BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009243
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1LWV7|K1609_DANRE TLD domain-containing protein KIAA1609 homolog OS=Danio rerio
GN=si:ch211-260p9.6 PE=2 SV=1
Length = 450
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 286 WTISLTFRSSISEEFLKLCCPV--DGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLI 343
WT R +S L P+ +G A +L+ + +HG R + + GP ++
Sbjct: 231 WT---DLRCVLSLPLLMFLSPLLPEGHSAPWRMLFSTKMHGESFTRLLGSCKS-RGPTVL 286
Query: 344 LVSANSGDASDHETSARKWIIGALTQQGFENKDVFYGSSGN-LYAISPTFHVFLPSGKEK 402
LV G +I G + Q +E K F G S L+++ P VF +G
Sbjct: 287 LVKDTKG-----------YIFGGFSSQSWEVKPQFQGDSRCFLFSVFPYMRVFTCTGYND 335
Query: 403 NFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLI 462
+++Y + G+ P+ G+ GG G +++D DF R TY L
Sbjct: 336 HYMYLN---QGQQTMPN----GLGMGGQHGYFGLWLDYDFGHGHSRARPRCTTYGSPQLS 388
Query: 463 PHQGFLPVESLILEIEVWGIG 483
+ F + +EVWG+G
Sbjct: 389 ADEDF-----KLDTLEVWGVG 404
>sp|Q8K0P3|K1609_MOUSE TLD domain-containing protein KIAA1609 OS=Mus musculus GN=Kiaa1609
PE=2 SV=1
Length = 455
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
LL+ + LHG+ ++ S+I GP L+++ G ++ G +E K
Sbjct: 266 LLFSTQLHGQSFSQLCSHITS-QGPSLLVLEDRDG-----------YVFGGFASCSWEVK 313
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNE 434
F G + L++I+P L +G +F+Y + Y P G+ GG
Sbjct: 314 PQFQGDNRCFLFSIAPRMATHLHTGYNNHFMYLN-------YGQQTMPNGLGMGGQHHYF 366
Query: 435 RIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483
+++ DF + + TY L + F L ++EVWG+G
Sbjct: 367 GLWVAADFGKGHSKAKPACTTYNSPQLSAQEDF-----LFDKMEVWGLG 410
>sp|Q6P9B6|K1609_HUMAN TLD domain-containing protein KIAA1609 OS=Homo sapiens GN=KIAA1609
PE=1 SV=2
Length = 456
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
LL+ S LHG ++ +I + GP + ++ DH+ K + G +E K
Sbjct: 268 LLFSSELHGHSFSQLCGHIT-HRGPCVAVLE-------DHD----KHVFGGFASCSWEVK 315
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNE 434
F G + L++I P+ V+ +G +++Y + + P G+ GG
Sbjct: 316 PQFQGDNRCFLFSICPSMAVYTHTGYNDHYMYLN-------HGQQTIPNGLGMGGQHNYF 368
Query: 435 RIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMSY 494
+++D DF + R TY L + F ++EVW +G S +Q+
Sbjct: 369 GLWVDVDFGKGHSRAKPTCTTYNSPQLSAQENF-----QFDKMEVWAVGDPSEEQLAKGN 423
Query: 495 K 495
K
Sbjct: 424 K 424
>sp|C5DY36|RTC5_ZYGRC Restriction of telomere capping protein 5 OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=RTC5 PE=3 SV=1
Length = 554
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 374 NKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGN 433
NK+ F G + +SP VF S +E ++ + + P A + GN
Sbjct: 395 NKEFFGGPHTTIVQLSPFQEVF-GSSRENALYFNTIGGGIGIGNKQPVIKSTAKSYSPGN 453
Query: 434 ERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMS 493
+ +D +RH + G ++ + F V+ L+ ++EVWG GG + Q+
Sbjct: 454 VSLTMDSALEFAVLRHAGQGGVLKPGLVVGDKDF-EVKMLLQDVEVWGCGGEKELEEQLK 512
Query: 494 YKKREELFTEQRRKVDLK 511
+ EE ++R++++L+
Sbjct: 513 QWEWEESEAKRRQQINLR 530
>sp|Q756J6|RTC5_ASHGO Restriction of telomere capping protein 5 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=RTC5 PE=3 SV=2
Length = 557
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Query: 374 NKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVY---EPHPKPVGIAFGGT 430
NKD+F + ++P +F +E +Y + G + +P KP G +
Sbjct: 393 NKDLFGDMDTTIIQLAPRQKIF--KAQEAPNIYFNAVGGGIGFGSSQPSVKPAGKRYFP- 449
