecccchHHHHhhhc
Q 009242 105 CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDF-TLLIGDWFKTNHKILRQTLD 183 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~ 183 (539)
|+|.||++|+|+|++ +++||||||||...|+.+||+|+|||++++. .+| |.|. +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHh
Confidence 999999999999997 5899999999999999999999999998653 345 7887 99999999998776654333
Q ss_pred CCCCCCCCceEEECCCCC-----------------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccc
Q 009242 184 SGKSLPFPDGVLINGQGH-----------------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ 246 (539)
Q Consensus 184 ~~~~~~~~~~~liNG~~~-----------------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p 246 (539)
. ...+.++.++|||+.. +.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|
T Consensus 219 ~-~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 L-GAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp T-SCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred c-cCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 2 2346789999999975 478999999999999999999999999999999999999999999
Q ss_pred eeeceEEEcCCceEEEEEEeCCCCcceEEEEeeeccc----CccceEEEEEecCCCCCCCCCCCCCCCcccccccccccc
Q 009242 247 NIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK----NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQART 322 (539)
Q Consensus 247 ~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 322 (539)
+.+++|.|+|||||||+|++++.+|+|+|++.....+ ......|||+|.++.... |..+..... ..+.+
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~---~~~~~ 370 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN----PTSVGTTPR---GTCED 370 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCC----CCCCCCCCC---CCSCC
T ss_pred eEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCC----CCCCCCCcc---chhhc
Confidence 9999999999999999999998889999999865422 134679999998754221 111100000 00111
Q ss_pred cc-cccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeec-CCCCchhcccccCCCCccccCCCCCC
Q 009242 323 FR-WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYV-NSDTPLKLADYFNIPGIFSVNSIQSV 400 (539)
Q Consensus 323 l~-~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~-~p~~p~l~~~~~~~~~~~~~~~~~~~ 400 (539)
.. ..|.+..+.+.| ...+.++.+... .++...|+|||.+|. .++.|+|++.+... ..
T Consensus 371 ~~~~~L~P~~~~~~~--------~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~---------~~- 429 (580)
T 3sqr_A 371 EPVASLVPHLALDVG--------GYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE---------TI- 429 (580)
T ss_dssp SCGGGCCBSSCCBCC--------SEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC---------CC-
T ss_pred ccccccccCCCCCCC--------CccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC---------cc-
Confidence 00 122222221111 112333333332 245678999999997 46889887543210 00
Q ss_pred CCCCCCCcceeEEEec----CCcEEEEEEEcCC--CCCCceeecCCceEEEeeccCcCCccc-ccccCCCCCCcceEEEe
Q 009242 401 PSGGASSVATSVMQVN----LHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQV 473 (539)
Q Consensus 401 p~~~~~~~~~~~~~~~----~g~~ve~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~p~~rDTv~v 473 (539)
......++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|++.. ...+|+.+|++|||+.|
T Consensus 430 -----~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v 504 (580)
T 3sqr_A 430 -----FPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAAL 504 (580)
T ss_dssp -----CCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEE
T ss_pred -----CCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEe
Confidence 11234555665 6999999999988 789999999999999999999998653 35789999999999999
Q ss_pred CCCcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCc-ccccccc
Q 009242 474 YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSN-ILVCGKA 534 (539)
Q Consensus 474 pp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 534 (539)
+++||++|||++||||.|+|||||++|++.||+.+|.+ .+++.. +..++|+. ...|..+
T Consensus 505 ~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i~-~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 505 PGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSIA-VKMTDTAIFEDTCANW 564 (580)
T ss_dssp CTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGCC-CCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHHh-hccCCcHHHHHhhHHH
Confidence 99999999999999999999999999999999999977 444432 23324444 5578654
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=7.1e-94 Score=762.15 Aligned_cols=465 Identities=21% Similarity=0.338 Sum_probs=362.2
Q ss_pred EEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCC-----CceeeeCCcCCCCCCCCCCCccc-
Q 009242 30 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQ-----PFLLTWNGIKQRKNSWQDGVLGT- 103 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~- 103 (539)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++++||+|++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999974 79999999999989999999999
Q ss_pred CCccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCC-CCCCCCCCCceeEEeeeecccchHHHHhhh
Q 009242 104 NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRI-PIPYPIQDGDFTLLIGDWFKTNHKILRQTL 182 (539)
Q Consensus 104 ~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 182 (539)
||+|.||++|+|+|++++++||||||||...|+.+||+|+|||++++.. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999998778999999999999999999999999986532 12344445678999999999876432
Q ss_pred cCCCCCCCCceEEECCCCC----------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceE
Q 009242 183 DSGKSLPFPDGVLINGQGH----------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSL 252 (539)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~----------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l 252 (539)
.+.....++++||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l 239 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEI 239 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeE
Confidence 122233679999999853 479999999999999999999999999999999999999999999999999
Q ss_pred EEcCCceEEEEEEeCCCCcceEEEEeeecccC---ccceEEEEEecCCCCCCCCCCCCCCCccccccccccccccccccc
Q 009242 253 DVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 329 (539)
Q Consensus 253 ~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~ 329 (539)
.|+|||||||+|++++.+|+|+|++....... .....|||+|.++....+...+ +.... .... +.+|.+
T Consensus 240 ~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~--~~~~~----~~~~--~~~L~p 311 (495)
T 3t6v_A 240 QIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVA--STVHT----KCLI--ETDLHP 311 (495)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCC--CSSCS----SBCC--GGGCCB
T ss_pred EEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCC--CCCCc----cccc--cccccc
Confidence 99999999999999977799999998653322 1234799999876432111100 00000 0000 012222
Q ss_pred CCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcc
Q 009242 330 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVA 409 (539)
Q Consensus 330 ~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 409 (539)
....+.|... .....++++.+.+.. ++ ..|+|||++|..++.|+|++.... .++.. +....
T Consensus 312 ~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~---------~~~~~ 372 (495)
T 3t6v_A 312 LSRNGVPGNP---HQGGADCNLNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICSG---ANTAA---------DLLPS 372 (495)
T ss_dssp SSCCCCSSCS---STTCSSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHTT---CCSST---------TSSST
T ss_pred cccccCCCcc---CCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhcC---CcCcc---------cccCC
Confidence 2111111100 111345666655432 12 269999999999999988765321 11100 12234
Q ss_pred eeEEEecCCcEEEEEEE-cCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCC-CcEEEEEEEeCC
Q 009242 410 TSVMQVNLHEYIEVVFQ-NNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDN 487 (539)
Q Consensus 410 ~~~~~~~~g~~ve~~i~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp-~g~~~irf~adn 487 (539)
+.++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||+|||
T Consensus 373 ~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adn 445 (495)
T 3t6v_A 373 GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDN 445 (495)
T ss_dssp TSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCS
T ss_pred cceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCC
Confidence 56889999999999998 667889999999999999987532 247889999999999997 899999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCc-cccccccC
Q 009242 488 QGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSN-ILVCGKAV 535 (539)
Q Consensus 488 pG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 535 (539)
||.|+|||||++|++.||+.+|. +++++.. +..++|+. ...|..|.
T Consensus 446 PG~W~~HCHi~~H~~~Gm~~~~~-e~~~~~~-~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 446 PGPWFLHCHIDWHLDAGFAIVFA-EDIPNTA-SANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEE-ETHHHHH-HHCCCCHHHHHHHHHHH
T ss_pred CeeEEEEecchhHhhcCCeEEEE-EChhHhc-cccCCCHHHHHHhhHhh
Confidence 99999999999999999999994 5555432 23344444 66887664
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.1e-93 Score=758.37 Aligned_cols=465 Identities=23% Similarity=0.374 Sum_probs=363.1
Q ss_pred EEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCC-----CceeeeCCcCCCCCCCCCCCccc-
Q 009242 30 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQ-----PFLLTWNGIKQRKNSWQDGVLGT- 103 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~- 103 (539)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++++||++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999974 79999999999989999999999
Q ss_pred CCccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCC-CCCCCCCCCceeEEeeeecccchHHHHhhh
Q 009242 104 NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRI-PIPYPIQDGDFTLLIGDWFKTNHKILRQTL 182 (539)
Q Consensus 104 ~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 182 (539)
||+|.||++|+|+|++++++||||||||...|+.+||+|+|||+++... ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999998778999999999999999999999999986432 1234344567899999999976532
Q ss_pred cCCCCCCCCceEEECCCCC---------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEE
Q 009242 183 DSGKSLPFPDGVLINGQGH---------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLD 253 (539)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~---------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~ 253 (539)
.+.....++++||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~ 237 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQ 237 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEE
Confidence 122233679999999863 5899999999999999999999999999999999999999999999999999
Q ss_pred EcCCceEEEEEEeCCCCcceEEEEeeecccC---ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccC
Q 009242 254 VHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330 (539)
Q Consensus 254 l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~ 330 (539)
|+|||||||+|++++.+|+|+|++....... .....|||+|+++....+......+..+. . +.+|.+.
T Consensus 238 i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~-------~--~~~L~p~ 308 (499)
T 3pxl_A 238 IFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPL-------N--EVDLHPL 308 (499)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSSBC-------C--GGGCCBS
T ss_pred ECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCccc-------c--ccccccc
Confidence 9999999999999977799999997643322 22357999998764321111000000000 0 0122222
Q ss_pred CCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcce
Q 009242 331 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVAT 410 (539)
Q Consensus 331 ~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 410 (539)
...+.|... .....++++.+.+.. ++ ..|+|||++|..|+.|+|++.+.. ..... +....+
T Consensus 309 ~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~---------~~~~~~ 369 (499)
T 3pxl_A 309 VSTPVPGAP---SSGGVDKAINMAFNF---NG-SNFFINGASFVPPTVPVLLQILSG---AQTAQ---------DLLPSG 369 (499)
T ss_dssp SCCCCSSCS---STTCSSEEEECCEEE---CS-SCEEETTBCCCCCSSCHHHHHHTT---CCSTT---------TSSSTT
T ss_pred ccccCCCcc---cCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCchhhhhhcC---Ccccc---------ccCCCc
Confidence 111111110 112356666665432 22 269999999999999988765321 11100 122345
Q ss_pred eEEEecCCcEEEEEEE---cCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCC---CcEEEEEEE
Q 009242 411 SVMQVNLHEYIEVVFQ---NNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP---QSWTVILVS 484 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp---~g~~~irf~ 484 (539)
.++.++.|++|||+|+ |.+.+.||||||||+|+||+.++. ..+|+.+|.||||+.||+ ++|++|||+
T Consensus 370 ~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ 442 (499)
T 3pxl_A 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFD 442 (499)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEE
T ss_pred eeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEE
Confidence 6889999999999999 556789999999999999986432 247889999999999997 999999999
Q ss_pred eCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCC-CCCccccccccCCC
Q 009242 485 LDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYD-IPSNILVCGKAVGH 537 (539)
Q Consensus 485 adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~-~p~~~~~c~~~~~~ 537 (539)
|||||.|+|||||++|++.||+.+| ++.+++.. +..+ |++....|..|...
T Consensus 443 adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~-~~~~~p~~~~~~C~~~~~~ 494 (499)
T 3pxl_A 443 TNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVK-AVNPVPQAWSDLCPTYDAL 494 (499)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHH-HHSCCCHHHHTHHHHHHTS
T ss_pred cCCCceEEEEeCChhHhhCCCcEEE-EEChhHhc-cccCCCHHHHHhhhHhhcc
Confidence 9999999999999999999999999 55665532 2333 44446788776543
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.2e-92 Score=756.17 Aligned_cols=461 Identities=26% Similarity=0.426 Sum_probs=363.2
Q ss_pred EEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-----CCceeeeCCcCCCCCCCCCCCccc-C
Q 009242 31 FYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-----QPFLLTWNGIKQRKNSWQDGVLGT-N 104 (539)
Q Consensus 31 ~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~-~ 104 (539)
.|+|++++..+++||+++++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999998 999999999999888999999999 9
Q ss_pred CccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCC-CCCCCCCCCceeEEeeeecccchHHHHhhhc
Q 009242 105 CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRI-PIPYPIQDGDFTLLIGDWFKTNHKILRQTLD 183 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 183 (539)
|+|.||++|+|+|++++++||||||||.+.|+.+||+|+|||+++... +.+|+..++|++|+++||+++.+.++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999998788999999999999999999999999986422 2335333479999999999987765421
Q ss_pred CCCCCCCCceEEECCCCC---------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEE
Q 009242 184 SGKSLPFPDGVLINGQGH---------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDV 254 (539)
Q Consensus 184 ~~~~~~~~~~~liNG~~~---------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l 254 (539)
.+.++.+||||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|..++++.|
T Consensus 162 ----~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l 237 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237 (503)
T ss_dssp ------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEE
T ss_pred ----CCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEE
Confidence 14579999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEEeCCCCcceEEEEeeecccC-------ccceEEEEEecCCCCCCCCCCCCCCC-cccccccccccccccc
Q 009242 255 HVGQSVSVLVTLNQPPKDYYIVASTRFTKN-------VLTATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWN 326 (539)
Q Consensus 255 ~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~l~~~ 326 (539)
+|||||||+|++++.+|+|+|++....... .....++|+|.++....+.. +..|. .+.+ . .+
T Consensus 238 ~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~~l~----~-----~~ 307 (503)
T 1hfu_A 238 FTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPAQLN----E-----AD 307 (503)
T ss_dssp CTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCCBCC----G-----GG
T ss_pred cccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccCCCc----c-----cc
Confidence 999999999999977899999998653211 12236999998765321111 00010 0000 0 11
Q ss_pred cccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCC
Q 009242 327 LTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGAS 406 (539)
Q Consensus 327 l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~ 406 (539)
+.+....+.|... .....++++.+.... ++. .|+|||++|..+..|+|++...+ .+... +.
T Consensus 308 l~p~~~~~~p~~~---~~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~g---~~~~~---------~~ 368 (503)
T 1hfu_A 308 LHALIDPAAPGIP---TPGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMSG---AQSAN---------DL 368 (503)
T ss_dssp CBBSSSCSCSSCS---STTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHTT---CCSGG---------GS
T ss_pred ccccCccCCCCcc---cCCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhcC---Ccccc---------cC
Confidence 2221111111110 011234455444321 122 69999999998888887764321 11100 12
Q ss_pred CcceeEEEecCCcEEEEEEEc-CCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEe-CCCcEEEEEEE
Q 009242 407 SVATSVMQVNLHEYIEVVFQN-NEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVS 484 (539)
Q Consensus 407 ~~~~~~~~~~~g~~ve~~i~N-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~~~irf~ 484 (539)
..++.++.++.|++|||+++| .+.+.||||||||+||||+++++. .+++.+|.|||||.| ||++|++|||+
T Consensus 369 ~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~ 441 (503)
T 1hfu_A 369 LPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFV 441 (503)
T ss_dssp SSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEE
T ss_pred CCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEE
Confidence 345778999999999999995 557899999999999999997653 357789999999999 99999999999
Q ss_pred eCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCC-CccccccccCCC
Q 009242 485 LDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIP-SNILVCGKAVGH 537 (539)
Q Consensus 485 adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~ 537 (539)
|||||.|+|||||++|++.|||..|.|...+. .+..++| .+.+.|..+...
T Consensus 442 adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 442 TDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHHHHHHTC
T ss_pred cCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhccchhhc
Confidence 99999999999999999999999998855432 1344445 558899887653
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=4.7e-91 Score=753.83 Aligned_cols=476 Identities=23% Similarity=0.340 Sum_probs=368.4
Q ss_pred cCCCeEEEEEEEEEEe--ecCCCee-eEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCCCCCCC
Q 009242 25 ADDPYRFYTWTVTSGT--LSPLGVP-QEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGV 100 (539)
Q Consensus 25 ~~~~~~~~~l~~~~~~--~~~~G~~-~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~ 100 (539)
+.+.+++|+|++++.. +.+||++ +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4566899999999999 8899998 9999999999999999999999999999999 6899999999999888999999
Q ss_pred ccc-CCccCC-CCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCce-eEEeeeecccchHH
Q 009242 101 LGT-NCPIPP-NSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDF-TLLIGDWFKTNHKI 177 (539)
Q Consensus 101 ~~~-~~~i~p-G~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~ 177 (539)
|++ ||+|.| |++|+|+|++ +++||||||||...|+.+||+|+|||++++. .+| |.|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHH
Confidence 999 999999 9999999997 6799999999999999999999999998653 345 7787 99999999998776
Q ss_pred HHhhhcCCCCCCCCceEEECCCCC---------ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcccccee
Q 009242 178 LRQTLDSGKSLPFPDGVLINGQGH---------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNI 248 (539)
Q Consensus 178 ~~~~~~~~~~~~~~~~~liNG~~~---------~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~ 248 (539)
+..... ....+.++.++|||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~ 261 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMT 261 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred Hhhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceE
Confidence 643222 22345678999999984 48999999999999999999999999999999999999999999999
Q ss_pred eceEEEcCCceEEEEEEeCCCCcceEEEEee--ec---ccCccceEEEEEecCCCCCCCCCCCCCCCccccccccccccc
Q 009242 249 YDSLDVHVGQSVSVLVTLNQPPKDYYIVAST--RF---TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTF 323 (539)
Q Consensus 249 ~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l 323 (539)
++++.|+|||||||+|++++.+|+|+|++.. .. ........++|+|.++....+...+. +..+. ...+.
T Consensus 262 ~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~-~~~~~-~~~~~---- 335 (559)
T 2q9o_A 262 VDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGT-PPVDH-QCLDT---- 335 (559)
T ss_dssp ESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCC-CCCCC-TTCCC----
T ss_pred eCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCC-cCCCc-ccccc----
Confidence 9999999999999999999778999999986 21 12234568999998764311111110 00000 00000
Q ss_pred ccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecC-CCCchhcccccCCCCccccCCCCCCCC
Q 009242 324 RWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVN-SDTPLKLADYFNIPGIFSVNSIQSVPS 402 (539)
Q Consensus 324 ~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~-p~~p~l~~~~~~~~~~~~~~~~~~~p~ 402 (539)
..+.+..+.+.|..+. ....++++.+.... ..++...|+|||++|.. +..|+|.+...+..
T Consensus 336 -~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~------------- 397 (559)
T 2q9o_A 336 -LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT------------- 397 (559)
T ss_dssp -SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-------------
T ss_pred -cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-------------
Confidence 1121111111111110 11123455544321 12345679999999975 46787654322110
Q ss_pred CCCCCcceeEEEecC-CcEEEEEEEcCC----CCCCceeecCCceEEEeecc---------CcCCccc-ccccCCCCCCc
Q 009242 403 GGASSVATSVMQVNL-HEYIEVVFQNNE----KTMQSWHLDGYDFWVVGYGS---------GQWAAEK-RRTYNLADTLT 467 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~-g~~ve~~i~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~~-~~~~~~~~p~~ 467 (539)
....+..++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++.. ...+++.+|.|
T Consensus 398 --~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~ 475 (559)
T 2q9o_A 398 --SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPR 475 (559)
T ss_dssp --CCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCE
T ss_pred --cCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCc
Confidence 0123456677765 577788888876 78999999999999999987 7776532 34688999999
Q ss_pred ceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCC--CC-ccccccccC
Q 009242 468 RHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDI--PS-NILVCGKAV 535 (539)
Q Consensus 468 rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 535 (539)
||||.||+++|++|||+|||||.|||||||++|++.|||..|.|...+. . +..++ |+ ..+.|..|.
T Consensus 476 RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~-~-~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 476 RDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL-R-QRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp ESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH-G-GGCCHHHHHHHHHHHHHHH
T ss_pred cceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchh-h-hccccCCchhhhhhccccc
Confidence 9999999999999999999999999999999999999999998854332 1 23333 44 578998764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.6e-86 Score=698.73 Aligned_cols=403 Identities=21% Similarity=0.283 Sum_probs=326.8
Q ss_pred cCCCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccC
Q 009242 25 ADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTN 104 (539)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 104 (539)
+.+++++|+|++++..++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 46678999999999999999999999999999999999999999999999999999999999999874 5899987
Q ss_pred CccCCCCeEEEEEEeC-CCccceeEccCcc----hhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHH
Q 009242 105 CPIPPNSNYTYKFQTK-DQIGSYFYFPSTL----MHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILR 179 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~-~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~ 179 (539)
+.|.||++|+|+|+++ +++||||||||.+ .|+.+||+|+|||+++.... +....++|++|+++||+++... +.
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTE-EC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCC-cC
Confidence 6799999999999984 4799999999974 79999999999999864321 1112378999999999997531 10
Q ss_pred hhhc-CCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc-cceeeceEEEcCC
Q 009242 180 QTLD-SGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVG 257 (539)
Q Consensus 180 ~~~~-~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d~l~l~pg 257 (539)
.... .......++.++|||+..+.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||+++ +|..++++.|+||
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pg 243 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGALRPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPG 243 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEESCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTT
T ss_pred CCCccccccCCCCCEEEECCccCCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCc
Confidence 0000 00012346899999999999999999 9999999999999999999999999999999997 8999999999999
Q ss_pred ceEEEEEEeCCCCcceEEEEeeeccc------------------CccceEEEEEecCCCCCCCCCCCCCCCccccccccc
Q 009242 258 QSVSVLVTLNQPPKDYYIVASTRFTK------------------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQ 319 (539)
Q Consensus 258 ~R~dv~v~~~~~~g~~~~~~~~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 319 (539)
|||||+|++++ +|+|++++...... ......++++|.+...+ .++|..
T Consensus 244 eR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~~----------- 309 (439)
T 2xu9_A 244 ERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPKA----------- 309 (439)
T ss_dssp CEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCSC-----------
T ss_pred eeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCccc-----------
Confidence 99999999995 99999999753221 11245678888765421 112210
Q ss_pred ccccccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCC
Q 009242 320 ARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS 399 (539)
Q Consensus 320 ~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~ 399 (539)
+.+....+.+ ..+|++.|.... .+ ..|+|||++|..+..+
T Consensus 310 -------l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~-------------------- 349 (439)
T 2xu9_A 310 -------LSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD-------------------- 349 (439)
T ss_dssp -------CCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC--------------------
T ss_pred -------CCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc--------------------
Confidence 0000001111 123677766543 11 2599999998643211
Q ss_pred CCCCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEE
Q 009242 400 VPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWT 479 (539)
Q Consensus 400 ~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~ 479 (539)
+.++.|++++|+|+|.+.+.||||||||+||||+++++++ .+|.|||||.|+|++++
T Consensus 350 -------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v 406 (439)
T 2xu9_A 350 -------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGEVA 406 (439)
T ss_dssp -------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTCEE
T ss_pred -------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCCEE
Confidence 4678999999999999999999999999999999976543 36899999999999999
Q ss_pred EEEEEeCCceeeEEEeechhhhhcccEEEEEEe
Q 009242 480 VILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 480 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
+|||++||||.|+|||||++|++.|||..|+|.
T Consensus 407 ~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 407 RLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999999999999999999999999999983
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.1e-85 Score=691.32 Aligned_cols=403 Identities=17% Similarity=0.185 Sum_probs=322.8
Q ss_pred CeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCc
Q 009242 28 PYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCP 106 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~ 106 (539)
.+++|+|++++..+++ +|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. .+||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG--PLMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCG--GGSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCC--CCCCCC--cCc
Confidence 4688999999999988 79999999999999999999999999999999999999999999998865 499999 799
Q ss_pred cCCCCeEEEEEEeCCCccceeEccCc----chhhccceeeEEEEecCCCCCCCCC--CCCCceeEEeeeecccchHHHHh
Q 009242 107 IPPNSNYTYKFQTKDQIGSYFYFPST----LMHRAAGGYGGINIYQRPRIPIPYP--IQDGDFTLLIGDWFKTNHKILRQ 180 (539)
Q Consensus 107 i~pG~~~~y~~~~~~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~ 180 (539)
|.||++|+|+|++.+++||||||||. ..|+++||+|+|||++++....+++ ..++|++|+++||+++.+.++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999986569999999998 5799999999999998754333222 25789999999999987655432
Q ss_pred hhcCCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEE-eCCeeEEEEecCccc-cceeeceEEEcCCc
Q 009242 181 TLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQ 258 (539)
Q Consensus 181 ~~~~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~~~d~l~l~pg~ 258 (539)
. ..+.....+++++|||+..+.++|++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|..++++.|+|||
T Consensus 173 ~-~~~~~~~~~d~~liNG~~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pge 250 (451)
T 2uxt_A 173 N-EPGSGGFVGDTLLVNGVQSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGE 250 (451)
T ss_dssp C-CCSSSCCCCSEEEETTEESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTC
T ss_pred c-cccCCCCcCCEEEECCcccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECcee
Confidence 1 122334567999999999999999999 9999999999999999999 899999999999987 79999999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeeccc-----------CccceEEEEEecCCCCCCCCCCCCCCCccccccccccccccccc
Q 009242 259 SVSVLVTLNQPPKDYYIVASTRFTK-----------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 327 (539)
Q Consensus 259 R~dv~v~~~~~~g~~~~~~~~~~~~-----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l 327 (539)
||||+|+++ .++.|++++...... ......++++|......... ....| ..|
T Consensus 251 R~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p---------------~~L 313 (451)
T 2uxt_A 251 RREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLP---------------MRL 313 (451)
T ss_dssp EEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC---------------SCS
T ss_pred EEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCc---------------ccc
Confidence 999999999 478999998654211 11233567888654321100 00001 011
Q ss_pred ccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCC
Q 009242 328 TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASS 407 (539)
Q Consensus 328 ~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~ 407 (539)
.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 314 ~~~~~~~~--------~~~~~~~~~l~~---------~~~iNg~~f~~~~~----------------------------- 347 (451)
T 2uxt_A 314 LPTEIMAG--------SPIRSRDISLGD---------DPGINGQLWDVNRI----------------------------- 347 (451)
T ss_dssp SSSCCCCC--------CCSEEEEEEECS---------SSSBTTBCCCTTCC-----------------------------
T ss_pred CCCCCCCC--------CCcceEEEEEee---------EEEECCEeCCCCCC-----------------------------
Confidence 11111110 123456666542 49999999864311
Q ss_pred cceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCC
Q 009242 408 VATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN 487 (539)
Q Consensus 408 ~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adn 487 (539)
.+.++.|++++|+|+|. +.||||||||+||||++++.. +++.+|.|||||.| +++++|+|+|||
T Consensus 348 ----~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~dn 411 (451)
T 2uxt_A 348 ----DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYFGQ 411 (451)
T ss_dssp ----CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEECCS
T ss_pred ----cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEeCC
Confidence 24678999999999997 789999999999999996532 45567999999999 899999999999
Q ss_pred cee----eEEEeechhhhhcccEEEEEEecCc
Q 009242 488 QGM----WNMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 488 pG~----w~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
||. |||||||++|++.|||..|+|.+.+
T Consensus 412 pg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 412 PSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp CCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred CCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 888 9999999999999999999997754
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=9e-83 Score=683.59 Aligned_cols=417 Identities=15% Similarity=0.177 Sum_probs=326.7
Q ss_pred CeEEEEEEEEEEe--ecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCC
Q 009242 28 PYRFYTWTVTSGT--LSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNC 105 (539)
Q Consensus 28 ~~~~~~l~~~~~~--~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~ 105 (539)
.+++|+|++++.. +.++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. ..+||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CC
Confidence 4589999999755 5678988999999999999999999999999999999999999999999875 4699988 79
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcc----hhhccceeeEEEEecCCCCCCCCCC--CCCceeEEeeeecccchHHHH
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTL----MHRAAGGYGGINIYQRPRIPIPYPI--QDGDFTLLIGDWFKTNHKILR 179 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~ 179 (539)
+|.||++|+|+|++.+++||||||||.+ .|+++||+|+|||++++....+++. .++|++|+|+||+++.++++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999986 5789999999999998765544433 367899999999998665432
Q ss_pred hhhcCC-CCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeC-------CeeEEEEecCcc-ccceeec
Q 009242 180 QTLDSG-KSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQG-------HTMKLVEVEGSH-TIQNIYD 250 (539)
Q Consensus 180 ~~~~~~-~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~g-------h~~~via~DG~~-~~p~~~d 250 (539)
. ..+ .....++.++|||+.++.++|++ ++|||||||+|+.+.+.|+|++ |+|+|||+||++ .+|..++
T Consensus 191 ~--~~~~~~~~~gd~~lvNG~~~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~ 267 (534)
T 3abg_A 191 T--TNGELNSFWGDVIHVNGQPWPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267 (534)
T ss_dssp C--CTTCSSCCCCSEEEETTEESCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEES
T ss_pred c--cCCCCccccCceeccCCccCceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEec
Confidence 1 112 12345789999999999999998 5999999999999999999987 999999999985 5899999
Q ss_pred eEEEcCCceEEEEEEeCCCCc-ceEEEEeee----cc--cCccceEEEEEecCCCCCCCCCCCCCCCccccccccccccc
Q 009242 251 SLDVHVGQSVSVLVTLNQPPK-DYYIVASTR----FT--KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTF 323 (539)
Q Consensus 251 ~l~l~pg~R~dv~v~~~~~~g-~~~~~~~~~----~~--~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l 323 (539)
+|.|+|||||||+|++++.+| +|+|+.... .. .......++++|.....+........|
T Consensus 268 ~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P-------------- 333 (534)
T 3abg_A 268 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP-------------- 333 (534)
T ss_dssp CEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC--------------
T ss_pred eEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc--------------
Confidence 999999999999999997677 699987431 10 111234578888755421000000001
Q ss_pred ccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCC
Q 009242 324 RWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSG 403 (539)
Q Consensus 324 ~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~ 403 (539)
..+.+. +.+.+ ....+|++.+.... ..|+|||++|..+..|++
T Consensus 334 -~~L~~~-~~p~~-------~~~~~~~~~~~~~~------~~w~iNG~~f~~~~~p~l---------------------- 376 (534)
T 3abg_A 334 -ANLRDV-PFPSP-------TTNTPRQFRFGRTG------PTWTINGVAFADVQNRLL---------------------- 376 (534)
T ss_dssp -CCCCCC-SCCCC-------CCCCCEEEECSCCC------STTCCCCBTTBCTTSCCC----------------------
T ss_pred -cccccC-CCCCC-------ccccceEEEEeccC------ceeEECCcccCCCCCcce----------------------
Confidence 011110 01111 11345677665421 249999999976544432
Q ss_pred CCCCcceeEEEecCCcEEEEEEEcCC-CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEE
Q 009242 404 GASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~g~~ve~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ir 482 (539)
+.++.|++++|+|+|.+ .+.||||||||+||||+++.+.+.. ...++.+ .|||||.|+|+++++||
T Consensus 377 ---------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~ 443 (534)
T 3abg_A 377 ---------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVE 443 (534)
T ss_dssp ---------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEE
T ss_pred ---------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEE
Confidence 24678999999999987 4699999999999999996553321 1234455 89999999999999999
Q ss_pred EE-eCCceeeEEEeechhhhhcccEEEEEEecCc
Q 009242 483 VS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 483 f~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
|+ +||||.|+|||||++|++.|||..|+|...+
T Consensus 444 ~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 444 AHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99 8999999999999999999999999998765
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.4e-82 Score=668.02 Aligned_cols=409 Identities=19% Similarity=0.229 Sum_probs=319.3
Q ss_pred ccCCCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc
Q 009242 24 KADDPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG 102 (539)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 102 (539)
.+.+++++|+|++++..+++ +|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++ ++++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc-
Confidence 35678899999999999986 699999999999999999999999999999999999999999999977 57899998
Q ss_pred cCCccCCCCeEEEEEEeCCC-ccceeEccCc----chhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHH
Q 009242 103 TNCPIPPNSNYTYKFQTKDQ-IGSYFYFPST----LMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKI 177 (539)
Q Consensus 103 ~~~~i~pG~~~~y~~~~~~~-~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 177 (539)
||+|.||++|+|+|+++++ +||||||||. ..|+++||+|+|||++++....++ ++++ |+++||+++.+++
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 7999999999999998543 7999999997 479999999999999976544444 4555 9999999986644
Q ss_pred HHhh-hcCCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc-cceeeceEEEc
Q 009242 178 LRQT-LDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVH 255 (539)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d~l~l~ 255 (539)
+... .........++.++|||+..+.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||.++ +|..++++.|+
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~ 274 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFKPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLS 274 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEESCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEEC
T ss_pred cccccchhhccCCcCCEEEECCccCceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEEC
Confidence 3200 00001123578999999999999999998 99999999999999999999999999998764 79999999999
Q ss_pred CCceEEEEEEeCCCCcceEEEEeeeccc-----CccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccC
Q 009242 256 VGQSVSVLVTLNQPPKDYYIVASTRFTK-----NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 330 (539)
Q Consensus 256 pg~R~dv~v~~~~~~g~~~~~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~ 330 (539)
|||||||+|+++ +++.|.+.+...... .......++++..... ..++|. .+.+.
T Consensus 275 pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~------------------~l~~~ 333 (481)
T 3zx1_A 275 PASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK------------------NLKIF 333 (481)
T ss_dssp TTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS------------------CSCCC
T ss_pred CccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc------------------cccCC
Confidence 999999999999 578898887543210 0112233333332211 112222 01111
Q ss_pred CCCCCCCCCccccccccceEEEEcccccccC-----Ce--------EEEEEcCeeecCCCCchhcccccCCCCccccCCC
Q 009242 331 AARPNPQGSFHYGKINTTRTIVLANSAPLIN-----GK--------LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSI 397 (539)
Q Consensus 331 ~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~-----~~--------~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~ 397 (539)
.+.+ .....|++.|........ +. ..|+|||+.|...
T Consensus 334 ~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~--------------------- 383 (481)
T 3zx1_A 334 KPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK--------------------- 383 (481)
T ss_dssp CCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT---------------------
T ss_pred CCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC---------------------
Confidence 1111 112456676654321000 01 1399999987421
Q ss_pred CCCCCCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEee--ccCcCCcccccccCCCCCCcceEEEeCC
Q 009242 398 QSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGY--GSGQWAAEKRRTYNLADTLTRHTAQVYP 475 (539)
Q Consensus 398 ~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~~~~~p~~rDTv~vpp 475 (539)
...+.++.|++|+|+|.|.+.+.|||||||++|||+++ ++.. ....++.|||||.|+|
T Consensus 384 ------------~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~--------~~~~~~~~kDTv~v~P 443 (481)
T 3zx1_A 384 ------------RIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKV--------QKAEFRALRDTINVRP 443 (481)
T ss_dssp ------------CCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEE--------EECSSCCEESEEEECT
T ss_pred ------------CceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCC--------CCcccCcccceEEECC
Confidence 11256889999999999999999999999999999998 4322 1233578999999999
Q ss_pred CcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEec
Q 009242 476 QSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 513 (539)
Q Consensus 476 ~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 513 (539)
+++++|+|+|||||.|+||||+++|+|.|||..|+|.+
T Consensus 444 g~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 444 NEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp TCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred CCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 99999999999999999999999999999999999963
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=5.9e-82 Score=677.16 Aligned_cols=426 Identities=15% Similarity=0.181 Sum_probs=323.1
Q ss_pred CCeEEEEEEEEEEeecC--CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCC----------------------Cc
Q 009242 27 DPYRFYTWTVTSGTLSP--LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQ----------------------PF 82 (539)
Q Consensus 27 ~~~~~~~l~~~~~~~~~--~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~----------------------~~ 82 (539)
.+..+|+|++++...++ ++.++++|+|||++|||+|||++||+|+|+|+|+|+. ++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~t 102 (513)
T 2wsd_A 23 KEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKT 102 (513)
T ss_dssp SSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCB
T ss_pred CCceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCc
Confidence 34566999999988654 4578999999999999999999999999999999975 89
Q ss_pred eeeeCCcCCCCCCCCCCCcc--c-CCccCCCCeE---EEEEEeCCCccceeEccCcc----hhhccceeeEEEEecCCCC
Q 009242 83 LLTWNGIKQRKNSWQDGVLG--T-NCPIPPNSNY---TYKFQTKDQIGSYFYFPSTL----MHRAAGGYGGINIYQRPRI 152 (539)
Q Consensus 83 ~iH~HG~~~~~~~~~DG~~~--~-~~~i~pG~~~---~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~ 152 (539)
+|||||+++. +++||+|+ + +|+|.||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++..
