Query 009243
Match_columns 539
No_of_seqs 249 out of 638
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 22:10:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009243.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009243hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4636 Uncharacterized conser 100.0 1.4E-83 3.1E-88 652.6 24.0 479 1-539 1-483 (483)
2 KOG2557 Uncharacterized conser 100.0 9.2E-47 2E-51 384.3 21.3 412 1-537 1-422 (427)
3 smart00584 TLDc domain in TBC 100.0 3.8E-36 8.2E-41 283.9 17.3 162 278-483 2-165 (165)
4 KOG2372 Oxidation resistance p 100.0 9.3E-32 2E-36 260.9 14.1 164 275-483 74-241 (241)
5 PF07534 TLD: TLD; InterPro: 100.0 2.8E-28 6.1E-33 220.3 13.8 137 316-483 1-139 (139)
6 COG5142 OXR1 Oxidation resista 99.9 3.4E-23 7.3E-28 193.6 10.5 165 275-483 32-212 (212)
7 KOG2801 Probable Rab-GAPs [Int 99.7 1.6E-18 3.4E-23 174.4 -4.6 162 303-486 355-557 (559)
8 KOG0034 Ca2+/calmodulin-depend 97.4 0.0029 6.3E-08 61.7 12.7 170 1-238 1-180 (187)
9 KOG0044 Ca2+ sensor (EF-Hand s 96.3 0.013 2.8E-07 57.5 7.8 140 63-245 38-187 (193)
10 COG5126 FRQ1 Ca2+-binding prot 94.9 0.14 3.1E-06 48.9 8.7 97 31-163 22-119 (160)
11 PTZ00183 centrin; Provisional 93.1 0.83 1.8E-05 41.5 9.9 100 31-164 19-118 (158)
12 PF09069 EF-hand_3: EF-hand; 87.3 1.9 4.1E-05 37.5 6.3 66 149-237 15-80 (90)
13 KOG0037 Ca2+-binding protein, 85.7 14 0.00031 37.1 12.3 112 12-164 41-152 (221)
14 PTZ00184 calmodulin; Provision 84.1 8.3 0.00018 34.2 9.2 101 30-164 12-112 (149)
15 KOG0027 Calmodulin and related 76.9 9.2 0.0002 35.4 7.2 105 28-166 7-115 (151)
16 KOG0038 Ca2+-binding kinase in 70.0 24 0.00053 33.6 8.0 126 64-237 51-181 (189)
17 PF13499 EF-hand_7: EF-hand do 54.9 17 0.00037 28.3 3.6 58 145-230 9-66 (66)
18 PTZ00184 calmodulin; Provision 51.8 86 0.0019 27.6 8.2 98 29-163 47-147 (149)
19 PF13202 EF-hand_5: EF hand; P 50.7 11 0.00023 24.8 1.5 18 145-162 8-25 (25)
20 PF13405 EF-hand_6: EF-hand do 49.9 21 0.00045 24.1 2.9 18 146-163 10-27 (31)
21 KOG0031 Myosin regulatory ligh 49.1 40 0.00087 32.5 5.6 127 47-231 30-164 (171)
22 PLN02964 phosphatidylserine de 46.1 51 0.0011 38.3 7.0 51 93-164 193-243 (644)
23 PF00036 EF-hand_1: EF hand; 45.1 14 0.00031 25.1 1.5 20 145-164 9-28 (29)
24 cd05027 S-100B S-100B: S-100B 41.6 1.3E+02 0.0028 25.6 7.3 21 147-167 20-41 (88)
25 cd05026 S-100Z S-100Z: S-100Z 41.6 1.5E+02 0.0032 25.3 7.6 21 146-166 21-42 (93)
26 PF13833 EF-hand_8: EF-hand do 40.0 64 0.0014 24.1 4.6 49 94-163 3-52 (54)
27 cd00213 S-100 S-100: S-100 dom 36.2 2.5E+02 0.0053 23.2 8.1 17 148-164 22-38 (88)
28 PF13499 EF-hand_7: EF-hand do 35.1 74 0.0016 24.6 4.5 51 94-161 15-65 (66)
29 COG5485 Predicted ester cyclas 35.1 49 0.0011 30.6 3.7 17 476-492 114-130 (131)
30 cd05025 S-100A1 S-100A1: S-100 32.2 2.8E+02 0.0061 23.2 7.9 19 146-164 20-39 (92)
31 KOG0036 Predicted mitochondria 32.0 1.5E+02 0.0033 32.8 7.4 113 79-249 51-163 (463)
32 PTZ00183 centrin; Provisional 31.8 2.5E+02 0.0055 25.0 8.0 50 93-163 104-153 (158)
33 cd00051 EFh EF-hand, calcium b 28.6 1.7E+02 0.0037 20.8 5.3 48 94-162 15-62 (63)
34 cd05030 calgranulins Calgranul 26.8 1.8E+02 0.004 24.4 5.8 54 94-167 25-82 (88)
35 cd05030 calgranulins Calgranul 26.7 3E+02 0.0064 23.2 7.0 35 115-164 4-38 (88)
36 TIGR03581 EF_0839 conserved hy 26.5 1.1E+02 0.0025 31.0 5.0 60 122-192 166-230 (236)
37 cd00213 S-100 S-100: S-100 dom 25.8 2.3E+02 0.0049 23.4 6.1 55 93-167 24-82 (88)
38 smart00054 EFh EF-hand, calciu 23.9 58 0.0013 19.4 1.7 20 145-164 9-28 (29)
39 KOG4286 Dystrophin-like protei 23.2 87 0.0019 36.9 3.9 34 193-237 552-585 (966)
40 KOG2643 Ca2+ binding protein, 22.2 37 0.0008 37.6 0.8 69 75-163 383-452 (489)
41 PF14658 EF-hand_9: EF-hand do 20.9 2.9E+02 0.0063 22.8 5.5 57 88-163 6-63 (66)
No 1
>KOG4636 consensus Uncharacterized conserved protein with TLDc domain [Function unknown]
Probab=100.00 E-value=1.4e-83 Score=652.60 Aligned_cols=479 Identities=31% Similarity=0.440 Sum_probs=430.3
Q ss_pred CCCCCCCCCCCCcchhhHhHhhhhcCChhhHHHHhhcccCCCCCcccchhhhhhhccccCCccccCC-CCCchHHHHHhh
Q 009243 1 MGASSSTQQHPPSEQSEVESLAASTGALPLLQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETP-KVADSFRVLLDN 79 (539)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (539)
|||||||.-+.|+|.| +|||+||++..|+||.|.++|+||.+++++-|.+.++-..-|+. .+.|-|+.+|.|
T Consensus 1 MGasSStddkesSEkr-------stGalP~kk~~q~klvDa~~ntV~d~slkh~~~~~t~~~gse~e~as~d~~ekylt~ 73 (483)
T KOG4636|consen 1 MGASSSTDDKESSEKR-------STGALPMKKIIQKKLVDAIMNTVNDSSLKHKSDVKTEKVGSEIEKASNDTLEKYLTR 73 (483)
T ss_pred CCCCCCCCcccccCCC-------CCCCccHHHHHHhhhhhhhcCCCCccccccccCceehhhhhhhhhhcchhHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999998888885 679999999999
Q ss_pred hhhhhhhhccccCCCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHH
Q 009243 80 LGPSIADLFFVPEKGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVL 159 (539)
Q Consensus 80 l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~ 159 (539)
|+.++||.+|.+++++..|++|+. |..||+|+.-.|.-|.++++++.+.+.+++...++|++| .||+|.+.++..++.
T Consensus 74 l~sSlvdg~n~i~ae~l~sv~fas-Y~dl~grl~n~m~~nt~~~~v~~~q~~~~F~p~~~~ssd-~dcyIk~~~~vsev~ 151 (483)
T KOG4636|consen 74 LSSSLVDGKNEISAEKLKSVEFAS-YQDLSGRLMNYMTGNTNSNLVTHQQFMDKFTPLYGTSSD-TDCYIKILQPVSEVH 151 (483)
T ss_pred HhhhhhccccccchhheeeeechH-HHHHHHHHHHhhccCchhhhhhhHHhhhccCccccCCcc-cceEEEEeechhHHH
Confidence 999999999999999999999999 999999999999999999999998889999999999999 999999999999999
Q ss_pred HHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCc--cccccccccCCcccchhhHHHHHhhhCCCc
Q 009243 160 MIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDV--NFWDCNISDLEIQLPVGKFLTWTLTTVPSL 237 (539)
Q Consensus 160 ~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~--~~~~~~~~~~~~~is~~~F~~wi~~~~P~l 237 (539)
++|++||.|||.++. ..++|..++++-+.+.+++..|-+++++. ..|.++.. .+-.+.+++|+.|...++|++
T Consensus 152 ~fL~vC~t~a~~gra----~~~~c~fi~~~~~~~t~~~~~c~dS~Sgnsi~rW~~~n~-~~l~l~vgKfltwaLmTvpcl 226 (483)
T KOG4636|consen 152 HFLKVCSTSAGAGRA----IQGDCQFIKILVEEMTDGKTGCEDSQSGNSIIRWRRENC-EKLTLAVGKFLTWALMTVPCL 226 (483)
T ss_pred HHHHHHHhhhcCCch----hhcCCcHHHHHHHHHhcccccccccccCCceeeehhhhh-HHHHHHHHHHHHHHhhccchh
Confidence 999999999998774 23478888888888888888888777654 44988855 667889999999999999999
Q ss_pred hhHHHHHHHHhhccCccCCCCCCCCCCCCCCCCCCcccCCCccCchHHHHhhhcccCcchHhHHhhcCCCCCCCCCceEE
Q 009243 238 TDCFTQFVYARLQSCVTSENPSEISTSSFGDISSTKAQDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAEENLL 317 (539)
Q Consensus 238 ~~~l~~~~~h~L~s~~~~~~~~~~~~~p~~~~~~~~~~~~~LL~~~~~w~Ls~~lp~~~~~~iLs~~lP~~~~~~~w~LL 317 (539)
..+.+++....|..+.+..+. ++ +...+........-.|++.+++|+|+.++|..++++||. +.|....-..|+||
T Consensus 227 tEcqn~~c~~~lqt~~~aedn--Ps-stavD~S~skTsed~L~plgqaW~l~~slp~~ys~eil~-~pp~tsGeshwtlL 302 (483)
T KOG4636|consen 227 TECQNRVCSAVLQTKIIAEDN--PS-STAVDYSSSKTSEDILSPLGQAWYLQSSLPAVYSPEILA-KPPETSGESHWTLL 302 (483)
T ss_pred hhhhhhhhcceecceeecccC--CC-ccccccccccccchhhhhHHHHHHHhccCCcccCchhcc-CCCCCCCCCceeec
Confidence 999999999999988764431 11 233455444555667889999999999999999999994 78888778889999
Q ss_pred EecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCCcccccccceEEEeeecCCcccCCccccCCc-eEEEEcCCeeeec
Q 009243 318 YRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAISPTFHVFL 396 (539)
Q Consensus 318 YSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~~~~~~~~~~vFGay~s~~Wk~s~~ffG~~e-fLFqL~P~~~vf~ 396 (539)
|.|.+||.++|||+++|++|+||||+|+++++. +++|+ -+++.|++++.+||.+. ++|++.|+|+++.