Query: 431 MGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVES----LILEIEVWGIGGRS 486
GN +D R+ + HGS +P P+ +I ++EVWG GG
Sbjct: 450 -GNVSFTVDPSMEFAVFRNVGDGGMFSHGSAVPAPAEQPLSYEHRLMIKDLEVWGYGGEE 508
Query: 487 AKQMQMSYKKREELFTEQRRKV 508
Q Q+ + EE +R+ +
Sbjct: 509 ELQKQIQRWQWEEAEATKRKYI 530
>sp|A8KBE0|OXR1_XENTR Oxidation resistance protein 1 OS=Xenopus tropicalis GN=oxr1 PE=2
SV=2
Length = 870
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L+Y ++ HG L + + G P+L+++ DA I GAL + F+
Sbjct: 734 LVYSTAKHGMSLKTLYRTMLGLDTPVLLVI--KDSDAQ---------IFGALASEPFKIS 782
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D FYG+ L+ P F VF +G F+
Sbjct: 783 DCFYGTGETFLFTFCPDFEVFKWTGDNMFFI 813
>sp|Q4KMM3|OXR1_MOUSE Oxidation resistance protein 1 OS=Mus musculus GN=Oxr1 PE=1 SV=3
Length = 866
Score = 39.3 bits (90), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L+Y + HG L + + G P+L+++ + G + GAL + F+
Sbjct: 730 LVYGTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDGQ-----------VFGALASEPFKVS 778
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNE 434
D FYG+ ++ P F VF +G F+ + +AFGG G
Sbjct: 779 DGFYGTGETFVFTFCPEFEVFKWTGDNMFFIKGDMD-------------SLAFGGGGGEF 825
Query: 435 RIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWG 481
+++D D R H+ +T+ + +L + F I +IE+W
Sbjct: 826 ALWLDGDLYH--GRSHSC-KTFGNHTLSKKEDF-----FIQDIEIWA 864
>sp|Q4V8B0|OXR1_RAT Oxidation resistance protein 1 OS=Rattus norvegicus GN=Oxr1 PE=1
SV=3
Length = 839
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L+Y + HG L + + G P+L+++ + G + GAL + F+
Sbjct: 703 LVYGTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDGQ-----------VFGALASEPFKVS 751
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHL 409
D FYG+ ++ P F VF +G F+ +
Sbjct: 752 DGFYGTGETFVFTFCPEFEVFKWTGDNMFFIKGDM 786
>sp|Q6CMD3|RTC5_KLULA Restriction of telomere capping protein 5 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=RTC5 PE=3 SV=1
Length = 572
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 374 NKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTM-- 431
NKD+F SS + + P +F + VY + G + +P+ A G
Sbjct: 406 NKDLFGDSSTKIIQLHPRQEIFDADPFKTGNVYFNT-VGGGIGIGSSQPIIKANGKKYFP 464
Query: 432 GNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQG----FLPVESLILEIEVWGIGGRSA 487
GN + ID RH +++ G LI +G +I ++EVWG GG
Sbjct: 465 GNVSLTIDSSLEFGIFRHLGAGGSFKPGRLISGRGEERNSFEYRFIIQDVEVWGCGGEKE 524
Query: 488 KQMQMSYKKREELFTEQRRKVDLK 511
+ Q+ + EE ++R+K++L+
Sbjct: 525 LEEQVKQWQWEEAEAKRRQKINLQ 548
>sp|C7YJ03|RTC5_NECH7 Restriction of telomere capping protein 5 OS=Nectria haematococca
(strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI)
GN=RTC5 PE=3 SV=1
Length = 607
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 87/227 (38%), Gaps = 37/227 (16%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANS-GDASD-----------------HET 357
LLY + G + F + + + P L+LVS D + H +
Sbjct: 358 LLYSGNDAGFSMGSFQTKVFNWQAPTLLLVSGTRLSDIPEGGQEVAFAASLPTKRFPHGS 417
Query: 358 SARKWIIGALTQQGFEN--KDVFYGSSGNLYAISPTFHVFLPSGKEKNFVY-----SHLH 410
+ + G ++ +++ ++ F + L+ + P VF S K++V +H H
Sbjct: 418 KSDQLTFGVYVREPWKHTHRECFGDADTVLFQLEPIHDVFPASTINKDYVTFTKAPAH-H 476
Query: 411 PSGRVYEPHPKPVGIAFGGTM---GNERIFIDEDFARVTVRHHAVDR--TYQHGSL--IP 463
P PHP P M G + +D+ F H R ++ S+