T Consensus 103 siHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~ 180 (513)
T 2wsd_A 103 VVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEK 180 (513)
T ss_dssp CEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGG
T ss_pred EEEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccc
Confidence 9999999874 67999996 4 8999999555 99999766799999999986 4899999999999997655
Q ss_pred CCCCCCCCCceeEEeeeecccchHHHHhhhc-----------CCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCC
Q 009242 153 PIPYPIQDGDFTLLIGDWFKTNHKILRQTLD-----------SGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGL 221 (539)
Q Consensus 153 ~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~ 221 (539)
+.+++..++|++|+|+||+++.++++..... .......++++||||+.++.++|+++ +|||||||+|+
T Consensus 181 ~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p~~~v~~~-~~RlRliNa~~ 259 (513)
T 2wsd_A 181 RLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPR-KYRFRVINASN 259 (513)
T ss_dssp GGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESCEEECCSS-EEEEEEEECCS
T ss_pred cccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccceEEecCC-EEEEEEEccCC
Confidence 4444456899999999999987654422110 00123457999999999999999984 89999999999
Q ss_pred CCeeeEEEeCC-eeEEEEecCccc-cceeeceEEEcCCceEEEEEEeCCCCcceE-EEEeeec--ccCccceEEEEEecC
Q 009242 222 STSFNFRIQGH-TMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYY-IVASTRF--TKNVLTATAILHYTN 296 (539)
Q Consensus 222 ~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~-~~~~~~~--~~~~~~~~ail~y~~ 296 (539)
.+.+.|+|+|| +|+|||+||+++ +|..++++.|+|||||||+|++++.+|.+. +...... ........++++|..
T Consensus 260 ~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~ 339 (513)
T 2wsd_A 260 TRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRV 339 (513)
T ss_dssp SCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEEC
T ss_pred cceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEEe
Confidence 99999999999 999999999998 799999999999999999999997678743 3322110 001123357888876
Q ss_pred CCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCC
Q 009242 297 SHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNS 376 (539)
Q Consensus 297 ~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p 376 (539)
+...........|. .+......+ . .....+|++.|..... ..+...|+|||++|..+
T Consensus 340 ~~~~~~~~~~~~p~---------------~l~~~~~~~--~-----~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~~ 396 (513)
T 2wsd_A 340 TKPLAQKDESRKPK---------------YLASYPSVQ--H-----ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHDP 396 (513)
T ss_dssp CSCCSSCCCCCCCS---------------BCSCCGGGC--C-----CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTSC
T ss_pred ccCcccCccCCCCc---------------cccCCCCcc--c-----CCCcceEEEEEEeecC-CCCCceEeECCccCCCc
Confidence 53211000000110 000000000 0 1113456666654322 13445799999988543
Q ss_pred CCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccC---cCC
Q 009242 377 DTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG---QWA 453 (539)
Q Consensus 377 ~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g---~~~ 453 (539)
. .+.++.|++++|+|+|.+.+.||||||||+||||+++.. .|+
T Consensus 397 ~----------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~ 442 (513)
T 2wsd_A 397 V----------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQ 442 (513)
T ss_dssp C----------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHH
T ss_pred c----------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCccccccc
Confidence 1 024578999999999999999999999999999999752 222
Q ss_pred cccccccCC---------CCCCcceEEEeCCCcEEEEEEEe-CCceeeEEEeechhhhhcccEEEEEEecC
Q 009242 454 AEKRRTYNL---------ADTLTRHTAQVYPQSWTVILVSL-DNQGMWNMRSAIWERQYLGQQFYLKVWNA 514 (539)
Q Consensus 454 ~~~~~~~~~---------~~p~~rDTv~vpp~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 514 (539)
+.. .+++ .++.|||||.|+|+++++|+|+| ||||.|+|||||++|++.|||..|+|.++
T Consensus 443 ~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 443 ESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp HHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred ccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 111 1222 24569999999999999999999 78999999999999999999999999764
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.6e-80 Score=682.71 Aligned_cols=443 Identities=14% Similarity=0.129 Sum_probs=313.2
Q ss_pred cCCCeEEEEEEEEEEeec--CCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCC---------------------
Q 009242 25 ADDPYRFYTWTVTSGTLS--PLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQP--------------------- 81 (539)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~--~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~--------------------- 81 (539)
+....+.|+|++++...+ +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 28 ~~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 28 SDEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp CSCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGG
T ss_pred cCCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccc
Confidence 345567889998887765 466788999999999999999999999999999999654
Q ss_pred --------------------ceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc----hhhc
Q 009242 82 --------------------FLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL----MHRA 137 (539)
Q Consensus 82 --------------------~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~----~~~~ 137 (539)
++|||||+++ ++.+||++ ||+|.||++|+|+|++.+++||||||||.+ .|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~--~~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~ 183 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQT--GGGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCC--CTTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCCCceEEcCCCcc--CCcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhh
Confidence 6789999977 46799988 899999999999999866689999999974 7999
Q ss_pred cceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhh--h-------cC--------CCCCCCCceEEECCCC
Q 009242 138 AGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQT--L-------DS--------GKSLPFPDGVLINGQG 200 (539)
Q Consensus 138 ~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~--~-------~~--------~~~~~~~~~~liNG~~ 200 (539)
+||+|+|||++++....+.+..++|++|+|+||+++.+...... + .. ......++.++|||+.
T Consensus 184 ~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~ 263 (612)
T 3gyr_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc
Confidence 99999999998766666666779999999999998765432211 0 00 0122346899999999
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeeEEEeCC-------eeEEEEecCcccc-cee------eceEEEcCCceEEEEEEe
Q 009242 201 HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGH-------TMKLVEVEGSHTI-QNI------YDSLDVHVGQSVSVLVTL 266 (539)
Q Consensus 201 ~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~~-p~~------~d~l~l~pg~R~dv~v~~ 266 (539)
++.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.+++ |+. +++|.|+|||||||+|++
T Consensus 264 ~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~ 342 (612)
T 3gyr_A 264 WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEEC
Confidence 99999986 58999999999999999999998 5999999999983 544 458999999999999999
Q ss_pred CCCCcceEEEEeeeccc--------CccceEEEEEecCCCCC--CCCCCCCCCCcccc---cccccccccccccccCCCC
Q 009242 267 NQPPKDYYIVASTRFTK--------NVLTATAILHYTNSHSP--ASGPLPTGPTYEIH---WSMKQARTFRWNLTANAAR 333 (539)
Q Consensus 267 ~~~~g~~~~~~~~~~~~--------~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~---~~~~~~~~l~~~l~~~~~~ 333 (539)
++.+|.++......... .......+++|...... ....+|........ .......... ... .
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~----~ 417 (612)
T 3gyr_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLT----P 417 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEE----C
T ss_pred CCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-ccc----c
Confidence 97777655444322111 01223455666433221 11112211000000 0000000000 000 0
Q ss_pred CCCCCCccccccccceEEEEcccc----------------cccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCC
Q 009242 334 PNPQGSFHYGKINTTRTIVLANSA----------------PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSI 397 (539)
Q Consensus 334 p~p~~~~~~~~~~~~r~~~l~~~~----------------~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~ 397 (539)
+.... .........+.... ........|.+|++.|
T Consensus 418 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~------------------------ 468 (612)
T 3gyr_A 418 PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF------------------------ 468 (612)
T ss_dssp TTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST------------------------
T ss_pred ccccc-----ccccccccccccccccccccccccceeeeccCCCccccccccCccC------------------------
Confidence 00000 00000000000000 0001122334443332
Q ss_pred CCCCCCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcc----------------cccccC
Q 009242 398 QSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------------KRRTYN 461 (539)
Q Consensus 398 ~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~----------------~~~~~~ 461 (539)
.....+.++.|++++|+|+|.+.+.||||||||+||||+++++.+... .....+
T Consensus 469 ----------~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (612)
T 3gyr_A 469 ----------NDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLA 538 (612)
T ss_dssp ----------TSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCC
T ss_pred ----------CCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcc
Confidence 122346789999999999999999999999999999999875433211 112345
Q ss_pred CCCCCcceEEEeCCCcEEEEEEE-eCCceeeEEEeechhhhhcccEEEEEEecCcc
Q 009242 462 LADTLTRHTAQVYPQSWTVILVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 462 ~~~p~~rDTv~vpp~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (539)
..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+|+.
T Consensus 539 ~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 539 PNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp TTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 67889999999999999999999 78999999999999999999999999998865
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.1e-80 Score=655.56 Aligned_cols=382 Identities=18% Similarity=0.248 Sum_probs=300.1
Q ss_pred EEECCC-CCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEc
Q 009242 51 ILINGQ-FPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYF 129 (539)
Q Consensus 51 ~~~nG~-~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH 129 (539)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|.||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999874 67999997 9999999999999986579999999
Q ss_pred cC----cchhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhhh--cCCCCCCCCceEEECCCCCce
Q 009242 130 PS----TLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTL--DSGKSLPFPDGVLINGQGHTT 203 (539)
Q Consensus 130 ~H----~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~liNG~~~~~ 203 (539)
|| +..|+++||+|+|||++++.. .+++...+|++|+++||+++. +++.... ........++.++|||+..+.
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~p~ 181 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKDAV 181 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEETCE
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcccce
Confidence 99 568999999999999997654 222222389999999999986 4432200 001122457899999999999
Q ss_pred EEEecCCEEEEEEEecCCCCeeeEEE--eC---CeeEEEEecCcccc-ceeeceEEEcCCceEEEEEEeCCCCcceEEEE
Q 009242 204 FNGDQGKTYMFRISNVGLSTSFNFRI--QG---HTMKLVEVEGSHTI-QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVA 277 (539)
Q Consensus 204 l~v~~G~~~rlRliN~~~~~~~~~~l--~g---h~~~via~DG~~~~-p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~ 277 (539)
++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||++++ |..++++.|+|||||||+|+++ .+.|++++
T Consensus 182 ~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~ 258 (448)
T 3aw5_A 182 FKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKN 258 (448)
T ss_dssp EEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEE
T ss_pred EEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEc
Confidence 999999 9999999999999999999 99 99999999999998 9999999999999999999998 37899998
Q ss_pred eeecc--------------cCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcccc
Q 009242 278 STRFT--------------KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYG 343 (539)
Q Consensus 278 ~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~ 343 (539)
..... .......++++|.+...... |. .+.. .|.+. .
T Consensus 259 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~------------------~L~~---lp~~~-----~ 309 (448)
T 3aw5_A 259 TPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---VE------------------ALSD---PPPEP-----P 309 (448)
T ss_dssp CCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---CC------------------CCSC---CCCCC-----C
T ss_pred cccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---cc------------------ccCC---CCCCC-----C
Confidence 75421 01123456777765432110 11 0100 00000 0
Q ss_pred ccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEE-ecCCcEEE
Q 009242 344 KINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQ-VNLHEYIE 422 (539)
Q Consensus 344 ~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~~ve 422 (539)
....+|++.|.... ..|+|||++|..+ .|. +. ++.|++++
T Consensus 310 ~~~~~~~~~l~~~~------~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~~v~ 350 (448)
T 3aw5_A 310 KPTRTRRFALSLSG------MQWTINGMFWNAS-NPL--------------------------------FEHVSVEGVEL 350 (448)
T ss_dssp CCSEEEEEEEEEET------TEEEETTBCCCTT-CTT--------------------------------CCCEEECEEEE
T ss_pred CCCceEEEEEeCCC------ceeeECCCcCCCC-CCc--------------------------------eeccCCCCeEE
Confidence 12356777776522 2499999998642 111 23 67899999
Q ss_pred EEEEcCC-CCCCceeecCCceEEEeeccCcCCc-cccccc----CCCCCCcceEEEeCCCcEEEEE--EE---eCCceee
Q 009242 423 VVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAA-EKRRTY----NLADTLTRHTAQVYPQSWTVIL--VS---LDNQGMW 491 (539)
Q Consensus 423 ~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~-~~~~~~----~~~~p~~rDTv~vpp~g~~~ir--f~---adnpG~w 491 (539)
|+|+|.+ .+.||||||||+||||++++ .+.. ...+.+ +..++.|||||.|+|+++++|+ |+ +||| |
T Consensus 351 ~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w 427 (448)
T 3aw5_A 351 WEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--F 427 (448)
T ss_dssp EEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--E
T ss_pred EEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--E
Confidence 9999998 89999999999999999953 3321 111122 2345679999999999999766 88 8899 9
Q ss_pred EEEeechhhhhcccEEEEEEe
Q 009242 492 NMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~ 512 (539)
+|||||++|++.|||..|+|.
T Consensus 428 ~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 428 PFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEESSHHHHHTTCEEEEEEC
T ss_pred EEEcCChHHHhCCCceEEEeC
Confidence 999999999999999999983
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=4.2e-80 Score=651.65 Aligned_cols=412 Identities=18% Similarity=0.240 Sum_probs=311.4
Q ss_pred CCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCc
Q 009242 27 DPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCP 106 (539)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~ 106 (539)
...+.|+|++++..++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||+| ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 446789999999999999999999999999999999999999999999999999999999999875 5699998 799
Q ss_pred cCCCCeEEEEEEeCCCccceeEccCc----chhhccceeeEEEEecCCCCCCCCC--CCCCceeEEeeeecccchHHHHh
Q 009242 107 IPPNSNYTYKFQTKDQIGSYFYFPST----LMHRAAGGYGGINIYQRPRIPIPYP--IQDGDFTLLIGDWFKTNHKILRQ 180 (539)
Q Consensus 107 i~pG~~~~y~~~~~~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~ 180 (539)
|.||++|+|+|++.+++||||||||. ..|+++||+|+|||++++....+++ ...+|++|+++||+++.++++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999986558999999997 3799999999999998754433332 23569999999999976554321
Q ss_pred hhc--CCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEE-eCCeeEEEEecCccc-cceeeceEEEcC
Q 009242 181 TLD--SGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHV 256 (539)
Q Consensus 181 ~~~--~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~~~d~l~l~p 256 (539)
... .......++.++|||+.+|.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+.+++|.|+|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~p 249 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIYPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 249 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSSCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred cccccccccCCCCCEEEEcCCcCccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECC
Confidence 110 00112457899999999998887 4689999999999999999999 699999999999986 899999999999
Q ss_pred CceEEEEEEeCCCCcceEEEEeeecccC-----ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCC
Q 009242 257 GQSVSVLVTLNQPPKDYYIVASTRFTKN-----VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANA 331 (539)
Q Consensus 257 g~R~dv~v~~~~~~g~~~~~~~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~ 331 (539)
||||||+|+++ +.+.|.+++....... ......+++......+....+|. .|....
T Consensus 250 GeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~~ 310 (488)
T 3od3_A 250 GERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSSLP 310 (488)
T ss_dssp TCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCCCC
T ss_pred CCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc------------------ccccCC
Confidence 99999999999 5778988875432110 00111222222111000011111 011000
Q ss_pred CCCCCCCCccccccccceEEEEcccc-------------------c----------ccCCe-------------EEEEEc
Q 009242 332 ARPNPQGSFHYGKINTTRTIVLANSA-------------------P----------LINGK-------------LRYAVN 369 (539)
Q Consensus 332 ~~p~p~~~~~~~~~~~~r~~~l~~~~-------------------~----------~~~~~-------------~~~~iN 369 (539)
..+ . ......|++.|.+.. . ...+. ..|+||
T Consensus 311 ~~~--~-----~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~IN 383 (488)
T 3od3_A 311 ALP--S-----LEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKIN 383 (488)
T ss_dssp CCC--C-----CTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEET
T ss_pred CCc--c-----cccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeEC
Confidence 001 0 011234555553210 0 00010 138999
Q ss_pred CeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEEEcCC-CCCCceeecCCceEEEeec
Q 009242 370 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYG 448 (539)
Q Consensus 370 g~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~-~~~HP~HlHG~~F~Vl~~~ 448 (539)
|+.|... .| .+.++.|++++|.|.|.+ .+.|||||||++|+|++++
T Consensus 384 G~~~~~~-~~--------------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~ 430 (488)
T 3od3_A 384 GQAFDMN-KP--------------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSEN 430 (488)
T ss_dssp TBCCCTT-CC--------------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBT
T ss_pred CeeCCCC-CC--------------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccC
Confidence 9988532 11 156789999999999988 7899999999999999997
Q ss_pred cCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeC----CceeeEEEeechhhhhcccEEEEEE
Q 009242 449 SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD----NQGMWNMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 449 ~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 511 (539)
+.... ..++.|||||.|+ +++++|+|+|+ +||.||||||+|+|||.|||..|+|
T Consensus 431 g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 431 GKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp TBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 54322 2346799999999 99999999985 4789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.6e-78 Score=652.36 Aligned_cols=443 Identities=15% Similarity=0.153 Sum_probs=318.9
Q ss_pred CCCeEEEEEEEEEEeecC--CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCC----------------------
Q 009242 26 DDPYRFYTWTVTSGTLSP--LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQP---------------------- 81 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~--~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~---------------------- 81 (539)
..+.++|+|++++....+ ++.++++|+|||++|||+|+|++||+|+|+++|+|+..
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 455789999999988764 45689999999999999999999999999999999753
Q ss_pred -------------------ceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc----hhhcc
Q 009242 82 -------------------FLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL----MHRAA 138 (539)
Q Consensus 82 -------------------~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~----~~~~~ 138 (539)
+++||||+++. +.+||++ ||+|.||++++|+|++.+++||||||||.+ .|+++
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCC--CccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 89999999875 4599998 799999999999999766799999999997 49999
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHH--HHhh-------hcC---C-C----CCCCCceEEECCCCC
Q 009242 139 GGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKI--LRQT-------LDS---G-K----SLPFPDGVLINGQGH 201 (539)
Q Consensus 139 Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--~~~~-------~~~---~-~----~~~~~~~~liNG~~~ 201 (539)
||+|+|||++++....+++.+++|++|+|+||+++.+.+ +... ++. + . ....++.+||||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999876555445557999999999999986532 1100 011 1 0 124579999999999
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeeEEEeCC-------eeEEEEecCccc-cceeec------eEEEcCCceEEEEEEeC
Q 009242 202 TTFNGDQGKTYMFRISNVGLSTSFNFRIQGH-------TMKLVEVEGSHT-IQNIYD------SLDVHVGQSVSVLVTLN 267 (539)
Q Consensus 202 ~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~l~l~pg~R~dv~v~~~ 267 (539)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||||||+|+++
T Consensus 265 p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~ 343 (612)
T 2g23_A 265 PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFR 343 (612)
T ss_dssp CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECT
T ss_pred CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECC
Confidence 99999999 9999999999999999999999 899999999999 599999 99999999999999999
Q ss_pred CCCc-ceEEEEeeecccC-------ccceEEEEEecCCCC--CCCCCCCCCCCcccc-cccccccccccccccCCCCCCC
Q 009242 268 QPPK-DYYIVASTRFTKN-------VLTATAILHYTNSHS--PASGPLPTGPTYEIH-WSMKQARTFRWNLTANAARPNP 336 (539)
Q Consensus 268 ~~~g-~~~~~~~~~~~~~-------~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~-~~~~~~~~l~~~l~~~~~~p~p 336 (539)
+.+| ++.|+........ ......|+++..... ..+..+|..-..... .........+..+. .+ |
T Consensus 344 ~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~~----~~-~ 418 (612)
T 2g23_A 344 ALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVL----TP-P 418 (612)
T ss_dssp TCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEE----CC-T
T ss_pred CCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEEee----cc-c
Confidence 7666 5777765321100 001113554443221 111122221000000 00000000000000 00 0
Q ss_pred CCCccccccccceEEEEccc--c-------------cccCC-eEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCC
Q 009242 337 QGSFHYGKINTTRTIVLANS--A-------------PLING-KLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSV 400 (539)
Q Consensus 337 ~~~~~~~~~~~~r~~~l~~~--~-------------~~~~~-~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~ 400 (539)
.. .......+.+.+... . ...+| ...|+|||+.|...
T Consensus 419 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~------------------------ 471 (612)
T 2g23_A 419 GT---KGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG------------------------ 471 (612)
T ss_dssp TC---TTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC------------------------
T ss_pred cc---cccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC------------------------
Confidence 00 000000011111100 0 00012 24577888776421
Q ss_pred CCCCCCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcc----------------cccccCCCC
Q 009242 401 PSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------------KRRTYNLAD 464 (539)
Q Consensus 401 p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~----------------~~~~~~~~~ 464 (539)
..+.++.|++|+|+|.|.+.+.|||||||+.|||++++...++.. ....++..+
T Consensus 472 ----------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e 541 (612)
T 2g23_A 472 ----------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNE 541 (612)
T ss_dssp ----------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTS
T ss_pred ----------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCccc
Confidence 225688999999999999999999999999999999864322110 012245566
Q ss_pred CCcceEEEeCCCcEEEEEEEeC-CceeeEEEeechhhhhcccEEEEEEecCc
Q 009242 465 TLTRHTAQVYPQSWTVILVSLD-NQGMWNMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 465 p~~rDTv~vpp~g~~~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
+.|||||.|+|+++++|+|+|+ |||.|||||||++|+|.|||..|+|.+.+
T Consensus 542 ~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 542 LGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp SSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 7899999999999999999999 99999999999999999999999997653
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6.2e-54 Score=493.83 Aligned_cols=388 Identities=14% Similarity=0.199 Sum_probs=267.8
Q ss_pred cccCCCeEEEEEEEEEEee--cCCCe--------------------------eeEEE-------EECCC--------CCC
Q 009242 23 VKADDPYRFYTWTVTSGTL--SPLGV--------------------------PQEVI-------LINGQ--------FPG 59 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~--~~~G~--------------------------~~~~~-------~~nG~--------~pg 59 (539)
..+.+.+|+|.+.|.+..+ ++.|. .++.. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 5566789999999999775 34332 22333 57877 999
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCC----CCCCCCCCcc--c-CCccCCCCeEEEEEEeCCC---------c
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQR----KNSWQDGVLG--T-NCPIPPNSNYTYKFQTKDQ---------I 123 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~----~~~~~DG~~~--~-~~~i~pG~~~~y~~~~~~~---------~ 123 (539)
|+||+++||+|+|+|+|.|+++++|||||+++. +.++.||+++ + ||+|.||++|+|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999886 4467888887 6 9999999999999998654 4
Q ss_pred cceeEccCcch--hhccceeeEEEEecCCCCCCCCC-CCCCceeEEeee------ecccchHHHHhhh-cCCCC----C-
Q 009242 124 GSYFYFPSTLM--HRAAGGYGGINIYQRPRIPIPYP-IQDGDFTLLIGD------WFKTNHKILRQTL-DSGKS----L- 188 (539)
Q Consensus 124 Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d------~~~~~~~~~~~~~-~~~~~----~- 188 (539)
||||||||.+. |+++||+|+|||++++....|.+ ..|+|++|+++| |++... +..++ +.+.. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999984 56899999999999765433322 348899999994 554321 11111 11100 0
Q ss_pred --CCCceEEECCCCC---ceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEE
Q 009242 189 --PFPDGVLINGQGH---TTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSV 262 (539)
Q Consensus 189 --~~~~~~liNG~~~---~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv 262 (539)
..++.++|||+.+ +.++|++|++|||||+|+|.. ..+.|||+||+|++ +|..+|++.|+||||+||
T Consensus 253 ~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGer~dV 324 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPATLFDA 324 (1065)
T ss_dssp HHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTCEEEE
T ss_pred ccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCcEEEE
Confidence 0235799999984 589999999999999999986 58899999999993 678999999999999999
Q ss_pred EEEeCCCCcceEEEEeeecccCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCC------CCCC
Q 009242 263 LVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA------RPNP 336 (539)
Q Consensus 263 ~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~------~p~p 336 (539)
+|++++ +|.|+|+|+..... ...-.+.++|.+...+.+.+.|..+ .... -+..++.+++++.+... .+++
T Consensus 325 lv~~~~-pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~-~~~~-~~i~A~e~~wdy~~~~~~~~~~~~~~~ 400 (1065)
T 2j5w_A 325 YMVAQN-PGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGK-HVRH-YYIAAEEIIWNYAPSGIDIFTKENLTA 400 (1065)
T ss_dssp EEECCS-CEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTS-EEEE-EEEEEEEEEEESCTTSBCTTTCCBTTC
T ss_pred EEEeCC-CeeEEEEecCcchh-hCCCEEEEEEecCCCcccccccccc-ceeE-EEEeceecccccCCCCcccccccccCC
Confidence 999994 99999999975322 1234667888765543333333321 0111 24456667777665432 1122
Q ss_pred CCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEec
Q 009242 337 QGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN 416 (539)
Q Consensus 337 ~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 416 (539)
.++ ..+.+ |..+....++.....++ +.|... +|+.. .+..|......--++++.++
T Consensus 401 ~~s-------~~~~~-l~~~~~~ig~~y~k~v~-~~y~d~--------------~f~~~-~~~~~~~~~~g~lgpvi~a~ 456 (1065)
T 2j5w_A 401 PGS-------DSAVF-FEQGTTRIGGSYKKLVY-REYTDA--------------SFTNR-KERGPEEEHLGILGPVIWAE 456 (1065)
T ss_dssp TTC-------TTHHH-HCCBTTBCCSEEEEEEE-EEESST--------------TCCSB-CCCCGGGGGGTTSCCCEEEE
T ss_pred Ccc-------cchhh-hccCCcccCceEeeeee-ecccCC--------------ceEEc-CcCCcccccccccCceEEEe
Confidence 211 11122 33322234455545555 455421 22221 11111100112235689999
Q ss_pred CCcEEEEEEEcCCCCCCceeecCCceEEEeec
Q 009242 417 LHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYG 448 (539)
Q Consensus 417 ~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~ 448 (539)
.|+++++++.|.....|+||+||+.|++++.|
T Consensus 457 ~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 457 VGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp TTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred CCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 99999999999999999999999999987653
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=6.6e-54 Score=431.82 Aligned_cols=264 Identities=19% Similarity=0.319 Sum_probs=224.7
Q ss_pred CeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-CC
Q 009242 28 PYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-NC 105 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~~ 105 (539)
.+|+|+|++++..+++ +|.++.+|+|||++|||+|||++||+|+|+|+|.++.+++|||||+++.++.++||+|++ ||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3789999999999886 588999999999999999999999999999999999999999999998877899999998 99
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcchh--h-ccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhhh
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLMH--R-AAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTL 182 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~--~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 182 (539)
+|.||++++|+|++ +++||||||||.+.+ . .+||+|+|||++++..+.+. ..++|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999997 689999999999844 3 58999999999865332111 348899999999987543211 1
Q ss_pred cCCCCCCCCceEEECCCCCc---eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc-cceeeceEEEcCCc
Q 009242 183 DSGKSLPFPDGVLINGQGHT---TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQ 258 (539)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~---~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d~l~l~pg~ 258 (539)
..+.....+++++|||+.++ .+++++|++|||||+|++.. .++|||+||.|+||+.||.++ +|..+|++.|.|||
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pge 234 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGE 234 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred cCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCC
Confidence 11222335789999999987 49999999999999999976 679999999999999999997 68899999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeecccCc-----cceEEEEEecCCC
Q 009242 259 SVSVLVTLNQPPKDYYIVASTRFTKNV-----LTATAILHYTNSH 298 (539)
Q Consensus 259 R~dv~v~~~~~~g~~~~~~~~~~~~~~-----~~~~ail~y~~~~ 298 (539)
|+||+++++ +||.|.++||....... ..-.++|+|++..
T Consensus 235 r~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 235 RYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999 79999999997643321 2346789998754
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-55 Score=488.93 Aligned_cols=238 Identities=16% Similarity=0.209 Sum_probs=182.1
Q ss_pred eEEEEEEEEEEeecCC-CeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc-----
Q 009242 29 YRFYTWTVTSGTLSPL-GVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG----- 102 (539)
Q Consensus 29 ~~~~~l~~~~~~~~~~-G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~----- 102 (539)
+-...|.++..+.... |+.+..|+ ++|||+|||++||+|+|+|+|.|+++++|||||+++. ..+||+|+
T Consensus 46 ~y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~ 120 (742)
T 2r7e_A 46 VYKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYW--KASEGAEYDDQTS 120 (742)
T ss_dssp CEECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCC--SSSSCCCSSCSCC
T ss_pred EEEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccC--ccccCCccCCCCc
Confidence 3444566666555554 66666654 8999999999999999999999999999999999874 34555553
Q ss_pred ---c-CCccCCCCeEEEEEEeCC---------CccceeEccCcch--hhccceeeEEEEecCCCCCCCCCCCCCceeEEe
Q 009242 103 ---T-NCPIPPNSNYTYKFQTKD---------QIGSYFYFPSTLM--HRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLI 167 (539)
Q Consensus 103 ---~-~~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l 167 (539)
+ ||+|.||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++...........+|++|++
T Consensus 121 ~~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~ 200 (742)
T 2r7e_A 121 QREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLF 200 (742)
T ss_dssp SSSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCE
T ss_pred ccccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEe
Confidence 5 999999999999999843 4699999999984 899999999999987543221111238888887
Q ss_pred ee------ecccchHHHHhhhcCCCCCCCCceEEECCCCC---ceEEEecCCEEEEEEEecCCCC-eeeEEEeCCeeEEE
Q 009242 168 GD------WFKTNHKILRQTLDSGKSLPFPDGVLINGQGH---TTFNGDQGKTYMFRISNVGLST-SFNFRIQGHTMKLV 237 (539)
Q Consensus 168 ~d------~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---~~l~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~vi 237 (539)
++ |+++........+.........+.++|||+.+ +.+++++|++|||||+|++... .+.|||+||.|+|+
T Consensus 201 ~~~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vv 280 (742)
T 2r7e_A 201 AVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVR 280 (742)
T ss_dssp ECCCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEET
T ss_pred ecccCCccccccccccccccCCCccccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEE
Confidence 64 44332211000011111122356789999986 4789999999999999999875 68999999999997
Q ss_pred EecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 238 EVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 238 a~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
+ ..+|++.|.||++++|+|+++ .||.|+++||..
T Consensus 281 g--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 281 N--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp T--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred e--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 4 347899999999999999999 699999999965
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2.1e-52 Score=425.44 Aligned_cols=264 Identities=22% Similarity=0.397 Sum_probs=224.0
Q ss_pred CeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-CC
Q 009242 28 PYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-NC 105 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~~ 105 (539)
.+++|+|++++..+++ +|+++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++...+++||+|++ ||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4789999999999987 599999999999999999999999999999999999999999999999888889999998 99
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcch--hhc-cceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhhh
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLM--HRA-AGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTL 182 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 182 (539)
+|.||++++|+|++ +++||||||||... |+. +||+|++||++++....+. ..++|++++++||+....... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKY---G 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCT---T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccccc---C
Confidence 99999999999997 57999999999874 787 9999999999865432211 347899999999987321110 0
Q ss_pred cCCCCCCCCceEEECCCCCce---EEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcccc-ceeeceEEEcCCc
Q 009242 183 DSGKSLPFPDGVLINGQGHTT---FNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-QNIYDSLDVHVGQ 258 (539)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~~---l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-p~~~d~l~l~pg~ 258 (539)
..+.....++.++|||+.++. +++++|++|||||+|+++. .++|||+||.|+||+.||.+++ |..+|++.|+|||
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~ 235 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred CCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCC
Confidence 111122246899999999874 8999999999999999965 7899999999999999999986 8889999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeeccc-----CccceEEEEEecCCC
Q 009242 259 SVSVLVTLNQPPKDYYIVASTRFTK-----NVLTATAILHYTNSH 298 (539)
Q Consensus 259 R~dv~v~~~~~~g~~~~~~~~~~~~-----~~~~~~ail~y~~~~ 298 (539)
|+||+|+++ +||.|+++|+..... ......++++|++..
T Consensus 236 r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 236 RYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999998 689999999965421 123346899998754
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.2e-50 Score=425.13 Aligned_cols=398 Identities=15% Similarity=0.118 Sum_probs=265.9
Q ss_pred CCCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCC
Q 009242 26 DDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNC 105 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~ 105 (539)
...++++++++++..+..+| .+.++||++ ||+|+|++||+|+|+|+|.+...+++||||.... .+|
T Consensus 25 ~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~~~ 90 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------SAI 90 (447)
T ss_dssp CCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------CCC
T ss_pred CCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------cce
Confidence 34556676676655555444 456899999 9999999999999999999987799999996311 169
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCC-----CCCCCceeEEeeeecccchH--HH
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPY-----PIQDGDFTLLIGDWFKTNHK--IL 178 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~-----~~~~~e~~l~l~d~~~~~~~--~~ 178 (539)
+|.||++++|.|++ .++||||||||...|..+||+|.|+|+++....... .....+++..+ |+...... .+
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 99999999999997 569999999999999999999999999865322110 00011111111 11000000 00
Q ss_pred Hh-hhcCCC-CCCCCceEEECCCC-CceEEEecCCEEEEEEEecCC-CCeeeEEEeCCeeEEEEecCccccceeeceEEE
Q 009242 179 RQ-TLDSGK-SLPFPDGVLINGQG-HTTFNGDQGKTYMFRISNVGL-STSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDV 254 (539)
Q Consensus 179 ~~-~~~~~~-~~~~~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l 254 (539)
.. ...... .....+.+++||+. .|.+++++|++|||||+|.+. ...+.+|+||. ++.||.+ +++.|
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i 238 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQT 238 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCB
T ss_pred EEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEe
Confidence 00 000000 11234689999996 679999999999999999986 34567888774 3578873 34469
Q ss_pred cCCceEEEEEEeCCCCcceEEEEeeecc-cC-ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCC
Q 009242 255 HVGQSVSVLVTLNQPPKDYYIVASTRFT-KN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 332 (539)
Q Consensus 255 ~pg~R~dv~v~~~~~~g~~~~~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~ 332 (539)
.||||+++.++++ .+|.||++|+.... .+ .....+.+.|.+.. ++|. .+.+..+. ..+ +.... .
T Consensus 239 ~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~-~~~--~~~~~--~ 304 (447)
T 2dv6_A 239 DPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ---VDREFYVM-QGE--IYTVK--S 304 (447)
T ss_dssp CTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC---CSEEEEEE-EEE--ECBSS--C
T ss_pred CCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC---CCeeEEEE-ecc--cccCC--c
Confidence 9999999999998 58999999985311 11 12234566665432 1221 11110000 000 00000 0
Q ss_pred CCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeE
Q 009242 333 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSV 412 (539)
Q Consensus 333 ~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 412 (539)
....+ . . .+.+... .......|.|||+.+... ....
T Consensus 305 -~~~~g-----~--~--~~~~~~~--~~~~~~~~~iNG~~~~~~--------------------------------~~~~ 340 (447)
T 2dv6_A 305 -FGTSG-----E--Q--EMDYEKL--INEKPEYFLFNGSVGSLT--------------------------------RSHP 340 (447)
T ss_dssp -TTCCE-----E--C--CBBHHHH--HTTCCSEEEETTSTTCCC--------------------------------CCCC
T ss_pred -ccccc-----c--c--cCChHHh--hccCCCEEEECCcccCCC--------------------------------CCcc
Confidence 00000 0 0 0000000 001124589999875321 0134
Q ss_pred EEecCCcEEEEEEEcCC-CCCCceeecCCceEEEeeccCcCCcccccccCCCCCC-cceEEEeCCCcEEEEEEEeCCcee
Q 009242 413 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 413 ~~~~~g~~ve~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
+.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+.|+|++++.|+|+++|||.