T Consensus 303 Y~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkde---------r~~vi--A~~qew~e~~~~fgG~~~~~f~i~P~f~~~~ 371 (483)
T KOG4636|consen 303 YTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDE---------RVVVI--AADQEWRESGNRFGGTFTSFFEIVPNFRRID 371 (483)
T ss_pred chhhhhccchhhHHHHhccccCCeEEEEEecCC---------cEEEE--eechhhhhhccccccccceeEEeecceEEec
Confidence 999999999999999999999999999999884 46666 46999999998887777 9999999999999
Q ss_pred cCCCCCceEEeccCCCCCccCCCCCCceEEECCCCCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeE
Q 009243 397 PSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILE 476 (539)
Q Consensus 397 ~tg~n~n~vY~nt~~~~r~y~~~~~~~GIgfGG~~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~I~~ 476 (539)
...|++|||++. |+| |.||+||+.+|++.|.||++|++-++. +....|.+
T Consensus 372 ---~s~N~~Y~nl~~--rg~-----p~Gl~fg~tlgne~i~idedF~kItvl--------------------pveA~ild 421 (483)
T KOG4636|consen 372 ---GSANSIYCNLKL--RGS-----PYGLSFGNTLGNEEIKIDEDFDKITVL--------------------PVEAEILD 421 (483)
T ss_pred ---CCCceEEEeccc--cCC-----ccceecCCCCCCceeeeccchhhcccc--------------------chhcceee
Confidence 448999999975 444 999999999999999999999987652 34578999
Q ss_pred EEEEeecCcchHHHHHHHHhhHHHHHHhhcccCccccCCCCCccchhhhcccCCCCccccccC
Q 009243 477 IEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSDPNAVRREDR 539 (539)
Q Consensus 477 IEVWG~g~~~~~e~Q~~~~~wE~~eae~rRkVdl~~~~~w~d~~dRaLLEMaG~~~~~~re~r 539 (539)
||||||||.+++|.|+++++||++++||||+|+|+. .+|+|+|||+||||||.+|+++||+|
T Consensus 422 IEvWGcgg~~~re~Qqk~kkwq~~~te~~r~v~L~~-~tW~D~Pdk~llem~G~qn~~~~~~~ 483 (483)
T KOG4636|consen 422 IEVWGCGGAGTREDQQKLKKWQKQQTEKHRRVPLPG-NTWDDNPDKTLLEMAGFQNSTERAQM 483 (483)
T ss_pred EEEeccCCcccHHHHHHHHHHHHHHHhhcccccCCC-CccccChHHHHHHHhCCCCCchhccC
Confidence 999999999999999999999999999999999984 45999999999999999999999997
No 2
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=100.00 E-value=9.2e-47 Score=384.28 Aligned_cols=412 Identities=19% Similarity=0.290 Sum_probs=302.5
Q ss_pred CCCCCCCCCCCCcchhhHhHhhhhcCChhhHHHHhhccc-CCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhh
Q 009243 1 MGASSSTQQHPPSEQSEVESLAASTGALPLLQNAFSKLA-HPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDN 79 (539)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (539)
|||++|..+.-..++.| ..+ +|--+.+.|+..| +-+||+. .-+ -.+ +..-.-
T Consensus 1 mgn~n~kr~~~~~~naE--~~~----~l~~~kk~~~~ga~~k~t~dq-------~v~----------~~~----~~~~~~ 53 (427)
T KOG2557|consen 1 MGNSNSKRVDHRFINAE--TQK----KLDDLKKLFVSGASNKQTNDQ-------YVS----------YPV----FQEYFG 53 (427)
T ss_pred CCCcccccccccccCHH--HHH----HHHHHhhccccccchhhhhhh-------hhh----------ccc----ccchhh
Confidence 89999988775566555 222 1233444555544 4444421 000 000 001156
Q ss_pred hhhhhhhhccccCC-----CCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccC
Q 009243 80 LGPSIADLFFVPEK-----GGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLR 154 (539)
Q Consensus 80 l~~~~~~~~f~~~~-----~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~ 154 (539)
|+.++....|.+.+ ..+...+++..+... +++...+...+|+-. .|++++|...
T Consensus 54 l~e~~~q~~f~~vk~~~q~~~~~l~k~~~~~~~~-~~gt~dq~a~mL~~~--------------------~~~sgn~~~~ 112 (427)
T KOG2557|consen 54 LSESLGQRMFDMVKQRRQDDKMTLEKLVIAKATY-EKGTDDQIAEMLYQT--------------------LDVNGNGVLS 112 (427)
T ss_pred hhhhccceEeeeccCccCCccchHHHHhhHHhhh-ccCcccHHHHHHHHH--------------------Hhhccccccc
Confidence 78888899999985 358999999999999 999999999999932 3778888999
Q ss_pred hHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHH-HHHhhhhcCCCccccccccccCCcccchhhHHHHHhhh
Q 009243 155 PIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLS-AVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTT 233 (539)
Q Consensus 155 ~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~s-av~s~~~~~~~~~~~~~~~~~~~~~is~~~F~~wi~~~ 233 (539)
.+++.+++..+++....+....-... +...-.- ...++-.+++ .....++..++.|++|++ .