Sbjct: 477 PMLSFGCPHPHPSQAHRKADMLHLGPVSLTLDDSFEFAVFNHDFTSRGGAFRSSSVRKFD 536
Query: 464 HQGFLPVESLILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDL 510
Q +ESL EVWG GG + + Q EE E RRK++L
Sbjct: 537 FQERFQIESL----EVWGCGGDAEARAQAERWAWEEREAEARRKINL 579
>sp|C5DJG1|RTC5_LACTC Restriction of telomere capping protein 5 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=RTC5 PE=3 SV=1
Length = 554
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 357 TSARKWIIGALTQQGFE--NKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPSGR 414
+ RK + L + ++ N ++F + +SP V+ S K N ++ L
Sbjct: 379 SGKRKLLFAILINEPWKVTNSELFGDIKTTIVQLSPIQEVYKAS-KPGNVYFNTLGGGIG 437
Query: 415 VYEPHP--KPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVES 472
+ P P K G+ F GN + ID + R+ GS+ P P
Sbjct: 438 IGSPQPIIKSSGVKF--VPGNVSLTIDPNLEFAAFRNVGFG-----GSIAPSNT--PTSE 488
Query: 473 ---LILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLK 511
LI +IE WG GG + QM + EE ++R++++LK
Sbjct: 489 HKFLIQDIETWGCGGEKELEEQMKNWEWEEAEAQRRQRINLK 530
>sp|B4F6Q9|OXR1_XENLA Oxidation resistance protein 1 OS=Xenopus laevis GN=oxr1 PE=2 SV=2
Length = 857
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L+Y ++ HG L + + G P+L+++ + I GAL + F+
Sbjct: 721 LVYSTAKHGMSLKTLYRLMLGLDTPVLLVIKDSDSQ-----------IFGALASEPFKVS 769
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D FYG+ L+ P F VF +G F+
Sbjct: 770 DCFYGTGETFLFTFCPDFEVFKWTGDNMFFI 800
>sp|A2ACG1|CT118_MOUSE Uncharacterized protein C20orf118 homolog OS=Mus musculus GN=Gm1332
PE=3 SV=1
Length = 198
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 315 NLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFEN 374
+L++ +S G L R + +EG+ GP+L+L+ G + GA +
Sbjct: 61 SLVFCTSRDGFSLRRLYRQMEGHSGPVLLLLRDQDGQ-----------MFGAFSSSAIRL 109
Query: 375 KDVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHL 409
FYG+ L++ SP VF +G FV L
Sbjct: 110 SKGFYGTGETFLFSFSPQLKVFKWTGHNSFFVKGDL 145
>sp|P89659|RDRP_ORSVC Replicase large subunit OS=Odontoglossum ringspot virus (isolate
Korean Cy) PE=3 SV=2
Length = 1612
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 424 GIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483
G G M + +++DF + H RTYQ +L VES+ + + G+
Sbjct: 379 GSVTSGKMKRSEVMVNKDFVYTVLNHI---RTYQDKALTYKNVLSFVESIRSRVIINGVS 435
Query: 484 GRSA--------KQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSD 530
RS + + M++ + +L E + +V LKKF ++D+ + +SD
Sbjct: 436 ARSEWDVDKSVLQALSMTFLLQTKL-AEAKDQVVLKKFQKFDDTVTNLFWKQISD 489
>sp|Q84133|RDRP_ORSVS Replicase large subunit OS=Odontoglossum ringspot virus (isolate
Singapore 1) PE=3 SV=2
Length = 1612
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 424 GIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483
G G M + +++DF + H RTYQ +L VES+ + + G+
Sbjct: 379 GSVTSGKMKRSEVMVNKDFVYTVLNHI---RTYQDKALTYKNVLSFVESIRSRVIINGVT 435
Query: 484 GRSA--------KQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSD 530
RS + + M++ + +L E + +V LKKF ++D+ + +SD
Sbjct: 436 ARSEWDVDKSVLQALSMTFLLQTKL-AEAKDQVVLKKFQKFDDTVTNLFWKQISD 489
>sp|Q8N573|OXR1_HUMAN Oxidation resistance protein 1 OS=Homo sapiens GN=OXR1 PE=1 SV=2
Length = 874
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L+Y + HG L + + G P+L+++ + G + GAL + +
Sbjct: 738 LVYGTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDG-----------QVFGALASEPLKVS 786