T Consensus 341 ~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG~ 410 (447)
T 2dv6_A 341 LYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAGR 410 (447)
T ss_dssp EEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCEE
T ss_pred eEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCEE
Confidence 67899999999999976 67899999999999999865421 2344 799999999999999999999999
Q ss_pred eEEEeechhhhhcccEEEEEEecCccc
Q 009242 491 WNMRSAIWERQYLGQQFYLKVWNAVHS 517 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~~~~~~ 517 (539)
|++|||+++|++.||++.++|.++..+
T Consensus 411 ~~~hch~~~h~~~Gm~~~~~v~~~~~~ 437 (447)
T 2dv6_A 411 YILVDHALSRLEHGLVGFLNVDGPKND 437 (447)
T ss_dssp EEEEESSGGGGGGTCCEEEEECSCSCC
T ss_pred EEEEecCcCccccCCEEEEEEeCCCCc
Confidence 999999999999999999999876543
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=9e-50 Score=404.04 Aligned_cols=264 Identities=22% Similarity=0.290 Sum_probs=221.0
Q ss_pred ccCCCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC--CCceeeeCCcCCCCCCCCCCC
Q 009242 24 KADDPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD--QPFLLTWNGIKQRKNSWQDGV 100 (539)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~ 100 (539)
.+.+++++|+|++++..+++ +|.++.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||.
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 45668899999999999987 899999999999999999999999999999999986 58999999984 37887
Q ss_pred cccCCccCCCCeEEEEEEeCCCccceeEccCc---chhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHH
Q 009242 101 LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPST---LMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKI 177 (539)
Q Consensus 101 ~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 177 (539)
+. ...|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++.. +..|+|++++++||+++....
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCccc
Confidence 65 2459999999999996 679999999997 47999999999999986432 234899999999999875210
Q ss_pred HHhhh--c-CCCCCCCCceEEECCCCCc-----eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceee
Q 009242 178 LRQTL--D-SGKSLPFPDGVLINGQGHT-----TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIY 249 (539)
Q Consensus 178 ~~~~~--~-~~~~~~~~~~~liNG~~~~-----~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~ 249 (539)
..... + .......++.++|||+.++ .+++++|++|||||+|+|+.+.+.|||+||.|+||+.||.+++|..+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~ 261 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENV 261 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSB
T ss_pred cccccccChhHhccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCce
Confidence 00000 0 0000124689999999985 59999999999999999988889999999999999999999999999
Q ss_pred ceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCC
Q 009242 250 DSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHS 299 (539)
Q Consensus 250 d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~ 299 (539)
|++.|+||||+||+|+++ .+|.|+++|+...........|+++|++...
T Consensus 262 d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 262 QSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp SEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred eEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 999999999999999999 5999999999764422344689999987653
No 24
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.6e-49 Score=392.71 Aligned_cols=245 Identities=15% Similarity=0.194 Sum_probs=195.4
Q ss_pred ccCCCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc
Q 009242 24 KADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT 103 (539)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 103 (539)
.+...+|.|+|+|++.. .+......+.|||++|||+||+++||+|+|+|+|.++++++|||||+++. ..+||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCc-C
Confidence 34667899999999853 24444566789999999999999999999999999999999999999875 4699999 6
Q ss_pred -CCccCCCCeEEEEEEeCC------------CccceeEccCcc------hhhccceeeEEEEecCCCCCCCCCCCCCcee
Q 009242 104 -NCPIPPNSNYTYKFQTKD------------QIGSYFYFPSTL------MHRAAGGYGGINIYQRPRIPIPYPIQDGDFT 164 (539)
Q Consensus 104 -~~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 164 (539)
||+|.||++++|+|++.+ ++||||||||.+ .|+.+||+|+|||+++... .. |+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~~---drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--LP---DATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--CC---SEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--cc---ccceE
Confidence 999999999999999853 379999999985 5899999999999986532 11 56666
Q ss_pred EEeeeecccchHHHHhhhcCCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc
Q 009242 165 LLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT 244 (539)
Q Consensus 165 l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 244 (539)
|++++|
T Consensus 152 l~l~~~-------------------------------------------------------------------------- 157 (276)
T 3kw8_A 152 IVFNDM-------------------------------------------------------------------------- 157 (276)
T ss_dssp EEEETT--------------------------------------------------------------------------
T ss_pred EEeccc--------------------------------------------------------------------------
Confidence 544210
Q ss_pred cceeeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccc
Q 009242 245 IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR 324 (539)
Q Consensus 245 ~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~ 324 (539)
T Consensus 158 -------------------------------------------------------------------------------- 157 (276)
T 3kw8_A 158 -------------------------------------------------------------------------------- 157 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCC
Q 009242 325 WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGG 404 (539)
Q Consensus 325 ~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~ 404 (539)
+|||+.|..
T Consensus 158 ------------------------------------------~iNG~~~~~----------------------------- 166 (276)
T 3kw8_A 158 ------------------------------------------TINNRKPHT----------------------------- 166 (276)
T ss_dssp ------------------------------------------EETTCCTTC-----------------------------
T ss_pred ------------------------------------------ccceecccC-----------------------------
Confidence 011111100
Q ss_pred CCCcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEE
Q 009242 405 ASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS 484 (539)
Q Consensus 405 ~~~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ 484 (539)
...+.++.|++|+|++.|.+.+.|||||||+.|++++.| .++.. ...+.++||+.|+|+++..++|+
T Consensus 167 -----~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G--~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 167 -----GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG--ILTGP------DDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp -----CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSS--SCCST------TCCCCEESEEEECTTCEEEEEEE
T ss_pred -----CCCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccC--ccCCC------cccccCCccEEeCCCceEEEEEE
Confidence 011456778899999999988899999999999997643 22211 12346899999999999999999
Q ss_pred eC---CceeeEEEeechhhhhcccEEEEEEecCcc
Q 009242 485 LD---NQGMWNMRSAIWERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 485 ad---npG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (539)
++ |||.|+||||+++|++.|||..|+|.++++
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 97 899999999999999999999999998865
No 25
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=9.9e-49 Score=389.40 Aligned_cols=232 Identities=20% Similarity=0.300 Sum_probs=205.8
Q ss_pred CCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-C
Q 009242 27 DPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-N 104 (539)
Q Consensus 27 ~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~ 104 (539)
..+++|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||++ ..++||+|++ |
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccc
Confidence 34789999999998876 49999999999999999999999999999999999999999999996 3679999998 9
Q ss_pred CccCCCCeEEEEEEeCCCccceeEccCcc---hhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhh
Q 009242 105 CPIPPNSNYTYKFQTKDQIGSYFYFPSTL---MHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQT 181 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~ 181 (539)
++|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ + .++|++|+++||+.+.
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~-~---~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-P---ADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC-C---CSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC-C---CcceEEEEEeeEecCC-------
Confidence 999999999999997 7899999999997 68999999999999875432 2 3799999999998751
Q ss_pred hcCCCCCCCCceEEECCCCCc----eEEEecCCEEEEEEEecCCCC-eeeEEEeCCeeEEEEecCccccceeeceEEEcC
Q 009242 182 LDSGKSLPFPDGVLINGQGHT----TFNGDQGKTYMFRISNVGLST-SFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHV 256 (539)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~----~l~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~p 256 (539)
+ ..++.++|||+.++ .++++.|++|||||+|++... .++|||+||.|+|++.++....|...|++.|.|
T Consensus 177 ---g---~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 177 ---G---DDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQ 250 (288)
T ss_dssp ---T---TCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEET
T ss_pred ---C---CCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCC
Confidence 1 24579999999985 699999999999999999654 689999999999998444334578899999999
Q ss_pred CceEEEEEEeCCCCcceEEEEeee
Q 009242 257 GQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 257 g~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
|||++|+++++ .||.|.++||..
T Consensus 251 g~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 251 GQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp TCEEEEEECCC-SCEEEEEECSSH
T ss_pred CceEEEEEECC-CCEEEEEEecCh
Confidence 99999999999 799999999854
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.7e-46 Score=393.27 Aligned_cols=265 Identities=20% Similarity=0.241 Sum_probs=222.0
Q ss_pred cccCCCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC--CCceeeeCCcCCCCCCCCCC
Q 009242 23 VKADDPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD--QPFLLTWNGIKQRKNSWQDG 99 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG 99 (539)
..+.+++++|+|++++..+.+ ||..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 456678999999999999984 899999999999999999999999999999999985 599999999853 688
Q ss_pred CcccCCccCCCCeEEEEEEeCCCccceeEccCc---chhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchH
Q 009242 100 VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPST---LMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHK 176 (539)
Q Consensus 100 ~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~ 176 (539)
.+.. .+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ ..|+|++|+++||+++...
T Consensus 97 ~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~----~~d~e~~l~l~d~~~~~~~ 170 (442)
T 2zoo_A 97 GAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA----PVDREYYLVQGDFYTKGEF 170 (442)
T ss_dssp GGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC----CCSEEEEEEEEEECBSSCT
T ss_pred CCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC----CCCceEEEEeeeeeccCcc
Confidence 7653 469999999999996 679999999975 489999999999999865322 3389999999999987531
Q ss_pred H-HHh-hhc-CCCCCCCCceEEECCCCC-----ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcccccee
Q 009242 177 I-LRQ-TLD-SGKSLPFPDGVLINGQGH-----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNI 248 (539)
Q Consensus 177 ~-~~~-~~~-~~~~~~~~~~~liNG~~~-----~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~ 248 (539)
. ... ..+ .......+++++|||+.+ +.+++++|++|||||+|+|....+.|||+||+|+||+.||.+++|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~ 250 (442)
T 2zoo_A 171 GEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHN 250 (442)
T ss_dssp TCCEEECBCHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECS
T ss_pred cccccccCChhHhccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCcc
Confidence 0 000 000 000124578999999987 47999999999999999998888999999999999999999999999
Q ss_pred eceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCC
Q 009242 249 YDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHS 299 (539)
Q Consensus 249 ~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~ 299 (539)
++++.|.||||+||+|+++ .+|.|+++|+...........++++|.+...
T Consensus 251 ~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 251 VQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp BSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred ceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999999999 6899999998654322345688999987654
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=9.6e-46 Score=376.22 Aligned_cols=267 Identities=17% Similarity=0.186 Sum_probs=208.8
Q ss_pred cccCCCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc
Q 009242 23 VKADDPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL 101 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~ 101 (539)
..+.+.+++|+|++++..+++ +|+++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 455668999999999999886 6999999999999999999999999999999999 578999999876544445544
Q ss_pred ccCCccCCCCeEEEEEEeCCCccceeEccCcc-----hhhccceeeEEEEecCCCCC----CCCCCCCCceeEEeeeecc
Q 009242 102 GTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-----MHRAAGGYGGINIYQRPRIP----IPYPIQDGDFTLLIGDWFK 172 (539)
Q Consensus 102 ~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-----~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~ 172 (539)
.+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .++ ..|+|++|+++||++
T Consensus 103 ~~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 103 GL-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYI 179 (333)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred ce-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeecc
Confidence 44 349999999999997 6799999999987 69999999999999764321 122 338999999999998
Q ss_pred cc--hHHHHhh----------hcCCCCCCCCceEEECCCCC-----ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeE
Q 009242 173 TN--HKILRQT----------LDSGKSLPFPDGVLINGQGH-----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMK 235 (539)
Q Consensus 173 ~~--~~~~~~~----------~~~~~~~~~~~~~liNG~~~-----~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~ 235 (539)
.. ++.+..+ +.. .....++.++|||+.+ +.++|++|++||||++|++....+ ..+++|.++
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~ 257 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDL 257 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEE
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeE
Confidence 32 2111100 000 0124578999999984 469999999988877766543322 347899999
Q ss_pred EEEecCccccc-e-eeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCC
Q 009242 236 LVEVEGSHTIQ-N-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHS 299 (539)
Q Consensus 236 via~DG~~~~p-~-~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~ 299 (539)
|++ ||.++++ . .+|++.|.||||+||+|+++ .+|+|+++||...........++++|.+...
T Consensus 258 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 258 VWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999 9999874 3 48999999999999999999 5899999999764321234567899987543
No 28
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.4e-45 Score=372.99 Aligned_cols=252 Identities=16% Similarity=0.190 Sum_probs=193.7
Q ss_pred CCCeEEEEEEEEEEeecCCCeeeE-EEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccC
Q 009242 26 DDPYRFYTWTVTSGTLSPLGVPQE-VILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTN 104 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~G~~~~-~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 104 (539)
..++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++..|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 45679999999975 3443211 1234899999999999999999999999999999999999775 6799999339
Q ss_pred CccCCCCeEEEEEEeCC------------CccceeEccCc------chhhccceeeEEEEecCCCCCCCCCCCCCceeEE
Q 009242 105 CPIPPNSNYTYKFQTKD------------QIGSYFYFPST------LMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLL 166 (539)
Q Consensus 105 ~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~------~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 166 (539)
|+|.||++++|+|++.+ ++|+||||||. ..|+.+||+|++||+++... . .|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEE
Confidence 99999999999999732 35999999996 26899999999999986432 2 26677766
Q ss_pred eeeecccchHHHHhhhcCCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccc
Q 009242 167 IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ 246 (539)
Q Consensus 167 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p 246 (539)
++|| +|||+.
T Consensus 195 ~~d~------------------------~iNG~~---------------------------------------------- 204 (343)
T 3cg8_A 195 FNDM------------------------TINNRK---------------------------------------------- 204 (343)
T ss_dssp EETT------------------------EETTCC----------------------------------------------
T ss_pred cccc------------------------eecccC----------------------------------------------
Confidence 6543 445543
Q ss_pred eeeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccc
Q 009242 247 NIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWN 326 (539)
Q Consensus 247 ~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~ 326 (539)
.+.
T Consensus 205 ----------------------------------------------------------~~~------------------- 207 (343)
T 3cg8_A 205 ----------------------------------------------------------PHT------------------- 207 (343)
T ss_dssp ----------------------------------------------------------TTC-------------------
T ss_pred ----------------------------------------------------------CCC-------------------
Confidence 000
Q ss_pred cccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCC
Q 009242 327 LTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGAS 406 (539)
Q Consensus 327 l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~ 406 (539)
T Consensus 208 -------------------------------------------------------------------------------- 207 (343)
T 3cg8_A 208 -------------------------------------------------------------------------------- 207 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEe-
Q 009242 407 SVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL- 485 (539)
Q Consensus 407 ~~~~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a- 485 (539)
...+.++.|++|+|+|.|.+.+.|||||||+.|+|+.. |.+.. ....+.|+||+.|+|++++.|+|++
T Consensus 208 ---~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~ 276 (343)
T 3cg8_A 208 ---GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAG 276 (343)
T ss_dssp ---CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETT
T ss_pred ---CccEEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEEC
Confidence 00134577888999999998899999999999999743 22211 1123578999999999999999996
Q ss_pred --CCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCccccc
Q 009242 486 --DNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVC 531 (539)
Q Consensus 486 --dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 531 (539)
+|||.|+||||+++|++.|||..|.|.+++. .+|.-++.|
T Consensus 277 ~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~------~~P~y~~~~ 318 (343)
T 3cg8_A 277 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG------TIPGYEPHE 318 (343)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS------CCSCC----
T ss_pred CCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC------CCCCCCCCC
Confidence 7999999999999999999999999987643 345555554
No 29
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.9e-46 Score=430.19 Aligned_cols=385 Identities=13% Similarity=0.158 Sum_probs=259.1
Q ss_pred eeeEEEEECCCCCC--ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCC-CCCCCCCcccCCccCCCCeEEEEEEeCCC
Q 009242 46 VPQEVILINGQFPG--PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRK-NSWQDGVLGTNCPIPPNSNYTYKFQTKDQ 122 (539)
Q Consensus 46 ~~~~~~~~nG~~pg--P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~~~~i~pG~~~~y~~~~~~~ 122 (539)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+.|+|.||.+++|+|++ ++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~ 691 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DT 691 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CC
Confidence 56789999999999 889999999999999976 4459999999988 89999998767999999999999996 68
Q ss_pred ccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCceeEEe----eeecccchHHHHhhh--cCCC----------
Q 009242 123 IGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLI----GDWFKTNHKILRQTL--DSGK---------- 186 (539)
Q Consensus 123 ~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~--~~~~---------- 186 (539)
+||||||||...|..+||+|.++|++......+....+.|.++.+ .||++.....+...+ ..+.
T Consensus 692 ~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~~ 771 (1065)
T 2j5w_A 692 EGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDKG 771 (1065)
T ss_dssp CEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCCT
T ss_pred CeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecCC
Confidence 999999999999999999999999886443333234478889999 899997654332110 0000
Q ss_pred CCCCCc------eEEEC-----------------CCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcc
Q 009242 187 SLPFPD------GVLIN-----------------GQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSH 243 (539)
Q Consensus 187 ~~~~~~------~~liN-----------------G~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~ 243 (539)
....+. ++.+. +...|.|++++|+++++|+.|.... .+.+|.||.. +... |
T Consensus 772 ~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~-~~sih~HGl~--~~~~-~-- 845 (1065)
T 2j5w_A 772 EFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR-PYSIHAHGVQ--TESS-T-- 845 (1065)
T ss_dssp TTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS-CBCCEESSCB--CSCS-C--
T ss_pred CccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC-CceEeecccc--ccCC-C--
Confidence 000000 11111 1223589999999999999999764 4577777643 3222 1
Q ss_pred ccceeeceEEEcCCceEEEEEEeCCC---------CcceEEEEeeecccCc-cceEEEEEecCCCCCCCCCCCCCCCccc
Q 009242 244 TIQNIYDSLDVHVGQSVSVLVTLNQP---------PKDYYIVASTRFTKNV-LTATAILHYTNSHSPASGPLPTGPTYEI 313 (539)
Q Consensus 244 ~~p~~~d~l~l~pg~R~dv~v~~~~~---------~g~~~~~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~ 313 (539)
...+.||+++...+...+. +|.||++++.....+. ....+.|.+....... +..+..+.
T Consensus 846 -------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~----~~~~~~d~ 914 (1065)
T 2j5w_A 846 -------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK----VFNPRRKL 914 (1065)
T ss_dssp -------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC---------CCCCEE
T ss_pred -------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc----ccCCCcce
Confidence 1256799998888876532 2689999885421111 1112233333221100 00111122
Q ss_pred cccccc--c-ccccccc----ccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhccccc
Q 009242 314 HWSMKQ--A-RTFRWNL----TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYF 386 (539)
Q Consensus 314 ~~~~~~--~-~~l~~~l----~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~ 386 (539)
+..+.. . ....+-+ .... +.|.. ...... .+. .....|.|||+.|..
T Consensus 915 D~~l~~~~~d~~~~~y~~~n~~~~~--~~P~~------v~~~~~---~~~----~~~~~~~iNG~~~~~----------- 968 (1065)
T 2j5w_A 915 EFALLFLVFDENESWYLDDNIKTYS--DHPEK------VNKDDE---EFI----ESNKMHAINGRMFGN----------- 968 (1065)
T ss_dssp EEEEEEEEEEGGGSTTHHHHHHHHC--SCGGG------CCTTCH---HHH----HHTEEEEETTBCTTC-----------
T ss_pred EEEEEEEeecCCcceeeccCccccc--CCccc------cCcchh---hhh----ccCceEEECCccCCC-----------
Confidence 111000 0 0000000 0000 00100 000000 000 011348899987632
Q ss_pred CCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEEEcCC--CCCCceeecCCceEEEeeccCcCCcccccccCCCC
Q 009242 387 NIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLAD 464 (539)
Q Consensus 387 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~ 464 (539)
+..+.++.|++|+|+|.|.+ .+.|||||||+.|+|++++
T Consensus 969 -----------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~---------------- 1009 (1065)
T 2j5w_A 969 -----------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG---------------- 1009 (1065)
T ss_dssp -----------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------
T ss_pred -----------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------
Confidence 12356899999999999975 6789999999999999763
Q ss_pred CCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEecCcc
Q 009242 465 TLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 465 p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (539)
|.|||||.|+|+++++|+|+|||||.|+||||+++|++.|||..|+|.+.+.
T Consensus 1010 p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 5789999999999999999999999999999999999999999999987654
No 30
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=3.9e-45 Score=372.95 Aligned_cols=267 Identities=18% Similarity=0.210 Sum_probs=206.1
Q ss_pred cccCCCeEEEEEEEEEEeec--CCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCC
Q 009242 23 VKADDPYRFYTWTVTSGTLS--PLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV 100 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~--~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~ 100 (539)
..+.+++++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 32 AKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp CSSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGG
T ss_pred ccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCC
Confidence 35567899999999999877 459999999999999999999999999999999998 6789999987654434443
Q ss_pred cccCCccCCCCeEEEEEEeCCCccceeEccCcc----hhhccceeeEEEEecCCCCC----CCCCCCCCceeEEeeeecc
Q 009242 101 LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL----MHRAAGGYGGINIYQRPRIP----IPYPIQDGDFTLLIGDWFK 172 (539)
Q Consensus 101 ~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~ 172 (539)
..+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .+. ..|+|++|+++||++
T Consensus 109 ~~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 109 GAL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred ccc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 333 359999999999997 5799999999986 69999999999999864211 121 238899999999998
Q ss_pred c--chHHHHhh----------hcCCCCCCCCceEEECCCCC-----ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeE
Q 009242 173 T--NHKILRQT----------LDSGKSLPFPDGVLINGQGH-----TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMK 235 (539)
Q Consensus 173 ~--~~~~~~~~----------~~~~~~~~~~~~~liNG~~~-----~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~ 235 (539)
. .++.+..+ .+. .....++.++|||+.+ +.+++++|+++||+++|.+.... ..++++|.|+
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~gh~~~ 263 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTR-PHLIGGHGDY 263 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBC-EEEETCCEEE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccc-eEEecCcceE
Confidence 3 22211100 000 0123568999999996 78999999988877666544322 3458899999
Q ss_pred EEEecCccccce--eeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCC
Q 009242 236 LVEVEGSHTIQN--IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHS 299 (539)
Q Consensus 236 via~DG~~~~p~--~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~ 299 (539)
|++ ||.++.+. .+|++.|.||||+||+|+++ .||.|+++||...........++++|.+...
T Consensus 264 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 264 VWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 997 99987643 48999999999999999999 5899999999763221233457889987553
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=6.8e-45 Score=370.58 Aligned_cols=265 Identities=17% Similarity=0.219 Sum_probs=204.3
Q ss_pred cCCCeEEEEEEEEEEeec--CCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc
Q 009242 25 ADDPYRFYTWTVTSGTLS--PLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG 102 (539)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~--~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 102 (539)
+.+++++|+|++++..+. +||.++.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+....||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 456789999999998865 5699999999999999999999999999999999973 35555555554445666555
Q ss_pred cCCccCCCCeEEEEEEeCCCccceeEccCcc----hhhccceeeEEEEecCCCCC----CCCCCCCCceeEEeeeecccc
Q 009242 103 TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL----MHRAAGGYGGINIYQRPRIP----IPYPIQDGDFTLLIGDWFKTN 174 (539)
Q Consensus 103 ~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~ 174 (539)
+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .+. ..|+|++|+++||++..
T Consensus 105 ~-~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 L-TNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCB
T ss_pred e-EEeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeecc
Confidence 4 249999999999997 6799999999985 69999999999999865321 122 34889999999999852
Q ss_pred h--HHHHhhhcCC---------CCCCCCceEEECCCCC-----ceEEEecCCEEEEEEEecCCCCeeeEE-EeCCeeEEE
Q 009242 175 H--KILRQTLDSG---------KSLPFPDGVLINGQGH-----TTFNGDQGKTYMFRISNVGLSTSFNFR-IQGHTMKLV 237 (539)
Q Consensus 175 ~--~~~~~~~~~~---------~~~~~~~~~liNG~~~-----~~l~v~~G~~~rlRliN~~~~~~~~~~-l~gh~~~vi 237 (539)
+ +.+..+...+ .....++.++|||+.+ +.++|++|++||| +|++..+.+.++ ++||.|+|+
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi 259 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVW 259 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEE
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEe
Confidence 2 1111110000 0124578999999995 6899999997765 566655555555 599999999
Q ss_pred EecCccccce--eeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCC
Q 009242 238 EVEGSHTIQN--IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHS 299 (539)
Q Consensus 238 a~DG~~~~p~--~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~ 299 (539)
+ ||.+++|. .+|++.|+||||+||+|+++ .+|.|+++|+...........++++|++...
T Consensus 260 ~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 260 E-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp T-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred C-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 7 99998764 36899999999999999999 5999999999754322344578999987654
No 32
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=6e-45 Score=366.21 Aligned_cols=238 Identities=15% Similarity=0.197 Sum_probs=194.2
Q ss_pred cccCCCeEEEEEEEEEEeecCCCe-eeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc
Q 009242 23 VKADDPYRFYTWTVTSGTLSPLGV-PQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL 101 (539)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~G~-~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~ 101 (539)
+.+...+|+++|.+++. ++|. ...++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 44566789999987643 5663 3456777999999999999999999999999999999999999774 5699999
Q ss_pred ccCCccCCCCeEEEEEEeC------------CCccceeEccCcc------hhhccceeeEEEEecCCCCCCCCCCCCCce
Q 009242 102 GTNCPIPPNSNYTYKFQTK------------DQIGSYFYFPSTL------MHRAAGGYGGINIYQRPRIPIPYPIQDGDF 163 (539)
Q Consensus 102 ~~~~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 163 (539)
..||+|.||++|+|+|++. .++||||||||.. .|+.+||+|+|||+++.. ..+ |+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~~~---d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--VLP---DRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--BCC---SEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--ccc---cccc
Confidence 6699999999999999852 3689999999975 357899999999998653 233 8999
Q ss_pred eEEeeeecccchHHHHhhhcCCCCCCCCceEEECCCCC---ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEec
Q 009242 164 TLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGH---TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVE 240 (539)
Q Consensus 164 ~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~D 240 (539)
+|+++||+. ||+.. +.++++.|++|||||+|+++. .++|||+||.|++++.|
T Consensus 157 ~l~~~d~t~------------------------Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHGh~F~v~~~~ 211 (313)
T 3tas_A 157 TIVFNDMTI------------------------NNRPAHTGPDFEATVGDRVEFVMITHGEY-YHTFHLHGHRWADNRTG 211 (313)
T ss_dssp EEEEETTEE------------------------TTCCTTCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSTTS
T ss_pred eeeccchhc------------------------ccCCcccccccccccCCEEEEEEeccccc-ceeeeecCCeeEEEEEC
Confidence 999998854 44433 368999999999999999975 67999999999999999
Q ss_pred Cccc---cceeeceEEEcCCceEEEEEEeCC--CCcceEEEEeeecccCccceEEEEEecC
Q 009242 241 GSHT---IQNIYDSLDVHVGQSVSVLVTLNQ--PPKDYYIVASTRFTKNVLTATAILHYTN 296 (539)
Q Consensus 241 G~~~---~p~~~d~l~l~pg~R~dv~v~~~~--~~g~~~~~~~~~~~~~~~~~~ail~y~~ 296 (539)
|... .+..+|++.|.||||++++|.+.+ +||.|.++||...-. ...-.+++.++.
T Consensus 212 ~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~-~~GM~~~f~V~~ 271 (313)
T 3tas_A 212 MLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS-DMGMVGLFLVKK 271 (313)
T ss_dssp SCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-HTTCEEEEEEEC
T ss_pred CccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH-HCCCeEEEEEEC
Confidence 8875 367899999999999999998764 589999999964221 122234555554
No 33
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2.8e-44 Score=358.60 Aligned_cols=224 Identities=19% Similarity=0.286 Sum_probs=185.3
Q ss_pred hcccCCCeEEEEEEEEEEeecCCC-eeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCC
Q 009242 22 LVKADDPYRFYTWTVTSGTLSPLG-VPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV 100 (539)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~G-~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~ 100 (539)
-.++.+.+|+++|.+++.. ++ ....++.+||++|||+|||++||+|+|+|+|+|++++||||||+++ ++.+||+
T Consensus 22 p~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~--~~~~DG~ 96 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDY--DVNSDGT 96 (299)
T ss_dssp -----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBC--CGGGSCC
T ss_pred CcccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCccc--CCccCCC
Confidence 3556778999999999764 33 2344556699999999999999999999999999999999999976 4679999
Q ss_pred cccCCccCCCCeEEEEEEeC------------CCccceeEccCcc------hhhccceeeEEEEecCCCCCCCCCCCCCc
Q 009242 101 LGTNCPIPPNSNYTYKFQTK------------DQIGSYFYFPSTL------MHRAAGGYGGINIYQRPRIPIPYPIQDGD 162 (539)
Q Consensus 101 ~~~~~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e 162 (539)
+..||+|.||++|+|+|+++ .++||||||||.+ .|+.+||+|+|||+++.. ..+ |+|
T Consensus 97 ~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~~~---d~e 171 (299)
T 3t9w_A 97 LMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--LLP---KRQ 171 (299)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--CCC---SEE
T ss_pred ccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--cCc---ccc
Confidence 85599999999999999974 2589999999975 478899999999998643 233 899
Q ss_pred eeEEeeeecccchHHHHhhhcCCCCCCCCceEEECCCCC---ceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEe
Q 009242 163 FTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGH---TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEV 239 (539)
Q Consensus 163 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~ 239 (539)
+++++++|. +||+.+ +.++++.|++|||||+|++.. .++|||+||.|+++..
T Consensus 172 ~~l~~~~~~------------------------~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~ 226 (299)
T 3t9w_A 172 FTVVFNDMM------------------------INNRAHHDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRT 226 (299)
T ss_dssp EEEEEETTE------------------------ETTCCTTCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSS
T ss_pred ceeeeeeee------------------------ecCccccccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEec
Confidence 999987764 566655 378999999999999999985 5699999999999998
Q ss_pred cCcccc---ceeeceEEEcCCceEEEEEEeCC--CCcceEEEEeee
Q 009242 240 EGSHTI---QNIYDSLDVHVGQSVSVLVTLNQ--PPKDYYIVASTR 280 (539)
Q Consensus 240 DG~~~~---p~~~d~l~l~pg~R~dv~v~~~~--~~g~~~~~~~~~ 280 (539)
|+.... +..+|++.|.||||++++|.+.+ +||.|+++||..
T Consensus 227 g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 227 GMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp SSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred ccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 887754 34689999999999999987653 589999999965
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=5.6e-41 Score=369.94 Aligned_cols=247 Identities=16% Similarity=0.203 Sum_probs=185.5
Q ss_pred CCCeEEEEEEEEEEee--cCCC------------eeeE--EEEE----------------CCCCCCceEEEEcCCEEEEE
Q 009242 26 DDPYRFYTWTVTSGTL--SPLG------------VPQE--VILI----------------NGQFPGPRLDVVTNDNIILN 73 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~--~~~G------------~~~~--~~~~----------------nG~~pgP~i~v~~Gd~v~i~ 73 (539)
...+|+|.+.|+|..+ ++.| +.++ ...| ++++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4678999999999775 3322 2222 2344 34789999999999999999
Q ss_pred EEECCCCCceeeeCCcCCCCCCCCCCCccc---------CCccCCCCeEEEEEEeCCC-----cc----ceeEccCcc--
Q 009242 74 VINKLDQPFLLTWNGIKQRKNSWQDGVLGT---------NCPIPPNSNYTYKFQTKDQ-----IG----SYFYFPSTL-- 133 (539)
Q Consensus 74 ~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~---------~~~i~pG~~~~y~~~~~~~-----~G----t~wYH~H~~-- 133 (539)
|+|.|+++++|||||+++. +.+||+|++ ||+|.||++|+|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999874 679999853 7999999999999998654 47 999999996
Q ss_pred hhhccceeeEEEEecCCCCCC--CCCCCCCceeEEee------eecccchHHHHhhhcCCCCCCCCceEEECCCCC--ce
Q 009242 134 MHRAAGGYGGINIYQRPRIPI--PYPIQDGDFTLLIG------DWFKTNHKILRQTLDSGKSLPFPDGVLINGQGH--TT 203 (539)
Q Consensus 134 ~~~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~--~~ 203 (539)
.|+.+||+|+|||+++..... ..+..++|++|+++ ||+++.................++.++|||+.+ +.
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~ 240 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPG 240 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSCCCC
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEecCCCC
Confidence 789999999999998753211 11234689999999 666654332110000011123468999999986 78
Q ss_pred EEEecCCEEEEEEEecCCCC-eeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 204 FNGDQGKTYMFRISNVGLST-SFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 204 l~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
+++++|++|||||+|+++.. .+.||+|||.|++++.|| ..+|++.|.||||+||+|+++ .||.|+++||..
T Consensus 241 l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~w~~hch~~ 312 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVG 312 (647)
T ss_dssp CEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEEEEEECCCH
T ss_pred eEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceEeecccCcc
Confidence 99999999999999999864 789999999999999886 478999999999999999999 589999999964
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=7.4e-40 Score=346.57 Aligned_cols=255 Identities=18% Similarity=0.196 Sum_probs=210.7
Q ss_pred CCCeEEEEEEEEEEeecC-CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC--CCceeeeCCcCCCCCCCCCCCcc
Q 009242 26 DDPYRFYTWTVTSGTLSP-LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD--QPFLLTWNGIKQRKNSWQDGVLG 102 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~~ 102 (539)
.+.++.|+|++++....+ +|....+|+|||++|||+|++++||+++|||.|.++ ..++|||||+. .+||+|.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCc
Confidence 346678899888777665 688899999999999999999999999999999985 57899999984 3799876
Q ss_pred cCCccCCCCeEEEEEEeCCCccceeEccCcc---hhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHH--
Q 009242 103 TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL---MHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKI-- 177 (539)
Q Consensus 103 ~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~-- 177 (539)
. ..|.||++++|.|++ +++||||||||.+ .|+.+||+|+|+|+++...+ ..++|++++++||++.....
T Consensus 235 ~-~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P----~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 235 F-TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP----QVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp G-CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSC----CCSEEEEEEEEEECBSSCTTCC
T ss_pred c-EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCC----CCCeeEEEEecccccCCccccc
Confidence 4 239999999999996 5799999999974 78899999999999864222 34889999999998753210
Q ss_pred ------HHhhhcCCCCCCCCceEEECCCCCc-----eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccc
Q 009242 178 ------LRQTLDSGKSLPFPDGVLINGQGHT-----TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ 246 (539)
Q Consensus 178 ------~~~~~~~~~~~~~~~~~liNG~~~~-----~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p 246 (539)
..... ...++.++|||+.++ .+++++|++|||||+|++....++|||+||.|+||+.||.+++|
T Consensus 309 g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~ 383 (447)
T 2dv6_A 309 GEQEMDYEKLI-----NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSP 383 (447)
T ss_dssp EECCBBHHHHH-----TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSC
T ss_pred ccccCChHHhh-----ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCC
Confidence 11111 124678999999985 69999999999999999987889999999999999999999875
Q ss_pred e--eeceEEEcCCceEEEEEEeCCCCcceEEEEeeecccCccceEEEEEecCCC
Q 009242 247 N--IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSH 298 (539)
Q Consensus 247 ~--~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~ 298 (539)
. .+|++.|.||||++|+|+++ +||.|+++|+..... .....++++|++..
T Consensus 384 p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~-~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 384 PLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRL-EHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGG-GGTCCEEEEECSCS
T ss_pred CcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcc-ccCCEEEEEEeCCC
Confidence 5 58999999999999999999 699999999976432 23347889998654
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.2e-42 Score=348.50 Aligned_cols=208 Identities=13% Similarity=0.205 Sum_probs=157.4
Q ss_pred EEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc------c---CCccCCCCeEEEEEEeC
Q 009242 50 VILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG------T---NCPIPPNSNYTYKFQTK 120 (539)
Q Consensus 50 ~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~---~~~i~pG~~~~y~~~~~ 120 (539)
..++| ++|||+|+|++||+|+|+|+|.++++++|||||+++. ..+||++. + ||+|.||++|+|+|+++
T Consensus 51 ~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 35578 5899999999999999999999999999999999842 34555543 2 69999999999999985
Q ss_pred CC---------ccceeEccCcch--hhccceeeEEEEecCCC---CCCCCCCCCCceeEEeeeecccchHHHHhhhcCCC
Q 009242 121 DQ---------IGSYFYFPSTLM--HRAAGGYGGINIYQRPR---IPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGK 186 (539)
Q Consensus 121 ~~---------~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~---~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~ 186 (539)
++ +||||||||... |+.+||+|+|||+++.. +..+. ..|+|++|+++||....+ .