T Consensus 113 ~~q~eQ~~~~vlks~~~~ess~~es~--------~~~~~d~af~~~~~~~ke--------~e~t~p~~~le~~~s~~p-~ 175 (427)
T KOG2557|consen 113 RSQLEQFLVVVLKSVFSTESSDAESS--------DYKKMDDAFLNAATFSKE--------DEGTEPGMSLEDFRSWCP-F 175 (427)
T ss_pred hhHHHHHHHHHhhheeeecccchhhh--------hhhhhhccccchhhhccc--------cccCCCchhHHHHhhhch-H
Confidence 99999999999999886433221111 1101011 1111112222 123467788888888876 3
Q ss_pred CCCchhHHHHHHHHhhccCccCCCCCCCCCCCCCCCCCCcccCCCccCchHHHHhhhcccCcchHhHHhhcCCCCCCCCC
Q 009243 234 VPSLTDCFTQFVYARLQSCVTSENPSEISTSSFGDISSTKAQDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAE 313 (539)
Q Consensus 234 ~P~l~~~l~~~~~h~L~s~~~~~~~~~~~~~p~~~~~~~~~~~~~LL~~~~~w~Ls~~lp~~~~~~iLs~~lP~~~~~~~ 313 (539)
+|.+ .+++...|+.+...-+ ....|.+...+...+...++....+|+|...|| +.+..+
T Consensus 176 f~~i----~r~~fs~L~~~~g~sk---~pil~~l~~~~~~sh~~~~i~~~~~l~in~~lp--------------~~~r~~ 234 (427)
T KOG2557|consen 176 FPTI----RKFLFSLLMPPSGVSK---GPILPHLLYEDSVSHDRLLIKKEYALHINGALP--------------HHERVE 234 (427)
T ss_pred HHHH----HHHHHHHhccccCCcc---CccccccccccccccccceeecchhheecccCC--------------cchhhc
Confidence 3343 4666666665543321 122344555566777888899999999988665 226678
Q ss_pred ceEEEecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCCcccccccceEEEeeecCCcccCCccccCCc-eEEEEcCCe
Q 009243 314 ENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAISPTF 392 (539)
Q Consensus 314 w~LLYSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~~~~~~~~~~vFGay~s~~Wk~s~~ffG~~e-fLFqL~P~~ 392 (539)
|++||+++.||.|+++|+.++.+ +||+++||+++++ +|||+|++++|...+.|+||.+ |||||.|.+
T Consensus 235 wr~lysss~~gqsfSt~l~~~~~-~gp~v~vI~d~d~-----------~vFGgyASq~we~~pQF~Gd~~~fLfqL~Pkm 302 (427)
T KOG2557|consen 235 WKLLYSSSVHGQSFSTFLGHTSG-MGPSVLIIKDTEG-----------YVFGGYASQPWERYPQFYGDMKSFLFQLNPKM 302 (427)
T ss_pred eeeeeeecccccchhhhhhhccC-CCCeEEEEEcCCC-----------ceecccccCcccccCccCCccceeeeeecchh
Confidence 99999999999999999999996 9999999999996 7999999999999999999999 999999999
Q ss_pred eeeccCCCCCceEEeccCCCCCccCCCCCCceEEECCCCCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcce
Q 009243 393 HVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVES 472 (539)
Q Consensus 393 ~vf~~tg~n~n~vY~nt~~~~r~y~~~~~~~GIgfGG~~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F 472 (539)
.||++||.|+||+|+|.. +++.|+||||||+...++||||.+|..|++ ...|+||+++.|+. +++|
T Consensus 303 a~y~aTgyn~~yqylN~~-------QQtiPNGLGmGGq~n~fgL~Id~sFg~Gqs--~e~cTty~spqLSk-----~~~f 368 (427)
T KOG2557|consen 303 AIYRATGYNTNYQYLNFT-------QQTIPNGLGMGGQINHFGLFIDASFGQGQS--FECCTTYESPQLSK-----TSRF 368 (427)
T ss_pred eeecccCCccceEEeccc-------cccCCCccccCcccceeeEEEEeecCCCcc--ccccccCCCccccc-----cccc
Confidence 999999999999999864 467899999999999999999999999987 56789998888876 4689
Q ss_pred eEeEEEEEeecCcchHHHHHHHHhhHHHHHHhhcccCccccCCCCCccchhhhcccCCCCccc--cc
Q 009243 473 LILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSDPNAVR--RE 537 (539)
Q Consensus 473 ~I~~IEVWG~g~~~~~e~Q~~~~~wE~~eae~rRkVdl~~~~~w~d~~dRaLLEMaG~~~~~~--re 537 (539)
+|..||||++|+.... +|++ +.-+.++-.+|. |.+||||||+||+...++ ||
T Consensus 369 qi~~iEvWavgD~p~e-Eq~e-----kgn~~kkSvLD~-------dpEdrAmLElaGksmhSeglRe 422 (427)
T KOG2557|consen 369 QIEVIEVWAVGDAPNE-EQDE-----KGNAMKKSVLDR-------DPEDRAMLELAGKSMHSEGLRE 422 (427)
T ss_pred cceEEEEEecCCCcch-hhhh-----ccCccccccccC-------CHHHHHHHHHhccccccccccC
Confidence 9999999999997665 3432 222323444465 669999999999987775 55
No 3
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=100.00 E-value=3.8e-36 Score=283.87 Aligned_cols=162 Identities=33% Similarity=0.589 Sum_probs=142.6
Q ss_pred CccCchHHHHhhhcccCcchHhHHhhcCCCCCCCCCceEEEecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCCcccc
Q 009243 278 HLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHET 357 (539)
Q Consensus 278 ~LL~~~~~w~Ls~~lp~~~~~~iLs~~lP~~~~~~~w~LLYSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~~~~~ 357 (539)
.||++..+..|.. +||.+.+..+|+|||++++||+|+++|+++|.++++|||||||++++
T Consensus 2 ~iL~~~~~~~l~~-------------~lP~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~------- 61 (165)
T smart00584 2 SILSEEILALINS-------------HLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDG------- 61 (165)
T ss_pred ccCCHHHHHHHHH-------------hCCHhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCC-------
Confidence 4677777666665 45556566679999999999999999999999999999999999986
Q ss_pred cccceEEEeeecCCcccCCccccCCc-eEEEEcCCeeeeccCCCCC-ceEEeccCCCCCccCCCCCCceEEECCCCCCcc
Q 009243 358 SARKWIIGALTQQGFENKDVFYGSSG-NLYAISPTFHVFLPSGKEK-NFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNER 435 (539)
Q Consensus 358 ~~~~~vFGay~s~~Wk~s~~ffG~~e-fLFqL~P~~~vf~~tg~n~-n~vY~nt~~~~r~y~~~~~~~GIgfGG~~g~~~ 435 (539)
.|||||++++|+.+..|||+++ |||+|.|++++|+|++.|+ .|+++ .+++|+|||+.++++
T Consensus 62 ----~ifGaf~~~~w~~~~~~~G~~~sFLF~l~p~~~~y~~~~~n~~~~~~~-------------~~~~~~~Ggg~g~~~ 124 (165)
T smart00584 62 ----EVFGAYASQAWRVSDHFYGTGESFLFQLNPKFVVYDWTGKNKYYYING-------------TPDSLPIGGGGGGFG 124 (165)
T ss_pred ----CEEEEEcCCCCccCCcEECCCCeEEEEEcCCceEEcccccCcEEEEec-------------CCCeEeecCCCCcee
Confidence 6999999999999999999999 9999999999999999886 56664 267999999988899
Q ss_pred EEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 009243 436 IFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483 (539)
Q Consensus 436 L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~I~~IEVWG~g 483 (539)
||||++|++|++.| |.||++++|.+. ..+|+|.+|||||+|
T Consensus 125 l~id~~l~~g~s~~---~~tf~~~~L~~~----~~~f~I~~iEVw~~g 165 (165)
T smart00584 125 LWIDEDLNHGSSSH---CKTFGNPPLSTK----QEDFLILDIEVWGFG 165 (165)
T ss_pred EEEehhhCCeEeCC---CCCcCCccccCC----CCCEEEEEEEEEecC
Confidence 99999999999754 999999999863 367999999999997
No 4
>KOG2372 consensus Oxidation resistance protein [Replication, recombination and repair]
Probab=99.97 E-value=9.3e-32 Score=260.93 Aligned_cols=164 Identities=23% Similarity=0.477 Sum_probs=147.9
Q ss_pred cCCCccCchHHHHhhhcccCcchHhHHhhcCCCCCCCC-CceEEEecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCC
Q 009243 275 QDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEA-EENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDAS 353 (539)
Q Consensus 275 ~~~~LL~~~~~w~Ls~~lp~~~~~~iLs~~lP~~~~~~-~w~LLYSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~ 353 (539)
..+.||++.++-+|. ..||.+.+.. +|+++||+.+||+|+++||+++.....|.||+||+++|+
T Consensus 74 ~~~~ll~~~~~~~l~-------------e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~-- 138 (241)
T KOG2372|consen 74 YKSQLLTPEMIRQLR-------------EHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGD-- 138 (241)
T ss_pred cccccCCHHHHHHHH-------------hhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCC--
Confidence 355677776655443 4678888877 899999999999999999999999999999999999985
Q ss_pred cccccccceEEEeeecCCcccCCccccCCc-eEEEEcC--CeeeeccCCCCCceEEeccCCCCCccCCCCCCceEEECCC
Q 009243 354 DHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAISP--TFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGT 430 (539)
Q Consensus 354 ~~~~~~~~~vFGay~s~~Wk~s~~ffG~~e-fLFqL~P--~~~vf~~tg~n~n~vY~nt~~~~r~y~~~~~~~GIgfGG~ 430 (539)
|||||++++.+.+.+|||+++ |||++.| ++.+|+|||.|..|+||. +..|+|||+
T Consensus 139 ---------vFGa~~~~~i~p~dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~-------------~dfLa~G~G 196 (241)
T KOG2372|consen 139 ---------VFGAFVSDAIRPNDHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCD-------------KDFLAFGGG 196 (241)
T ss_pred ---------EeeEeeccceeccCCcCCCCCeEEEEecCCCceeEeeecCCcceEEEec-------------hhHhhhcCC
Confidence 999999999999999999999 9999999 899999999999999994 567999999
Q ss_pred CCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 009243 431 MGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483 (539)
Q Consensus 431 ~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~I~~IEVWG~g 483 (539)