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D FYG+ ++ P F VF +G F+
Sbjct: 787 DGFYGTGETFVFTFCPEFEVFKWTGDNMFFI 817
>sp|A5PKL1|OXR1_BOVIN Oxidation resistance protein 1 OS=Bos taurus GN=OXR1 PE=2 SV=2
Length = 872
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKW-IIGALTQQGFEN 374
L+Y + HG L + + G P+L+++ + W + GA Q F+
Sbjct: 736 LVYGTRKHGTSLKTLYRTMTGLDTPVLMVIKDSD------------WQVFGAFASQPFKV 783
Query: 375 KDVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D FYG+ ++ P F VF +G F+
Sbjct: 784 SDGFYGNGETFVFTFCPEFEVFKWTGDNMFFI 815
>sp|Q54BF1|GACE_DICDI Rho GTPase-activating protein gacE OS=Dictyostelium discoideum
GN=gacE PE=3 SV=1
Length = 1132
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 315 NLLYRSSLHGRGL----NRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQ 370
+LL RS GR + N+ ++++ PLL S G ++ + + + +L Q
Sbjct: 619 DLLVRSLERGRAIAKLTNKSLASLQSRKFPLLESNSGAGGTSNFGKLPESRPVFESLAQN 678
Query: 371 GFENKDVFYGSSGNLYAISPTFHVFLPSGKEKNFVYSHLHPS 412
GF DV+ G+ L + H+ +PS + V L P+
Sbjct: 679 GFTELDVWEGTVDLLEVVKKFHHILIPSADQSKCVVEFLLPA 720
>sp|Q6CB30|RTC5_YARLI Restriction of telomere capping protein 5 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=RTC5 PE=3 SV=1
Length = 567
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 90/242 (37%), Gaps = 36/242 (14%)
Query: 305 CPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSA-----NSGDASDHETSA 359
CP G LY G F S G+ P ++LVS N+ T
Sbjct: 308 CPFLGNVENLKTLYMGQKDGFAQRSFESGTFGWRAPSVLLVSGLRLNTNNQSLKRANTFD 367
Query: 360 RKW--IIGALTQQ--------GF--------ENKDVFYGSSGNLYAISPTFHVFLPSGKE 401
K+ + GA+ GF +K+ F S ++ ++PT +F+
Sbjct: 368 EKYPRLKGAVVPDDGESEVKFGFYLDVPWRSSSKETFGSSKCFIFQLAPTQDIFVGETNP 427
Query: 402 KNFVYSHLH-PSGRVY-EPHPKPVGIAFG----GTMGNERIFIDE--DFARVTVRHHAVD 453
N Y H P G + P PK +G G +G + +D+ +F + HHA
Sbjct: 428 SNHAYFLKHDPGGLAFGSPIPKSIGRFTGVQAPQVVGTVSLTLDDSLEFGKF---HHA-G 483
Query: 454 RTYQHGSLIPHQGFLPVESL-ILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLKK 512
+ + I G L E + +EVWG+G + + Q + EE RR ++
Sbjct: 484 KGGSYAPSINRPGELMDERFKVRNVEVWGVGNDTDLEHQRKRIEWEEREASYRRTINKNN 543
Query: 513 FA 514
A
Sbjct: 544 IA 545
>sp|A4RI88|RTC5_MAGO7 Restriction of telomere capping protein 5 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RTC5 PE=3
SV=1
Length = 629
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 76/237 (32%), Gaps = 44/237 (18%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDH-------------------- 355
LLY G + F S + + P L+LV D DH
Sbjct: 367 LLYSGDEDGFSMGSFESKVFNWRAPTLLLVRGRRLD--DHPDGTRESAFAASIPPRRFPN 424
Query: 356 -------ETSARKWIIGALTQQGFEN--KDVFYGSSGNLYAISPTFHVFLPSGKEKNFVY 406
E S GA Q + + ++ F S L+ + P VF S +++
Sbjct: 425 GGGGGTTENSDEIITFGAFIAQPWRHTHRECFGDDSSVLFQLGPVHDVFRASTMNRDYAG 484
Query: 407 --------SHLHPSGRVY---EPHPKPVGIAFGG--TMGNERIFIDEDFARVTVRHHAVD 453
S H G ++ P P A G +G+ +F+D F H
Sbjct: 485 FVKPTGSGSSNHHGGIMFGCPAPSPSKASSATGALVALGSVSLFLDSSFEFGVFTHDHTS 544
Query: 454 RTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDL 510
R + + +EVWG GG + Q E E RRK++L
Sbjct: 545 RGGAYAGSTSRPRNFQERFAVNCLEVWGCGGDEESKRQAERWAWEAREAEARRKINL 601
>sp|Q6DFV7|NCOA7_MOUSE Nuclear receptor coactivator 7 OS=Mus musculus GN=Ncoa7 PE=2 SV=2
Length = 943
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L Y + HG L + P+L+++ I GA F+