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~-- 196 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------W-- 196 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------S--
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------c--
Confidence 43 379999999874 88999999999998642 11121 347899999999843210 0
Q ss_pred CCCCCceEEECCCCC---ceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEE
Q 009242 187 SLPFPDGVLINGQGH---TTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSV 262 (539)
Q Consensus 187 ~~~~~~~~liNG~~~---~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv 262 (539)
....++.++|||+.+ +.+++++|+++||||+|++.. ..+.||++||.|++ || ..+|++.|.||||+||
T Consensus 197 ~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v 268 (306)
T 1sdd_A 197 NQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTA 268 (306)
T ss_dssp SCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC-
T ss_pred ccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEE
Confidence 012357899999997 689999999999999999987 57789999999975 77 3589999999999999
Q ss_pred EEEeCCCCcceEEEEeee
Q 009242 263 LVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 263 ~v~~~~~~g~~~~~~~~~ 280 (539)
+|+++ .+|.|+++|+..
T Consensus 269 ~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 269 NMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp --------CCCCCBCCST
T ss_pred EEEcC-CCeEEEEEeCCh
Confidence 99998 699999999954
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=5.8e-41 Score=371.92 Aligned_cols=246 Identities=13% Similarity=0.142 Sum_probs=195.2
Q ss_pred CCCeEEEEEEEEEEee--cCCCe----------------e-eEEEEE-----CC-----------CCCCceEEEEcCCEE
Q 009242 26 DDPYRFYTWTVTSGTL--SPLGV----------------P-QEVILI-----NG-----------QFPGPRLDVVTNDNI 70 (539)
Q Consensus 26 ~~~~~~~~l~~~~~~~--~~~G~----------------~-~~~~~~-----nG-----------~~pgP~i~v~~Gd~v 70 (539)
...+|+|.|.|++... +|+|. . ...+.| ++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4578999999999874 56653 1 222333 33 589999999999999
Q ss_pred EEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCC---------CccceeEccCcch--hhccc
Q 009242 71 ILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKD---------QIGSYFYFPSTLM--HRAAG 139 (539)
Q Consensus 71 ~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~--~~~~G 139 (539)
+|+|+|.++++++|||||+++..... ||+++.||+|.||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999876653 699877999999999999999864 7999999999984 89999
Q ss_pred eeeEEEEecCCCCCC--CCCCCCCceeEEeee------ecccchHHHHhhhcCCC--------CCCCCceEEECCCCC--
Q 009242 140 GYGGINIYQRPRIPI--PYPIQDGDFTLLIGD------WFKTNHKILRQTLDSGK--------SLPFPDGVLINGQGH-- 201 (539)
Q Consensus 140 l~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~--------~~~~~~~~liNG~~~-- 201 (539)
|+|+|||+++..... .....++|++|++++ |+++.. +..++.... .....+.++|||+.+
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~~ 366 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIMDT 366 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTTT
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccCCC
Confidence 999999998753221 112347899988754 444322 111111000 011245689999987
Q ss_pred -ceEEEecCCEEEEEEEecCCCC-eeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEee
Q 009242 202 -TTFNGDQGKTYMFRISNVGLST-SFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST 279 (539)
Q Consensus 202 -~~l~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~ 279 (539)
+.+++++|++|||||+|++... .++||||||.|+|++.||. .+|++.|.||||++|+|+++ .||.|+++||.
T Consensus 367 ~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~ 440 (770)
T 2r7e_B 367 LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVECLI 440 (770)
T ss_dssp CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCCCS
T ss_pred CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEecc
Confidence 4789999999999999998753 7899999999999999974 78999999999999999999 69999999996
Q ss_pred e
Q 009242 280 R 280 (539)
Q Consensus 280 ~ 280 (539)
.
T Consensus 441 ~ 441 (770)
T 2r7e_B 441 G 441 (770)
T ss_dssp H
T ss_pred c
Confidence 5
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.5e-37 Score=340.35 Aligned_cols=213 Identities=18% Similarity=0.212 Sum_probs=168.0
Q ss_pred CCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCC-----CCccc-CCccCCCCeEEEEEEeCCCcc-----
Q 009242 56 QFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQD-----GVLGT-NCPIPPNSNYTYKFQTKDQIG----- 124 (539)
Q Consensus 56 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~~-~~~i~pG~~~~y~~~~~~~~G----- 124 (539)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+++| |++.+ ||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 45565 45666 899999999999999866554
Q ss_pred ----ceeEccCcc--hhhccceeeEEEEecCCCC-CCC-CCCCCCceeEEeeee------cccchHHHHhhhcCC--CCC
Q 009242 125 ----SYFYFPSTL--MHRAAGGYGGINIYQRPRI-PIP-YPIQDGDFTLLIGDW------FKTNHKILRQTLDSG--KSL 188 (539)
Q Consensus 125 ----t~wYH~H~~--~~~~~Gl~G~liV~~~~~~-~~~-~~~~~~e~~l~l~d~------~~~~~~~~~~~~~~~--~~~ 188 (539)
|||||||.+ .|+.+||+|+|||+++... +.. ....|+|++|++++| +++. .+..+.... ...
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999998 4789999999999986421 111 114489999999754 4321 122221100 000
Q ss_pred ------CCCceEEECCCCCc--eEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCce
Q 009242 189 ------PFPDGVLINGQGHT--TFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQS 259 (539)
Q Consensus 189 ------~~~~~~liNG~~~~--~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R 259 (539)
.....++|||+.+. .+.+++|++|||||+|++.. ..++|||+||.|+|+ +..+|++.|.||||
T Consensus 605 ~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~ 676 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSG 676 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSS
T ss_pred ccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcE
Confidence 01135789999864 48999999999999998764 468999999999986 57899999999999
Q ss_pred EEEEEEeCCCCcceEEEEeee
Q 009242 260 VSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 260 ~dv~v~~~~~~g~~~~~~~~~ 280 (539)
++|+|+++ .||.|+++||..
T Consensus 677 ~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 677 ETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp EECCEECC-CCCCSCCEECCC
T ss_pred EEEEEEcC-CCeEEEEEeCCc
Confidence 99999999 799999999965
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=2.4e-30 Score=256.90 Aligned_cols=227 Identities=15% Similarity=0.159 Sum_probs=164.3
Q ss_pred CceEEECCCC-CceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCC
Q 009242 191 PDGVLINGQG-HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP 269 (539)
Q Consensus 191 ~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~ 269 (539)
...+++||+. .|.|++++|+++++|+.|..... +.+|+||.. ..+.||.+. .+...|.||++++..++++ .
T Consensus 54 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~-~ 125 (288)
T 3gdc_A 54 FKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT-P 125 (288)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-S
T ss_pred EEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-C
Confidence 3689999986 46999999999999999998764 589999975 457788754 2445789999999999997 7
Q ss_pred CcceEEEEeeecc-cC-ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcccccccc
Q 009242 270 PKDYYIVASTRFT-KN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINT 347 (539)
Q Consensus 270 ~g~~~~~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 347 (539)
+|.||+|||.... .+ ...-.+.+.+..... .+. .+
T Consensus 126 ~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~~~---~d----------------------------------- 162 (288)
T 3gdc_A 126 FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----RPP---AD----------------------------------- 162 (288)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----CCC---CS-----------------------------------
T ss_pred CccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----CCC---Cc-----------------------------------
Confidence 9999999996421 11 111222333332211 010 00
Q ss_pred ceEEEEcccc---cccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEE
Q 009242 348 TRTIVLANSA---PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVV 424 (539)
Q Consensus 348 ~r~~~l~~~~---~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~ 424 (539)
+++.+.+.. ........|.|||+.|... ...+.++.|++++|+
T Consensus 163 -~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~---------------------------------~~~l~v~~Ge~vr~~ 208 (288)
T 3gdc_A 163 -DEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM---------------------------------DFPVKVKQHELVRIH 208 (288)
T ss_dssp -EEEEEEEEEECCSSTTCCSEEEETTSTTHHH---------------------------------HSCEEEETTCCEEEE
T ss_pred -ceEEEEEeeEecCCCCCcceEEECccccccc---------------------------------CcccccCCCCEEEEE
Confidence 111110000 0001123589999876321 112567899999999
Q ss_pred EEcCCC--CCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhh
Q 009242 425 FQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQY 502 (539)
Q Consensus 425 i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d 502 (539)
+.|.+. +.|||||||+.|+|++.+.. +..+.++||+.|+|++++.|+|++++||.|+||||+++|++
T Consensus 209 l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~ 277 (288)
T 3gdc_A 209 LINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAE 277 (288)
T ss_dssp EEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHT
T ss_pred EEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHh
Confidence 999875 35999999999999875432 23457999999999999999999999999999999999999
Q ss_pred cccEEEEEEec
Q 009242 503 LGQQFYLKVWN 513 (539)
Q Consensus 503 ~GMm~~~~V~~ 513 (539)
.|||..|+|.+
T Consensus 278 ~GM~~~~~V~~ 288 (288)
T 3gdc_A 278 LGWMGFFEVSA 288 (288)
T ss_dssp TTCEEEEEEEC
T ss_pred cCCCEEEEEeC
Confidence 99999999964
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=4.1e-29 Score=251.16 Aligned_cols=246 Identities=13% Similarity=0.136 Sum_probs=168.2
Q ss_pred ceEEECCCC-CceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeE-EEEecCccccceeeceEEEcCCceEEEEEEeCCC
Q 009242 192 DGVLINGQG-HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMK-LVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP 269 (539)
Q Consensus 192 ~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~-via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~ 269 (539)
..+++||+. .|.|++++|+++++|+.|.... ...+|+||.... ..+.||.+. +....|.||++++..++++ .
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~-~ 96 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE-P 96 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-C
Confidence 589999986 5799999999999999999875 458999997654 236788753 2335789999999999998 7
Q ss_pred CcceEEEEeeecccCc--cceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcccccccc
Q 009242 270 PKDYYIVASTRFTKNV--LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINT 347 (539)
Q Consensus 270 ~g~~~~~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 347 (539)
+|.||+|||.....+. ....+.|.+..... .+++.....+....+. +. ...... .. .. ..
T Consensus 97 ~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~d~e~~l~l~---dw--~~~~~~-~~-~~-----~~--- 158 (318)
T 3g5w_A 97 AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTVTKDYILMLS---DW--VSSWAN-KP-GE-----GG--- 158 (318)
T ss_dssp CEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTCCEEEEEEEE---EE--CGGGTT-CT-TC-----CC---
T ss_pred CEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccccceeEEEEE---ee--cccccc-cc-cc-----CC---
Confidence 9999999996422111 11222333332211 0111000011110000 00 000000 00 00 00
Q ss_pred ceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEEEc
Q 009242 348 TRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN 427 (539)
Q Consensus 348 ~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N 427 (539)
........|.|||+.|.. +..+.++.|++++|+|.|
T Consensus 159 ----------~~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrliN 194 (318)
T 3g5w_A 159 ----------IPGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLIG 194 (318)
T ss_dssp ----------CTTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEEE
T ss_pred ----------CCCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEEe
Confidence 000112359999987521 112678999999999999
Q ss_pred CCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhh-----
Q 009242 428 NEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQY----- 502 (539)
Q Consensus 428 ~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d----- 502 (539)
.+...||||||||.|+|+++++.. +..|.++||+.|+|++++.|+|+|+|||.|+||||+++|++
T Consensus 195 ~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~ 264 (318)
T 3g5w_A 195 AGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKP 264 (318)
T ss_dssp CSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBS
T ss_pred CCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcC
Confidence 988899999999999999986542 22467899999999999999999999999999999999998
Q ss_pred -cccEEEEEEecCc
Q 009242 503 -LGQQFYLKVWNAV 515 (539)
Q Consensus 503 -~GMm~~~~V~~~~ 515 (539)
.|||..++|...+
T Consensus 265 ~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 265 DGGIMTTIEYEEVG 278 (318)
T ss_dssp SCBSEEEEEETTTC
T ss_pred CCCCEEEEEECCCC
Confidence 6899999997654
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=8.3e-29 Score=251.61 Aligned_cols=242 Identities=14% Similarity=0.155 Sum_probs=165.2
Q ss_pred CceEEECCCC-CceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEE---ecCccccceeeceEEEcCCceEEEEEEe
Q 009242 191 PDGVLINGQG-HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVE---VEGSHTIQNIYDSLDVHVGQSVSVLVTL 266 (539)
Q Consensus 191 ~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via---~DG~~~~p~~~d~l~l~pg~R~dv~v~~ 266 (539)
...+++||+. .|.|++++|+++|+||+|.+... ..+|.|| +.+.+ .||.+. +....|.||||+++.+++
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCCCeEEEEEEC
Confidence 3689999995 78999999999999999998754 3555555 45555 499853 344679999999999999
Q ss_pred CCCCcceEEEEeeeccc----CccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCccc
Q 009242 267 NQPPKDYYIVASTRFTK----NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHY 342 (539)
Q Consensus 267 ~~~~g~~~~~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~ 342 (539)
+ .+|.||+||+..... ....+.-|+ ..... ..++.....+....+.. +.... ...+...
T Consensus 96 ~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV--~p~~~---~~~~~~~d~e~~l~l~d-----~~~~~-~~~~~~~----- 158 (339)
T 2zwn_A 96 D-RIGTLWYHCHVNVNEHVGVRGMWGPLIV--DPKQP---LPIEKRVTKDVIMMMST-----WESAV-ADKYGEG----- 158 (339)
T ss_dssp C-SCEEEEEECCSSHHHHTTTSCCEEEEEE--ECSSC---CTTGGGCSEEEEEEEEE-----ECGGG-TTCTTCC-----
T ss_pred C-CCEEEEEEecCCchhhhhcCCceEeEEe--cCCCc---ccccccCCceEEEEeeh-----eeccc-ccccCCC-----
Confidence 8 699999999864311 222232233 22211 11111001111110000 00000 0000000
Q ss_pred cccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEE
Q 009242 343 GKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIE 422 (539)
Q Consensus 343 ~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 422 (539)
. . .......|.|||+.|.. ...+.++.|++++
T Consensus 159 -g----------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vr 190 (339)
T 2zwn_A 159 -G----------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVK 190 (339)
T ss_dssp -C----------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEE
T ss_pred -C----------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEE
Confidence 0 0 00112358999976521 1236788999999
Q ss_pred EEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhh--
Q 009242 423 VVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWER-- 500 (539)
Q Consensus 423 ~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H-- 500 (539)
|+|.|.+...||||||||+|+|++.++.. ..+|.++||+.|+||+++.|+|++++||.|++|||+++|
T Consensus 191 lrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~ 260 (339)
T 2zwn_A 191 IRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVT 260 (339)
T ss_dssp EEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSC
T ss_pred EEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcc
Confidence 99999988899999999999999986432 223678999999999999999999999999999999999
Q ss_pred ----hhcccEEEEEEecC
Q 009242 501 ----QYLGQQFYLKVWNA 514 (539)
Q Consensus 501 ----~d~GMm~~~~V~~~ 514 (539)
++.|||..+++...
T Consensus 261 ~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 261 AGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp BTTBSSCSSEEEEEETTS
T ss_pred cccccCCCcEEEEEECCC
Confidence 88999999998654
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=1.5e-27 Score=237.74 Aligned_cols=217 Identities=13% Similarity=0.097 Sum_probs=156.3
Q ss_pred ECCCC-CceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCC------
Q 009242 196 INGQG-HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ------ 268 (539)
Q Consensus 196 iNG~~-~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~------ 268 (539)
.||.. .|.|++++|++++++|.|..... .++|.||..+. -+.||.++. .-.|.||+++...++++.
T Consensus 51 ~~gt~PGP~i~~~~GD~v~v~~~N~l~~~-~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~ 123 (299)
T 3t9w_A 51 GGATVPGPVLEMWEGDTLEIDLVNTTDRV-LSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRAD 123 (299)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTT
T ss_pred CCCCccCceEEEECCeEEEEEEEECCCCC-ccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCC
Confidence 37765 47999999999999999998754 58999997654 356887542 124789999999888752
Q ss_pred ------CCcceEEEEeeecccC-------ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCC
Q 009242 269 ------PPKDYYIVASTRFTKN-------VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPN 335 (539)
Q Consensus 269 ------~~g~~~~~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~ 335 (539)
.+|.||++++...... .+.+.-|+ .....
T Consensus 124 ~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV--~~~~~------------------------------------ 165 (299)
T 3t9w_A 124 GSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVV--RRQGD------------------------------------ 165 (299)
T ss_dssp SCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEE--ECTTC------------------------------------
T ss_pred CcCCCCCceeEEEecCCcccccchhhhcccccceEEE--ecccc------------------------------------
Confidence 4699999998532111 12222222 11000
Q ss_pred CCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEe
Q 009242 336 PQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQV 415 (539)
Q Consensus 336 p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 415 (539)
...++++.+.+. .|.+|++.+. ....+.+
T Consensus 166 ---------~~~d~e~~l~~~--------~~~~Ng~~~~----------------------------------~~p~l~v 194 (299)
T 3t9w_A 166 ---------LLPKRQFTVVFN--------DMMINNRAHH----------------------------------DAPTFEA 194 (299)
T ss_dssp ---------CCCSEEEEEEEE--------TTEETTCCTT----------------------------------CCCEEEE
T ss_pred ---------cCccccceeeee--------eeeecCcccc----------------------------------cccccee
Confidence 012344544432 2788887542 1233678
Q ss_pred cCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEE---EEeCCceeeE
Q 009242 416 NLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL---VSLDNQGMWN 492 (539)
Q Consensus 416 ~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ir---f~adnpG~w~ 492 (539)
+.|++|+|++.|.+.+.|||||||+.|+|+..+.... ....+.++||+.|.|++...++ |+++|||.|+
T Consensus 195 ~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~ 266 (299)
T 3t9w_A 195 NLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWM 266 (299)
T ss_dssp ETTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEE
T ss_pred cCCCEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEE
Confidence 9999999999999989999999999999988765432 2234568999999999866554 4567899999
Q ss_pred EEeechhhhhcccEEEEEEecCcc
Q 009242 493 MRSAIWERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 493 ~HCHil~H~d~GMm~~~~V~~~~~ 516 (539)
||||+++|++.|||..|+|.+.+.
T Consensus 267 ~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 267 YHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEcCCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999999988754
No 43
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=9.3e-27 Score=233.74 Aligned_cols=217 Identities=12% Similarity=0.089 Sum_probs=156.7
Q ss_pred CCCC-CceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeC--------
Q 009242 197 NGQG-HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLN-------- 267 (539)
Q Consensus 197 NG~~-~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~-------- 267 (539)
||.. .|.|+++.|++++++|.|..... ..+|.||..+.- +.||.+.. .-.|.||+++...+++.
T Consensus 36 ~~t~PGP~i~~~~Gd~v~v~~~N~l~~~-~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~ 108 (313)
T 3tas_A 36 KATIPGPLIELNEGDTLHIEFENTMDVP-VSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADG 108 (313)
T ss_dssp CCBSSCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTS
T ss_pred CccccCCeEEEECCCEEEEEEEECCCCC-ccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccc
Confidence 4433 46999999999999999998754 489999876542 46887531 22488999998888764
Q ss_pred ----CCCcceEEEEeeecccC-------ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCC
Q 009242 268 ----QPPKDYYIVASTRFTKN-------VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNP 336 (539)
Q Consensus 268 ----~~~g~~~~~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p 336 (539)
+..|.||+|||.....+ .+.+.-|| .....
T Consensus 109 ~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV--~~~~~------------------------------------- 149 (313)
T 3tas_A 109 TWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV--RRKGD------------------------------------- 149 (313)
T ss_dssp CEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEE--ECTTC-------------------------------------
T ss_pred cccCCCceEEEEeecCcccccchhhhhccccCceEe--ecccc-------------------------------------
Confidence 23588999998532211 12222222 11100
Q ss_pred CCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEec
Q 009242 337 QGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN 416 (539)
Q Consensus 337 ~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 416 (539)
...++++.+.++ .|++|+..+.. ...+.++
T Consensus 150 --------~~~d~e~~l~~~--------d~t~Ng~~~~~----------------------------------~~~l~v~ 179 (313)
T 3tas_A 150 --------VLPDRTHTIVFN--------DMTINNRPAHT----------------------------------GPDFEAT 179 (313)
T ss_dssp --------BCCSEEEEEEEE--------TTEETTCCTTC----------------------------------CCCEEEE
T ss_pred --------ccccccceeecc--------chhcccCCccc----------------------------------ccccccc
Confidence 012345554442 27888875421 1226788
Q ss_pred CCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEe---CCceeeEE
Q 009242 417 LHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL---DNQGMWNM 493 (539)
Q Consensus 417 ~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a---dnpG~w~~ 493 (539)
.|++|+|++.|.+.+.|||||||+.|+|+..+.... ....+.++||+.|.|++...+++.+ +|||.|+|
T Consensus 180 ~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~ 251 (313)
T 3tas_A 180 VGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMY 251 (313)
T ss_dssp TTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEE
T ss_pred cCCEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEE
Confidence 999999999999999999999999999988754321 1235789999999999998888765 58999999
Q ss_pred EeechhhhhcccEEEEEEecCccc
Q 009242 494 RSAIWERQYLGQQFYLKVWNAVHS 517 (539)
Q Consensus 494 HCHil~H~d~GMm~~~~V~~~~~~ 517 (539)
|||+++|++.|||..|+|.+++..
T Consensus 252 HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 252 HCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp EECSHHHHHTTCEEEEEEECTTCC
T ss_pred EeCChHHHHCCCeEEEEEECCCCC
Confidence 999999999999999999998764
No 44
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=2.6e-25 Score=222.64 Aligned_cols=233 Identities=15% Similarity=0.100 Sum_probs=139.9
Q ss_pred eEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcccc----ceeeceEEEcCCceEEEEEEeCC
Q 009242 193 GVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI----QNIYDSLDVHVGQSVSVLVTLNQ 268 (539)
Q Consensus 193 ~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~l~l~pg~R~dv~v~~~~ 268 (539)
..++||...|.|++++|+++++||.|... ....+|.||..+.. +.||.+.. +...+...|.||+|++..+++++
T Consensus 51 ~~~~n~~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 51 QSRTSGLLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCSSCCSCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred ccccCCccCCEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 35689999999999999999999999876 45588888877432 57887642 23334578999999999999975
Q ss_pred CC---------cceEEEEeeeccc---CccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCC
Q 009242 269 PP---------KDYYIVASTRFTK---NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNP 336 (539)
Q Consensus 269 ~~---------g~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p 336 (539)
.+ |.||+|+|..... ..+.+ ++|......... .+.+.....+... .+..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~-~~~~~~~d~e~~l----------~~~d------- 189 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTE-DGTQKMFEKQHVL----------MFAV------- 189 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCT-TSSBSSSCCCCCC----------BCCE-------
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCCCCc-cCCcCcccceEEE----------EEEe-------
Confidence 43 6999999954211 12333 333332211100 0000000000000 0000
Q ss_pred CCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEec
Q 009242 337 QGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN 416 (539)
Q Consensus 337 ~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 416 (539)
+.-..+. .......|.|||+.|.. .| .+.++
T Consensus 190 --------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v~ 220 (306)
T 1sdd_A 190 --------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITVC 220 (306)
T ss_dssp --------------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCCC
T ss_pred --------------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEEc
Confidence 0000000 00112347889986521 11 14567
Q ss_pred CCcEEEEEEEcCCC--CCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEE
Q 009242 417 LHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMR 494 (539)
Q Consensus 417 ~g~~ve~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~H 494 (539)
.|++++|+|.|.+. ..||||+||+.|++ . +.++||+.|.|++.+.|+|++++||.|+||
T Consensus 221 ~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----d---------------G~~~dtv~l~pger~~v~~~~~~pG~~~~h 281 (306)
T 1sdd_A 221 AHDHISWHLIGMSSGPELFSIHFNGQVLEQ----N---------------HHKISAITLVSATSTTANMTVSPEGRWTIA 281 (306)
T ss_dssp CC------BBCCCSSSCEECCBCSSTTCEE----T---------------TEECSCCCEETTCCBC--------CCCCCB
T ss_pred CCCEEEEEEEeCCCCCccEEEEECCcEeee----C---------------CEEcceEEECCCcEEEEEEEcCCCeEEEEE
Confidence 89999999999874 57999999999986 1 135899999999999999999999999999
Q ss_pred eechhhhhcccEEEEEEecC
Q 009242 495 SAIWERQYLGQQFYLKVWNA 514 (539)
Q Consensus 495 CHil~H~d~GMm~~~~V~~~ 514 (539)
||+++|++.|||..|+|.+.
T Consensus 282 ch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 282 SLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CCSTTTGGGTCBCCC-----
T ss_pred eCChHHHhcCCeEEEEEecC
Confidence 99999999999999999753
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.89 E-value=2.9e-22 Score=202.33 Aligned_cols=243 Identities=15% Similarity=0.097 Sum_probs=163.0
Q ss_pred ceEEECCCC-CceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCC
Q 009242 192 DGVLINGQG-HTTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP 269 (539)
Q Consensus 192 ~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~ 269 (539)
..+++||+. .|.|++++|++++||++|.... ..+.+|+||.. +.||... ...|.||+++++.++++ .
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~-~ 127 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKAL-Q 127 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECC-S
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECC-C
Confidence 579999984 5799999999999999999763 46688998863 5688642 22489999999999998 5
Q ss_pred CcceEEEEeeecc-c---CccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcccccc
Q 009242 270 PKDYYIVASTRFT-K---NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKI 345 (539)
Q Consensus 270 ~g~~~~~~~~~~~-~---~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~ 345 (539)
+|.||+|||.... . ....+ +++... .. ++|. .+.+..+- ..+ +.... .... .+..
T Consensus 128 ~Gt~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p~---~d~e~~l~-~~d--~~~~~-----~~~~---~g~~ 186 (327)
T 1kbv_A 128 PGLYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLPK---VDKEFYIV-QGD--FYTKG-----KKGA---QGLQ 186 (327)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCCC---CSEEEEEE-EEE--ECBSS-----CTTC---CEEE
T ss_pred CeEEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCCC---CceEEEEE-eee--eeccC-----cccc---cccc
Confidence 8999999985321 1 12233 233332 21 1221 11110000 000 00000 0000 0000
Q ss_pred ccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEE
Q 009242 346 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVF 425 (539)
Q Consensus 346 ~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i 425 (539)
. +.+..... .....+.|||+.+... ....+.++.|++++|+|
T Consensus 187 ~----~~~~~~~~--~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRl 228 (327)
T 1kbv_A 187 P----FDMDKAVA--EQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYV 228 (327)
T ss_dssp C----BCHHHHHH--TCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEE
T ss_pred c----cChhHhcc--CCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEE
Confidence 0 00000000 1113578999865210 01346789999999999
Q ss_pred EcCC-CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhh-hc
Q 009242 426 QNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQ-YL 503 (539)
Q Consensus 426 ~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~-d~ 503 (539)
.|.+ ...|+||||||.|+|++.+++.. .|.++|++.|.||+++.|.|++++||.|.+|||+..|. ..
T Consensus 229 iN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~ 297 (327)
T 1kbv_A 229 GNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNK 297 (327)
T ss_dssp EEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHS
T ss_pred ECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccC
Confidence 9976 57899999999999999876522 25789999999999999999999999999999999995 88
Q ss_pred ccEEEEEEecCc
Q 009242 504 GQQFYLKVWNAV 515 (539)
Q Consensus 504 GMm~~~~V~~~~ 515 (539)
||++.++|....
T Consensus 298 g~~a~l~~~g~~ 309 (327)
T 1kbv_A 298 GALGQLKVEGAE 309 (327)
T ss_dssp SCEEEEEEESCC
T ss_pred CcEEEEEECCCC
Confidence 999999997654
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=1.6e-22 Score=222.76 Aligned_cols=244 Identities=14% Similarity=0.212 Sum_probs=149.5
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccc----eeeceEEEcCCceEEEEEEeCCC----
Q 009242 198 GQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ----NIYDSLDVHVGQSVSVLVTLNQP---- 269 (539)
Q Consensus 198 G~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p----~~~d~l~l~pg~R~dv~v~~~~~---- 269 (539)
+-..|.|++++|+++++||.|.... ...+|.||.... .+.||.+... ..+....|.||++++..+++++.
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~ 142 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPE 142 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCC
T ss_pred CCcCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCC
Confidence 3456799999999999999999875 458888887664 4789986421 22335679999999999999863
Q ss_pred -Cc----ceEEEEeeecccC---ccceEEEEEecCCCCCCCCCCCCCCCcccccccccc-cccccccccCCCCCCCCCCc
Q 009242 270 -PK----DYYIVASTRFTKN---VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQA-RTFRWNLTANAARPNPQGSF 340 (539)
Q Consensus 270 -~g----~~~~~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~-~~l~~~l~~~~~~p~p~~~~ 340 (539)
+| .||+|+|.....+ .+.+.-||.-.+... .....|.. ..+....+... ....+.+.. +....
T Consensus 143 ~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~-~~~~~~~~-~~e~~l~l~~~d~~~~w~~~~-----~~~~~- 214 (647)
T 1sdd_B 143 NPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLD-KETNMPVD-MREFVLLFMVFDEKKSWYYDK-----KPTRS- 214 (647)
T ss_dssp SSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSC-TTSCCCSS-CCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcc-cccCCCCc-ceeEEEEEEeecCcccccccc-----Ccccc-
Confidence 57 9999999742222 233333333222211 10011110 01111111100 000000000 00000
Q ss_pred cccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcE
Q 009242 341 HYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420 (539)
Q Consensus 341 ~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 420 (539)
+.. .+.. + ......+.|||+.|. .| .+.++.|++
T Consensus 215 -~~~--~~~~--~------~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~ 248 (647)
T 1sdd_B 215 -WRR--ASSE--V------KNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEW 248 (647)
T ss_dssp --------------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCE
T ss_pred -ccc--CCcc--h------hhcCceeccCCEecC---CC--------------------------------CeEEcCCCE
Confidence 000 0000 0 011245889998751 11 246788999
Q ss_pred EEEEEEcCCC--CCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeech
Q 009242 421 IEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIW 498 (539)
Q Consensus 421 ve~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil 498 (539)
++|+|.|.+. +.||||+|||.|+|++. ++.++||+.|.|++++.|+|++++||.|+||||++
T Consensus 249 vrlrliN~~~~~~~h~~hlhG~~f~vi~~----------------d~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~ 312 (647)
T 1sdd_B 249 VRLHLLNLGGSRDIHVVHFHGQTLLENGT----------------QQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVG 312 (647)
T ss_dssp EEEEEEECCCTTCCEEEEETTCCEEECSS----------------SCEEESSEEECTTEEEEEEEECCSSEEEEEECCCH
T ss_pred EEEEEEeCCCCCcceeEEEcCcEEEEecC----------------CCcccceEEECCCeEEEEEEEeccceEeecccCcc
Confidence 9999999874 48999999999999864 24578999999999999999999999999999999
Q ss_pred hhhhcccEEEEEEec
Q 009242 499 ERQYLGQQFYLKVWN 513 (539)
Q Consensus 499 ~H~d~GMm~~~~V~~ 513 (539)
+|++.|||..|.|.+
T Consensus 313 ~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 313 EIQRAGMQTPFLIVD 327 (647)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred cccccccccceeeec
Confidence 999999999999964
No 47
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=9.4e-22 Score=200.11 Aligned_cols=257 Identities=12% Similarity=0.127 Sum_probs=158.1
Q ss_pred CceEEECCCC-CceEEEecCCEEEEEEEecCC-CCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCC
Q 009242 191 PDGVLINGQG-HTTFNGDQGKTYMFRISNVGL-STSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ 268 (539)
Q Consensus 191 ~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~ 268 (539)
...+++||+. .|.|++++|+++|+|+.|... ...+.+++++... +.||..+ . .|.||+++++.++++
T Consensus 59 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~~~y~~~~~- 127 (340)
T 2bw4_A 59 IHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEETTLRFKAT- 127 (340)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEEEEEEECC-
T ss_pred EEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCEEEEEEECC-
Confidence 3689999985 679999999999999999974 2456778887642 2233322 1 399999999999998
Q ss_pred CCcceEEEEeeec-----ccCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcc-c
Q 009242 269 PPKDYYIVASTRF-----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFH-Y 342 (539)
Q Consensus 269 ~~g~~~~~~~~~~-----~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~-~ 342 (539)
.+|.||+|||... ......+.-|++ .........+.|.. .+.+..+ ...+. .+. ..+.+.+. +
T Consensus 128 ~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~-~~~~~~~~~~~p~~--~d~e~~l-~l~D~--~~~-----~~~~g~~~~~ 196 (340)
T 2bw4_A 128 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVL-PRDGLKDEKGQPLT--YDKIYYV-GEQDF--YVP-----KDEAGNYKKY 196 (340)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEE-CTBCEECTTSCEEC--CSEEEEE-EEEEE--CCC-----BCTTSCBCCC
T ss_pred CCeEEEEEcCCCCchhhHHhCcCEEEEEEc-cCcCcccccCCCcC--cceeEEE-eeeee--eec-----cccCCccccc
Confidence 5999999999642 112333333332 21110000001110 1111000 00000 000 00000000 0
Q ss_pred ccc--ccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcE
Q 009242 343 GKI--NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420 (539)
Q Consensus 343 ~~~--~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 420 (539)
... ..... +.. . .......|.|||+.|... ....+.++.|++
T Consensus 197 ~~~~~~~~~~--~~~-~-~~~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~r 240 (340)
T 2bw4_A 197 ETPGEAYEDA--VKA-M-RTLTPTHIVFNGAVGALT--------------------------------GDHALTAAVGER 240 (340)
T ss_dssp CSHHHHHHHH--HHH-H-HTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCE
T ss_pred ccccccccch--hhH-h-hcCCCCEEEECCccCCcc--------------------------------CCCceEcCCCCE
Confidence 000 00000 000 0 001123589999875321 012367889999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCC-cceEEEeCCCcEEEEEEEeCCceeeEEEeech-
Q 009242 421 IEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMWNMRSAIW- 498 (539)
Q Consensus 421 ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~w~~HCHil- 498 (539)
++|++.|.+...|++|+|||.|+|+.. |.+. ..|. ++||+.|+||+.+.|.|++++||.|+||||++
T Consensus 241 ~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 241 VLVVHSQANRDTRPHLIGGHGDYVWAT--GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEETT--CCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEECCCCCccceEEecCcceEEeCC--Cccc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 998888877788999999999999863 2221 1122 47999999999999999999999999999999
Q ss_pred hhhhcccEEEEEEecCcc
Q 009242 499 ERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 499 ~H~d~GMm~~~~V~~~~~ 516 (539)
+|++.|||..|+|.....
T Consensus 310 ~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 310 EAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp HHHTTSCEEEEEEESCCC
T ss_pred HHHhCCCEEEEEECCCCc
Confidence 699999999999987543
No 48
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.86 E-value=1.3e-20 Score=190.95 Aligned_cols=258 Identities=9% Similarity=0.048 Sum_probs=152.7
Q ss_pred CceEEECCCC-CceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCC
Q 009242 191 PDGVLINGQG-HTTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ 268 (539)
Q Consensus 191 ~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~ 268 (539)
...+++||+. .|.|++++|+++++|+.|.+.. ..+.++++++. ..||.. +. . .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~PG~~~~y~f~~~- 120 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINPGEKVVLRFKAT- 120 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCCCCEEEEEEECC-
Confidence 3589999987 6799999999999999999642 23455665532 123221 11 1 399999999999998
Q ss_pred CCcceEEEEeeec------ccCccceEEEEEecCCCC-CCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcc
Q 009242 269 PPKDYYIVASTRF------TKNVLTATAILHYTNSHS-PASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFH 341 (539)
Q Consensus 269 ~~g~~~~~~~~~~------~~~~~~~~ail~y~~~~~-~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~ 341 (539)
.+|.||+|||... ......+.-|+. .... +.....|. ..+.+..+ ...+. .+.. ...+.+.