.|+++||||++|..|. +..|.||+|-+|++. .+|.|++||+|+++
T Consensus 197 gGRfgLwLD~dL~~G~---S~~ceTFgN~~Ls~~-----qdF~Iq~lElW~f~ 241 (241)
T KOG2372|consen 197 GGRFGLWLDGDLLHGS---SHPCETFGNEPLSDK-----QDFIIQDLELWGFE 241 (241)
T ss_pred CCceEEEecccccccc---cCCCcccCCcccCCc-----CceEEEEEEEEeeC
Confidence 9999999999999998 678999999999973 57999999999984
No 5
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.95 E-value=2.8e-28 Score=220.34 Aligned_cols=137 Identities=35% Similarity=0.630 Sum_probs=96.0
Q ss_pred EEEecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCCcccccccceEEEeeecCCcccCCc-cccCCc-eEEEEcCCee
Q 009243 316 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENKDV-FYGSSG-NLYAISPTFH 393 (539)
Q Consensus 316 LLYSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~~~~~~~~~~vFGay~s~~Wk~s~~-ffG~~e-fLFqL~P~~~ 393 (539)
|||++++||+|+++|+++|. +++|||+||++.++ .|||+|++++|+.+.. ++|+.+ |||+|.|.++
T Consensus 1 Lly~s~~dG~s~~~f~~~~~-~~~~~l~iv~t~~g-----------~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~ 68 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCD-GKGPTLLIVKTSDG-----------QIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFK 68 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHT-T-S-EEEEEEETTS------------EEEEEESS-----SS--B--TT-EEEE-SSS-E
T ss_pred CcCccchhCcCHHHHHHhcC-CCCCEEEEEECCCC-----------cEEEEEeCCcccccCccccCCCCeEEEEeccccc
Confidence 79999999999999999999 68999999999996 6999999999998764 999999 9999999999
Q ss_pred eeccCCCCCceEEeccCCCCCccCCCCCCceEEECCCCCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCccee
Q 009243 394 VFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESL 473 (539)
Q Consensus 394 vf~~tg~n~n~vY~nt~~~~r~y~~~~~~~GIgfGG~~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~ 473 (539)
+|+|+++|..|+|++ ..||+||++.++++||||.+++++++++ +.||+++.+.+. .+.+|+
T Consensus 69 ~~~~~~~~~~~~~~~-------------~~~~~fG~~~~~~~l~i~~~~~~~~~~~---~~ty~~~~l~~~---~~~~f~ 129 (139)
T PF07534_consen 69 IFKWTGKNQNYINCN-------------NQGLGFGGGSNGFDLWIDSDFNSGSSSH---SETYGNPPLSND---GQESFD 129 (139)
T ss_dssp EEE--SS----EEEE-------------TTEEEES-SSSS-SEEEETTS-EEEE-----BTTTTB--SS-----SSSEEE
T ss_pred eeecccccceeeecc-------------CCcceEeecCCceEEEEeCCCCcEEEeC---CCccCCCcccCC---CCCCcE
Confidence 999988888888764 4589999987789999999999998754 699999999852 147899
Q ss_pred EeEEEEEeec
Q 009243 474 ILEIEVWGIG 483 (539)
Q Consensus 474 I~~IEVWG~g 483 (539)
|.+||||+||
T Consensus 130 i~~iEV~~~g 139 (139)
T PF07534_consen 130 IDEIEVWGLG 139 (139)
T ss_dssp EEEEEEEE--
T ss_pred EEEEEEEEEC
Confidence 9999999997
No 6
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.89 E-value=3.4e-23 Score=193.65 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=141.0
Q ss_pred cCCCccCchHHHHhhhcccCcchHhHHhhcCCCCCC-CCCceEEEecCCcchhHHHHHHHhcccCCC-----EEEEEEcC
Q 009243 275 QDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGE-EAEENLLYRSSLHGRGLNRFWSNIEGYHGP-----LLILVSAN 348 (539)
Q Consensus 275 ~~~~LL~~~~~w~Ls~~lp~~~~~~iLs~~lP~~~~-~~~w~LLYSS~~hG~S~~~f~~kv~~~~gP-----TLLLIk~~ 348 (539)
.+..||++..+-.|-..|| .+.. ...|+||||..+||+|+++|+..+.....| .||.||++
T Consensus 32 ~K~~llt~e~~~~ire~lp-------------~Ry~~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~ 98 (212)
T COG5142 32 YKASLLTEEIVTRIRESLP-------------DRYKYSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDK 98 (212)
T ss_pred hhcccCCHHHHHHHHHhhh-------------HHHHHHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcC
Confidence 3566888877776665444 4443 235999999999999999999999887778 99999999
Q ss_pred CCCCCcccccccceEEEeeecCCcccCCccccCCc-eEEEE--cC-------CeeeeccCCCCCceEEeccCCCCCccCC
Q 009243 349 SGDASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAI--SP-------TFHVFLPSGKEKNFVYSHLHPSGRVYEP 418 (539)
Q Consensus 349 ~g~~~~~~~~~~~~vFGay~s~~Wk~s~~ffG~~e-fLFqL--~P-------~~~vf~~tg~n~n~vY~nt~~~~r~y~~ 418 (539)
+|+ +||||.++..+....|||+++ |||++ .| ++.+|+-+|.+..-+||.
T Consensus 99 dgd-----------~FGaf~~d~~~pa~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt---------- 157 (212)
T COG5142 99 DGD-----------LFGAFFEDRIRPARHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCT---------- 157 (212)
T ss_pred CCC-----------EeeeechhheeccCCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEc----------
Confidence 986 999999999999989999999 99999 55 588999998888889993
Q ss_pred CCCCceEEECCCCCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 009243 419 HPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 483 (539)
Q Consensus 419 ~~~~~GIgfGG~~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~I~~IEVWG~g 483 (539)
+.-++|||+.|+++||||.+|+.|. +..+.||+|-.|+..- ..|.|..||||-++
T Consensus 158 ---~~FlafG~g~grygLl~d~sLl~g~---S~p~~tfgN~~Ls~~g----~~f~Iv~lElW~v~ 212 (212)
T COG5142 158 ---PDFLAFGCGGGRYGLLIDKSLLDGE---SHPVETFGNCLLSSKG----HFFRIVYLELWLVQ 212 (212)
T ss_pred ---hHHhhhcCCCCcEEEEecCcccccc---cCCCccccccccccCC----CceEEEEEEEEeeC
Confidence 6689999999999999999999997 5679999999997632 24899999999875
No 7
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.67 E-value=1.6e-18 Score=174.42 Aligned_cols=162 Identities=23% Similarity=0.357 Sum_probs=130.0
Q ss_pred hcCCCCCCCCCceEEEecCCcchhHHHHHHHhcccCCCEEEEEEcCCCCCCcccccccceEEEeeecCCcccC------C
Q 009243 303 LCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENK------D 376 (539)
Q Consensus 303 ~~lP~~~~~~~w~LLYSS~~hG~S~~~f~~kv~~~~gPTLLLIk~~~g~~~~~~~~~~~~vFGay~s~~Wk~s------~ 376 (539)
.|+|.+....++-+||||-+||+|+.+||-.+.+ +.||+|+|+++. +.|-|+|.+..|.+. -
T Consensus 355 swvperfalcqplllfsslqhgyslarfyfqceg-heptllliktmq-----------kevcgaylstdwsernkfggkl 422 (559)
T KOG2801|consen 355 SWVPERFALCQPLLLFSSLQHGYSLARFYFQCEG-HEPTLLLIKTMQ-----------KEVCGAYLSTDWSERNKFGGKL 422 (559)
T ss_pred HhhhHHHhhhhHHHHHHHhhcchhhhhheeeccC-CCCeeehHHHHH-----------HHHhhHhcccchhhhcccCcee
Confidence 5999999999999999999999999999999998 789999999998 569999999999875 2
Q ss_pred ccccCCc-eEEEEcCCeeeeccCC-------CCCceE---------------------------EeccCCCCCccCCCCC
Q 009243 377 VFYGSSG-NLYAISPTFHVFLPSG-------KEKNFV---------------------------YSHLHPSGRVYEPHPK 421 (539)
Q Consensus 377 ~ffG~~e-fLFqL~P~~~vf~~tg-------~n~n~v---------------------------Y~nt~~~~r~y~~~~~ 421 (539)
.|||+++ |+|+|.|+.+-|.|.- +....| -||..+....+.+.+-
T Consensus 423 gffgtgecfvfrlqpevqryewvvikhpeltkppplmaaeptaplshsassdpadrlspflaarhfnlpsktesmfmagg 502 (559)
T KOG2801|consen 423 GFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADRLSPFLAARHFNLPSKTESMFMAGG 502 (559)
T ss_pred cccccccEEEEEechhhheeeEEEEcCcccCCCCCcccCCCCCCCCccccCCchhhcChHHHHHhcCCCcchhHHHhcCC
Confidence 6899999 9999999999888751 111111 1222222222223445
Q ss_pred CceEEECCCCCCccEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeecCcc
Q 009243 422 PVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRS 486 (539)
Q Consensus 422 ~~GIgfGG~~g~~~L~ID~~Le~gt~r~~~~~~TF~~G~L~p~~~f~~~~F~I~~IEVWG~g~~~ 486 (539)
.+.+..||+ |+.+||||.++..|. ++.|.||+|.+|.. ++|.|..||.||+.+.+
T Consensus 503 sdclivggg-ggqalyidgdlnrgr---tshcdtfnnqplcs------enfliaaveawgfqdpd 557 (559)
T KOG2801|consen 503 SDCLIVGGG-GGQALYIDGDLNRGR---TSHCDTFNNQPLCS------ENFLIAAVEAWGFQDPD 557 (559)
T ss_pred CceEEEcCC-CceeEEecccccCCc---cccccccCCCccch------hhHHHHHHHHhcCCCCC
Confidence 677888887 568999999999997 45599999999976 57999999999998764
No 8
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.36 E-value=0.0029 Score=61.73 Aligned_cols=170 Identities=22% Similarity=0.235 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCCcchhhHhHhhhhcC--------ChhhHHHHhhcccCC-CCCcccchhhhhhhccccCCccccCCCCCc
Q 009243 1 MGASSSTQQHPPSEQSEVESLAASTG--------ALPLLQNAFSKLAHP-QTSTLPLQSLQQCFSLNYDNLICETPKVAD 71 (539)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (539)
||+.+|+.-. - .+++-+.+-|+ -+--|-.+|-||.-+ ....+..+.++...-+..