Sbjct: 807 LAYSTLEHGTSLKTLYRKSASLDSPVLLVIK-----------DMDNQIFGAYATHPFKFS 855
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D +YG+ LY SP F VF SG+ F+
Sbjct: 856 DHYYGTGETFLYTFSPNFKVFKWSGENSYFI 886
>sp|A0PJX2|CT118_HUMAN Uncharacterized protein C20orf118 OS=Homo sapiens GN=C20orf118 PE=2
SV=1
Length = 215
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 315 NLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFEN 374
+L++ +S G L + +EG GP+L+++ G I GA +
Sbjct: 78 SLVFCTSRDGFSLQSLYRRMEGCSGPVLLVLRDQDGQ-----------IFGAFSSSAIRL 126
Query: 375 KDVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHL 409
FYG+ L++ SP VF +G FV L
Sbjct: 127 SKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGDL 162
>sp|Q5ZMS4|NCOA7_CHICK Nuclear receptor coactivator 7 OS=Gallus gallus GN=NCOA7 PE=2 SV=1
Length = 907
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L Y + HG L + P+L+++ I GA F
Sbjct: 771 LAYSTLEHGTSLKTLYRKSASLDSPVLLVIK-----------DMDNQIFGAYATHPFRFS 819
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D +YG+ LY SP F VF SG+ F+
Sbjct: 820 DHYYGTGETFLYTFSPNFKVFKWSGENTYFI 850
>sp|Q8NI08|NCOA7_HUMAN Nuclear receptor coactivator 7 OS=Homo sapiens GN=NCOA7 PE=1 SV=2
Length = 942
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 12/91 (13%)
Query: 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK 375
L Y + HG L + P+L+++ I GA F+
Sbjct: 806 LAYSTLEHGTSLKTLYRKSASLDSPVLLVIK-----------DMDNQIFGAYATHPFKFS 854
Query: 376 DVFYGSSGN-LYAISPTFHVFLPSGKEKNFV 405
D +YG+ LY SP F VF SG+ F+
Sbjct: 855 DHYYGTGETFLYTFSPHFKVFKWSGENSYFI 885
>sp|Q0IID2|CT118_BOVIN Uncharacterized protein C20orf118 homolog OS=Bos taurus PE=2 SV=1
Length = 217
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 315 NLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFEN 374
+L + +S G L + +EG+ GP+L+++ G + GA +
Sbjct: 80 SLAFCTSRDGFSLQSLYRQMEGHSGPVLLVLRDQDGQ-----------MFGAFSSSALRL 128
Query: 375 KDVFYGSSGN-LYAISPTFHVFLPSGKEKNFVYSHL 409
FYG+ L++ SP VF +G FV L
Sbjct: 129 SKGFYGTGETFLFSFSPQLKVFKWTGSNSFFVKGDL 164
>sp|Q5M7W6|ITFG3_RAT Protein ITFG3 OS=Rattus norvegicus GN=Itfg3 PE=1 SV=1
Length = 552
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 314 ENLLYRSS----LHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGA 366
EN+L RS+ LH G R+ N+ G G L+LVS+ D + +W +GA
Sbjct: 310 ENMLNRSAHRRLLHSSGAVRYLMNVPGKTGQDLLLVSSEDCKLLDGQDLVPRWTLGA 366
>sp|Q06FW9|RPOB_PELHO DNA-directed RNA polymerase subunit beta OS=Pelargonium hortorum
GN=rpoB PE=3 SV=1
Length = 1079
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 18/129 (13%)
Query: 389 SPTFHVFLPSGKEKNFVYSHLHPSGRVY----------EPHPKPVGIAFGGTMGNERIFI 438
S T+H+ P KE++ Y L S ++Y P K + I M + FI
Sbjct: 59 SKTYHLVKPLIKERDARYESLTYSSKLYVSAGFLWKDKRPQKKTICIGNLPLMNSVGTFI 118
Query: 439 DEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMSYKKRE 498
+RV + +GS + +QGF + I I W GGR +++ K+E
Sbjct: 119 VNGISRVVINQILQSPGIYYGSELDYQGFTVYIATI--ISDW--GGR----LKLEIDKKE 170
Query: 499 ELFTEQRRK 507
++ RK
Sbjct: 171 RIWARVSRK 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,122,975
Number of Sequences: 539616
Number of extensions: 8634802
Number of successful extensions: 17267
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 17245
Number of HSP's gapped (non-prelim): 45
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)