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~--~~~~~~~~~~~p~--~~d~e~~l-~l~D~--~~~~-----~~~g~~~ 188 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL--PRDGLKDHEGKPV--RYDTVYYI-GESDH--YIPK-----DEDGTYM 188 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEE--CTTCCBCTTSCBC--CCSEEEEE-EEEEE--CCCB-----CTTSCBC
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEc--cCcCccccccCCC--ccchheee-eeeee--ccCc-----ccccccc
Confidence 6999999999642 112333433443 2211 00000111 01111100 00110 0000 0000000
Q ss_pred -ccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcE
Q 009242 342 -YGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420 (539)
Q Consensus 342 -~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 420 (539)
+... . ..+.-............|.|||+.+..+ ....+.++.|+.
T Consensus 189 ~~~~~-~-~~~~~~~~~~~~~~~~~~~ING~~~~~~--------------------------------~~~~l~v~~Ger 234 (333)
T 1mzy_A 189 RFSDP-S-EGYEDMVAVMDTLIPSHIVFNGAVGALT--------------------------------GEGALKAKVGDN 234 (333)
T ss_dssp CCSSH-H-HHHHHHHHHHTTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCE
T ss_pred ccccc-c-ccccchhHHhhccCCcEEEECCcccccC--------------------------------CCcceEecCCCE
Confidence 0000 0 0000000000001123589999864211 012367889999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCC-cceEEEeCCCcEEEEEEEeCCceeeEEEeechh
Q 009242 421 IEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWE 499 (539)
Q Consensus 421 ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~ 499 (539)
++|++.|.+...|++++|+|.|+|++ + |.+. ..|. ++||+.|.||+.+.|.|.|++||.|+||||+++
T Consensus 235 ~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~ 303 (333)
T 1mzy_A 235 VLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLI 303 (333)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhh
Confidence 88877776655566667888899987 3 3221 1122 589999999999999999999999999999999
Q ss_pred hh-hcccEEEEEEecCcc
Q 009242 500 RQ-YLGQQFYLKVWNAVH 516 (539)
Q Consensus 500 H~-d~GMm~~~~V~~~~~ 516 (539)
|+ +.|||..|+|.....
T Consensus 304 h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 304 EAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp HHHTTCCEEEEEEESCCC
T ss_pred hHhhCCCEEEEEEcCCCC
Confidence 97 999999999987543
No 49
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=8.7e-23 Score=226.44 Aligned_cols=244 Identities=13% Similarity=0.136 Sum_probs=151.9
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCC---------
Q 009242 198 GQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ--------- 268 (539)
Q Consensus 198 G~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~--------- 268 (539)
|-..|.|+++.|++++++|.|.... ...+|.||..+....-||.+- ....|.||++++..+++++
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~ 268 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEF 268 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCC
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCC
Confidence 3455789999999999999999874 458888887665444357642 1246899999999999874
Q ss_pred CCcceEEEEeeecccC---ccceEEEEEecCCCCCCCCCCCCCCCcccccccccccc-cccccccC--CCCCCCCCCccc
Q 009242 269 PPKDYYIVASTRFTKN---VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQART-FRWNLTAN--AARPNPQGSFHY 342 (539)
Q Consensus 269 ~~g~~~~~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~-l~~~l~~~--~~~p~p~~~~~~ 342 (539)
.+|.||+|+|.....+ .+.+.-|| ...........+.....+....+..... ..+-+... .....|.. +
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV--~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~-- 343 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLV--CHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-I-- 343 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEE--ECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-C--
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEE--CCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccc-c--
Confidence 5799999998654211 23333233 2222110000000000111100000000 00000000 00000100 0
Q ss_pred cccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEE
Q 009242 343 GKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIE 422 (539)
Q Consensus 343 ~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve 422 (539)
.. .+.. +. .....|.|||+.|.. ...+.++.|++++
T Consensus 344 ~~--~d~~--~~------~~~~~~~ING~~~~~----------------------------------~~~l~v~~Ge~vr 379 (770)
T 2r7e_B 344 QM--EDPT--FK------ENYRFHAINGYIMDT----------------------------------LPGLVMAQDQRIR 379 (770)
T ss_dssp CS--SSSS--ST------TTSCEECTTSCTTTT----------------------------------CCCCCCCSSSCEE
T ss_pred cc--CCcc--cc------ccCCccccCCccCCC----------------------------------CCCeEEeCCCEEE
Confidence 00 0000 00 111237788875411 1124578899999
Q ss_pred EEEEcCCC--CCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhh
Q 009242 423 VVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWER 500 (539)
Q Consensus 423 ~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H 500 (539)
|+|.|.+. +.||||||||.|+|++.+ +.++||+.|+|++++.|+|++++||.|+||||+++|
T Consensus 380 ~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H 443 (770)
T 2r7e_B 380 WYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEH 443 (770)
T ss_dssp EECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHH
T ss_pred EEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEeccccc
Confidence 99999873 489999999999998763 137999999999999999999999999999999999
Q ss_pred hhcccEEEEEEe
Q 009242 501 QYLGQQFYLKVW 512 (539)
Q Consensus 501 ~d~GMm~~~~V~ 512 (539)
++.|||..|.|.
T Consensus 444 ~~~GM~~~~~V~ 455 (770)
T 2r7e_B 444 LHAGMSTLFLVY 455 (770)
T ss_dssp HTTBCCCCCCBC
T ss_pred cccccccccccc
Confidence 999999999984
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.83 E-value=1.1e-19 Score=191.37 Aligned_cols=246 Identities=14% Similarity=0.069 Sum_probs=164.1
Q ss_pred ceEEECCCC-CceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCC
Q 009242 192 DGVLINGQG-HTTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP 269 (539)
Q Consensus 192 ~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~ 269 (539)
..+++||+. .|.++++.|++++||+.|.... ..+++|+||+. ..||... +..|.||+++++.++++ .
T Consensus 49 ~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~-~ 117 (442)
T 2zoo_A 49 VFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL-N 117 (442)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-C
Confidence 589999987 6799999999999999999653 46789999975 3677632 23689999999999998 6
Q ss_pred CcceEEEEeeec-ccCc-cceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcccccccc
Q 009242 270 PKDYYIVASTRF-TKNV-LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINT 347 (539)
Q Consensus 270 ~g~~~~~~~~~~-~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 347 (539)
+|.||+|||... ..+. ..-.+.+.+.... ++|. ...++...+. + +...... ..+ +
T Consensus 118 ~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~---d--~~~~~~~--~~~------~---- 174 (442)
T 2zoo_A 118 PGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQG---D--FYTKGEF--GEA------G---- 174 (442)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEE---E--ECBSSCT--TCC------E----
T ss_pred CeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEee---e--eeccCcc--ccc------c----
Confidence 999999997421 1111 1122333333321 1221 1111111110 0 0000000 000 0
Q ss_pred ceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEEEEEEEc
Q 009242 348 TRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN 427 (539)
Q Consensus 348 ~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ve~~i~N 427 (539)
...+.+.... ......+.|||+.+... ....+.++.|+++.|+|.|
T Consensus 175 ~~~~~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrliN 220 (442)
T 2zoo_A 175 LQPFDMAKAI--DEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYIGN 220 (442)
T ss_dssp EECBCHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEEEE
T ss_pred cccCChhHhc--cCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEEEe
Confidence 0000000000 01123478999864210 0123678899999999999
Q ss_pred CC-CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhh-hhccc
Q 009242 428 NE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWER-QYLGQ 505 (539)
Q Consensus 428 ~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H-~d~GM 505 (539)
.+ ...|+||+||+.|.|++.++... .|.+.|++.|.||+...|.|+++++|.|++|||.+.| .+.||
T Consensus 221 ~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~ 289 (442)
T 2zoo_A 221 GGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGA 289 (442)
T ss_dssp EESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSC
T ss_pred CCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCc
Confidence 76 57899999999999999865422 2568899999999999999999999999999999999 59999
Q ss_pred EEEEEEecCcc
Q 009242 506 QFYLKVWNAVH 516 (539)
Q Consensus 506 m~~~~V~~~~~ 516 (539)
+..++|...+.
T Consensus 290 ~a~l~v~~~~~ 300 (442)
T 2zoo_A 290 LAMLKVEGPDD 300 (442)
T ss_dssp EEEEEEESCCC
T ss_pred eEEEEecCCCC
Confidence 99999987664
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.82 E-value=8e-19 Score=178.17 Aligned_cols=256 Identities=13% Similarity=0.178 Sum_probs=155.9
Q ss_pred CceEEECCCC-CceEEEecCCEEEEEEEecCCC-CeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCC
Q 009242 191 PDGVLINGQG-HTTFNGDQGKTYMFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ 268 (539)
Q Consensus 191 ~~~~liNG~~-~~~l~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~ 268 (539)
...+++||+. .|.|++++|+++++|+.|.... ..+.++++|+.. .||.. +. . .|.||++++..++++
T Consensus 53 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~~y~f~~~- 121 (336)
T 1oe1_A 53 LQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQATLRFKAD- 121 (336)
T ss_dssp EEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEEEEEEECC-
Confidence 3689999984 5799999999999999998753 456889998753 23332 11 1 399999999999998
Q ss_pred CCcceEEEEeeecc-----cCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCc-cc
Q 009242 269 PPKDYYIVASTRFT-----KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSF-HY 342 (539)
Q Consensus 269 ~~g~~~~~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~-~~ 342 (539)
.+|.||+|||.... .....+.-|++-... .+ .+.+.....+.+..+ ...+. .+.. ...+.+ .+
T Consensus 122 ~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~--~~~~~~~~~D~e~~l-~~~D~--~~~~-----~~~g~~~~~ 190 (336)
T 1oe1_A 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LK--DPQGKPLHYDRAYTI-GEFDL--YIPK-----GPDGKYKDY 190 (336)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CB--CTTSCBCCCSEEEEE-EEEEE--CCCB-----CTTSSBCCC
T ss_pred CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-Cc--ccccCcccCCceeEe-eeeee--eecc-----ccCCceeec
Confidence 59999999996421 123334334432211 10 011110001111000 00000 0000 000000 00
Q ss_pred ccc-cc-ceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcE
Q 009242 343 GKI-NT-TRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420 (539)
Q Consensus 343 ~~~-~~-~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 420 (539)
... .. ... +.. .. ......+.|||+.+... +...+.++.|++
T Consensus 191 ~~~~~~~~~~--~~~-~~-~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~Ger 234 (336)
T 1oe1_A 191 ATLAESYGDT--VQV-MR-TLTPSHIVFNGKVGALT--------------------------------GANALTAKVGET 234 (336)
T ss_dssp SSTGGGHHHH--HHH-HH-TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCE
T ss_pred ccccccccch--hhH-hh-cCCCCEEEECCeeccCC--------------------------------CCcceEcCCCCE
Confidence 000 00 000 000 00 01123588898764211 123467889999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCC--cceEEEeCCCcEEEEEEEeCCceeeEEEeech
Q 009242 421 IEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL--TRHTAQVYPQSWTVILVSLDNQGMWNMRSAIW 498 (539)
Q Consensus 421 ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~adnpG~w~~HCHil 498 (539)
++|+..+.+...+++++|||.|.|+. + |.+ ..|. +.||+.|++|+.+.+.+++++||.|+||||.+
T Consensus 235 vRlin~~~~~~~~~~~i~gh~~~Vi~-D-G~~----------~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~ 302 (336)
T 1oe1_A 235 VLLIHSQANRDTRPHLIGGHGDWVWE-T-GKF----------ANPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNL 302 (336)
T ss_dssp EEEEEEESSSCBCEEETTCCEEEEET-T-CCT----------TSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSH
T ss_pred EEEEecCCCCccceEEECCcCceEeC-C-CcC----------cCCccccceEEEECCCCcEEEEEEcCCCceEEEEechh
Confidence 98866666666677778999999996 3 222 1222 46999999999999999999999999999999
Q ss_pred hhh-hcccEEEEEEecCcc
Q 009242 499 ERQ-YLGQQFYLKVWNAVH 516 (539)
Q Consensus 499 ~H~-d~GMm~~~~V~~~~~ 516 (539)
.|. +.||++.|+|.+...
T Consensus 303 ~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 303 IEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp HHHHTTSCEEEEEEESCCC
T ss_pred hccccCCCeEEEEECCCCC
Confidence 886 999999999976543
No 52
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.75 E-value=6e-17 Score=170.10 Aligned_cols=237 Identities=16% Similarity=0.188 Sum_probs=162.6
Q ss_pred CeEEEEEEEEEEeecC------------CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCC
Q 009242 28 PYRFYTWTVTSGTLSP------------LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKN 94 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~------------~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~ 94 (539)
..+++.|.+++..... .|.....+++||+. .|.|+|++| ++++|+.|.. ...+.+|++|..+..
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v- 221 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL- 221 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-
Confidence 4577888877654322 13345679999996 799999999 9999999998 456899999976543
Q ss_pred CCCCCCcc-----c-CCccCCCCeEEEEEEeCCCccceeEccCcchhhc---cce--------------eeEEE--EecC
Q 009242 95 SWQDGVLG-----T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRA---AGG--------------YGGIN--IYQR 149 (539)
Q Consensus 95 ~~~DG~~~-----~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~---~Gl--------------~G~li--V~~~ 149 (539)
.+.||.+. + ...|.|||+++..+++ +++|.||++|+...... .|| ....+ +...
T Consensus 222 i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 222 IAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp EEETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred EecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 45799753 2 5679999999999997 45999999997431110 021 11222 2221
Q ss_pred CCCCCCCCCCCCceeEEeeeecccc-hHHHHhhhcCCCCCCCCceEEECCCCCc----eEEEecCCEEEEEEEecCCCCe
Q 009242 150 PRIPIPYPIQDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLINGQGHT----TFNGDQGKTYMFRISNVGLSTS 224 (539)
Q Consensus 150 ~~~~~~~~~~~~e~~l~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~liNG~~~~----~l~v~~G~~~rlRliN~~~~~~ 224 (539)
. .+.+.+.... -+.+..... ...+ .+..+. .+..++|||+.+. .+.++.|++++|+|.|.+.. .
T Consensus 301 ~-~~~~~p~~l~----~~~~l~~~~~~r~~--~l~~~~---~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~-~ 369 (439)
T 2xu9_A 301 P-KPLPLPKALS----PFPTLPAPVVTRRL--VLTEDM---MAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQGDM-D 369 (439)
T ss_dssp C-CCCCCCSCCC----CCCCCCCCSEEEEE--EEEEEG---GGTEEEETTBCCCTTCCCEEECTTCEEEEEEEECSSS-C
T ss_pred C-ccccCcccCC----CcccCCCCCcceEE--EEEeec---cCceEeECCEECCCCCCceecCCCCEEEEEEEcCCCC-C
Confidence 1 1111100000 000000000 0000 000000 1137899999874 58899999999999999764 5
Q ss_pred eeEEEeCCeeEEEEecCccc-cceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 225 FNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 225 ~~~~l~gh~~~via~DG~~~-~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
|+||||||.|+|++.+|... .|...||+.+.||+++.+.++++ +||.|.+|||..
T Consensus 370 HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 370 HPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp EEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 69999999999999999875 58889999999999999999987 899999999964
No 53
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.75 E-value=3.9e-17 Score=171.84 Aligned_cols=232 Identities=16% Similarity=0.154 Sum_probs=153.3
Q ss_pred eEEEEEEEEEEeecCCC-----------eeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeee-CCcCCCCCC
Q 009242 29 YRFYTWTVTSGTLSPLG-----------VPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTW-NGIKQRKNS 95 (539)
Q Consensus 29 ~~~~~l~~~~~~~~~~G-----------~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~-HG~~~~~~~ 95 (539)
.+++.|.+++.....+| .....+++||+. .|+|+|++| ++++||.|.. .....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 56788888876654433 334679999995 799999999 9999999998 45688999 8975442 4
Q ss_pred CCCCCcc-----c-CCccCCCCeEEEEEEeCCCccceeEccCcchhhcccee-----------eEEE-EecCCCCCCCCC
Q 009242 96 WQDGVLG-----T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGY-----------GGIN-IYQRPRIPIPYP 157 (539)
Q Consensus 96 ~~DG~~~-----~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~-----------G~li-V~~~~~~~~~~~ 157 (539)
..||.+. + ...|.|||++++.+++. +.|+||++++........+. .+++ +....... +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 5899642 3 67899999999999974 68999999986532211111 1111 11110000 00
Q ss_pred CCCCceeEEeeeecccch-HHHHhhhcCCCCCCCCceEEECCCCCc----eEEEecCCEEEEEEEecCCCCeeeEEEeCC
Q 009242 158 IQDGDFTLLIGDWFKTNH-KILRQTLDSGKSLPFPDGVLINGQGHT----TFNGDQGKTYMFRISNVGLSTSFNFRIQGH 232 (539)
Q Consensus 158 ~~~~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~----~l~v~~G~~~rlRliN~~~~~~~~~~l~gh 232 (539)
..+.+..|..+..... ......+.-+ ..++|||+.+. .+.++.|++++|+|+|. ..++||||||
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh 374 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGV 374 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTC
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCc
Confidence 0000000000000000 0000000000 04789999874 58999999999999997 4689999999
Q ss_pred eeEEEEecCccc---cceeeceEEEcCCceEEEEEEeCCCCcc----eEEEEeee
Q 009242 233 TMKLVEVEGSHT---IQNIYDSLDVHVGQSVSVLVTLNQPPKD----YYIVASTR 280 (539)
Q Consensus 233 ~~~via~DG~~~---~p~~~d~l~l~pg~R~dv~v~~~~~~g~----~~~~~~~~ 280 (539)
.|+|++.||.+. +|.++||+.| |+++.|.|+++ ++|. |.+|||..
T Consensus 375 ~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 375 MFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred eEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 999999999875 4788999999 99999999998 5666 99999965
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.70 E-value=3.7e-16 Score=167.35 Aligned_cols=244 Identities=15% Similarity=0.152 Sum_probs=160.2
Q ss_pred EEEEEEEEEEeecCCCe----------eeEEEEECCCCC---------CceEEEEcCCEEEEEEEECCC-CCceeeeCCc
Q 009242 30 RFYTWTVTSGTLSPLGV----------PQEVILINGQFP---------GPRLDVVTNDNIILNVINKLD-QPFLLTWNGI 89 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G~----------~~~~~~~nG~~p---------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~ 89 (539)
+++.|.+++.....++. ....+++||+.. -|+|+|++|+++++||.|... ....+|++|.
T Consensus 163 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh 242 (521)
T 1v10_A 163 ASTVITIADWYHSLSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGH 242 (521)
T ss_dssp GGGEEEEEEECSSCCC-------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTC
T ss_pred ceeEEEEcccccCCHHHHhhccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCC
Confidence 35566666644333221 235789999853 189999999999999999984 5678999997
Q ss_pred CCCCCCCCCCCcc----c-CCccCCCCeEEEEEEeCCCccceeEccCcch---hhccceeeEEEEecCCCCCCCCCCCCC
Q 009242 90 KQRKNSWQDGVLG----T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLM---HRAAGGYGGINIYQRPRIPIPYPIQDG 161 (539)
Q Consensus 90 ~~~~~~~~DG~~~----~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~---~~~~Gl~G~liV~~~~~~~~~~~~~~~ 161 (539)
.+.. .+.||.+. + ...|.|||+++..+++.+.+|.||.+++... ....|+..+++.........+.....
T Consensus 243 ~~~v-i~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~- 320 (521)
T 1v10_A 243 RMTV-IEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN- 320 (521)
T ss_dssp CEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-
T ss_pred eEEE-EecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-
Confidence 6543 45899743 2 5679999999999997555799999997541 22334434554433221111110000
Q ss_pred ceeEEeeeecccch-----------HHHHhhhcCCC-CCCCCceEEECCCCCc-------------------------eE
Q 009242 162 DFTLLIGDWFKTNH-----------KILRQTLDSGK-SLPFPDGVLINGQGHT-------------------------TF 204 (539)
Q Consensus 162 e~~l~l~d~~~~~~-----------~~~~~~~~~~~-~~~~~~~~liNG~~~~-------------------------~l 204 (539)
+. ..+.+..+... ......+.... .......|+|||+.+. .+
T Consensus 321 ~~-~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~ 399 (521)
T 1v10_A 321 SG-TALNEANLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVI 399 (521)
T ss_dssp CS-CBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEE
T ss_pred cc-cccchhhcccCCcccCCCcccCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEE
Confidence 00 00000000000 00000000000 0001126889999862 36
Q ss_pred EEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcc----ccceeeceEEE-cCCceEEEEEEeCCCCcceEEEEee
Q 009242 205 NGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSH----TIQNIYDSLDV-HVGQSVSVLVTLNQPPKDYYIVAST 279 (539)
Q Consensus 205 ~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~----~~p~~~d~l~l-~pg~R~dv~v~~~~~~g~~~~~~~~ 279 (539)
+++.|++++|+|+| ...|+||||||.|+|++.+|.. ..|...||+.| .||+++.+.++++ +||.|.+|||.
T Consensus 400 ~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi 475 (521)
T 1v10_A 400 SLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHI 475 (521)
T ss_dssp EECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESC
T ss_pred EecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeCh
Confidence 89999999999999 3467999999999999999875 35889999999 7999999999998 89999999996
Q ss_pred e
Q 009242 280 R 280 (539)
Q Consensus 280 ~ 280 (539)
.
T Consensus 476 ~ 476 (521)
T 1v10_A 476 D 476 (521)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.70 E-value=5.6e-16 Score=165.33 Aligned_cols=247 Identities=15% Similarity=0.149 Sum_probs=162.3
Q ss_pred EEEEEEEEEEeecCCCe-----eeEEEEECCCCC--------CceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCC
Q 009242 30 RFYTWTVTSGTLSPLGV-----PQEVILINGQFP--------GPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNS 95 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G~-----~~~~~~~nG~~p--------gP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~ 95 (539)
+++.|.+++.....++. ....+++||+.. .|+|+|++|+++++||.|.. .....+|++|..+.. .
T Consensus 142 ~e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i 220 (503)
T 1hfu_A 142 ENTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-I 220 (503)
T ss_dssp TTSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-E
T ss_pred ceEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-E
Confidence 35677777655443332 245789999853 29999999999999999998 456789999976543 4
Q ss_pred CCCCCcc----c-CCccCCCCeEEEEEEeCCCccceeEccCcch--h-----hccceeeEEEEecCCCCCCCCCCCCCce
Q 009242 96 WQDGVLG----T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLM--H-----RAAGGYGGINIYQRPRIPIPYPIQDGDF 163 (539)
Q Consensus 96 ~~DG~~~----~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--~-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 163 (539)
+.||.+. + ...|.|||+++..+++.+.+|.||.+++... + ...|+..+++.........|......+.
T Consensus 221 ~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~ 300 (503)
T 1hfu_A 221 EVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP 300 (503)
T ss_dssp EETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC
T ss_pred eccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc
Confidence 6899743 2 5568999999999997555799999987541 1 2234434444433221111110000000
Q ss_pred eEEeeeecccch--H---------HHHhhhcCCCCCCCCceEEECCCCCc-------------------------eEEEe
Q 009242 164 TLLIGDWFKTNH--K---------ILRQTLDSGKSLPFPDGVLINGQGHT-------------------------TFNGD 207 (539)
Q Consensus 164 ~l~l~d~~~~~~--~---------~~~~~~~~~~~~~~~~~~liNG~~~~-------------------------~l~v~ 207 (539)
..+.+..+... . .....+..... .....|+|||+.+. .++++
T Consensus 301 -~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~ 378 (503)
T 1hfu_A 301 -AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP 378 (503)
T ss_dssp -CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEEC
T ss_pred -CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEcc
Confidence 00001000000 0 00000000000 01126889999862 36899
Q ss_pred cCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcc----ccceeeceEEE-cCCceEEEEEEeCCCCcceEEEEeee
Q 009242 208 QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSH----TIQNIYDSLDV-HVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 208 ~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~----~~p~~~d~l~l-~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
.|++++++++|......|+||||||.|+|++.+|.. ..|..+||+.| .||+++.+.++++ +||.|.+|||..
T Consensus 379 ~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 379 RNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999954444567999999999999999875 25889999999 8999999999998 899999999964
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.64 E-value=4.3e-15 Score=157.48 Aligned_cols=230 Identities=14% Similarity=0.168 Sum_probs=150.9
Q ss_pred eeEEEEECCCC---------CCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCCCCCCCcc----c-CCccCCCC
Q 009242 47 PQEVILINGQF---------PGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGVLG----T-NCPIPPNS 111 (539)
Q Consensus 47 ~~~~~~~nG~~---------pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-~~~i~pG~ 111 (539)
....+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. -+.||.+. + ...|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 34679999963 347999999999999999987 466789999976443 56899743 2 55799999
Q ss_pred eEEEEEEeCCCccceeEccCcc---hhhccceeeEEEEecCCCCCCCCCCCCC-ceeEEeeeecccchH-----------
Q 009242 112 NYTYKFQTKDQIGSYFYFPSTL---MHRAAGGYGGINIYQRPRIPIPYPIQDG-DFTLLIGDWFKTNHK----------- 176 (539)
Q Consensus 112 ~~~y~~~~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~----------- 176 (539)
+++..+++.+..|.||.++... .....|...+++.........|...... ... .+.+..+..-.
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 9999999755569999998643 1122233334444432211111100000 000 00011100000
Q ss_pred HHHhhhcCCCCCCCCceEEECCCCCc-------------------------eEEEecCCEEEEEEEecCCCCeeeEEEeC
Q 009242 177 ILRQTLDSGKSLPFPDGVLINGQGHT-------------------------TFNGDQGKTYMFRISNVGLSTSFNFRIQG 231 (539)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~liNG~~~~-------------------------~l~v~~G~~~rlRliN~~~~~~~~~~l~g 231 (539)
..+..+..... .....|+|||+.+. .+.++.|++|+|.|.|......|+|||||
T Consensus 325 ~~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 00000000000 01236889998752 37899999999999843334467999999
Q ss_pred CeeEEEEecCccc----cceeeceEEEcC-CceEEEEEEeCCCCcceEEEEeee
Q 009242 232 HTMKLVEVEGSHT----IQNIYDSLDVHV-GQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 232 h~~~via~DG~~~----~p~~~d~l~l~p-g~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
|.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.+|||..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988653 688999999997 99999999999 899999999954
No 57
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.64 E-value=1.4e-14 Score=152.60 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=158.3
Q ss_pred EEEEEEEEEEeecCCCe-------------eeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCC
Q 009242 30 RFYTWTVTSGTLSPLGV-------------PQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNS 95 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G~-------------~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~ 95 (539)
++| |.+++.....+|. ....+++||+. .|+|.|++|+ ++|+.|.. .....+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 7777766555443 33578999996 6899999999 99999997 567899999986433 5
Q ss_pred CCCCC----cc-c-CCccCCCCeEEEEEEeCCCccceeEccCcchhh--------ccceeeEEEEecCCCCCCC------
Q 009242 96 WQDGV----LG-T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHR--------AAGGYGGINIYQRPRIPIP------ 155 (539)
Q Consensus 96 ~~DG~----~~-~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~--------~~Gl~G~liV~~~~~~~~~------ 155 (539)
+.||. |. + ...|.|||+++..+++ .+.|+|..-++..... ......-+-+... ..+.|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~~~ 333 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPKNLKIF 333 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCSCSCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCccccCC
Confidence 68974 22 2 5679999999999997 4578877665532110 0001111222211 11111
Q ss_pred --CCCCCCceeEEeeeecccchHHHHhhhcCCCCC---CCCceEEECCCCCc----eEEEecCCEEEEEEEecCCCCeee
Q 009242 156 --YPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSL---PFPDGVLINGQGHT----TFNGDQGKTYMFRISNVGLSTSFN 226 (539)
Q Consensus 156 --~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~liNG~~~~----~l~v~~G~~~rlRliN~~~~~~~~ 226 (539)
.+..+.+..+.++....+ ...+...+... .....++|||+.+. .++++.|++++|+|.|.+. ..|+
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp 408 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQ----MHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHP 408 (481)
T ss_dssp CCCCCCCEEEEEEEEECCST----TTTGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEE
T ss_pred CCCCCCCcEEEEEEeccchh----cccccccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-Ccee
Confidence 111122223333221100 00000000000 00125999999884 6899999999999999765 4679
Q ss_pred EEEeCCeeEEEEe--cCccc---cceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 227 FRIQGHTMKLVEV--EGSHT---IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 227 ~~l~gh~~~via~--DG~~~---~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
||||||.|+|++. +|... ++.++|++.|.||+++.|.++++ .||.|++|||..
T Consensus 409 ~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 409 FHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred EEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 9999999999999 99875 35679999999999999999998 899999999964
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.61 E-value=1.9e-14 Score=152.62 Aligned_cols=229 Identities=14% Similarity=0.164 Sum_probs=149.0
Q ss_pred eEEEEECCCC--------CCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCCCCCCCcc----c-CCccCCCCeE
Q 009242 48 QEVILINGQF--------PGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGVLG----T-NCPIPPNSNY 113 (539)
Q Consensus 48 ~~~~~~nG~~--------pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-~~~i~pG~~~ 113 (539)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. .+.||.+. + ...|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 347999999999999999987 456789999986543 56899743 2 4579999999
Q ss_pred EEEEEeCCCccceeEccCcc--h-hhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchH-----------HHH
Q 009242 114 TYKFQTKDQIGSYFYFPSTL--M-HRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHK-----------ILR 179 (539)
Q Consensus 114 ~y~~~~~~~~Gt~wYH~H~~--~-~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~-----------~~~ 179 (539)
+..+++.+..|.||..+... . ....+..-+++.........|........ ..+.+..+..-. ..+
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999755569999987643 1 11122222344333221111110000000 000111100000 000
Q ss_pred hhhcCCCCCCCCceEEECCCCCc-------------------------eEEEecCCEEEEEEEecC--CCCeeeEEEeCC
Q 009242 180 QTLDSGKSLPFPDGVLINGQGHT-------------------------TFNGDQGKTYMFRISNVG--LSTSFNFRIQGH 232 (539)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~~-------------------------~l~v~~G~~~rlRliN~~--~~~~~~~~l~gh 232 (539)
..+.... ......|+|||+.+. .+.++.|++|+|.|.|.+ ....|+||||||
T Consensus 324 ~~~~l~~-~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAF-NFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCE-EECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEE-EecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 0000000 001236889998752 378999999999999422 224579999999
Q ss_pred eeEEEEecCccc----cceeeceEEEcC---CceEEEEEEeCCCCcceEEEEeee
Q 009242 233 TMKLVEVEGSHT----IQNIYDSLDVHV---GQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 233 ~~~via~DG~~~----~p~~~d~l~l~p---g~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.+|||..
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 999999888653 688999999986 99999999999 899999999954
No 59
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.5e-14 Score=155.04 Aligned_cols=246 Identities=12% Similarity=0.127 Sum_probs=157.7
Q ss_pred eEEEEEEEEEEeec--------------CCC--eeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCCcCC
Q 009242 29 YRFYTWTVTSGTLS--------------PLG--VPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQ 91 (539)
Q Consensus 29 ~~~~~l~~~~~~~~--------------~~G--~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~ 91 (539)
.+++.|.+++.... ..| .....+++||+. .|+|+|++|+++++||.|.. .....+|++|..+
T Consensus 132 d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~ 210 (534)
T 1zpu_A 132 DEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEM 210 (534)
T ss_dssp SEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCE
T ss_pred cceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCee
Confidence 56778888775321 112 124578999996 69999999999999999997 4567899998755
Q ss_pred CCCCCCCCCcc----c-CCccCCCCeEEEEEEeCCC-ccceeEccCcchhhc------cceee-EEEEecCCC-CCCCCC
Q 009242 92 RKNSWQDGVLG----T-NCPIPPNSNYTYKFQTKDQ-IGSYFYFPSTLMHRA------AGGYG-GINIYQRPR-IPIPYP 157 (539)
Q Consensus 92 ~~~~~~DG~~~----~-~~~i~pG~~~~y~~~~~~~-~Gt~wYH~H~~~~~~------~Gl~G-~liV~~~~~-~~~~~~ 157 (539)
.. .+.||.+. + ...|.|||+++..+++.++ .|.||.......... ....+ +++...... .+.+..
T Consensus 211 ~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~ 289 (534)
T 1zpu_A 211 TV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY 289 (534)
T ss_dssp EE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC
T ss_pred EE-EeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc
Confidence 43 46899743 2 5679999999999997433 578999876542210 01122 233222111 011100
Q ss_pred CCCCceeEEeeeecccc----------hHHHHhhhcCCCCCCCCceEEECCCCCc-------------------------
Q 009242 158 IQDGDFTLLIGDWFKTN----------HKILRQTLDSGKSLPFPDGVLINGQGHT------------------------- 202 (539)
Q Consensus 158 ~~~~e~~l~l~d~~~~~----------~~~~~~~~~~~~~~~~~~~~liNG~~~~------------------------- 202 (539)
..++...+.|..... +..+.-.+...........++|||+.+.
T Consensus 290 --~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~ 367 (534)
T 1zpu_A 290 --VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGS 367 (534)
T ss_dssp --CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCS
T ss_pred --ccccccccccccceeCCCCCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCC
Confidence 000000000000000 0000000000000011236789998652
Q ss_pred ---eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCc-----------c---------ccceeeceEEEcCCce
Q 009242 203 ---TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGS-----------H---------TIQNIYDSLDVHVGQS 259 (539)
Q Consensus 203 ---~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~-----------~---------~~p~~~d~l~l~pg~R 259 (539)
.+.++.|++++|.|.|.+.. .|+||||||.|+|++.++. + ..|...||+.+.||+.
T Consensus 368 ~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~ 446 (534)
T 1zpu_A 368 NTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSN 446 (534)
T ss_dssp SSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCE
T ss_pred CceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCE
Confidence 47899999999999998764 5799999999999999853 1 2477899999999999
Q ss_pred EEEEEEeCCCCcceEEEEeee
Q 009242 260 VSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 260 ~dv~v~~~~~~g~~~~~~~~~ 280 (539)
+.+.++++ +||.|.+|||..
T Consensus 447 v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 447 FVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp EEEEEECC-SCEEEEEEECCH
T ss_pred EEEEEEeC-CCeeEEEEeCch
Confidence 99999998 899999999964
No 60
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.60 E-value=2.3e-16 Score=131.79 Aligned_cols=90 Identities=21% Similarity=0.324 Sum_probs=70.0
Q ss_pred CCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCC--CCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCc
Q 009242 55 GQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKN--SWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPST 132 (539)
Q Consensus 55 G~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 132 (539)
-++++|+|++++||+|+ ++|.....+++||||..+... ..+||.+..+..|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 35678999999999974 679988999999999865320 0122221114689999999999986467999999999
Q ss_pred chhhccceeeEEEEec
Q 009242 133 LMHRAAGGYGGINIYQ 148 (539)
Q Consensus 133 ~~~~~~Gl~G~liV~~ 148 (539)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 566889999999974
No 61
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.60 E-value=3.2e-14 Score=153.52 Aligned_cols=202 Identities=12% Similarity=0.115 Sum_probs=136.0
Q ss_pred eEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCCCCCCCcc----c-CCccCCCCeEEEEEEe-CCCccceeEccCcc
Q 009242 61 RLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGVLG----T-NCPIPPNSNYTYKFQT-KDQIGSYFYFPSTL 133 (539)
Q Consensus 61 ~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-~~~i~pG~~~~y~~~~-~~~~Gt~wYH~H~~ 133 (539)
+|+|++|+++++||.|.. .....+|++|..+.. .+.||.+. + ...|.|||+++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 899999999999999997 456789999976543 45899643 2 5679999999999997 34489999998865
Q ss_pred hhhccc--eeeEEEEecCCC--CC---CC-CC--------------------------CCCCceeEEeeeecccchHHHH
Q 009242 134 MHRAAG--GYGGINIYQRPR--IP---IP-YP--------------------------IQDGDFTLLIGDWFKTNHKILR 179 (539)
Q Consensus 134 ~~~~~G--l~G~liV~~~~~--~~---~~-~~--------------------------~~~~e~~l~l~d~~~~~~~~~~ 179 (539)
...... ..+.|-...... .+ .+ .+ ..++.+.+.+..-.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-------- 355 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV-------- 355 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE--------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeecc--------
Confidence 210111 123333322211 00 00 00 00111111110000
Q ss_pred hhhcCCCCCCCCceEEECCCCC-----------------------------------------------ceEEEecCCEE
Q 009242 180 QTLDSGKSLPFPDGVLINGQGH-----------------------------------------------TTFNGDQGKTY 212 (539)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~-----------------------------------------------~~l~v~~G~~~ 212 (539)
......++|||+.+ ..+.++.|+++
T Consensus 356 --------~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v 427 (552)
T 1aoz_A 356 --------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427 (552)
T ss_dssp --------ETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEE
T ss_pred --------CCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEE
Confidence 00011345555421 13788999999
Q ss_pred EEEEEecCCC-----CeeeEEEeCCeeEEEEec-Ccc----------ccceeeceEEEcCCceEEEEEEeCCCCcceEEE
Q 009242 213 MFRISNVGLS-----TSFNFRIQGHTMKLVEVE-GSH----------TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIV 276 (539)
Q Consensus 213 rlRliN~~~~-----~~~~~~l~gh~~~via~D-G~~----------~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~ 276 (539)
+|.|.|.+.. ..|+||||||.|+|++.. |.+ ..|...||+.|.||+.+.+.++++ +||.|.+|
T Consensus 428 ~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~H 506 (552)
T 1aoz_A 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFH 506 (552)
T ss_dssp EEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEE
T ss_pred EEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEE
Confidence 9999998753 358999999999999984 553 257889999999999999999998 89999999
Q ss_pred Eeee
Q 009242 277 ASTR 280 (539)
Q Consensus 277 ~~~~ 280 (539)
||-.