T Consensus 1 Mg~~~s~~~~-~---~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~------------ 64 (187)
T KOG0034|consen 1 MGNLSSTLLS-D---EDLEELQMYTGDPTQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL------------ 64 (187)
T ss_pred CCcccccccc-h---hhhHHHHhccCCCcccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc------------
Confidence 8988887642 1 11222222233 223355677777766 555566666655543332
Q ss_pred hHHHHHhhhhhhhhhhccccCCCC-CchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccC
Q 009243 72 SFRVLLDNLGPSIADLFFVPEKGG-LSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKIS 150 (539)
Q Consensus 72 ~~~~~~~~l~~~~~~~~f~~~~~~-~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 150 (539)
.-|+.-|.|.|+....+. |+..+|+++...==.+.+...++...+++| |-+.+
T Consensus 65 ------Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vY--------------------D~~~~ 118 (187)
T KOG0034|consen 65 ------NPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVY--------------------DLDGD 118 (187)
T ss_pred ------CcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHh--------------------cCCCC
Confidence 457889999999887555 999999999998877888888999999999 77889
Q ss_pred cccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCccccccccccCCcccchhhHHHHH
Q 009243 151 GFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTWT 230 (539)
Q Consensus 151 g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~~~~~~~~~is~~~F~~wi 230 (539)
|.|++++|.+++...+...... ....+..++.-.+.--+ || .+.-|++++|++.+
T Consensus 119 G~I~reel~~iv~~~~~~~~~~----------------~~e~~~~i~d~t~~e~D----~d-----~DG~IsfeEf~~~v 173 (187)
T KOG0034|consen 119 GFISREELKQILRMMVGENDDM----------------SDEQLEDIVDKTFEEAD----TD-----GDGKISFEEFCKVV 173 (187)
T ss_pred CcCcHHHHHHHHHHHHccCCcc----------------hHHHHHHHHHHHHHHhC----CC-----CCCcCcHHHHHHHH
Confidence 9999999999988776432211 22234444444442211 22 34779999999999
Q ss_pred hhhCCCch
Q 009243 231 LTTVPSLT 238 (539)
Q Consensus 231 ~~~~P~l~ 238 (539)
.. .|.+.
T Consensus 174 ~~-~P~~~ 180 (187)
T KOG0034|consen 174 EK-QPDLL 180 (187)
T ss_pred Hc-CccHH
Confidence 84 44553
No 9
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=96.32 E-value=0.013 Score=57.53 Aligned_cols=140 Identities=19% Similarity=0.263 Sum_probs=99.1
Q ss_pred cccC-CCCCchHHHHHhhhhh-----hhhhhccccC----CCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhh
Q 009243 63 ICET-PKVADSFRVLLDNLGP-----SIADLFFVPE----KGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARA 132 (539)
Q Consensus 63 ~~~~-~~~~~~~~~~~~~l~~-----~~~~~~f~~~----~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~ 132 (539)
.|.. --.-+.|..++..+.+ ..+++.|-.- ++.|+..+|+.++..- .|++.+++|+-.+++|
T Consensus 38 ~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~-~rGt~eekl~w~F~ly------- 109 (193)
T KOG0044|consen 38 ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLT-SRGTLEEKLKWAFRLY------- 109 (193)
T ss_pred cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHH-cCCcHHHHhhhhheee-------
Confidence 5633 2336678888888876 4555666554 2779999999999999 9999999999887666
Q ss_pred CCccccccccCCCCcccCcccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCcccccc
Q 009243 133 GLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDC 212 (539)
Q Consensus 133 ~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~ 212 (539)
|.+.+|.|+.+++..++..++.|...... |.-..+....+...|.. .|.
T Consensus 110 -------------D~dgdG~It~~Eml~iv~~i~~m~~~~~~------------~~~~~~~~~~v~~if~k------~D~ 158 (193)
T KOG0044|consen 110 -------------DLDGDGYITKEEMLKIVQAIYQMTGSKAL------------PEDEETPEERVDKIFSK------MDK 158 (193)
T ss_pred -------------cCCCCceEcHHHHHHHHHHHHHHcccccC------------CcccccHHHHHHHHHHH------cCC
Confidence 88899999999999999999999774111 11112233344333321 111
Q ss_pred ccccCCcccchhhHHHHHhhhCCCchhHHHHHH
Q 009243 213 NISDLEIQLPVGKFLTWTLTTVPSLTDCFTQFV 245 (539)
Q Consensus 213 ~~~~~~~~is~~~F~~wi~~~~P~l~~~l~~~~ 245 (539)
.....||+++|..-+. .-|.++.+|..+.
T Consensus 159 ---n~Dg~lT~eef~~~~~-~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 159 ---NKDGKLTLEEFIEGCK-ADPSILRALEQDP 187 (193)
T ss_pred ---CCCCcccHHHHHHHhh-hCHHHHHHhhhcc
Confidence 2357799999999887 4568877776655
No 10
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=94.90 E-value=0.14 Score=48.89 Aligned_cols=97 Identities=14% Similarity=0.181 Sum_probs=77.9
Q ss_pred HHHHhhcccCCCCCcccchhhhhhh-ccccCCccccCCCCCchHHHHHhhhhhhhhhhccccCCCCCchHHhhhhHhHhc
Q 009243 31 LQNAFSKLAHPQTSTLPLQSLQQCF-SLNYDNLICETPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVKCC 109 (539)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc 109 (539)
|++||..+..-++..||-+.|...+ ++++ ++| .++..-|.+.+-. +.+.|++.+|+..+..-=
T Consensus 22 lkeaF~l~D~d~~G~I~~~el~~ilr~lg~--------~~s-------~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 22 LKEAFQLFDRDSDGLIDRNELGKILRSLGF--------NPS-------EAEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred HHHHHHHhCcCCCCCCcHHHHHHHHHHcCC--------CCc-------HHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 7899999999999999999999988 4444 222 2334444444444 457899999999999886
Q ss_pred ccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHH
Q 009243 110 GRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 110 ~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~ 163 (539)
.|......|.-.|++| |.+.+|.|+..+++++|-
T Consensus 86 ~~~~~~Eel~~aF~~f--------------------D~d~dG~Is~~eL~~vl~ 119 (160)
T COG5126 86 KRGDKEEELREAFKLF--------------------DKDHDGYISIGELRRVLK 119 (160)
T ss_pred ccCCcHHHHHHHHHHh--------------------CCCCCceecHHHHHHHHH
Confidence 7999999999999999 778899999999999887
No 11
>PTZ00183 centrin; Provisional
Probab=93.10 E-value=0.83 Score=41.45 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=63.4
Q ss_pred HHHHhhcccCCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhhhhhhhhhhccccCCCCCchHHhhhhHhHhcc
Q 009243 31 LQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVKCCG 110 (539)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc~ 110 (539)
+++.|..+.-..+..|..+.++.++..-. .+.+ ......+...+-...++.|+|.+|+........
T Consensus 19 ~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-------~~~~-------~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~ 84 (158)
T PTZ00183 19 IREAFDLFDTDGSGTIDPKELKVAMRSLG-------FEPK-------KEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG 84 (158)
T ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhC-------CCCC-------HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc
Confidence 78889776555566799999988885221 1111 112223333333333577999999998766545
Q ss_pred cCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHH
Q 009243 111 RMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 111 r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~ 164 (539)
+......+..++..| |.+.+|.|+.++|+.++..
T Consensus 85 ~~~~~~~l~~~F~~~--------------------D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 85 ERDPREEILKAFRLF--------------------DDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred CCCcHHHHHHHHHHh--------------------CCCCCCcCcHHHHHHHHHH
Confidence 555555555555333 6777889999999887754
No 12
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=87.28 E-value=1.9 Score=37.51 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=40.9
Q ss_pred cCcccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCccccccccccCCcccchhhHHH
Q 009243 149 ISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLT 228 (539)
Q Consensus 149 ~~g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~~~~~~~~~is~~~F~~ 228 (539)
.+|.++...|..||.-|+.+--. . .+ .+.... ++.+|++||.... .+..|+..+|.+
T Consensus 15 ~~g~~~~~~l~~lL~d~lqip~~--v---gE------~~aFg~-~e~sv~sCF~~~~-----------~~~~I~~~~Fl~ 71 (90)
T PF09069_consen 15 SNGCMDQRKLGLLLHDVLQIPRA--V---GE------GPAFGY-IEPSVRSCFQQVQ-----------LSPKITENQFLD 71 (90)
T ss_dssp TTS-B-HHHHHHHHHHHHHHHHH--T---T-------GGGGT---HHHHHHHHHHTT-----------T-S-B-HHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHH--h---Cc------cccccC-cHHHHHHHhcccC-----------CCCccCHHHHHH
Confidence 35789999999999999988542 1 11 111222 7889999997522 478899999999
Q ss_pred HHhhhCCCc
Q 009243 229 WTLTTVPSL 237 (539)
Q Consensus 229 wi~~~~P~l 237 (539)
|+..-.+.|
T Consensus 72 wl~~ePq~l 80 (90)
T PF09069_consen 72 WLMSEPQSL 80 (90)
T ss_dssp HHHT--TTT
T ss_pred HHHhCCCee
Confidence 999884443
No 13
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=85.70 E-value=14 Score=37.07 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=85.0
Q ss_pred CcchhhHhHhhhhcCChhhHHHHhhcccCCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhhhhhhhhhhcccc
Q 009243 12 PSEQSEVESLAASTGALPLLQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDNLGPSIADLFFVP 91 (539)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~ 91 (539)
+.++.+.+++.+.- -.|-|..-|...---+++-|--+.||+-++....+.-| ..=-.+|+.+|=.+
T Consensus 41 ~~~a~~~~~~~~~~-~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs-------------~~TcrlmI~mfd~~ 106 (221)
T KOG0037|consen 41 SKEASASPSVRQPP-TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFS-------------IETCRLMISMFDRD 106 (221)
T ss_pred CcCCCcCcccccCc-ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCC-------------HHHHHHHHHHhcCC
Confidence 44556666666666 78999999999888888989999999999855443333 22224566666666
Q ss_pred CCCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHH
Q 009243 92 EKGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 92 ~~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~ 164 (539)
.++.|+..||..+|+.- +---++|.. -|-+..|.|...+|+.-|+.
