Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>009243
MGASSSTQQHPPSEQSEVESLAASTGALPLLQNAFSKLAHPQTSTLPLQSLQQCFSLNYD
NLICETPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVKCCGRMPASMLLNT
LLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKG
KEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTTVPSLTDC
FTQFVYARLQSCVTSENPSEISTSSFGDISSTKAQDTHLLSPGRAWTISLTFRSSISEEF
LKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSAR
KWIIGALTQQGFENKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHP
KPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVW
GIGGRSAKQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSDPNAVRREDR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009243
        (539 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164875 - symbol:AT5G39590 "AT5G39590" species...  1698  8.6e-175  1


>TAIR|locus:2164875 [details] [associations]
            symbol:AT5G39590 "AT5G39590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0000902 "cell morphogenesis"
            evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0048193
            "Golgi vesicle transport" evidence=RCA] EMBL:CP002688 EMBL:AB012243
            InterPro:IPR006571 Pfam:PF07534 SMART:SM00584 UniGene:At.21744
            UniGene:At.24451 IPI:IPI00523419 RefSeq:NP_198775.1
            ProteinModelPortal:Q9FKA3 STRING:Q9FKA3 PRIDE:Q9FKA3
            EnsemblPlants:AT5G39590.1 GeneID:833955 KEGG:ath:AT5G39590
            TAIR:At5g39590 HOGENOM:HOG000005654 InParanoid:Q9FKA3 OMA:SPEKMMM
            PhylomeDB:Q9FKA3 ProtClustDB:CLSN2687337 Genevestigator:Q9FKA3
            Uniprot:Q9FKA3
        Length = 542

 Score = 1698 (602.8 bits), Expect = 8.6e-175, P = 8.6e-175
 Identities = 314/542 (57%), Positives = 404/542 (74%)

Query:     1 MGASSSTQQHPPSEQSEVESLAASTGALPLLQNAFSKLAHXXXXXXXXXXXXXCFSLNYD 60
             MGASSST     SE+ E+ESLAASTGALPLL+ +FSKL                F L+YD
Sbjct:     1 MGASSSTDDKESSEKREIESLAASTGALPLLKRSFSKLVDSQTNTVPFQSLKQSFGLSYD 60

Query:    61 NLICE-TPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVKCCGRMPASMLLN 119
              +  E   KV+D F  LL++LG S+ DLFFVP+K GLSW+EF  G+VKCCGRM  SM  N
Sbjct:    61 TITTEGEQKVSDLFPKLLEHLGSSLVDLFFVPDKEGLSWVEFASGYVKCCGRMSNSMSFN 120

Query:   120 TLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSK 179
             TLLRV+  T   AG + KLEFES +ADCKI+G +   ++L+  WMCWTM WD R+ K ++
Sbjct:   121 TLLRVYYVTAKNAGFSPKLEFESDEADCKINGSISVSELLVFLWMCWTMSWDGRSSKAAE 180

Query:   180 GKEEIFQPDVNHLVLSAVESC--AEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTTVPSL 237
              K  +F PD++HL+LSAV SC  +E G+ ++ W+ ++S LE++LP+GKFLTW L TVP L
Sbjct:   181 MKGCLFLPDISHLILSAVVSCTDSESGNSLDVWETDVSGLELELPIGKFLTWALMTVPCL 240

Query:   238 TDCFTQFVYARLQSCVTSENPSEISTSSFGDISSTKAQDTHLLSPGRAWTISLTFRSSIS 297
             T+C + F  +RLQ+  ++E+ S  S S+  D S++K  +  LL+ GRAW ISLT +S+IS
Sbjct:   241 TECLSHFCNSRLQNVTSAEDGSGPSKSTAVDDSASKTSENTLLTCGRAWAISLTSKSTIS 300

Query:   298 EEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHET 357
             EE L  C P +  E  E+LLYRS  HG+G+NR WSN+EGYH P+L+++SA+     +  +
Sbjct:   301 EEILSSCFPGNSGEPNEHLLYRSYYHGKGMNRLWSNVEGYHAPILVIISASCKVEHEATS 360

Query:   358 SARKWIIGALTQQGFENKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYE 417
             S RKW+IGA+ QQGFEN+D FYGSSGNL++ISP FH F  SGKEKNF YSHLHP+G VY+
Sbjct:   361 SERKWVIGAILQQGFENRDAFYGSSGNLFSISPVFHAFSSSGKEKNFAYSHLHPAGGVYD 420

Query:   418 PHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEI 477
              HPKPVGI FGGT+GNERIFIDEDFA++TVRHHAVD+TYQ GSL P+QG+LPVE+L+L+I
Sbjct:   421 AHPKPVGIGFGGTLGNERIFIDEDFAKITVRHHAVDKTYQSGSLFPNQGYLPVEALVLDI 480

Query:   478 EVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSDPNAVRRE 537
             E WG+GG  A+++Q  Y+KREELFT QRRK+DLK F +WEDSPEKMMMDMM +PNA R+E
Sbjct:   481 EAWGLGGNKAREIQQKYQKREELFTNQRRKIDLKTFTNWEDSPEKMMMDMMGNPNAPRKE 540

Query:   538 DR 539
             +R
Sbjct:   541 ER 542


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      539       526   0.00091  119 3  11 22  0.38    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  335 KB (2169 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.00u 0.20s 41.20t   Elapsed:  00:00:02
  Total cpu time:  41.00u 0.20s 41.20t   Elapsed:  00:00:02
  Start:  Tue May 21 11:17:53 2013   End:  Tue May 21 11:17:55 2013

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