T Consensus 507 CHi~ 510 (552)
T 1aoz_A 507 CHIE 510 (552)
T ss_dssp ESSH
T ss_pred eeeh
Confidence 9965
No 62
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.58 E-value=5.7e-14 Score=151.55 Aligned_cols=230 Identities=10% Similarity=0.046 Sum_probs=146.1
Q ss_pred eEEEEECCCCC--------CceEEEEcCCEEEEEEEECC-CCCceeeeCCcCCCCCCCCCCCcc----c-CCccCCCCeE
Q 009242 48 QEVILINGQFP--------GPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGVLG----T-NCPIPPNSNY 113 (539)
Q Consensus 48 ~~~~~~nG~~p--------gP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-~~~i~pG~~~ 113 (539)
...+++||+.. -|+|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999973 37999999999999999998 456789999976543 45799753 2 5679999999
Q ss_pred EEEEEeCCCccceeEccCc--chhh--c-cc-eeeEEEEecCCCCCCCCCC----CC----CceeEE-eeeecccch---
Q 009242 114 TYKFQTKDQIGSYFYFPST--LMHR--A-AG-GYGGINIYQRPRIPIPYPI----QD----GDFTLL-IGDWFKTNH--- 175 (539)
Q Consensus 114 ~y~~~~~~~~Gt~wYH~H~--~~~~--~-~G-l~G~liV~~~~~~~~~~~~----~~----~e~~l~-l~d~~~~~~--- 175 (539)
+..+++.+.+|.||..... .... . .. ..+.|-..... ...|... .+ .+..+. +........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~-~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP-GGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC-CSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCC-CCCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999975557899988765 2110 1 11 12233232211 1111100 00 000000 000000000
Q ss_pred H--HHHhhhcCCCCCCCCceEEECCCCCc-----------------------eEEEecCCEEEEEEEecCC----CCeee
Q 009242 176 K--ILRQTLDSGKSLPFPDGVLINGQGHT-----------------------TFNGDQGKTYMFRISNVGL----STSFN 226 (539)
Q Consensus 176 ~--~~~~~~~~~~~~~~~~~~liNG~~~~-----------------------~l~v~~G~~~rlRliN~~~----~~~~~ 226 (539)
. ...-.+...........++|||+.+. .+.++.++.+++.++|... ...|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 0 00000000000112347899999762 2667777777766776644 45789
Q ss_pred EEEeCCeeEEEEecC---------cc------------ccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 227 FRIQGHTMKLVEVEG---------SH------------TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 227 ~~l~gh~~~via~DG---------~~------------~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
||||||.|+|++.++ .. ..|..+||+.|.+++++.+.++++ +||.|.+|||..
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 999999999999986 22 146789999999999999999998 899999999965
No 63
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.57 E-value=7.6e-15 Score=144.37 Aligned_cols=110 Identities=17% Similarity=0.275 Sum_probs=90.3
Q ss_pred CeEEEEEEEEEEeecCCCeeeEEEEECCCC--CCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc----
Q 009242 28 PYRFYTWTVTSGTLSPLGVPQEVILINGQF--PGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL---- 101 (539)
Q Consensus 28 ~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~--pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~---- 101 (539)
+.++|.|... -|++||+. ++|.|++++||+|+++|.|.....+++||||...... .||..
T Consensus 146 ~drE~~l~l~------------~~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~ 211 (276)
T 3kw8_A 146 PDATHTIVFN------------DMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPD 211 (276)
T ss_dssp CSEEEEEEEE------------TTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTT
T ss_pred cccceEEEec------------ccccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCc
Confidence 3577776543 26999998 8999999999999999999998999999999765432 34431
Q ss_pred ---c-c-CCccCCCCeEEEEEEeCC--CccceeEccCcchhhccceeeEEEEecCCC
Q 009242 102 ---G-T-NCPIPPNSNYTYKFQTKD--QIGSYFYFPSTLMHRAAGGYGGINIYQRPR 151 (539)
Q Consensus 102 ---~-~-~~~i~pG~~~~y~~~~~~--~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 151 (539)
. . ...|.||++++|.|.+.. .+|+||||||...|...||.|.|+|++++.
T Consensus 212 ~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 212 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp CCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 1 2 466999999999999632 599999999999999999999999998754
No 64
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.56 E-value=9.8e-14 Score=146.17 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=156.0
Q ss_pred EEEEEEEEEEeecCCC--------------eeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeee-CCcCCCC
Q 009242 30 RFYTWTVTSGTLSPLG--------------VPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTW-NGIKQRK 93 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G--------------~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~-HG~~~~~ 93 (539)
.++.|.+++.....+| .....+++||+. .|.+.+ +|+++++||.|.. .....+++ +|..+..
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4777888876654443 233578999995 588876 6789999999997 45678888 6764332
Q ss_pred CCCCCCCc----c-c-CCccCCCCeEEEEEEeCCCccceeEccCcchhh------ccceeeEEEEec---CCCCCCCC--
Q 009242 94 NSWQDGVL----G-T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHR------AAGGYGGINIYQ---RPRIPIPY-- 156 (539)
Q Consensus 94 ~~~~DG~~----~-~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~------~~Gl~G~liV~~---~~~~~~~~-- 156 (539)
...||.+ . + ...|.|||+++..+++. +.++|+.-+...... ...-.-.+-|.+ ++....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 5689953 2 2 56799999999999974 567777655422110 000001122221 01111111
Q ss_pred ---C---C----CCCceeEEeeeecccch--HHHHh-----hhc------------CCCCC--------CCCceEEECCC
Q 009242 157 ---P---I----QDGDFTLLIGDWFKTNH--KILRQ-----TLD------------SGKSL--------PFPDGVLINGQ 199 (539)
Q Consensus 157 ---~---~----~~~e~~l~l~d~~~~~~--~~~~~-----~~~------------~~~~~--------~~~~~~liNG~ 199 (539)
+ . ..+++.+.+... .+.. ..+.. .+. .|... .....++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 0 0 112333333210 0000 00000 000 01000 00124799999
Q ss_pred CCc----eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccc---eeeceEEEcCCceEEEEEEeCC---C
Q 009242 200 GHT----TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ---NIYDSLDVHVGQSVSVLVTLNQ---P 269 (539)
Q Consensus 200 ~~~----~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p---~~~d~l~l~pg~R~dv~v~~~~---~ 269 (539)
.+. .++++.|++++|+|+|.+....|+||||||.|+|++.||....+ .++|++.|. |+++.|+|++++ .
T Consensus 386 ~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 386 AFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp CCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred eCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 874 58999999999999999966678999999999999999987643 478999999 999999999974 3
Q ss_pred CcceEEEEeee
Q 009242 270 PKDYYIVASTR 280 (539)
Q Consensus 270 ~g~~~~~~~~~ 280 (539)
+|.|++|||..
T Consensus 465 ~G~~m~HCH~l 475 (488)
T 3od3_A 465 EHAYMAHCHLL 475 (488)
T ss_dssp GGCEEEEESSH
T ss_pred CCCEEEeCCch
Confidence 68999999964
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.54 E-value=2.1e-13 Score=143.21 Aligned_cols=224 Identities=13% Similarity=0.141 Sum_probs=151.3
Q ss_pred EEEEEEEEEEeecC-------------CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeee--CC---cC
Q 009242 30 RFYTWTVTSGTLSP-------------LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTW--NG---IK 90 (539)
Q Consensus 30 ~~~~l~~~~~~~~~-------------~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~--HG---~~ 90 (539)
+++.|.+++..... .|.....+++||+. .|+|+|++| ++++|+.|.. .....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 67777777654432 12234578999996 699999999 9999999998 45678999 87 54
Q ss_pred CCCCCCCCCCcc-----c-CCccCCCCeEEEEEEeCCCccceeEccCcchhhc------------cc-eeeE--EEEecC
Q 009242 91 QRKNSWQDGVLG-----T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRA------------AG-GYGG--INIYQR 149 (539)
Q Consensus 91 ~~~~~~~DG~~~-----~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~------------~G-l~G~--liV~~~ 149 (539)
+.. -+.||.+. + ...|.|||+++..++++ .+.||..++...... .+ .... |.+...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 45899642 2 56799999999999974 478898876432100 00 1111 222221
Q ss_pred CCCCCC--CCC-------CCCceeEEeeeecccchHHHHhhhcCCCCCCCCceEEECCCCCc----eEE-EecCCEEEEE
Q 009242 150 PRIPIP--YPI-------QDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHT----TFN-GDQGKTYMFR 215 (539)
Q Consensus 150 ~~~~~~--~~~-------~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~----~l~-v~~G~~~rlR 215 (539)
...+.| ... ...+..+.+. .+ ...|+|||+.+. .+. ++.|++++|+
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~---------------~~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~ 352 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALS---------------LS-----GMQWTINGMFWNASNPLFEHVSVEGVELWE 352 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEE---------------EE-----TTEEEETTBCCCTTCTTCCCEEECEEEEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEe---------------CC-----CceeeECCCcCCCCCCceeccCCCCeEEEE
Confidence 111000 000 0001111110 00 125899999874 467 9999999999
Q ss_pred EEecCCCCeeeEEEeCCeeEEEEecCccc------------cc---eeeceEEEcCCceEEEEEEeC---C-CCcceEEE
Q 009242 216 ISNVGLSTSFNFRIQGHTMKLVEVEGSHT------------IQ---NIYDSLDVHVGQSVSVLVTLN---Q-PPKDYYIV 276 (539)
Q Consensus 216 liN~~~~~~~~~~l~gh~~~via~DG~~~------------~p---~~~d~l~l~pg~R~dv~v~~~---~-~~g~~~~~ 276 (539)
|.|.+....|+||||||.|+|++.+|... .| ..+||+.+.||+++.+.+++. . .| |.+|
T Consensus 353 i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~H 430 (448)
T 3aw5_A 353 IVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFH 430 (448)
T ss_dssp EEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEE
T ss_pred EEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEE
Confidence 99998445679999999999999999764 23 579999999999999997764 2 45 9999
Q ss_pred Eeee
Q 009242 277 ASTR 280 (539)
Q Consensus 277 ~~~~ 280 (539)
||..
T Consensus 431 CHil 434 (448)
T 3aw5_A 431 CHNL 434 (448)
T ss_dssp ESSH
T ss_pred cCCh
Confidence 9964
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.51 E-value=1.3e-12 Score=141.07 Aligned_cols=226 Identities=11% Similarity=0.050 Sum_probs=144.0
Q ss_pred EEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCCc-------CCCCCCCCCCCcc----c-C-------CccC
Q 009242 49 EVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGI-------KQRKNSWQDGVLG----T-N-------CPIP 108 (539)
Q Consensus 49 ~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~-------~~~~~~~~DG~~~----~-~-------~~i~ 108 (539)
..+++||+. .|.|.|++| ++++||.|.. .....+++.|. .+. -...||.+. . + ..|.
T Consensus 255 d~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~ 331 (612)
T 2g23_A 255 PYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp SEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred CEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEEC
Confidence 568999995 799999999 9999999997 56778888775 111 135799643 1 3 4589
Q ss_pred CCCeEEEEEEeCCCcc-ceeEccCcchhh------c----cceeeEEEEecCC-CCC--CCCCC------CCCc-----e
Q 009242 109 PNSNYTYKFQTKDQIG-SYFYFPSTLMHR------A----AGGYGGINIYQRP-RIP--IPYPI------QDGD-----F 163 (539)
Q Consensus 109 pG~~~~y~~~~~~~~G-t~wYH~H~~~~~------~----~Gl~G~liV~~~~-~~~--~~~~~------~~~e-----~ 163 (539)
|||+++.-+++.+.+| +++...-..... . .+..--|.|.... .+. .|... ...+ .
T Consensus 332 pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r 411 (612)
T 2g23_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHR 411 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEE
T ss_pred CcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccccee
Confidence 9999999999855466 466654421100 0 0111224454332 111 11110 0000 1
Q ss_pred eEEee------------eecccc---hHHHHhhhc-CC-----CCCCCCceEEECCCCCc---eEEEecCCEEEEEEEec
Q 009242 164 TLLIG------------DWFKTN---HKILRQTLD-SG-----KSLPFPDGVLINGQGHT---TFNGDQGKTYMFRISNV 219 (539)
Q Consensus 164 ~l~l~------------d~~~~~---~~~~~~~~~-~~-----~~~~~~~~~liNG~~~~---~l~v~~G~~~rlRliN~ 219 (539)
.+++. -|.... ...+ .+. .+ ........++|||+.+. .++++.|++++|+|+|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~ 489 (612)
T 2g23_A 412 LIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFNDGLGFTIGEGTHEQWTFLNL 489 (612)
T ss_dssp EEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEEC
T ss_pred EEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCCCCCceEecCCCEEEEEEEeC
Confidence 11110 011100 0000 000 00 00011236899999874 79999999999999999
Q ss_pred CCCCeeeEEEeCCeeEEEEecCc------------------------cc---cceeeceEEEcCCceEEEEEEeCCCCcc
Q 009242 220 GLSTSFNFRIQGHTMKLVEVEGS------------------------HT---IQNIYDSLDVHVGQSVSVLVTLNQPPKD 272 (539)
Q Consensus 220 ~~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~l~l~pg~R~dv~v~~~~~~g~ 272 (539)
+.. .|+||||||.|+|++.+|. .. ++.++|++.|.||+++.|.++++..+|.
T Consensus 490 ~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~ 568 (612)
T 2g23_A 490 SPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGR 568 (612)
T ss_dssp SSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEE
T ss_pred CCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCcc
Confidence 864 5799999999999987542 11 2337899999999999999999867999
Q ss_pred eEEEEeee
Q 009242 273 YYIVASTR 280 (539)
Q Consensus 273 ~~~~~~~~ 280 (539)
|++|||..
T Consensus 569 w~~HCHil 576 (612)
T 2g23_A 569 FMYHCHLL 576 (612)
T ss_dssp EEEEESSH
T ss_pred EEEEeCch
Confidence 99999965
No 67
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.46 E-value=2.1e-13 Score=115.16 Aligned_cols=105 Identities=17% Similarity=0.128 Sum_probs=79.4
Q ss_pred EEEEEEEEEEeec-----CCCeeeEE-EEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc
Q 009242 30 RFYTWTVTSGTLS-----PLGVPQEV-ILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT 103 (539)
Q Consensus 30 ~~~~l~~~~~~~~-----~~G~~~~~-~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 103 (539)
+.|++.+.+.... .+|..... ..||+++++|.|++++||+|+++++|.....+++...+. |.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAF---------GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGG---------TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCCeEEEEEcCC---------Cc---
Confidence 4566666665432 34666555 489999999999999999999999999765433333321 22
Q ss_pred CCccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEec
Q 009242 104 NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQ 148 (539)
Q Consensus 104 ~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 148 (539)
+..+.||++++|.|++ +++|+||||||.+.+... |.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 3679999999999995 789999999998865443 999999974
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.46 E-value=8.6e-13 Score=141.23 Aligned_cols=241 Identities=15% Similarity=0.061 Sum_probs=148.8
Q ss_pred EEEEEEEEEEeecCCC-----------eeeEEEEECCCCCCceEEEEcCCEEEEEEEECC-CCCceeeeCC-------cC
Q 009242 30 RFYTWTVTSGTLSPLG-----------VPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNG-------IK 90 (539)
Q Consensus 30 ~~~~l~~~~~~~~~~G-----------~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG-------~~ 90 (539)
+++.|.+++.....+| .....+++||+. .|.|.|+.| ++++||.|.. .....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 4456666665443333 224578999994 799999985 9999999998 4566899976 32
Q ss_pred CCCCCCCCCC----cc-c-CCccCCCCeEEEEEEeCCCcc-ceeEccCcchhh-------ccceeeEEEEecCCCCCCCC
Q 009242 91 QRKNSWQDGV----LG-T-NCPIPPNSNYTYKFQTKDQIG-SYFYFPSTLMHR-------AAGGYGGINIYQRPRIPIPY 156 (539)
Q Consensus 91 ~~~~~~~DG~----~~-~-~~~i~pG~~~~y~~~~~~~~G-t~wYH~H~~~~~-------~~Gl~G~liV~~~~~~~~~~ 156 (539)
+. --..||. |. + ...|.|||+++..+++.+.+| +||......... .....+.+-+........+.
T Consensus 250 ~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22 2457985 22 2 567999999999999755467 688765321000 00011222222111000000
Q ss_pred CCCCCceeEEeeeec-ccchHHHHhhhcCCCCCCCCceEEECCCCCc------eEEEecCCEEEEEEEecCCCCeeeEEE
Q 009242 157 PIQDGDFTLLIGDWF-KTNHKILRQTLDSGKSLPFPDGVLINGQGHT------TFNGDQGKTYMFRISNVGLSTSFNFRI 229 (539)
Q Consensus 157 ~~~~~e~~l~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~------~l~v~~G~~~rlRliN~~~~~~~~~~l 229 (539)
....+-.+.... ..........+.-+ .....|+|||+.+. .+.++.|++++|.|.|.+....|+|||
T Consensus 329 ---~~~~P~~L~~~~~p~~~~~~~~~~~~~---~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HL 402 (534)
T 3abg_A 329 ---TSVVPANLRDVPFPSPTTNTPRQFRFG---RTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHI 402 (534)
T ss_dssp ---CCCCCCCCCCCSCCCCCCCCCEEEECS---CCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEE
T ss_pred ---CCCCccccccCCCCCCccccceEEEEe---ccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEE
Confidence 000000000000 00000000000000 01235789999874 357999999999999988655789999
Q ss_pred eCCeeEEEEe-cCc---cc---cceeeceEEEcCCceEEEEEE-eCCCCcceEEEEeee
Q 009242 230 QGHTMKLVEV-EGS---HT---IQNIYDSLDVHVGQSVSVLVT-LNQPPKDYYIVASTR 280 (539)
Q Consensus 230 ~gh~~~via~-DG~---~~---~p~~~d~l~l~pg~R~dv~v~-~~~~~g~~~~~~~~~ 280 (539)
|||.|+|++. +|. .. +...+||+.|.||+++.|.+. ++ +||.|.+|||..
T Consensus 403 HG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~ad-npG~w~~HCHil 460 (534)
T 3abg_A 403 HLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAP-FPGVYMFHCHNL 460 (534)
T ss_dssp SSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCS-CCEEEEEEESCH
T ss_pred CCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECC-CCccEEEecChH
Confidence 9999999998 663 11 125689999999999999998 55 899999999965
No 69
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.46 E-value=2.9e-13 Score=144.72 Aligned_cols=221 Identities=15% Similarity=0.114 Sum_probs=139.1
Q ss_pred eEEEEECCCCCCceEEEEcCCEEEEEEEECCC-CCceeeeCCc-CCCCCCCCCCCc----c-c-CCccCCCCeEEEEEEe
Q 009242 48 QEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGI-KQRKNSWQDGVL----G-T-NCPIPPNSNYTYKFQT 119 (539)
Q Consensus 48 ~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~-~~~~~~~~DG~~----~-~-~~~i~pG~~~~y~~~~ 119 (539)
...+++||+. .|.|.|+.| ++++|+.|... ....+|+.|. .+. --+.||.+ . + ...|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4578999996 799999885 99999999984 4678999886 333 24689953 2 2 5679999999999997
Q ss_pred CCCccceeE-ccCcc--hhhccce-eeEEEEecCC--C----CCCCCCCCCCce-eE--EeeeecccchHHHHhhhcCCC
Q 009242 120 KDQIGSYFY-FPSTL--MHRAAGG-YGGINIYQRP--R----IPIPYPIQDGDF-TL--LIGDWFKTNHKILRQTLDSGK 186 (539)
Q Consensus 120 ~~~~Gt~wY-H~H~~--~~~~~Gl-~G~liV~~~~--~----~~~~~~~~~~e~-~l--~l~d~~~~~~~~~~~~~~~~~ 186 (539)
.+.+|.++. ..-.. ....... ...+-..... . ...|......+. .+ ...+... . +....
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~----~----l~~~~ 378 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTL----K----LAGTQ 378 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEE----E----EEEEE
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEE----E----EEeec
Confidence 544676322 11110 0000001 1122222111 0 001110000000 00 0000000 0 00000
Q ss_pred CCCCCceEEECCCCCc---eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcc--------------------
Q 009242 187 SLPFPDGVLINGQGHT---TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSH-------------------- 243 (539)
Q Consensus 187 ~~~~~~~~liNG~~~~---~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~-------------------- 243 (539)
.......++|||+.+. .+.++.|++++|.|.|.+.. .|+||||||.|+|++.++..
T Consensus 379 ~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (513)
T 2wsd_A 379 DEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPP 457 (513)
T ss_dssp CTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCC
T ss_pred CCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccccccccccccccCCCCCCC
Confidence 0001125789999874 56889999999999998864 67999999999999987621
Q ss_pred -ccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 244 -TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 244 -~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
-++.++|++.|.||+++.+.++++..||.|.+|||..
T Consensus 458 ~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 458 PSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp GGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred ccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 1234799999999999999999954799999999965
No 70
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.42 E-value=6e-13 Score=118.50 Aligned_cols=98 Identities=17% Similarity=0.253 Sum_probs=71.0
Q ss_pred CeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCC------CCccc--CCccCCCC--eEE
Q 009242 45 GVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQD------GVLGT--NCPIPPNS--NYT 114 (539)
Q Consensus 45 G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~D------G~~~~--~~~i~pG~--~~~ 114 (539)
|...+.+..+|. ++|+|+|++||+|+|+++|... ...|.+.+...+..+.+ ..++. ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 344444455666 5799999999999999999732 34566665543333221 11111 12789999 999
Q ss_pred EEEEeCCCccceeEccCcchhhccceeeEEEEe
Q 009242 115 YKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 115 y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99995 79999999999889999999999985
No 71
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.41 E-value=7.6e-13 Score=133.94 Aligned_cols=104 Identities=16% Similarity=0.259 Sum_probs=84.6
Q ss_pred EEECCCC--CCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCC---c----c-c-CCccCCCCeEEEEEEe
Q 009242 51 ILINGQF--PGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV---L----G-T-NCPIPPNSNYTYKFQT 119 (539)
Q Consensus 51 ~~~nG~~--pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~---~----~-~-~~~i~pG~~~~y~~~~ 119 (539)
|++||+. ..|.|++++||+|+|++.|.....+.+|+||...... .+|. | . . ...|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864322 2332 1 1 1 3569999999999996
Q ss_pred --CCCccceeEccCcchhhccceeeEEEEecCCCCCCCC
Q 009242 120 --KDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPY 156 (539)
Q Consensus 120 --~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~ 156 (539)
++++|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 3579999999999999999999999999866443333
No 72
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.39 E-value=1.5e-11 Score=132.08 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=144.0
Q ss_pred eEEEEECCCCC----------------CceEEEEcCCEEEEEEEECCC-CCceeeeCCcCCCCCCCCCCCcc----c-CC
Q 009242 48 QEVILINGQFP----------------GPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQDGVLG----T-NC 105 (539)
Q Consensus 48 ~~~~~~nG~~p----------------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-~~ 105 (539)
....++||+.. .++|+|++|+++++||.|... ....+|++|..+.. -+.||.+. + ..
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999742 379999999999999999974 56689999986543 46899753 2 56
Q ss_pred ccCCCCeEEEEEEeCCCccceeEccCcchh----hccceeeEEEEecCCCCCCCCCCCCCcee-EEeee--ecccch---
Q 009242 106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLMH----RAAGGYGGINIYQRPRIPIPYPIQDGDFT-LLIGD--WFKTNH--- 175 (539)
Q Consensus 106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~-l~l~d--~~~~~~--- 175 (539)
.|.|||+++..+++.+..|.||........ ...+..-+++.........|... ..+.. ..+.+ ..+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~-~~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSV-GTTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCC-CCCCCCCSCCSCGGGCCBSSCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCC-CCCccchhhcccccccccCCCC
Confidence 799999999999986568999999875421 11112223344332211111100 00000 00000 000000
Q ss_pred -----HHHHhhhcCCCCCCCCceEEECCCCCc-----------------------eEEE----ecCCEEEEEEEecC--C
Q 009242 176 -----KILRQTLDSGKSLPFPDGVLINGQGHT-----------------------TFNG----DQGKTYMFRISNVG--L 221 (539)
Q Consensus 176 -----~~~~~~~~~~~~~~~~~~~liNG~~~~-----------------------~l~v----~~G~~~rlRliN~~--~ 221 (539)
......+..+ ......+.|||..+. .+.+ +.|++|.|.|-|.+ .
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 0000000000 011235677887641 1333 35999999999987 4
Q ss_pred CCeeeEEEeCCeeEEEEecCc------------cccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 222 STSFNFRIQGHTMKLVEVEGS------------HTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 222 ~~~~~~~l~gh~~~via~DG~------------~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
..|+||||||.|+|++.+.+ +..|...|++.+.|++.+.+.++++ +||.|.+|||..
T Consensus 461 -~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 461 -IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp -CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred -cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 46799999999999998432 1357889999999999999999999 899999999954
No 73
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=6.7e-12 Score=133.71 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=73.9
Q ss_pred CCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCc
Q 009242 44 LGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQI 123 (539)
Q Consensus 44 ~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~ 123 (539)
++.+..+|++|+++|+|+|+|++||+|+++++|....... +||+.+.. .|+ ...+.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4577889999999999999999999999999998643111 34543321 222 3679999999999996 789
Q ss_pred cceeEccCcc-hhhccceeeEEEEecC
Q 009242 124 GSYFYFPSTL-MHRAAGGYGGINIYQR 149 (539)
Q Consensus 124 Gt~wYH~H~~-~~~~~Gl~G~liV~~~ 149 (539)
|+||||||.. .....||+|.|+|+++
T Consensus 567 GtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 9999999942 1111399999999875
No 74
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.27 E-value=1.6e-10 Score=126.62 Aligned_cols=89 Identities=9% Similarity=0.036 Sum_probs=74.5
Q ss_pred ceEEECCCCCc---eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccc------------------------
Q 009242 192 DGVLINGQGHT---TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT------------------------ 244 (539)
Q Consensus 192 ~~~liNG~~~~---~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~------------------------ 244 (539)
..+.+||+.+. .+.++.|++++|.|.|.+.. .|+||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 46788888765 68899999999999999875 569999999999999876421
Q ss_pred ---cceeeceEEEcCCceEEEEEEeCCCCcceEEEEeeec
Q 009242 245 ---IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRF 281 (539)
Q Consensus 245 ---~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~~ 281 (539)
++..+||+.+.+|+.+.|.+++..+||.|.+|||...
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~ 577 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLE 577 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChH
Confidence 1235899999999999999996558999999999653
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.25 E-value=3.2e-11 Score=100.28 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=62.7
Q ss_pred CCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-CCccCCCCeEEEEEEeCCCccceeEccCc
Q 009242 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-NCPIPPNSNYTYKFQTKDQIGSYFYFPST 132 (539)
Q Consensus 54 nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 132 (539)
+..+..+.|++++||+|+ ++|.....+++|+++. .||.... +..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445567899999999965 5699888999999862 2565444 55689999999988 369999999998
Q ss_pred chhhccceeeEEEEe
Q 009242 133 LMHRAAGGYGGINIY 147 (539)
Q Consensus 133 ~~~~~~Gl~G~liV~ 147 (539)
|. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 65 899999985
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.18 E-value=3e-11 Score=100.45 Aligned_cols=86 Identities=15% Similarity=0.047 Sum_probs=67.3
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEe-CCce
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQG 489 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a-dnpG 489 (539)
..+.++.|+.|+| .|.+...|+||+|+..|... + +. .. +...+++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~--~-g~----~~------~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA--S-KE----LA------DKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG--C-HH----HH------HHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc--c-cc----cc------ccccccccccCCCCeEEEEEecCCCCe
Confidence 4578999999876 58888899999999876431 0 00 00 0112588999999999999998 7899
Q ss_pred eeEEEeechhhhhcccEEEEEEec
Q 009242 490 MWNMRSAIWERQYLGQQFYLKVWN 513 (539)
Q Consensus 490 ~w~~HCHil~H~d~GMm~~~~V~~ 513 (539)
.|.|||| .|...||+..+.|.+
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEECC
T ss_pred eEEEEeC--CchhcCCEEEEEEcC
Confidence 9999999 699999999999854
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.18 E-value=3e-11 Score=105.97 Aligned_cols=94 Identities=11% Similarity=0.034 Sum_probs=72.4
Q ss_pred EEEecCCcEEEEEEEcCCCC-CCceeecCCceEEEe-------ecc--CcCCcccccccCCCCCCcceEEEeCCCcEEEE
Q 009242 412 VMQVNLHEYIEVVFQNNEKT-MQSWHLDGYDFWVVG-------YGS--GQWAAEKRRTYNLADTLTRHTAQVYPQSWTVI 481 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~-~HP~HlHG~~F~Vl~-------~~~--g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 481 (539)
.+.++.|++|+|++.|.+.+ .|.||+|+....+.. ... ..+.+. -....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEE
Confidence 47789999999999999888 899999986531110 000 011110 01235789999999999999
Q ss_pred EEEeCCceeeEEEeechhhhhcccEEEEEEe
Q 009242 482 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|.+++||.|.||||+..|.. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999883
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.12 E-value=1.7e-10 Score=96.07 Aligned_cols=83 Identities=18% Similarity=0.326 Sum_probs=63.1
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc----cc-CCccCCCCeEEEEEEeCCCccceeEccCcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL----GT-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTL 133 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~ 133 (539)
.+.|++++||+|+ ++|.....+++|+|+.... ..+|.. .. ...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~--~~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVE--FLNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEE--EEECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 4799999999965 5588777899999885331 123320 01 2468999999999985467999999999
Q ss_pred hhhccceeeEEEEec
Q 009242 134 MHRAAGGYGGINIYQ 148 (539)
Q Consensus 134 ~~~~~Gl~G~liV~~ 148 (539)
.|..+||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.99 E-value=2e-09 Score=94.20 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=67.1
Q ss_pred CCCCceEEEEcCCEEEEEEEECCCC-CceeeeCCcCCC------------C---CCCCCCCc-cc--CCccCCCCeEEEE
Q 009242 56 QFPGPRLDVVTNDNIILNVINKLDQ-PFLLTWNGIKQR------------K---NSWQDGVL-GT--NCPIPPNSNYTYK 116 (539)
Q Consensus 56 ~~pgP~i~v~~Gd~v~i~~~N~l~~-~~~iH~HG~~~~------------~---~~~~DG~~-~~--~~~i~pG~~~~y~ 116 (539)
.|--+.|+|++||+|+++|+|.... .++++.|+.... + ....++.+ .. ...|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4445789999999999999999777 889988874210 0 00001111 11 2458999999999
Q ss_pred EEeCCCccceeEccCcchhhccceeeEEEEe
Q 009242 117 FQTKDQIGSYFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 117 ~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
|++ +++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 996 57999999999988888 999999984
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.92 E-value=1.2e-08 Score=89.45 Aligned_cols=91 Identities=18% Similarity=0.172 Sum_probs=66.9
Q ss_pred CCCceEEEEcCCEEEEEEEE--CCCCCceeeeCCcC------------CC----CCCCCCCCccc--CCccCCCCeEEEE
Q 009242 57 FPGPRLDVVTNDNIILNVIN--KLDQPFLLTWNGIK------------QR----KNSWQDGVLGT--NCPIPPNSNYTYK 116 (539)
Q Consensus 57 ~pgP~i~v~~Gd~v~i~~~N--~l~~~~~iH~HG~~------------~~----~~~~~DG~~~~--~~~i~pG~~~~y~ 116 (539)
|-.+.|+|++||+|+++++| .....++++.+... .. --+..|..... ...|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66778888887310 00 00000111111 2468999999999
Q ss_pred EEeCCCccceeEccCcchhhccceeeEEEEec
Q 009242 117 FQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQ 148 (539)
Q Consensus 117 ~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 148 (539)
|++ +.+|+|||||+...|...||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 996 6799999999998888899999999974
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.88 E-value=3.8e-09 Score=87.78 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=63.8
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEe-CCce
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQG 489 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a-dnpG 489 (539)
..+.++.|++|+|+ |.+...|+||+|+..+.. . .|. + . ....+|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~---~------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-L---A------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-H---H------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-c---c------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 45789999998884 777788999999865411 0 000 0 0 0011467788999999998888 7899
Q ss_pred eeEEEeechhhhhcccEEEEEEe
Q 009242 490 MWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 490 ~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|.|||| .|.+.||+..+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 79999999999985
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.85 E-value=7.4e-09 Score=85.06 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=63.8
Q ss_pred CCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc
Q 009242 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL 133 (539)
Q Consensus 54 nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~ 133 (539)
|..|-...|++++||+|++.++|.....+++...+... ...+.||++.++.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECcc-
Confidence 44454468999999999999999987777777666422 2457899999999994 789999999974
Q ss_pred hhhccceeeEEEEe
Q 009242 134 MHRAAGGYGGINIY 147 (539)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (539)
|...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 5567999999995
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.80 E-value=5.3e-09 Score=85.56 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=58.9
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCC--cccCCccCCCCeEEEEEEeCCCccceeEccCcchhh
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV--LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHR 136 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~--~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 136 (539)
-+.|++++||+|+ ++|.....+++|+|+..... ..|.- +.....+.||+++++.|. ++|+|+|||+ .|.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 3789999999865 58988789999999853211 11110 000245899999999885 5899999999 566
Q ss_pred ccceeeEEEEe
Q 009242 137 AAGGYGGINIY 147 (539)
Q Consensus 137 ~~Gl~G~liV~ 147 (539)
.+||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 67999999984
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.75 E-value=2.8e-08 Score=85.92 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=57.7
Q ss_pred CCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-CCccCCCCeEEEEEEeCCCccceeEccCc
Q 009242 54 NGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-NCPIPPNSNYTYKFQTKDQIGSYFYFPST 132 (539)
Q Consensus 54 nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 132 (539)
+..|-.+.|++++||+|+ +.|....++++++... .+|.... ...+.||++++|.|. ++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~--~~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF~---~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITFN---EAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEE--EEECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEcC---CCEEEEEEeCC
Confidence 445545799999999975 5588777777776542 1222222 346899999999883 68999999987
Q ss_pred chhhccceeeEEEEe
Q 009242 133 LMHRAAGGYGGINIY 147 (539)
Q Consensus 133 ~~~~~~Gl~G~liV~ 147 (539)
|. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 54 999999984
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.75 E-value=1.7e-08 Score=82.53 Aligned_cols=81 Identities=15% Similarity=0.255 Sum_probs=57.6
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
.+.|++++||+|+ +.|.....++++.++....+ ...++.......+.||+++++.| +++|+|+|||+ .|..+
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 4689999999865 55887778999998753210 00000000024589999999988 36899999999 56678
Q ss_pred ceeeEEEEe
Q 009242 139 GGYGGINIY 147 (539)
Q Consensus 139 Gl~G~liV~ 147 (539)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 86
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.74 E-value=2.7e-08 Score=87.03 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=70.9
Q ss_pred EEEecCCcEEEEEEEc--CCCCCCceeecCC--ceEEEe-ec-----cCcCCcccccccCCCCCCcceEEEeCCCcEEEE
Q 009242 412 VMQVNLHEYIEVVFQN--NEKTMQSWHLDGY--DFWVVG-YG-----SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVI 481 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N--~~~~~HP~HlHG~--~F~Vl~-~~-----~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 481 (539)
.+.++.|+.|+|++.| .+.+.|.||++.. .+.-+. .+ ...|-+. .-....+++|..|.||....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCCceeEE
Confidence 4789999999999999 6678999999853 121000 00 0001000 001134678999999999999
Q ss_pred EEEeCCceeeEEEeechhhhhcccEEEEEEe
Q 009242 482 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.71 E-value=3.3e-08 Score=79.47 Aligned_cols=74 Identities=20% Similarity=0.385 Sum_probs=55.8
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
.+.|++++||+|+ +.|.....++++.++.. +.. .....+.||+++++.| +++|+|||||+ .+...