T Consensus 107 ~~G~i~f~EF~~Lw~~i----------~~Wr~vF~~-----------------~D~D~SG~I~~sEL~~Al~~ 152 (221)
T KOG0037|consen 107 NSGTIGFKEFKALWKYI----------NQWRNVFRT-----------------YDRDRSGTIDSSELRQALTQ 152 (221)
T ss_pred CCCccCHHHHHHHHHHH----------HHHHHHHHh-----------------cccCCCCcccHHHHHHHHHH
Confidence 67999999999999754 556667755 58889999999999997764
No 14
>PTZ00184 calmodulin; Provisional
Probab=84.07 E-value=8.3 Score=34.21 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=61.9
Q ss_pred hHHHHhhcccCCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhhhhhhhhhhccccCCCCCchHHhhhhHhHhc
Q 009243 30 LLQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVKCC 109 (539)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc 109 (539)
-+++.|..+--..+..|..+.+.+.+.--. .++. ....+.+...+=....+.|+|.+|++.....+
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~-------~~~~-------~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~ 77 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-------QNPT-------EAELQDMINEVDADGNGTIDFPEFLTLMARKM 77 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhC-------CCCC-------HHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhc
Confidence 577889887555777899998888663211 1111 11123333333233357799999998765554
Q ss_pred ccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHH
Q 009243 110 GRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 110 ~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~ 164 (539)
........+..+++. -|.+.+|.|+.++|++++..
T Consensus 78 ~~~~~~~~~~~~F~~--------------------~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 78 KDTDSEEEIKEAFKV--------------------FDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred cCCcHHHHHHHHHHh--------------------hCCCCCCeEeHHHHHHHHHH
Confidence 444444444444433 36677899999999988854
No 15
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=76.95 E-value=9.2 Score=35.36 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=62.9
Q ss_pred hhhHHHHhhcccCCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhhhhhhhhhhccccCCCCCchHHhhhhHhH
Q 009243 28 LPLLQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDNLGPSIADLFFVPEKGGLSWIEFLRGFVK 107 (539)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~f~~~~~~ 107 (539)
..-|+++|..+-.-..-.|+...|.+++..---+ +....+..++..+ =..+.+.|+..+|+.-...
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~------~t~~el~~~~~~~--------D~dg~g~I~~~eF~~l~~~ 72 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQN------PTEEELRDLIKEI--------DLDGDGTIDFEEFLDLMEK 72 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC------CCHHHHHHHHHHh--------CCCCCCeEcHHHHHHHHHh
Confidence 3457788888765555777777777776544322 1122222222211 1112467999999987665
Q ss_pred hcccCc----HHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHHHH
Q 009243 108 CCGRMP----ASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCW 166 (539)
Q Consensus 108 cc~r~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~ 166 (539)
-=.... ...-+.-.+|+| |-+.+|.|+.++|++++..+-
T Consensus 73 ~~~~~~~~~~~~~el~eaF~~f--------------------D~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 73 LGEEKTDEEASSEELKEAFRVF--------------------DKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred hhcccccccccHHHHHHHHHHH--------------------ccCCCCcCcHHHHHHHHHHhC
Confidence 511111 123556666666 667899999999999987643
No 16
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=69.96 E-value=24 Score=33.64 Aligned_cols=126 Identities=19% Similarity=0.248 Sum_probs=80.8
Q ss_pred ccCCCCCchHHHHHhh-----hhhhhhhhccccCCCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCcccc
Q 009243 64 CETPKVADSFRVLLDN-----LGPSIADLFFVPEKGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKL 138 (539)
Q Consensus 64 ~~~~~~~~~~~~~~~~-----l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~ 138 (539)
|.--+||-..-.-.+. +-+-|+.+|=-.++|+.++.+|+.-+...|.-.+-+.+.+--+++|
T Consensus 51 ~~~v~vp~e~i~kMPELkenpfk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIY------------- 117 (189)
T KOG0038|consen 51 PPIVKVPFELIEKMPELKENPFKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIY------------- 117 (189)
T ss_pred CCceeecHHHHhhChhhhcChHHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEe-------------
Confidence 4444555443332222 3467888887777899999999999998877777666665555444
Q ss_pred ccccCCCCcccCcccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCccccccccccCC
Q 009243 139 EFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLE 218 (539)
Q Consensus 139 ~~~~~~~d~~~~g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~~~~~~~ 218 (539)
|.+.++.|-.++|.+-|..+- +. ..+ -..+.-....++. .++. ++.
T Consensus 118 -------Dfd~D~~i~~~DL~~~l~~lT------r~-eLs-------~eEv~~i~ekvie-EAD~------------DgD 163 (189)
T KOG0038|consen 118 -------DFDGDEFIGHDDLEKTLTSLT------RD-ELS-------DEEVELICEKVIE-EADL------------DGD 163 (189)
T ss_pred -------ecCCCCcccHHHHHHHHHHHh------hc-cCC-------HHHHHHHHHHHHH-HhcC------------CCC
Confidence 778889999999988765543 11 111 1233444555552 2222 235
Q ss_pred cccchhhHHHHHhhhCCCc
Q 009243 219 IQLPVGKFLTWTLTTVPSL 237 (539)
Q Consensus 219 ~~is~~~F~~wi~~~~P~l 237 (539)
..+++.+|.+.|.. .|-+
T Consensus 164 gkl~~~eFe~~i~r-aPDF 181 (189)
T KOG0038|consen 164 GKLSFAEFEHVILR-APDF 181 (189)
T ss_pred CcccHHHHHHHHHh-Ccch
Confidence 77999999999883 4444
No 17
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=54.86 E-value=17 Score=28.29 Aligned_cols=58 Identities=9% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCcccCcccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCccccccccccCCcccchh
Q 009243 145 ADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVG 224 (539)
Q Consensus 145 ~d~~~~g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~~~~~~~~~is~~ 224 (539)
-|.+.+|.|+.++|++++..+..-.. -..+...+..++ ..++. .....|++.
T Consensus 9 ~D~d~~G~i~~~el~~~~~~~~~~~~---------------~~~~~~~~~~~~-~~~D~------------d~dG~i~~~ 60 (66)
T PF13499_consen 9 FDKDGDGYISKEELRRALKHLGRDMS---------------DEESDEMIDQIF-REFDT------------DGDGRISFD 60 (66)
T ss_dssp HSTTSSSEEEHHHHHHHHHHTTSHST---------------HHHHHHHHHHHH-HHHTT------------TSSSSEEHH
T ss_pred HcCCccCCCCHHHHHHHHHHhccccc---------------HHHHHHHHHHHH-HHhCC------------CCcCCCcHH
Confidence 37888999999999998876542211 112333334444 23333 235789999
Q ss_pred hHHHHH
Q 009243 225 KFLTWT 230 (539)
Q Consensus 225 ~F~~wi 230 (539)
+|..++
T Consensus 61 Ef~~~~ 66 (66)
T PF13499_consen 61 EFLNFM 66 (66)
T ss_dssp HHHHHH
T ss_pred HHhccC
Confidence 998875
No 18
>PTZ00184 calmodulin; Provisional
Probab=51.83 E-value=86 Score=27.58 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=56.5
Q ss_pred hhHHHHhhcccCCCCCcccchhhhhhhccccCCccccCCCCCchHHHHHhhhhhhhhhhccc--cC-CCCCchHHhhhhH
Q 009243 29 PLLQNAFSKLAHPQTSTLPLQSLQQCFSLNYDNLICETPKVADSFRVLLDNLGPSIADLFFV--PE-KGGLSWIEFLRGF 105 (539)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~--~~-~~~~~~~~f~~~~ 105 (539)
+.+++.|..+....++.|.+..+..+.......... ...+...|-. .. .+.|+..+|.+..
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~----------------~~~~~~~F~~~D~~~~g~i~~~e~~~~l 110 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS----------------EEEIKEAFKVFDRDGNGFISAAELRHVM 110 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH----------------HHHHHHHHHhhCCCCCCeEeHHHHHHHH
Confidence 456777777777777777777776665432211000 0111222211 11 3569999998877
Q ss_pred hHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHH
Q 009243 106 VKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 106 ~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~ 163 (539)
..+ +......-+..+++. .|.+.+|.|+.++|..+++
T Consensus 111 ~~~-~~~~~~~~~~~~~~~--------------------~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 111 TNL-GEKLTDEEVDEMIRE--------------------ADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHH-CCCCCHHHHHHHHHh--------------------cCCCCCCcCcHHHHHHHHh
Confidence 654 544444445544422 3566678899999987764
No 19
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=50.72 E-value=11 Score=24.82 Aligned_cols=18 Identities=11% Similarity=0.006 Sum_probs=15.8
Q ss_pred CCcccCcccChHHHHHHH
Q 009243 145 ADCKISGFLRPIDVLMIF 162 (539)
Q Consensus 145 ~d~~~~g~I~~~~l~~ll 162 (539)
.|.+.+|.|+.++|++++
T Consensus 8 ~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 8 FDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HTTTSSSEEEHHHHHHHH
T ss_pred HcCCCCCcCCHHHHHHHC
Confidence 588899999999999864
No 20
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=49.95 E-value=21 Score=24.12 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=15.5
Q ss_pred CcccCcccChHHHHHHHH
Q 009243 146 DCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 146 d~~~~g~I~~~~l~~ll~ 163 (539)
|-+.+|.|+.++|+.+|.