T Consensus 18 P~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 4789999999975 55877778999988721 000 0024689999998877 46999999999 45556
Q ss_pred ceeeEEEEe
Q 009242 139 GGYGGINIY 147 (539)
Q Consensus 139 Gl~G~liV~ 147 (539)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=7e-08 Score=78.81 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=60.6
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
..+.++.|+.|+|+ |.+...|.+|+|+..+- +. ... ...+|+..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~--------~~~------~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--AD--------TAA------KLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HH--------HHH------HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--cc--------ccc------cccccccccCCCCEEEEEc--CCCeE
Confidence 35789999998885 77778899999875321 00 000 0115788999999888766 78999
Q ss_pred eEEEeechhhhhcccEEEEEEe
Q 009242 491 WNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|.|||| .|...||+..+.|.
T Consensus 79 y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 69999999999883
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.68 E-value=4.9e-08 Score=79.56 Aligned_cols=76 Identities=20% Similarity=0.392 Sum_probs=56.7
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc--c-CCccCCCCeEEEEEEeCCCccceeEccCcchhh
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG--T-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHR 136 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 136 (539)
+.|++++||+| ++.|.....++++.++... .+|..+ . ...+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999985 5668766788888876422 122111 1 24689999999988 36999999999 556
Q ss_pred ccceeeEEEEe
Q 009242 137 AAGGYGGINIY 147 (539)
Q Consensus 137 ~~Gl~G~liV~ 147 (539)
.+||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
No 90
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.65 E-value=8.4e-08 Score=78.30 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=61.5
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
..+.++.|+.|+| .|.+...|.+|+|+..+ ...++.. ..++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~~---------~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNAD---------AISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCHH---------HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCccccc---------cccccceecCCCCEEEEEe--CCCeE
Confidence 3578999999887 78877899999987532 0001100 0246889999999888765 68999
Q ss_pred eEEEeechhhhhcccEEEEEEe
Q 009242 491 WNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|.|||| .|.+.||+..+.|.
T Consensus 79 y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 69999999999873
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.64 E-value=6.4e-08 Score=79.65 Aligned_cols=77 Identities=9% Similarity=0.139 Sum_probs=56.1
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCC-------CCccc---CCccCCCCeEEEEEEeCCCccceeE
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQD-------GVLGT---NCPIPPNSNYTYKFQTKDQIGSYFY 128 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~D-------G~~~~---~~~i~pG~~~~y~~~~~~~~Gt~wY 128 (539)
-+.|++++||+|+ +.|.....++++++.- .. .+ ..++. ...+.||+++++.| +++|+|+|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y 85 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AG--APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTF 85 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TT--CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEE
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---cc--ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEE
Confidence 4789999999975 5688767788887731 00 11 00111 23589999999988 36999999
Q ss_pred ccCcchhhccceeeEEEEe
Q 009242 129 FPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 129 H~H~~~~~~~Gl~G~liV~ 147 (539)
||+ .|..+||.|.|+|+
T Consensus 86 ~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 86 YCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ECS--TTGGGTCEEEEEEC
T ss_pred EeC--CCcccCCeEEEEEC
Confidence 999 66778999999984
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.61 E-value=9.4e-08 Score=81.18 Aligned_cols=75 Identities=16% Similarity=0.072 Sum_probs=53.4
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhccc
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAG 139 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 139 (539)
..|+|++||+|++.++| .++++..+.- ..-+|.- ...+.||++++|.|+ ++|+|||+|. .|..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcCC
Confidence 68999999997776666 2444444321 1123321 244689999999884 5899999999 566789
Q ss_pred eeeEEEEecC
Q 009242 140 GYGGINIYQR 149 (539)
Q Consensus 140 l~G~liV~~~ 149 (539)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 93
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.59 E-value=2e-07 Score=76.22 Aligned_cols=77 Identities=18% Similarity=0.317 Sum_probs=57.9
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc------c-CCccCCCCeEEEEEEeCCCccceeEccC
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG------T-NCPIPPNSNYTYKFQTKDQIGSYFYFPS 131 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H 131 (539)
-+.|++++||+| +++|.....++++.++... .+|... . ...+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 368999999985 5689877789998887422 122210 1 235799999999885 6899999999
Q ss_pred cchhhccceeeEEEEe
Q 009242 132 TLMHRAAGGYGGINIY 147 (539)
Q Consensus 132 ~~~~~~~Gl~G~liV~ 147 (539)
.|..+||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 56677999999984
No 94
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.59 E-value=1.6e-07 Score=75.41 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=58.2
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
..+.++.|+.|+| .|.+...|.+|+|+.. . ...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--CCCEE
Confidence 3578999999887 4777788999998721 0 114778899999877765 88999
Q ss_pred eEEEeechhhhhcccEEEEEEe
Q 009242 491 WNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|.|||| .|...||...+.|.
T Consensus 72 y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCccCCCEEEEEEC
Confidence 999999 69999999999873
No 95
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.58 E-value=2e-07 Score=76.19 Aligned_cols=77 Identities=16% Similarity=0.280 Sum_probs=57.2
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc----c--c-CCccCCCCeEEEEEEeCCCccceeEccC
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL----G--T-NCPIPPNSNYTYKFQTKDQIGSYFYFPS 131 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H 131 (539)
.+.|++++||+| +++|.....++++.++... .+|.- + . ...+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKI--VFKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 378999999986 5589877788888876422 12211 0 0 235799999998884 6899999999
Q ss_pred cchhhccceeeEEEEe
Q 009242 132 TLMHRAAGGYGGINIY 147 (539)
Q Consensus 132 ~~~~~~~Gl~G~liV~ 147 (539)
.|..+||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56678999999984
No 96
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.57 E-value=8.6e-08 Score=81.85 Aligned_cols=76 Identities=16% Similarity=0.129 Sum_probs=52.9
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
.+.|+|++||+|++.++|. ++++..+.- ..-||.- ...+.||++++|.|+ ++|+|||||.. |...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE--TWKGKINEEITVTLS---KPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC--CCBCCTTCCCEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--CCcC
Confidence 3799999999976655542 444443321 0112221 245679999988884 68999999994 4668
Q ss_pred ceeeEEEEecC
Q 009242 139 GGYGGINIYQR 149 (539)
Q Consensus 139 Gl~G~liV~~~ 149 (539)
||.|.|+|.++
T Consensus 87 GM~G~I~V~~~ 97 (127)
T 3tu6_A 87 GMIGAIVVGEP 97 (127)
T ss_dssp TCEEEEEESSC
T ss_pred CcEEEEEECcC
Confidence 99999999874
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.51 E-value=3.8e-07 Score=77.30 Aligned_cols=75 Identities=12% Similarity=0.089 Sum_probs=54.1
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhccc
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAG 139 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 139 (539)
..|+|++||+| +++|.. .++++..+... .-+|.. ...+.||++++|.|+ .+|+|||||- .|..+|
T Consensus 22 ~~i~V~~GDTV--~f~n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTV--KFVPTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEE--EEECSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEE--EEEECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 68999999996 555654 56666665321 112321 245789999999884 5899999997 566679
Q ss_pred eeeEEEEecC
Q 009242 140 GYGGINIYQR 149 (539)
Q Consensus 140 l~G~liV~~~ 149 (539)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999863
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.50 E-value=4.1e-07 Score=76.16 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=58.6
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+|++.|.+...|-|++... .-+..++||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 47889999999999999866555444321 125678999999999999999999
Q ss_pred EEEeechhhhhcccEEEEEEec
Q 009242 492 NMRSAIWERQYLGQQFYLKVWN 513 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~ 513 (539)
.||||...|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766544 888888864
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.48 E-value=1.9e-07 Score=76.07 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=58.7
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+|+ |.+...|.++++...+. .+ .. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4688999998874 77778899999876540 00 00 0114667788898887765 889999
Q ss_pred EEEeechhhhhcccEEEEEEe
Q 009242 492 NMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|||+ .|.+.||...+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 69999999999873
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.41 E-value=6.8e-07 Score=73.00 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=60.4
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
..+.++.|+.|+| .|.+...|.+|++...|. .+ ++... . ...+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccccc---c----cccccceeeCCCCEEEEEe--CCCcE
Confidence 4578999999877 788778999999985430 00 11000 0 0124667788999888765 68999
Q ss_pred eEEEeechhhhhcccEEEEEEe
Q 009242 491 WNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|.|||+ .|.+.||...+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCEEEEEEC
Confidence 999999 69999999999873
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.40 E-value=1.1e-06 Score=72.03 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=59.6
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+|++.|.+...|.|.+.+..+ ...+.||....+.|+++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 3789999999999999987777776644322 2356788999999999999999
Q ss_pred EEEeechhhhhcccEEEEEEe
Q 009242 492 NMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|+|.. |...||...+.|+
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999974 9999999999874
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.38 E-value=5.5e-07 Score=73.44 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=55.2
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc-c-c---CCccCCCCeEEEEEEeCCCccceeEccCcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL-G-T---NCPIPPNSNYTYKFQTKDQIGSYFYFPSTL 133 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-~-~---~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~ 133 (539)
.+.|++++||+|+ +.|.....+++....-.. -+|.- + . ...+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 4799999999955 568876788887765211 12221 0 0 13589999999988 368999999986
Q ss_pred hhhccceeeEEEEe
Q 009242 134 MHRAAGGYGGINIY 147 (539)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (539)
|..+||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 4556999999984
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.34 E-value=1.3e-06 Score=74.79 Aligned_cols=92 Identities=15% Similarity=0.116 Sum_probs=61.0
Q ss_pred CCCCceEEEEcC-CEEEEEEEECCCCC-----ceee--eCCcCC-------CCCCCCC----CCcc-c--CCccCCCCeE
Q 009242 56 QFPGPRLDVVTN-DNIILNVINKLDQP-----FLLT--WNGIKQ-------RKNSWQD----GVLG-T--NCPIPPNSNY 113 (539)
Q Consensus 56 ~~pgP~i~v~~G-d~v~i~~~N~l~~~-----~~iH--~HG~~~-------~~~~~~D----G~~~-~--~~~i~pG~~~ 113 (539)
+|--..|.|++| |+|+|+|+|....+ +++- -+|... .....++ +-+. . ...|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343458999999 99999999986543 4332 222100 0000001 1111 1 2458999999
Q ss_pred EEEEEeC--CCccceeEccCcchhhccceeeEEEEec
Q 009242 114 TYKFQTK--DQIGSYFYFPSTLMHRAAGGYGGINIYQ 148 (539)
Q Consensus 114 ~y~~~~~--~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 148 (539)
++.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999964 26999999998776766 8999999963
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.32 E-value=1.5e-06 Score=73.91 Aligned_cols=76 Identities=17% Similarity=0.122 Sum_probs=51.2
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
.+.|+|++||+|+ +.|... .+++..+- ...-||... ....||++++|.|. .+|+|+|+|.. |..+
T Consensus 20 P~~i~V~~GdtV~--f~~~~~-~H~v~~~~-----~~~p~~~~~--~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK-GHNVESIK-----DMIPEGAEK--FKSKINENYVLTVT---QPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS-SCCCEECT-----TCSCTTCCC--CBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEE--EEECCC-CeEEEEec-----ccCCCCccc--eecCCCCEEEEEeC---CCEEEEEEeCC--cccC
Confidence 4789999999965 556533 44444431 111122211 33569999888874 58999999984 5567
Q ss_pred ceeeEEEEecC
Q 009242 139 GGYGGINIYQR 149 (539)
Q Consensus 139 Gl~G~liV~~~ 149 (539)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999863
No 105
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.29 E-value=4.6e-06 Score=68.95 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=54.3
Q ss_pred CCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc-CCccCCCCeEEEEEEeCCCccceeEccCcc
Q 009242 55 GQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT-NCPIPPNSNYTYKFQTKDQIGSYFYFPSTL 133 (539)
Q Consensus 55 G~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~ 133 (539)
..|--..|+|++||+|+ +.|.....+++...... .|.... ...+.||+++++.|. ++|+|+|+|-.|
T Consensus 29 ~~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf~---~~G~y~~~C~~H 96 (106)
T 1id2_A 29 MKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITFN---EAGSYDYFCTPH 96 (106)
T ss_dssp TEESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSSC
T ss_pred cEEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEeC---CCEEEEEEeCCC
Confidence 34434799999999975 55887666666654321 111111 235889999999883 689999999875
Q ss_pred hhhccceeeEEEEe
Q 009242 134 MHRAAGGYGGINIY 147 (539)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (539)
. ||.|.|+|+
T Consensus 97 ~----~M~G~I~V~ 106 (106)
T 1id2_A 97 P----FMRGKVIVE 106 (106)
T ss_dssp T----TCEEEEEEC
T ss_pred C----CCEEEEEEC
Confidence 4 999999984
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.27 E-value=1.6e-06 Score=73.73 Aligned_cols=76 Identities=13% Similarity=0.073 Sum_probs=51.8
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
.+.|+|++||+| ++.|... .+++..+. ...-||.. ...+.||++++|.|. .+|+|+|+|.. |..+
T Consensus 20 P~~i~V~~GdtV--~f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSI--KFLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEE--EEECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEE--EEEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--cccc
Confidence 368999999995 4566533 44444431 11122321 134679999888884 58999999984 5567
Q ss_pred ceeeEEEEecC
Q 009242 139 GGYGGINIYQR 149 (539)
Q Consensus 139 Gl~G~liV~~~ 149 (539)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.26 E-value=7e-07 Score=73.33 Aligned_cols=87 Identities=15% Similarity=0.026 Sum_probs=59.1
Q ss_pred eeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCce
Q 009242 410 TSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG 489 (539)
Q Consensus 410 ~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 489 (539)
...+.++.|+.|+|+ |.+...|.++++.-... .+.+.... .......+++.+.||+...+.| +.||
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CCEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----hcccccccceecCCCCEEEEEe--CCCe
Confidence 345789999998874 77778899998731100 00000000 0011124667788998887766 8899
Q ss_pred eeEEEeechhhhhcccEEEEEEe
Q 009242 490 MWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 490 ~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|.|||+ .|...||...+.|.
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeC--CCcccCCeEEEEEC
Confidence 9999999 79999999999883
No 108
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.18 E-value=2.7e-06 Score=75.78 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=61.2
Q ss_pred CCCCceEEE-EcCCEEEEEEEECCCCC-----ceeee--CCcCC-------C-C----CCCCCCCccc-CCccCCCCeEE
Q 009242 56 QFPGPRLDV-VTNDNIILNVINKLDQP-----FLLTW--NGIKQ-------R-K----NSWQDGVLGT-NCPIPPNSNYT 114 (539)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~--HG~~~-------~-~----~~~~DG~~~~-~~~i~pG~~~~ 114 (539)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|... . + -+..|.--.. ...|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454468999 99999999999987543 33322 22100 0 0 0001110001 24589999999
Q ss_pred EEEEeC-CCccceeEccCcchhhccceeeEEEEec
Q 009242 115 YKFQTK-DQIGSYFYFPSTLMHRAAGGYGGINIYQ 148 (539)
Q Consensus 115 y~~~~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 148 (539)
+.|+++ -++|+|||+|-...|.. ||.|.|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999963 16999999998877776 8999999963
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.14 E-value=1.5e-05 Score=68.09 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=59.1
Q ss_pred CCCCceEEE-EcCCEEEEEEEECCCCC-----ceeee--CCcCC-------------CCCCCCCCCccc-CCccCCCCeE
Q 009242 56 QFPGPRLDV-VTNDNIILNVINKLDQP-----FLLTW--NGIKQ-------------RKNSWQDGVLGT-NCPIPPNSNY 113 (539)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~--HG~~~-------------~~~~~~DG~~~~-~~~i~pG~~~ 113 (539)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|... .--+..|.--.. ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343458999 99999999999997543 44332 22000 000011111001 2458999999
Q ss_pred EEEEEeC-CCccc-eeEccCcchhhccceeeEEEEe
Q 009242 114 TYKFQTK-DQIGS-YFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 114 ~y~~~~~-~~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
++.|+++ -++|+ |||.|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999964 04655 999998777766 899999996
No 110
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.12 E-value=8.8e-06 Score=68.97 Aligned_cols=74 Identities=18% Similarity=0.078 Sum_probs=50.7
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcchhhcc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAA 138 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 138 (539)
-+.|+|++||+|+ +.|... .++++...- ..-+|.. ...+.||++++|.|+ ++|+|||+|..|..
T Consensus 20 P~~i~V~~GdtV~--f~n~d~-~H~v~~~~~-----~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVT--FIPTDK-GHNVETIKG-----MIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEE--EEESSS-SCCCEECTT-----CSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEccc-----ccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc---
Confidence 3689999999854 556643 455544421 1112221 234679999999884 58999999987643
Q ss_pred ceeeEEEEecC
Q 009242 139 GGYGGINIYQR 149 (539)
Q Consensus 139 Gl~G~liV~~~ 149 (539)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999873
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.12 E-value=9.9e-06 Score=84.66 Aligned_cols=92 Identities=16% Similarity=0.168 Sum_probs=66.6
Q ss_pred CCee--eEEEEECCCCCCceEEEEcCCEEEEEEEECC---CCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEE
Q 009242 44 LGVP--QEVILINGQFPGPRLDVVTNDNIILNVINKL---DQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQ 118 (539)
Q Consensus 44 ~G~~--~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~ 118 (539)
+|.+ ..+...+-.+-.+.|+|++||+|++.++|.. +..+++...++ | +...+.||++.++.|+
T Consensus 540 dGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------G---IK~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 540 DGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------G---VSMEISPQQTSSITFV 607 (638)
T ss_dssp ETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------T---EEEEECTTCEEEEEEE
T ss_pred CCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------C---ceeeeCCCCeEEEEEE
Confidence 4543 3445555666668999999999999999964 34444433332 1 1245889999999999
Q ss_pred eCCCccceeEccCcc-hhhccceeeEEEEec
Q 009242 119 TKDQIGSYFYFPSTL-MHRAAGGYGGINIYQ 148 (539)
Q Consensus 119 ~~~~~Gt~wYH~H~~-~~~~~Gl~G~liV~~ 148 (539)
+ +++|+|||+|... .....+|.|.++|++
T Consensus 608 a-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 608 A-DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp C-CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred c-CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 5 7899999999864 223357999999986
No 112
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.08 E-value=1.1e-05 Score=65.65 Aligned_cols=83 Identities=17% Similarity=0.101 Sum_probs=59.0
Q ss_pred eeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCce
Q 009242 410 TSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG 489 (539)
Q Consensus 410 ~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 489 (539)
...+.++.|+.|+| .|.+...|.++++...+. . + .+... . ...++.+.+.||+...+.| +.||
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~--~-~~~~~---~----~~~~~~~~~~~G~~~~~tf--~~~G 78 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---S--G-VDASK---I----SMSEEDLLNAKGETFEVAL--SNKG 78 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSSC---T--T-CCHHH---H----CCCTTCCBCSTTCEEEEEC--CSCE
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCCc---c--c-ccccc---c----ccccCccccCCCCEEEEEE--CCCc
Confidence 34578999999887 788778999999875330 0 0 00000 0 0123456788898877755 6899
Q ss_pred eeEEEeechhhhhcccEEEEEE
Q 009242 490 MWNMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 490 ~w~~HCHil~H~d~GMm~~~~V 511 (539)
.|.|||+ .|...||...+.|
T Consensus 79 ~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 79 EYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEEECG--GGTTTTCEEEEEE
T ss_pred eEEEEcC--CCcccCCEEEEEE
Confidence 9999999 6999999999987
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.06 E-value=2.4e-05 Score=66.74 Aligned_cols=91 Identities=18% Similarity=0.143 Sum_probs=59.9
Q ss_pred CCCCceEEE-EcCCEEEEEEEECCCCC-----ceeeeC--C---------c----CCCCCCCCCCCccc-CCccCCCCeE
Q 009242 56 QFPGPRLDV-VTNDNIILNVINKLDQP-----FLLTWN--G---------I----KQRKNSWQDGVLGT-NCPIPPNSNY 113 (539)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~H--G---------~----~~~~~~~~DG~~~~-~~~i~pG~~~ 113 (539)
+|--..|.| ++|++|+|+|+|....+ +++-+- + + ...--+..|.--.. ...|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 444468999 99999999999997553 544321 1 0 00000011111001 2358999999
Q ss_pred EEEEEeCC-Cccc-eeEccCcchhhccceeeEEEEe
Q 009242 114 TYKFQTKD-QIGS-YFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 114 ~y~~~~~~-~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
++.|+++. ++|+ |+|.|....|.. ||.|.|+|.
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999631 5885 999998877776 899999996
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.05 E-value=2.5e-05 Score=66.64 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=59.6
Q ss_pred CCCCceEEE-EcCCEEEEEEEECCCCC-----ceeee--CCcC-------CCCCCCCC----CCcc-c--CCccCCCCeE
Q 009242 56 QFPGPRLDV-VTNDNIILNVINKLDQP-----FLLTW--NGIK-------QRKNSWQD----GVLG-T--NCPIPPNSNY 113 (539)
Q Consensus 56 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~--HG~~-------~~~~~~~D----G~~~-~--~~~i~pG~~~ 113 (539)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|.. +.....++ +-+. + ...|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443468999 99999999999997543 54433 2210 00000111 0011 1 2358999999
Q ss_pred EEEEEeCC-Cccc-eeEccCcchhhccceeeEEEEe
Q 009242 114 TYKFQTKD-QIGS-YFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 114 ~y~~~~~~-~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
++.|+++. ++|+ |||.|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999630 4676 999998877777 899999984
No 115
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.00 E-value=1.4e-05 Score=65.80 Aligned_cols=71 Identities=10% Similarity=0.053 Sum_probs=50.9
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+| .|.+...|.+|+|... .|. ..+ ++-.+.||+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 478899999888 5887788999988532 010 000 122367888766555 889999
Q ss_pred EEEeechhhhhcccEEEEEE
Q 009242 492 NMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (539)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 65 99998877
No 116
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.93 E-value=4.4e-05 Score=67.48 Aligned_cols=83 Identities=13% Similarity=0.088 Sum_probs=60.4
Q ss_pred eEEEecCCcEEEEEEEcCC-CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceE-------EEeCCCc--EEE
Q 009242 411 SVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT-------AQVYPQS--WTV 480 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDT-------v~vpp~g--~~~ 480 (539)
+.+.++.|+.|.+++.|.+ ...|-|-++.. + ..+.. .|...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~-~~~~~---------~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------G-PPYAV---------MPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------C-SCCCS---------SCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------C-cchhc---------cccccccccccccccccCCCCceEEE
Confidence 3588999999999999974 55666666532 1 01100 0001111 1567888 999
Q ss_pred EEEEeCCceeeEEEeechhhhhcccEEEEEE
Q 009242 481 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 481 irf~adnpG~w~~HCHil~H~d~GMm~~~~V 511 (539)
+.|++ .||.|.||||+--|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999887
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.93 E-value=3e-05 Score=82.73 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=61.3
Q ss_pred eEEEecCCcEEEEEEEcCC---CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCC
Q 009242 411 SVMQVNLHEYIEVVFQNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN 487 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adn 487 (539)
..+.++.|+.|+|++.|.+ +..|.|++++..+. ..+.||....+.|+++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 3578999999999999964 34788888775421 36788999999999999
Q ss_pred ceeeEEEeec---hhhhhcccEEEEEEecCc
Q 009242 488 QGMWNMRSAI---WERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 488 pG~w~~HCHi---l~H~d~GMm~~~~V~~~~ 515 (539)
||.|.||||. ..|. ||...+.|.+++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 9999999993 3564 999999997653
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.40 E-value=0.00085 Score=56.29 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=55.3
Q ss_pred CCCCceEEEEc-CCEEEEEEEECCCCC-----ceeee-----------CCcCCCCCCCCCCC----ccc---CCccCCCC
Q 009242 56 QFPGPRLDVVT-NDNIILNVINKLDQP-----FLLTW-----------NGIKQRKNSWQDGV----LGT---NCPIPPNS 111 (539)
Q Consensus 56 ~~pgP~i~v~~-Gd~v~i~~~N~l~~~-----~~iH~-----------HG~~~~~~~~~DG~----~~~---~~~i~pG~ 111 (539)
+|--..|.|++ |++|+|+|+|....+ +++=+ -|+.. .+.+|=+ +.+ ...|.||+
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~--~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMAS--GLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHH--CGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhc--ChhhccCCCCCccceeccceeCCCc
Confidence 34457899986 999999999997543 43211 11110 0111111 111 34589999
Q ss_pred eEEEEEEeC--CCccceeEccCcchhhccceeeEEEEe
Q 009242 112 NYTYKFQTK--DQIGSYFYFPSTLMHRAAGGYGGINIY 147 (539)
Q Consensus 112 ~~~y~~~~~--~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 147 (539)
+++..|+.+ .++|+|.|.|. .|. ||.|.++|.
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999975 26899999999 444 899999884
No 119
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.26 E-value=0.00064 Score=57.38 Aligned_cols=75 Identities=12% Similarity=0.159 Sum_probs=51.4
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.++++.|++|+|+ |.+ ..|-+..+.. .+... .+...+.+|+...+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~--n~~-~~Hnv~~~~~----------~~p~g------------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFV--PTD-KSHNAESVRE----------VWPEG------------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEE--CSS-SSCCCEECTT----------TSCTT------------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEE--ECC-CCccEEEeCC----------cCCCC------------ccccccCCCCEEEEEe--CCCeEE
Confidence 5789999999985 544 5676666421 11100 0112344677655554 899999
Q ss_pred EEEeechhhhhcccEEEEEEecCc
Q 009242 492 NMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
.|||- .|...||...+.|.+|.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99996 69999999999998864
No 120
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.25 E-value=0.00083 Score=55.17 Aligned_cols=71 Identities=11% Similarity=0.004 Sum_probs=49.5
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+|+ |.+...|-+++....- +.. ..++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--CCCEEE
Confidence 4788999999885 7776778776653220 000 01233467788777665 789999
Q ss_pred EEEeechhhhhcccEEEEEE
Q 009242 492 NMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (539)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 65 99998887
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.24 E-value=0.0011 Score=53.54 Aligned_cols=82 Identities=16% Similarity=0.101 Sum_probs=55.6
Q ss_pred eeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCce
Q 009242 410 TSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG 489 (539)
Q Consensus 410 ~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 489 (539)
...+.++.|+.|+| .|.+...|-+.+....+ ...++.. ..-.+...+.||+...+.| +.||
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~------p~g~~~~---------~~~~~~~~~~~g~~~~~tf--~~~G 77 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV------PAGVDAD---------AISYDDYLNSKGETVVRKL--STPG 77 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS------CTTCCHH---------HHCEEEEECSTTCEEEEEC--CSCE
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC------ccccccc---------cccccccccCCCCEEEEEc--CCCE
Confidence 34588999999888 47766777766553110 0001000 0113456788898877765 8899
Q ss_pred eeEEEeechhhhhcccEEEEEEe
Q 009242 490 MWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 490 ~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|.|+|-+ |...||...+.|.
T Consensus 78 ~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 78 VYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEEchh--hccCCCEEEEEEC
Confidence 99999986 9989999998873
No 122
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.20 E-value=0.00042 Score=58.83 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=50.0
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
..+.++.|++|+|++.|. .|-+..+... + +... +.+.+.|++... ++++.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~----------~-P~g~-----------~~f~s~pGet~s--~TF~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG----------A-PEGA-----------ETWKGKINEEIT--VTLSKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC----------S-CTTC-----------CCCBCCTTCCCE--EECCSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc----------C-CCCc-----------cceecCCCCEEE--EEeCCCeE
Confidence 357899999999965552 4555443210 1 1000 011224677654 44589999
Q ss_pred eEEEeechhhhhcccEEEEEEecCc
Q 009242 491 WNMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
|.|||- .|...||...+.|.++.
T Consensus 76 y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 76 YMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999 59999999999998865
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.15 E-value=0.00094 Score=56.36 Aligned_cols=75 Identities=11% Similarity=0.064 Sum_probs=50.6
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.++++.|++|+|++.|. .|-+..+.. .+ +... +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47899999999977662 355554321 01 0000 011234677665555 899999
Q ss_pred EEEeechhhhhcccEEEEEEecCc
Q 009242 492 NMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
.|+|- .|...||...+.|.++.
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSSC
T ss_pred EEEeC--CCCcCCcEEEEEECCCC
Confidence 99999 59999999999998743
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.13 E-value=0.0012 Score=56.66 Aligned_cols=72 Identities=11% Similarity=-0.014 Sum_probs=50.6
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|+|+ |.+...|-+++.... .+. . ..++-.+.||+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4788999999884 877777887764321 000 0 01233567888777666 789999
Q ss_pred EEEeechhhhhcccEEEEEEe
Q 009242 492 NMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~ 512 (539)
.|||-+ |. ||...+.|+
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999987 76 999998873
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.89 E-value=0.0054 Score=52.56 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=53.3
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc-hhhcc
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-MHRAA 138 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~~~ 138 (539)
..|.++.|++|++.++|. +..+++-.-++ | +..-+.||+.-++.|+. +++|+|+|+|... .....
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~---------~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~ 125 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 125 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEEEEETTS---------S---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTST
T ss_pred CEEEEcCCCEEEEEEEeC-CccceEEecCC---------C---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcC
Confidence 479999999999999997 34444332222 1 12346899998999995 7899999999642 11224
Q ss_pred ceeeEEEEec
Q 009242 139 GGYGGINIYQ 148 (539)
Q Consensus 139 Gl~G~liV~~ 148 (539)
+|.|.++|.+
T Consensus 126 ~M~g~v~V~~ 135 (135)
T 2cua_A 126 NMFGTIVVKE 135 (135)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 8999998863
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.59 E-value=0.012 Score=52.14 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=56.7
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc-hhhc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-MHRA 137 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~~ 137 (539)
-..|.++.|++|++.++|. +..+++..-++. ++.-+.||+..++.|++ +++|+|++.|..- ...-
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSSEEEETTSEEEEEEECS-SSCEEEEETTSS------------CEEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred cCEEEEeCCCeEEEEEecC-CceEEEEECCCC------------eEEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 3579999999999999997 444444433321 12346799999999995 7899999999853 4445
Q ss_pred cceeeEEEEec
Q 009242 138 AGGYGGINIYQ 148 (539)
Q Consensus 138 ~Gl~G~liV~~ 148 (539)
.+|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 67999999873
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.54 E-value=0.0049 Score=51.93 Aligned_cols=74 Identities=8% Similarity=0.064 Sum_probs=47.6
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|++|.|++.+. .|-+.++- + ..+..... +.+.||+... ++++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~-~~p~~~~~-----------~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------D-MIPEGAEK-----------FKSKINENYV--LTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------T-CSCTTCCC-----------CBCCTTCCEE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------c-cCCCCccc-----------eecCCCCEEE--EEeCCCEEE
Confidence 47889999998854442 45555431 0 00100000 1124676544 555889999
Q ss_pred EEEeechhhhhcccEEEEEEecC
Q 009242 492 NMRSAIWERQYLGQQFYLKVWNA 514 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~ 514 (539)
.|+|- .|...||...+.|.++
T Consensus 75 ~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECT--TTGGGTCEEEEEESSS
T ss_pred EEEeC--CcccCCCEEEEEEcCC
Confidence 99997 4999999999999874
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.37 E-value=0.0081 Score=50.59 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=48.0
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|++|.| .|.+. .|-+.++- + ..+... ..+.+.||+... ++++.||.|
T Consensus 22 ~i~V~~GdtV~f--~n~~~-~H~v~~~~----------~-~~p~~~-----------~~~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1pmy_A 22 LVRLKPGDSIKF--LPTDK-GHNVETIK----------G-MAPDGA-----------DYVKTTVGQEAV--VKFDKEGVY 74 (123)
T ss_dssp EEEECTTCEEEE--ECSSS-SCCCEECT----------T-SSCTTC-----------CCCBCCTTSCEE--EECCSCEEE
T ss_pred EEEECCCCEEEE--EECCC-CcEEEEec----------c-cCCCCc-----------cceecCCCCEEE--EEeCCCeEE
Confidence 478899999888 45443 45554431 0 001000 011234677654 455889999
Q ss_pred EEEeechhhhhcccEEEEEEecCc
Q 009242 492 NMRSAIWERQYLGQQFYLKVWNAV 515 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~~ 515 (539)
.|+|-. |...||...+.|.++.
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 75 GFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp EEECST--TTTTTCEEEEEESSCC
T ss_pred EEEeCC--ccccCCEEEEEEcCCC
Confidence 999984 9999999999998643
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.36 E-value=0.013 Score=61.56 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=59.5
Q ss_pred eEEEecCCcEEEEEEEcCC---CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCC
Q 009242 411 SVMQVNLHEYIEVVFQNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN 487 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adn 487 (539)
..+.++.|+.|+|++.|.+ +..|.|.+.+... -+.+.||....+.|+++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 3578999999999999974 5677777655432 125678999999999999
Q ss_pred ceeeEEEeechhhh-hcccEEEEEEec
Q 009242 488 QGMWNMRSAIWERQ-YLGQQFYLKVWN 513 (539)
Q Consensus 488 pG~w~~HCHil~H~-d~GMm~~~~V~~ 513 (539)
||.|.+||...-|. +.+|...+.|+.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999976553 467888888753
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.04 E-value=0.029 Score=47.99 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=51.8
Q ss_pred EEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeE
Q 009242 413 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 492 (539)
Q Consensus 413 ~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (539)
+.++.|+.|+|++.|.+ ..|. |.+-+.+ --+.+.||....+.|+++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~~--------------------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGTN--------------------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTSS--------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCCC--------------------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 67899999999999874 3343 4432110 113456788888999999999999
Q ss_pred EEeec---hhhhhcccEEEEEEec
Q 009242 493 MRSAI---WERQYLGQQFYLKVWN 513 (539)
Q Consensus 493 ~HCHi---l~H~d~GMm~~~~V~~ 513 (539)
++|.. ..| .+|-..+.|.+
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~~ 135 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVKE 135 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEEC
T ss_pred EECcccCCCCc--CCCEEEEEEEC
Confidence 99976 345 58988888853
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.89 E-value=0.014 Score=51.75 Aligned_cols=92 Identities=7% Similarity=0.011 Sum_probs=60.7
Q ss_pred EEEe-cCCcEEEEEEEcCCCC-----CCceeecCCceEEEeeccCcCCcc-----cccccCC---CC-CCcceEEEeCCC
Q 009242 412 VMQV-NLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAAE-----KRRTYNL---AD-TLTRHTAQVYPQ 476 (539)
Q Consensus 412 ~~~~-~~g~~ve~~i~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~-----~~~~~~~---~~-p~~rDTv~vpp~ 476 (539)
-+.+ +.|+.|.|++.|.+.. .|-|-| ...+. ++.. ....-++ .+ -....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 3778 8999999999998754 354433 22210 0000 0000000 01 123346678999
Q ss_pred cEEEEEEEeC--CceeeEEEeechhhhhcccEEEEEEec
Q 009242 477 SWTVILVSLD--NQGMWNMRSAIWERQYLGQQFYLKVWN 513 (539)
Q Consensus 477 g~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~~ 513 (539)
+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.+
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999988 8999999999888888 8999998853
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.62 E-value=0.025 Score=47.50 Aligned_cols=72 Identities=7% Similarity=0.030 Sum_probs=46.1
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
.+.++.|+.|.|+ |.+. .|-+++... .+... . ..+.+.+|+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~~----------~~p~~-~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIKG----------MIPDG-A-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECTT----------CSCTT-C-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEccc----------ccCCC-c-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 4788999998885 5443 566665431 11100 0 011234677655554 889999
Q ss_pred EEEeechhhhhcccEEEEEEecC
Q 009242 492 NMRSAIWERQYLGQQFYLKVWNA 514 (539)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~ 514 (539)
.|+|-+ |.. |...+.|.++
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEETT--EEE--EEEEEEESSS
T ss_pred EEEeCC--Ccc--CEEEEEEeCC
Confidence 999987 655 9999999773
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.26 E-value=0.092 Score=44.39 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=61.4
Q ss_pred eEEEecCC-cEEEEEEEcCCCC-----CCceeecCCceEEEeeccCcCCc--------ccccccCC-CC-CCcceEEEeC
Q 009242 411 SVMQVNLH-EYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAA--------EKRRTYNL-AD-TLTRHTAQVY 474 (539)
Q Consensus 411 ~~~~~~~g-~~ve~~i~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~~-~~-p~~rDTv~vp 474 (539)
.-++++.| +.|.+++.|.+.. .|-|-| ...+. ... .....+-. .+ -....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 34789999 9999999998754 354433 32221 000 00000000 01 1123456788
Q ss_pred CCcEEEEEEEeC---CceeeEEEeechhhhhcccEEEEEEec
Q 009242 475 PQSWTVILVSLD---NQGMWNMRSAIWERQYLGQQFYLKVWN 513 (539)
Q Consensus 475 p~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~~ 513 (539)
||++..|.|.++ .||.|-|.|-+--|.. ||-..+.|.+
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 999999999997 8999999999888888 8999998853
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.98 E-value=0.063 Score=45.37 Aligned_cols=91 Identities=8% Similarity=0.010 Sum_probs=59.6
Q ss_pred EEEe-cCCcEEEEEEEcCCCC-----CCceeecCCceEEEeeccCcCCccc----c--cccCC---CCC-CcceEEEeCC
Q 009242 412 VMQV-NLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAAEK----R--RTYNL---ADT-LTRHTAQVYP 475 (539)
Q Consensus 412 ~~~~-~~g~~ve~~i~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~~----~--~~~~~---~~p-~~rDTv~vpp 475 (539)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+ ...... . ..-++ .++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4778 8899999999998755 365443 2211 000000 0 00011 111 1234557899
Q ss_pred CcEEEEEEEeC--Cce-eeEEEeechhhhhcccEEEEEEe
Q 009242 476 QSWTVILVSLD--NQG-MWNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 476 ~g~~~irf~ad--npG-~w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|++..|.|.+. .+| .|-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 798 4999999888888 899999885
No 135
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.87 E-value=0.13 Score=45.48 Aligned_cols=73 Identities=11% Similarity=0.144 Sum_probs=55.1
Q ss_pred EEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeE
Q 009242 413 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 492 (539)
Q Consensus 413 ~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (539)
+.++.|+.|++.+.|. +-.|.|.+=... =-+.+.||....+.|+++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 6789999999999997 445555442211 113455788889999999999999
Q ss_pred EEeec-hhhhhcccEEEEEEec
Q 009242 493 MRSAI-WERQYLGQQFYLKVWN 513 (539)
Q Consensus 493 ~HCHi-l~H~d~GMm~~~~V~~ 513 (539)
+.|.. --+.+.+|...+.|++
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99995 3567889999998863
No 136
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.35 E-value=0.12 Score=43.60 Aligned_cols=91 Identities=13% Similarity=0.018 Sum_probs=59.0
Q ss_pred EEEe-cCCcEEEEEEEcCCCC-----CCceeecCCceEEEeeccCcCCcc--------cccccCC-CCC-CcceEEEeCC
Q 009242 412 VMQV-NLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAAE--------KRRTYNL-ADT-LTRHTAQVYP 475 (539)
Q Consensus 412 ~~~~-~~g~~ve~~i~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~--------~~~~~~~-~~p-~~rDTv~vpp 475 (539)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+ .+... ....+-. .++ ....|..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 4788 8899999999998754 354433 3221 00000 0000100 011 1224557899
Q ss_pred CcEEEEEEEeC--Ccee-eEEEeechhhhhcccEEEEEEe
Q 009242 476 QSWTVILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKVW 512 (539)
Q Consensus 476 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 512 (539)
|++..|.|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7765 999999888888 899999885
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.00 E-value=0.16 Score=42.88 Aligned_cols=92 Identities=8% Similarity=0.026 Sum_probs=58.6
Q ss_pred EEEe-cCCcEEEEEEEcCCCC-----CCceeecCCceEEEeeccC------cCCccccccc-CCCCC-CcceEEEeCCCc
Q 009242 412 VMQV-NLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSG------QWAAEKRRTY-NLADT-LTRHTAQVYPQS 477 (539)
Q Consensus 412 ~~~~-~~g~~ve~~i~N~~~~-----~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-~~~~p-~~rDTv~vpp~g 477 (539)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+.. .........+ .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4788 8999999999998754 365443 221100 0000000000 00111 123455689999
Q ss_pred EEEEEEEeC--Ccee-eEEEeechhhhhcccEEEEEE
Q 009242 478 WTVILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 478 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 511 (539)
+..|.|.+. .+|. |-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7876 999999888888 89888877
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.15 E-value=1 Score=37.56 Aligned_cols=94 Identities=11% Similarity=0.140 Sum_probs=58.6
Q ss_pred eeEEEecC-CcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCc---c--c---cccc-CC-CCCCcceEEEeCCCcE
Q 009242 410 TSVMQVNL-HEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA---E--K---RRTY-NL-ADTLTRHTAQVYPQSW 478 (539)
Q Consensus 410 ~~~~~~~~-g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~---~--~---~~~~-~~-~~p~~rDTv~vpp~g~ 478 (539)
..-+.++. |+.|.+++.|.+..+ --.=||.| ||+... .... . . ...| .. ...+...|..|.||+.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred cCEEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 34578876 999999999997542 11112344 333321 0000 0 0 0011 01 1234556778999999
Q ss_pred EEEEEEeC---CceeeEEEeechhhhhcccEEEEEE
Q 009242 479 TVILVSLD---NQGMWNMRSAIWERQYLGQQFYLKV 511 (539)
Q Consensus 479 ~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 511 (539)
..|.|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99999998 7999999999 788 99998877
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.29 E-value=7.2 Score=32.08 Aligned_cols=70 Identities=14% Similarity=0.305 Sum_probs=50.0
Q ss_pred cCCEE--EEEEEecCCCCeeeEEEe-CCeeEEEEe--cCcccc--------ceeeceEEEcCCceEEEEEEeCC--CCcc
Q 009242 208 QGKTY--MFRISNVGLSTSFNFRIQ-GHTMKLVEV--EGSHTI--------QNIYDSLDVHVGQSVSVLVTLNQ--PPKD 272 (539)
Q Consensus 208 ~G~~~--rlRliN~~~~~~~~~~l~-gh~~~via~--DG~~~~--------p~~~d~l~l~pg~R~dv~v~~~~--~~g~ 272 (539)
.|+.+ .|.+.|.+... ..+.+. |+++.++-. +|..+- ........|.||+...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44544 67788988864 477775 666555544 466542 23467899999999999999884 5899
Q ss_pred eEEEEe
Q 009242 273 YYIVAS 278 (539)
Q Consensus 273 ~~~~~~ 278 (539)
|.+.+.
T Consensus 95 Ytl~a~ 100 (120)
T 3isy_A 95 YEVKVT 100 (120)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998875
No 140
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=77.73 E-value=5.2 Score=38.57 Aligned_cols=79 Identities=10% Similarity=0.162 Sum_probs=58.2
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
+-+.++.|+.|++.+++.+ -.|.| +|-+-+ --+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf-------~iP~lg--------------------~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAW-------TIPAFA--------------------VKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEE-------EEGGGT--------------------EEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-cccee-------eEcccC--------------------ceEEecCCceEEEEEEeCCCEE
Confidence 3478999999999999865 33444 442221 1233456888889999999999
Q ss_pred eEEEeech-hhhhcccEEEEEEecCccc
Q 009242 491 WNMRSAIW-ERQYLGQQFYLKVWNAVHS 517 (539)
Q Consensus 491 w~~HCHil-~H~d~GMm~~~~V~~~~~~ 517 (539)
|...|.-+ -..+..|-..++|+++++.
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~F 268 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEKY 268 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHHH
Confidence 99999965 4567888889999887654
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=77.69 E-value=5 Score=36.35 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=55.0
Q ss_pred EEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceee
Q 009242 412 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 491 (539)
Q Consensus 412 ~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (539)
-+.++.|+.|++.+.+.+- .| .|+|-+.+ =-+.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~DV-iH-------SF~IP~lg--------------------vK~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV-MH-------SFFIPRLG--------------------SQIYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESSS-CE-------EEEEGGGT--------------------EEEEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCCc-ee-------eEEecccC--------------------cEEEecCCceEEEEEEeCCCeEE
Confidence 4778999999999998753 33 45553321 11234468888899999999999
Q ss_pred EEEeechhh-hhcccEEEEEEe-cCcc
Q 009242 492 NMRSAIWER-QYLGQQFYLKVW-NAVH 516 (539)
Q Consensus 492 ~~HCHil~H-~d~GMm~~~~V~-~~~~ 516 (539)
...|-.+-. -+..|-..++|+ .+++
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 120 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIATPDRAA 120 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHHH
T ss_pred EEEcccccccchhhceEEEEEECCHHH
Confidence 999987643 356677888887 5544
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=67.74 E-value=12 Score=35.27 Aligned_cols=78 Identities=13% Similarity=0.178 Sum_probs=55.8
Q ss_pred eEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCcee
Q 009242 411 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 490 (539)
Q Consensus 411 ~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (539)
+-+.++.|+.|++.+++.+- .|. |+|-+.+ ...| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~DV-iHs-------f~ip~l~-----------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV-IHS-------WTVPAFG-----------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS-CEE-------EEEGGGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECcc-cce-------eeecccC-----------------ceEE---ecCCceeEEEEecCCcEE
Confidence 34789999999999998753 344 4443221 1123 446788889999999999
Q ss_pred eEEEeechh-hhhcccEEEEEEecCcc
Q 009242 491 WNMRSAIWE-RQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 491 w~~HCHil~-H~d~GMm~~~~V~~~~~ 516 (539)
|...|--.- -.+..|-..++|+++++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~~ 249 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEEA 249 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHHH
Confidence 999998653 34567778888887654
No 143
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=64.77 E-value=16 Score=32.98 Aligned_cols=59 Identities=12% Similarity=0.166 Sum_probs=44.8
Q ss_pred eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 203 TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 203 ~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
.+.++.|+.+||+|-+... .+.|.|.....+ +...||..-.+.+.++ .+|.|...|+-.
T Consensus 42 ~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK----------------~daiPGr~n~l~~~~~-~pG~y~g~CsE~ 100 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQ----------------IYAMAGMQTRLHLIAN-EPGTYDGICAEI 100 (205)
T ss_dssp EEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEECCS-SSEEEEEEECSC
T ss_pred eEEEeCCCEEEEEEecCCc--eeeEEecccCcE----------------EEecCCceEEEEEEeC-CCeEEEEEcccc
Confidence 6899999999999988644 456766644332 3456788888888888 799999999754
No 144
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=58.60 E-value=18 Score=33.35 Aligned_cols=79 Identities=10% Similarity=0.096 Sum_probs=55.4
Q ss_pred eeEEEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCce
Q 009242 410 TSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG 489 (539)
Q Consensus 410 ~~~~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 489 (539)
.+.+.++.|+.|++.+.+.+- .|. |+|-+-| .+.| .-||....+.|.++.||
T Consensus 139 dn~lvlP~~~~Vr~~vtS~DV-iHs-------f~vP~lg-----------------~K~D---aiPGr~n~~~~~~~~~G 190 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSEDV-LHS-------WAVPSLG-----------------LKTD---AIPGRLNQTTLMSSRPG 190 (227)
T ss_dssp SSCEEEETTSCEEEEEEESSS-CEE-------EEEGGGT-----------------EEEE---ECTTCCEEEEECCSSCE
T ss_pred CceEEEecCCEEEEEEEeCcc-cce-------eeecccC-----------------cEEE---ecCCceEEEEEecCCcE
Confidence 345789999999999998653 344 4443221 1223 34677888899999999
Q ss_pred eeEEEeechh-hhhcccEEEEEEecCcc
Q 009242 490 MWNMRSAIWE-RQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 490 ~w~~HCHil~-H~d~GMm~~~~V~~~~~ 516 (539)
.|...|.-+- --+.-|-..++|+++++
T Consensus 191 ~y~g~Cse~CG~~Hs~M~~~v~vv~~~~ 218 (227)
T 1v54_B 191 LYYGQCSEICGSNHSFMPIVLELVPLKY 218 (227)
T ss_dssp EEEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEEehhhcccccccCeEEEEEEcHHH
Confidence 9999998653 34566777888877654
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=56.82 E-value=35 Score=32.15 Aligned_cols=76 Identities=16% Similarity=0.083 Sum_probs=52.4
Q ss_pred ceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc-hhhcc
Q 009242 60 PRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-MHRAA 138 (539)
Q Consensus 60 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~~~ 138 (539)
..|.+..|+.|++.+++. +.-++...-.+. ++.-+-||..-...|.+ +++|+|+..|..- ..--.
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------~k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------VKQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------EEEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------ceEEecCCceeEEEEec-CCcEEEEEEChHhcccCcc
Confidence 469999999999999987 333333333321 12346689888888985 7899999999753 22233
Q ss_pred ceeeEEEEecC
Q 009242 139 GGYGGINIYQR 149 (539)
Q Consensus 139 Gl~G~liV~~~ 149 (539)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 47777777653
No 146
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.11 E-value=39 Score=32.41 Aligned_cols=77 Identities=18% Similarity=0.070 Sum_probs=53.7
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc-hhhc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-MHRA 137 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~~ 137 (539)
-..|.+..|+.|++.+++. +.-++...-.+. ++.-+-||..-...|.+ +++|+|+..|..- ....
T Consensus 188 dN~lvlP~g~~V~~~ltS~-DViHsf~iP~lg------------~k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTAT-DVIHAWTIPAFA------------VKQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SSCEEEESSSEEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred cceEEEEcCCEEEEEEEeC-CccceeeEcccC------------ceEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 3579999999999999996 333333332221 12335689988888985 7899999999853 3334
Q ss_pred cceeeEEEEecC
Q 009242 138 AGGYGGINIYQR 149 (539)
Q Consensus 138 ~Gl~G~liV~~~ 149 (539)
..|.+.+.|.++
T Consensus 254 s~M~~~v~vvs~ 265 (298)
T 3hb3_B 254 AYMPIVVKAVSQ 265 (298)
T ss_dssp TSCCEEEEEECH
T ss_pred cCCeeEEEEEcH
Confidence 457778877764
No 147
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=54.31 E-value=29 Score=34.00 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=15.1
Q ss_pred CCccCCCCeEEEEEEeC
Q 009242 104 NCPIPPNSNYTYKFQTK 120 (539)
Q Consensus 104 ~~~i~pG~~~~y~~~~~ 120 (539)
..||+|||+.+.+.++.
T Consensus 319 ~~pI~PGETr~~~v~a~ 335 (382)
T 1yew_A 319 NSPLAPGETRTVDVTAS 335 (382)
T ss_dssp CSCBCTTCEEEEEEEEE
T ss_pred CCCcCCCceeEEEEEee
Confidence 57899999999999973
No 148
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.85 E-value=43 Score=27.08 Aligned_cols=46 Identities=20% Similarity=0.494 Sum_probs=31.1
Q ss_pred EEEEEEEecCCCC-eeeEEEeCC-eeEEEEecCccccceeeceEEEcCCceEEEEEEe
Q 009242 211 TYMFRISNVGLST-SFNFRIQGH-TMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL 266 (539)
Q Consensus 211 ~~rlRliN~~~~~-~~~~~l~gh-~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~ 266 (539)
.|+|+|+|.+... .+.+.+.|. .++++ | + ..+.+.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 5999999999876 456666663 23332 2 1 14899999977766654
No 149
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=46.08 E-value=17 Score=30.22 Aligned_cols=46 Identities=17% Similarity=0.287 Sum_probs=27.4
Q ss_pred EEEEEECCCCCc---eeeeCCcCCCC---CCCCCCCcccCCccCCCCeEEEE
Q 009242 71 ILNVINKLDQPF---LLTWNGIKQRK---NSWQDGVLGTNCPIPPNSNYTYK 116 (539)
Q Consensus 71 ~i~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~~~~i~pG~~~~y~ 116 (539)
.|++.|....+. +=||.=..-.+ .-..+||-|-|..|.||++|+|.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 477788776554 45775321111 11235554447779999988885
No 150
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=44.96 E-value=26 Score=27.77 Aligned_cols=52 Identities=15% Similarity=0.048 Sum_probs=35.0
Q ss_pred EEEEEEEECCCCCc---eeeeCCcCCCCCCCCCCCccc-CCccCCCCeEEEEEEe-CCCccce
Q 009242 69 NIILNVINKLDQPF---LLTWNGIKQRKNSWQDGVLGT-NCPIPPNSNYTYKFQT-KDQIGSY 126 (539)
Q Consensus 69 ~v~i~~~N~l~~~~---~iH~HG~~~~~~~~~DG~~~~-~~~i~pG~~~~y~~~~-~~~~Gt~ 126 (539)
.+.|.|+|-|+.+. .++..|.-. ..+ --. ...|.||++..+++.. |..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 67899999997653 566666421 222 111 3469999999999888 5567764
No 151
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=44.79 E-value=17 Score=35.32 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=53.0
Q ss_pred EEecCCcEEEEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeE
Q 009242 413 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 492 (539)
Q Consensus 413 ~~~~~g~~ve~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (539)
+.++.|+.|++.+++.+- .|. |+|-+-+ =-+.+-||....+.|.++.||.|.
T Consensus 153 l~lP~g~~V~~~lTS~DV-iHs-------f~IP~lg--------------------~k~DaiPGr~n~~~~~~~~~G~y~ 204 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNSV-MNS-------FFIPRLG--------------------SQIYAMAGMQTRLHLIANEPGTYD 204 (315)
T ss_dssp CCCCSSSEEEEEECBSSS-CEE-------EEEGGGT--------------------EEEEECBTSCEEEEEECCSCBCCE
T ss_pred EEEeCCCEEEEEEEeCCc-cce-------eeecccC--------------------cEEeecCCcceeeEEecCCCeEEE
Confidence 568999999998887653 344 4443221 112344678888999999999999
Q ss_pred EEeechh-hhhcccEEEEEEe-cCcc
Q 009242 493 MRSAIWE-RQYLGQQFYLKVW-NAVH 516 (539)
Q Consensus 493 ~HCHil~-H~d~GMm~~~~V~-~~~~ 516 (539)
..|--+- -.+..|-..++|+ ++++
T Consensus 205 g~CsE~CG~~Hs~M~~~v~vv~~~~~ 230 (315)
T 1fft_B 205 GISASYSGPGFSGMKFKAIATPDRAA 230 (315)
T ss_dssp EBCCSCCSTTTTTCCEECCBCSSTHH
T ss_pred EeccccchhhHHhccceEEEecCHHH
Confidence 9998654 3456677788887 5554
No 152
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=43.38 E-value=17 Score=30.17 Aligned_cols=46 Identities=26% Similarity=0.356 Sum_probs=27.0
Q ss_pred EEEEEECCCCCc---eeeeCCcCCCC---CCCCCCCcccCCccCCCCeEEEE
Q 009242 71 ILNVINKLDQPF---LLTWNGIKQRK---NSWQDGVLGTNCPIPPNSNYTYK 116 (539)
Q Consensus 71 ~i~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~~~~i~pG~~~~y~ 116 (539)
.|++.|....+. +=||.=..-.+ .-..+||-|-|..|.||++|+|.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 477788776554 45775321111 01134554447779999988886
No 153
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=41.05 E-value=1.4e+02 Score=24.20 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=45.6
Q ss_pred eeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCccc----CCccCCCCeEEEEEEeCC-
Q 009242 47 PQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGT----NCPIPPNSNYTYKFQTKD- 121 (539)
Q Consensus 47 ~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~----~~~i~pG~~~~y~~~~~~- 121 (539)
...+-..|-+-=.=+|+...|++..+.|.+...+ ..| -|+||-... ...|.||++.+|+...++
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 3334444544434577777777777777774321 111 235554332 456999999999999863
Q ss_pred -CccceeEcc
Q 009242 122 -QIGSYFYFP 130 (539)
Q Consensus 122 -~~Gt~wYH~ 130 (539)
.+|+|..+.
T Consensus 90 ~~pG~Ytl~a 99 (120)
T 3isy_A 90 PEPGTYEVKV 99 (120)
T ss_dssp CCSEEEEEEE
T ss_pred CCCccEEEEE
Confidence 489997664
No 154
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=40.65 E-value=55 Score=32.12 Aligned_cols=93 Identities=14% Similarity=0.132 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhcccCCCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCc-------
Q 009242 10 LVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPF------- 82 (539)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~------- 82 (539)
++.+.+++|.+++.++.+....++|...... ...-+|+++|+|..+++.
T Consensus 4 ~~~~~~~a~~~la~~a~a~~l~v~Ls~~~~~------------------------~~~~~vk~tvtN~g~~~~~lLk~~~ 59 (343)
T 2x3c_A 4 VTPIALLLAGVLASPLCAAGLDAQLTLVDGS------------------------TDDVRVNLTLTNTGDKPIRLLKWQL 59 (343)
T ss_dssp -------------------CEEEEEEECCCS------------------------SSCCEEEEEEEECSSSCEEEEGGGS
T ss_pred HHHHHHHHHHHHhhhcccCceEEEEEecccC------------------------CCCeEEEEEEEeCCCCceEeeccCC
Q ss_pred ----------------eeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCC-----CccceeEc
Q 009242 83 ----------------LLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKD-----QIGSYFYF 129 (539)
Q Consensus 83 ----------------~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~-----~~Gt~wYH 129 (539)
.+-+-|+.++-....+... ..|+||++.+.+|.++. ..|+|-+.
T Consensus 60 lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f---~~L~pG~Sve~~~dla~~ydLs~gG~y~v~ 124 (343)
T 2x3c_A 60 PGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF---QLLKAGQSLTVQAEVSGLYDMSAQGQYSIR 124 (343)
T ss_dssp CSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE---EEECTTCEEEEEEECTTTBTCCSCEEEEEE
T ss_pred CCcCccceEEEEeCCcccceeeEEEeccCCChhhc---EEeCCCCeEEEEEehhhccccCCCceEEEE
No 155
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=40.65 E-value=22 Score=29.98 Aligned_cols=46 Identities=17% Similarity=0.328 Sum_probs=26.9
Q ss_pred EEEEEECCCCCc---eeeeCCcCCCC---CCCCCCCcccCCccCCCCeEEEE
Q 009242 71 ILNVINKLDQPF---LLTWNGIKQRK---NSWQDGVLGTNCPIPPNSNYTYK 116 (539)
Q Consensus 71 ~i~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~~~~i~pG~~~~y~ 116 (539)
.|++.|....+. +=||-=....+ ....+||-|-|..|.||++|+|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEc
Confidence 477788776554 45775321111 01134544447779999988886
No 156
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=39.13 E-value=74 Score=29.14 Aligned_cols=76 Identities=11% Similarity=-0.013 Sum_probs=51.0
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcccCCccCCCCeEEEEEEeCCCccceeEccCcc-hhhc
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTL-MHRA 137 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~~ 137 (539)
...+.+..|..|++.++.. +.-++...-.+. ++.-.-||..-...|.+ +++|+|+..|..- ....
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg------------~K~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLG------------LKTDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccC------------cEEEecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 4679999999999999986 334444333321 12335688888888884 7899999999743 2222
Q ss_pred cceeeEEEEec
Q 009242 138 AGGYGGINIYQ 148 (539)
Q Consensus 138 ~Gl~G~liV~~ 148 (539)
+-|.+.+.|.+
T Consensus 205 s~M~~~v~vv~ 215 (227)
T 1v54_B 205 SFMPIVLELVP 215 (227)
T ss_dssp GGCCEEEEEEC
T ss_pred ccCeEEEEEEc
Confidence 33666666654
No 157
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=37.35 E-value=1.4e+02 Score=24.75 Aligned_cols=65 Identities=12% Similarity=0.178 Sum_probs=39.3
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCC--------cccCCccCCCCeEEEEEEeCCCccce
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV--------LGTNCPIPPNSNYTYKFQTKDQIGSY 126 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~--------~~~~~~i~pG~~~~y~~~~~~~~Gt~ 126 (539)
|-+|.++.||++.|.|.-+-...++-..-.. .+..-.|++ |.-...+.-|+...+.|++ ..+|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCceE
Confidence 5689999999999999977554444444331 111112332 1101235667788888886 557764
No 158
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=37.00 E-value=19 Score=30.11 Aligned_cols=46 Identities=28% Similarity=0.465 Sum_probs=26.8
Q ss_pred EEEEEECCCCCc---eeeeCCcCCCC---CCCCCCCcccCCccCCCCeEEEE
Q 009242 71 ILNVINKLDQPF---LLTWNGIKQRK---NSWQDGVLGTNCPIPPNSNYTYK 116 (539)
Q Consensus 71 ~i~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~~~~i~pG~~~~y~ 116 (539)
.|++.|....+. +=||-=....+ ....+||-|-|..|.||++|+|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEc
Confidence 477788776554 44665221111 01234554447779999988886
No 159
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=32.20 E-value=70 Score=26.31 Aligned_cols=61 Identities=10% Similarity=0.161 Sum_probs=34.2
Q ss_pred CceEEEEcCCEEEEEEEECCC---CCc--eee--eCCcCCCC-CCCCCCCcccCCccCCCCeEEEEEEe
Q 009242 59 GPRLDVVTNDNIILNVINKLD---QPF--LLT--WNGIKQRK-NSWQDGVLGTNCPIPPNSNYTYKFQT 119 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~---~~~--~iH--~HG~~~~~-~~~~DG~~~~~~~i~pG~~~~y~~~~ 119 (539)
.+.=.+++|+.+.|.+.=... ... .+| ..|+...- ....|+=-++.|||.+|+.++|.+..
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEe
Confidence 345567888877777762221 122 222 23443321 11233322237999999999999776
No 160
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=29.36 E-value=52 Score=26.67 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=28.0
Q ss_pred EEEEeCCCccceeEccCcchhhccceeeEE-EEecC
Q 009242 115 YKFQTKDQIGSYFYFPSTLMHRAAGGYGGI-NIYQR 149 (539)
Q Consensus 115 y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~l-iV~~~ 149 (539)
..+++ +.+|++||-|-...|=..||...+ .|...
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 46776 569999999998888888999999 88764
No 161
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=29.05 E-value=95 Score=25.02 Aligned_cols=67 Identities=7% Similarity=0.026 Sum_probs=40.0
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCcc-------c--CCccCCCCeEEEEEEeCCCccce
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG-------T--NCPIPPNSNYTYKFQTKDQIGSY 126 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~-------~--~~~i~pG~~~~y~~~~~~~~Gt~ 126 (539)
|-+|.++.||++.|.|.-+-....+-......-......+|.-. . ...+..|+...+.|++ ..+|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 55799999999999999776666555555311000001122110 0 1235667888899996 557763
No 162
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=28.43 E-value=55 Score=26.53 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=28.0
Q ss_pred EEEeCCceeeEEEeechhhhhcccEEEE-EEecCc
Q 009242 482 LVSLDNQGMWNMRSAIWERQYLGQQFYL-KVWNAV 515 (539)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~~ 515 (539)
++..+.+|..-|=|=...|=..||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4566889999999999999999999999 776654
No 163
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=26.70 E-value=1.1e+02 Score=30.39 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=0.0
Q ss_pred EEEEEEEECCCCCc---eeeeCCcCCCCCCC-------------CCCCccc-CCccCCCCeEEEEEEeCC
Q 009242 69 NIILNVINKLDQPF---LLTWNGIKQRKNSW-------------QDGVLGT-NCPIPPNSNYTYKFQTKD 121 (539)
Q Consensus 69 ~v~i~~~N~l~~~~---~iH~HG~~~~~~~~-------------~DG~~~~-~~~i~pG~~~~y~~~~~~ 121 (539)
++.++++|+.+.+. -+-.-|++...+.. .+|.- . . +|.|||+++.+.++.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
No 164
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=26.57 E-value=1.5e+02 Score=25.89 Aligned_cols=84 Identities=10% Similarity=-0.080 Sum_probs=47.9
Q ss_pred eEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCcccccee----eceE--E-EcCCceEEEEEE
Q 009242 193 GVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNI----YDSL--D-VHVGQSVSVLVT 265 (539)
Q Consensus 193 ~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~----~d~l--~-l~pg~R~dv~v~ 265 (539)
..+.|..+.+.-.+..|+.++||+---.....-.+.+ .|.+-..+|..+-... ...+ . +.+|+.+.+.+.
T Consensus 53 v~l~d~~G~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~ 129 (188)
T 2r5o_A 53 YHIQSAGVDFPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFS 129 (188)
T ss_dssp EEEEETTEESCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEE
T ss_pred EEEEECCCCEeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEE
Confidence 3455655555556889999888876655443322222 2455555666542111 1112 3 678996655554
Q ss_pred eC--CCCcceEEEEee
Q 009242 266 LN--QPPKDYYIVAST 279 (539)
Q Consensus 266 ~~--~~~g~~~~~~~~ 279 (539)
++ =.+|+|.+.+.-
T Consensus 130 f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 130 LPVDLNSGDYLLSFGI 145 (188)
T ss_dssp EECCBCSEEEEEEEEE
T ss_pred EecccCCCeEEEEEEE
Confidence 43 368999988753
No 165
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=25.52 E-value=88 Score=25.68 Aligned_cols=62 Identities=23% Similarity=0.277 Sum_probs=34.4
Q ss_pred CceEEEEcCCEEEEEEE---ECCCCCceeee----CCcCCC-CCCCCCCCc-ccCCccCCCCeEEEEEEeC
Q 009242 59 GPRLDVVTNDNIILNVI---NKLDQPFLLTW----NGIKQR-KNSWQDGVL-GTNCPIPPNSNYTYKFQTK 120 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~---N~l~~~~~iH~----HG~~~~-~~~~~DG~~-~~~~~i~pG~~~~y~~~~~ 120 (539)
.+.=.+++|+.+.|.+. |.......... .|+... ..+..|+=. ++.|||..|+.++|.+.++
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 34566778887777766 22212222222 333321 112234432 2369999999999998874
No 166
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=24.02 E-value=2.2e+02 Score=23.02 Aligned_cols=30 Identities=7% Similarity=0.211 Sum_probs=21.3
Q ss_pred CceEEEEcCCEEEEEEEECCCCCceeeeCC
Q 009242 59 GPRLDVVTNDNIILNVINKLDQPFLLTWNG 88 (539)
Q Consensus 59 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG 88 (539)
+-+|.++.||++.|.|.-+-....+-...+
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~ 41 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSG 41 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEec
Confidence 446999999999999986655555544444
No 167
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=23.45 E-value=70 Score=30.90 Aligned_cols=59 Identities=12% Similarity=0.165 Sum_probs=42.8
Q ss_pred eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009242 203 TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR 280 (539)
Q Consensus 203 ~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~~~ 280 (539)
.+.++.|+.+||++-.... .|.|.+.....+ +..-||..-.+.+.++ .+|.|...|+-.
T Consensus 152 ~l~lP~g~~V~~~lTS~DV--iHsf~IP~lg~k----------------~DaiPGr~n~~~~~~~-~~G~y~g~CsE~ 210 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSV--MNSFFIPRLGSQ----------------IYAMAGMQTRLHLIAN-EPGTYDGISASY 210 (315)
T ss_dssp BCCCCSSSEEEEEECBSSS--CEEEEEGGGTEE----------------EEECBTSCEEEEEECC-SCBCCEEBCCSC
T ss_pred eEEEeCCCEEEEEEEeCCc--cceeeecccCcE----------------EeecCCcceeeEEecC-CCeEEEEecccc
Confidence 5778999999998865433 556766644333 3456788888888888 799999999743
No 168
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=23.18 E-value=2.9e+02 Score=25.85 Aligned_cols=60 Identities=8% Similarity=-0.134 Sum_probs=34.6
Q ss_pred EEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEEEEEEeCCCCcceEEEEe
Q 009242 214 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAS 278 (539)
Q Consensus 214 lRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~~~g~~~~~~~ 278 (539)
+=|||.+.. ..+..+|..+..++.--.......-+.|.|+.|. +|.|.+. .+.++.+-+.
T Consensus 51 ~~iv~l~G~--~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~v~sA 110 (270)
T 2qjv_A 51 RCLVLVAGL--ASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELAVCSA 110 (270)
T ss_dssp EEEEEEESC--EEEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEEEEEE
T ss_pred EEEEEecce--EEEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEEEEee
Confidence 347777664 3567777777665321111111123789999999 5556666 4566655544
No 169
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=21.90 E-value=1.2e+02 Score=25.44 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=29.0
Q ss_pred EEe-CCceeeEEEeechhhhhcccEEEEEEecCcc
Q 009242 483 VSL-DNQGMWNMRSAIWERQYLGQQFYLKVWNAVH 516 (539)
Q Consensus 483 f~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (539)
|.. +.+|.+-|=|=+..|=..||-+.+.|.....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 455 7799999999999999999999999987654
No 170
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=21.30 E-value=27 Score=28.95 Aligned_cols=22 Identities=27% Similarity=0.290 Sum_probs=17.8
Q ss_pred eEEEecCCEEEEEEEecCCCCe
Q 009242 203 TFNGDQGKTYMFRISNVGLSTS 224 (539)
Q Consensus 203 ~l~v~~G~~~rlRliN~~~~~~ 224 (539)
.++|+.||+|||.+.|-+..+.
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~ 93 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWT 93 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEE
Confidence 5999999999999888655443
No 171
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=20.45 E-value=2.5e+02 Score=21.39 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=36.0
Q ss_pred EecCCEEEEEEEecCCCCeeeEEEeCC--eeEEEEecCccccceeeceEEEcCCceEEEEEEeCC--CCcceEEEEee
Q 009242 206 GDQGKTYMFRISNVGLSTSFNFRIQGH--TMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ--PPKDYYIVAST 279 (539)
Q Consensus 206 v~~G~~~rlRliN~~~~~~~~~~l~gh--~~~via~DG~~~~p~~~d~l~l~pg~R~dv~v~~~~--~~g~~~~~~~~ 279 (539)
-++||++++|++-..... .+. .+- .+++...+|..+.- -.........+...+.++. ..|.|.+++..
T Consensus 13 YrPGetV~~~~~~~~~~~-~p~--~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENF-HPL--NELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGG-CBC--CCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCC-cCC--CCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 579999999977553321 111 111 23444445543321 1122233445666666654 46899888763
Done!