T Consensus 10 D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 10 DKDGDGFIDFEELRAILR 27 (31)
T ss_dssp -TTSSSEEEHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHH
Confidence 667889999999999987
No 21
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=49.11 E-value=40 Score=32.47 Aligned_cols=127 Identities=21% Similarity=0.252 Sum_probs=80.6
Q ss_pred cchhhhhhhcc---ccCCccccCCCCCchHHHHHhhhhhhhhhhc----cccCCCCCchHHhhhhHhHh-cccCcHHHHH
Q 009243 47 PLQSLQQCFSL---NYDNLICETPKVADSFRVLLDNLGPSIADLF----FVPEKGGLSWIEFLRGFVKC-CGRMPASMLL 118 (539)
Q Consensus 47 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----f~~~~~~~~~~~f~~~~~~c-c~r~~~~~~~ 118 (539)
-||.+++.|.+ ++++.++ -..++..|..||+-..|-- +....++|++--|+-.|--- |+-.+-
T Consensus 30 QIqEfKEAF~~mDqnrDG~Id-----keDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe---- 100 (171)
T KOG0031|consen 30 QIQEFKEAFNLMDQNRDGFID-----KEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPE---- 100 (171)
T ss_pred HHHHHHHHHHHHhccCCCccc-----HHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHH----
Confidence 47888888876 6666666 4578888999998643321 22223679999999888543 344443
Q ss_pred HHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHH
Q 009243 119 NTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVE 198 (539)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~ 198 (539)
+.+++-|.. -|-+..|.|+.+.||++|+. + .++.+. ..|....+
T Consensus 101 ~~I~~AF~~-----------------FD~~~~G~I~~d~lre~Ltt-----~---gDr~~~-----------eEV~~m~r 144 (171)
T KOG0031|consen 101 EVILNAFKT-----------------FDDEGSGKIDEDYLRELLTT-----M---GDRFTD-----------EEVDEMYR 144 (171)
T ss_pred HHHHHHHHh-----------------cCccCCCccCHHHHHHHHHH-----h---cccCCH-----------HHHHHHHH
Confidence 344555544 36677899999999999875 2 222232 12444453
Q ss_pred hhhhcCCCccccccccccCCcccchhhHHHHHh
Q 009243 199 SCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTL 231 (539)
Q Consensus 199 s~~~~~~~~~~~~~~~~~~~~~is~~~F~~wi~ 231 (539)
.+-- .....+.|..|+..|.
T Consensus 145 ~~p~-------------d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 145 EAPI-------------DKKGNFDYKAFTYIIT 164 (171)
T ss_pred hCCc-------------ccCCceeHHHHHHHHH
Confidence 3221 1246789999988776
No 22
>PLN02964 phosphatidylserine decarboxylase
Probab=46.14 E-value=51 Score=38.34 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=40.6
Q ss_pred CCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHH
Q 009243 93 KGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 93 ~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~ 164 (539)
++.|++.+|+..+... +.......+..++++| |-+.+|.|+.++|++++..
T Consensus 193 dG~IdfdEFl~lL~~l-g~~~seEEL~eaFk~f--------------------DkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 193 DGQLSFSEFSDLIKAF-GNLVAANKKEELFKAA--------------------DLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCeEcHHHHHHHHHHh-ccCCCHHHHHHHHHHh--------------------CCCCCCcCCHHHHHHHHHh
Confidence 3669999999998876 5555666677777666 5566799999999999887
No 23
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=45.07 E-value=14 Score=25.10 Aligned_cols=20 Identities=10% Similarity=-0.109 Sum_probs=17.2
Q ss_pred CCcccCcccChHHHHHHHHH
Q 009243 145 ADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 145 ~d~~~~g~I~~~~l~~ll~~ 164 (539)
.|.+.+|.|+.++|..++..
T Consensus 9 ~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 9 FDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HSTTSSSEEEHHHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHHh
Confidence 48889999999999998764
No 24
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=41.63 E-value=1.3e+02 Score=25.58 Aligned_cols=21 Identities=5% Similarity=-0.138 Sum_probs=16.8
Q ss_pred cccCc-ccChHHHHHHHHHHHH
Q 009243 147 CKISG-FLRPIDVLMIFWMCWT 167 (539)
Q Consensus 147 ~~~~g-~I~~~~l~~ll~~~~~ 167 (539)
-+.+| .|+.++|+.+|...+-
T Consensus 20 ~dgdG~~I~~~eL~~ll~~~~~ 41 (88)
T cd05027 20 REGDKHKLKKSELKELINNELS 41 (88)
T ss_pred cCCCcCEECHHHHHHHHHHHhH
Confidence 45688 5999999999987553
No 25
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=41.59 E-value=1.5e+02 Score=25.33 Aligned_cols=21 Identities=5% Similarity=-0.219 Sum_probs=16.2
Q ss_pred CcccCc-ccChHHHHHHHHHHH
Q 009243 146 DCKISG-FLRPIDVLMIFWMCW 166 (539)
Q Consensus 146 d~~~~g-~I~~~~l~~ll~~~~ 166 (539)
|-+.+| .|+.++|++++.-.+
T Consensus 21 d~dgdg~~Is~~EL~~ll~~~~ 42 (93)
T cd05026 21 GKEGDRYKLSKGELKELLQREL 42 (93)
T ss_pred ccCCCCCEECHHHHHHHHHHHh
Confidence 355677 599999999887654
No 26
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=40.01 E-value=64 Score=24.06 Aligned_cols=49 Identities=22% Similarity=0.351 Sum_probs=35.1
Q ss_pred CCCchHHhhhhHhHhcccC-cHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHH
Q 009243 94 GGLSWIEFLRGFVKCCGRM-PASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 94 ~~~~~~~f~~~~~~cc~r~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~ 163 (539)
+.|+-.+|.+..... +-. ....-++.|++.| |.+.+|.|+.++|..++.
T Consensus 3 G~i~~~~~~~~l~~~-g~~~~s~~e~~~l~~~~--------------------D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRALSKL-GIKDLSEEEVDRLFREF--------------------DTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHHHHT-TSSSSCHHHHHHHHHHH--------------------TTSSSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHHHHh-CCCCCCHHHHHHHHHhc--------------------ccCCCCCCCHHHHHHHHH
Confidence 457778888877554 333 4444488888665 778889999999988764
No 27
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=36.20 E-value=2.5e+02 Score=23.15 Aligned_cols=17 Identities=6% Similarity=-0.105 Sum_probs=14.6
Q ss_pred ccCcccChHHHHHHHHH
Q 009243 148 KISGFLRPIDVLMIFWM 164 (539)
Q Consensus 148 ~~~g~I~~~~l~~ll~~ 164 (539)
+.+|.|+.++|++++..
T Consensus 22 ~~~G~Is~~el~~~l~~ 38 (88)
T cd00213 22 GDKDTLSKKELKELLET 38 (88)
T ss_pred CCCCcCcHHHHHHHHHH
Confidence 46789999999999875
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=35.13 E-value=74 Score=24.56 Aligned_cols=51 Identities=18% Similarity=0.100 Sum_probs=37.8
Q ss_pred CCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHH
Q 009243 94 GGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMI 161 (539)
Q Consensus 94 ~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~l 161 (539)
+.|+-.+|.+.+...-...+....-.++-.+|.. .|.+.+|.|+.++|..+
T Consensus 15 G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 15 GYISKEELRRALKHLGRDMSDEESDEMIDQIFRE-----------------FDTDGDGRISFDEFLNF 65 (66)
T ss_dssp SEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHH-----------------HTTTSSSSEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHH-----------------hCCCCcCCCcHHHHhcc
Confidence 6699999999888884444455555555555554 58889999999999876
No 29
>COG5485 Predicted ester cyclase [General function prediction only]
Probab=35.10 E-value=49 Score=30.65 Aligned_cols=17 Identities=29% Similarity=0.546 Sum_probs=15.4
Q ss_pred EEEEEeecCcchHHHHH
Q 009243 476 EIEVWGIGGRSAKQMQM 492 (539)
Q Consensus 476 ~IEVWG~g~~~~~e~Q~ 492 (539)
-+|||+++++.+++.|+
T Consensus 114 I~~vwsv~Dk~ai~rQL 130 (131)
T COG5485 114 IVEVWSVIDKMAIERQL 130 (131)
T ss_pred EEeeehhccHHHHHHhh
Confidence 49999999999999886
No 30
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=32.15 E-value=2.8e+02 Score=23.20 Aligned_cols=19 Identities=5% Similarity=-0.136 Sum_probs=15.8
Q ss_pred CcccCc-ccChHHHHHHHHH
Q 009243 146 DCKISG-FLRPIDVLMIFWM 164 (539)
Q Consensus 146 d~~~~g-~I~~~~l~~ll~~ 164 (539)
|-+.+| .|+.++|+++|..
T Consensus 20 d~dg~G~~Is~~El~~~l~~ 39 (92)
T cd05025 20 GKEGDKYKLSKKELKDLLQT 39 (92)
T ss_pred cccCCCCeECHHHHHHHHHH
Confidence 367789 5999999999964
No 31
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=31.99 E-value=1.5e+02 Score=32.79 Aligned_cols=113 Identities=14% Similarity=0.122 Sum_probs=64.0
Q ss_pred hhhhhhhhhccccCCCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHH
Q 009243 79 NLGPSIADLFFVPEKGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDV 158 (539)
Q Consensus 79 ~l~~~~~~~~f~~~~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l 158 (539)
..++.|...-=...++.|+..+|.+ |... +=.-|+++|.+ -|.+.||.|.+.++
T Consensus 51 ~~~~~l~~~~d~~~dg~vDy~eF~~-Y~~~--------~E~~l~~~F~~-----------------iD~~hdG~i~~~Ei 104 (463)
T KOG0036|consen 51 EAAKMLFSAMDANRDGRVDYSEFKR-YLDN--------KELELYRIFQS-----------------IDLEHDGKIDPNEI 104 (463)
T ss_pred HHHHHHHHhcccCcCCcccHHHHHH-HHHH--------hHHHHHHHHhh-----------------hccccCCccCHHHH
Confidence 4444444433233358899999976 3333 23456777766 68999999999998
Q ss_pred HHHHHHHHHHHhcccccccCCCcccccccchHHHHHHHHHhhhhcCCCccccccccccCCcccchhhHHHHHhhhCCCch
Q 009243 159 LMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTTVPSLT 238 (539)
Q Consensus 159 ~~ll~~~~~~a~~~~~~~~~~~~~~~~l~~l~~~~~sav~s~~~~~~~~~~~~~~~~~~~~~is~~~F~~wi~~~~P~l~ 238 (539)
.+.|--+-. .+. .+-+++++...+. .++-.|.++.+.+...-+.-.=.
T Consensus 105 ~~~l~~~gi-----------------~l~--de~~~k~~e~~d~-------------~g~~~I~~~e~rd~~ll~p~s~i 152 (463)
T KOG0036|consen 105 WRYLKDLGI-----------------QLS--DEKAAKFFEHMDK-------------DGKATIDLEEWRDHLLLYPESDL 152 (463)
T ss_pred HHHHHHhCC-----------------ccC--HHHHHHHHHHhcc-------------CCCeeeccHHHHhhhhcCChhHH
Confidence 876643321 111 1224555644443 23566778877777663321111
Q ss_pred hHHHHHHHHhh
Q 009243 239 DCFTQFVYARL 249 (539)
Q Consensus 239 ~~l~~~~~h~L 249 (539)
.-+-.++.|.+
T Consensus 153 ~di~~~W~h~~ 163 (463)
T KOG0036|consen 153 EDIYDFWRHVL 163 (463)
T ss_pred HHHHHhhhhhe
Confidence 12235566666
No 32
>PTZ00183 centrin; Provisional
Probab=31.81 E-value=2.5e+02 Score=24.98 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=32.9
Q ss_pred CCCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHH
Q 009243 93 KGGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 93 ~~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~ 163 (539)
++.|+..+|......+ +.......+..++.. .|.+.+|.|+.++|..++.
T Consensus 104 ~G~i~~~e~~~~l~~~-~~~l~~~~~~~~~~~--------------------~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 104 TGKISLKNLKRVAKEL-GETITDEELQEMIDE--------------------ADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred CCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHH--------------------hCCCCCCcCcHHHHHHHHh
Confidence 3669988888766544 544444445544432 3556678899999988764
No 33
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=28.57 E-value=1.7e+02 Score=20.76 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=31.4
Q ss_pred CCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHH
Q 009243 94 GGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIF 162 (539)
Q Consensus 94 ~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll 162 (539)
+.|++.+|.......+ .......+..+++.+ |.+.+|.|+.++|..++
T Consensus 15 g~l~~~e~~~~l~~~~-~~~~~~~~~~~~~~~--------------------~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 15 GTISADELKAALKSLG-EGLSEEEIDEMIREV--------------------DKDGDGKIDFEEFLELM 62 (63)
T ss_pred CcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHh--------------------CCCCCCeEeHHHHHHHh
Confidence 6699999988877663 333444444444332 44557789999987765
No 34
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=26.76 E-value=1.8e+02 Score=24.44 Aligned_cols=54 Identities=15% Similarity=0.043 Sum_probs=35.6
Q ss_pred CCCchHHhhhhHhHhccc----CcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHHHHH
Q 009243 94 GGLSWIEFLRGFVKCCGR----MPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWT 167 (539)
Q Consensus 94 ~~~~~~~f~~~~~~cc~r----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~~ 167 (539)
+.|++.+|.+.+..-=+. ......++.+++. .|.+.+|.|+.++|.+++..+.+
T Consensus 25 ~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~--------------------~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 25 DTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFED--------------------LDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred ccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHH--------------------cCCCCCCcCcHHHHHHHHHHHHH
Confidence 469999998888532011 1124555555532 36778899999999998886643
No 35
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=26.71 E-value=3e+02 Score=23.17 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHH
Q 009243 115 SMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~ 164 (539)
+..++.|.++|-.-.. ..+.+|.|+.++|+.++..
T Consensus 4 e~~i~~~~~~f~~y~~---------------~~~~~~~Is~~El~~ll~~ 38 (88)
T cd05030 4 EKAIETIINVFHQYSV---------------RKGHPDTLYKKEFKQLVEK 38 (88)
T ss_pred HHHHHHHHHHHHHHhc---------------cCCCcccCCHHHHHHHHHH
Confidence 5677888888866332 2235778999999999974
No 36
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=26.48 E-value=1.1e+02 Score=30.96 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=36.9
Q ss_pred HHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHHHHHH-----HhcccccccCCCcccccccchHHH
Q 009243 122 LRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTM-----WWDARTRKFSKGKEEIFQPDVNHL 192 (539)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~~~-----a~~~~~~~~~~~~~~~~l~~l~~~ 192 (539)
|+-.+..|++.|++ ||=+.+ |+.+||+.++..|+-. .|.-|.+-+.+..|....++++.+
T Consensus 166 ~~avA~aca~~g~~--lEPTGG---------Idl~Nf~~I~~i~ldaGv~kviPHIYssiIDk~tG~TrpedV~~l 230 (236)
T TIGR03581 166 YAAVAKACAKHGFY--LEPTGG---------IDLDNFEEIVQIALDAGVEKVIPHVYSSIIDKETGNTRVEDVKQL 230 (236)
T ss_pred HHHHHHHHHHcCCc--cCCCCC---------ccHHhHHHHHHHHHHcCCCeeccccceeccccccCCCCHHHHHHH
Confidence 34567779999975 344444 9999999999999954 233344434333333444454444
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=25.84 E-value=2.3e+02 Score=23.35 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=37.0
Q ss_pred CCCCchHHhhhhHhHhcccCc----HHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHHHHHH
Q 009243 93 KGGLSWIEFLRGFVKCCGRMP----ASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWT 167 (539)
Q Consensus 93 ~~~~~~~~f~~~~~~cc~r~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~~~~~ 167 (539)
++.|+..+|.+.+..-++... ...-+..+++. .|.+.+|.|+.++|..++.-+++
T Consensus 24 ~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~--------------------~d~~~~g~I~f~eF~~~~~~~~~ 82 (88)
T cd00213 24 KDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKD--------------------LDVNKDGKVDFQEFLVLIGKLAV 82 (88)
T ss_pred CCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHH--------------------hccCCCCcCcHHHHHHHHHHHHH
Confidence 477999999988864212211 23344545533 36677889999999999888765
No 38
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=23.94 E-value=58 Score=19.44 Aligned_cols=20 Identities=10% Similarity=-0.102 Sum_probs=16.0
Q ss_pred CCcccCcccChHHHHHHHHH
Q 009243 145 ADCKISGFLRPIDVLMIFWM 164 (539)
Q Consensus 145 ~d~~~~g~I~~~~l~~ll~~ 164 (539)
.|.+.+|.|+.++|+.++..
T Consensus 9 ~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 9 FDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HCCCCCCcEeHHHHHHHHHh
Confidence 36677889999999988763
No 39
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=23.21 E-value=87 Score=36.95 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=24.5
Q ss_pred HHHHHHhhhhcCCCccccccccccCCcccchhhHHHHHhhhCCCc
Q 009243 193 VLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTTVPSL 237 (539)
Q Consensus 193 ~~sav~s~~~~~~~~~~~~~~~~~~~~~is~~~F~~wi~~~~P~l 237 (539)
+.-+|++||.. ..+.+.|++.+|..|+....-.|
T Consensus 552 vepsvrsCF~~-----------v~~~pei~~~~f~dw~~~epqsm 585 (966)
T KOG4286|consen 552 IEPSVRSCFQF-----------VNNKPEIEAALFLDWMRLEPQSM 585 (966)
T ss_pred CChHHHHHHHh-----------cCCCCcchHHHHHHHhccCcchh
Confidence 34567889853 13589999999999998554333
No 40
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=22.23 E-value=37 Score=37.55 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=48.2
Q ss_pred HHHhhhhhhhhhhccccCC-CCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCccc
Q 009243 75 VLLDNLGPSIADLFFVPEK-GGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFL 153 (539)
Q Consensus 75 ~~~~~l~~~~~~~~f~~~~-~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I 153 (539)
.+|-+|+..=..+.|-.-. ..|+-.+|.|-....|+--..+--+.+.+++| |+|+||.|
T Consensus 383 ~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IF--------------------D~N~Dg~L 442 (489)
T KOG2643|consen 383 RFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIF--------------------DENNDGTL 442 (489)
T ss_pred HHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEE--------------------ccCCCCcc
Confidence 4556677665555555533 44888888887776666666655666666555 88999999
Q ss_pred ChHHHHHHHH
Q 009243 154 RPIDVLMIFW 163 (539)
Q Consensus 154 ~~~~l~~ll~ 163 (539)
+.++|..++.
T Consensus 443 S~~EFl~Vmk 452 (489)
T KOG2643|consen 443 SHKEFLAVMK 452 (489)
T ss_pred cHHHHHHHHH
Confidence 9999987754
No 41
>PF14658 EF-hand_9: EF-hand domain
Probab=20.91 E-value=2.9e+02 Score=22.78 Aligned_cols=57 Identities=19% Similarity=0.282 Sum_probs=38.7
Q ss_pred ccccCC-CCCchHHhhhhHhHhcccCcHHHHHHHHHHHHHHHHhhhCCccccccccCCCCcccCcccChHHHHHHHH
Q 009243 88 FFVPEK-GGLSWIEFLRGFVKCCGRMPASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 163 (539)
Q Consensus 88 ~f~~~~-~~~~~~~f~~~~~~cc~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~~l~~ll~ 163 (539)
+|.+.+ |.|.-.+.+---..|-+|++.+..|..|.+.+ + -++. +|.|..++|..++.
T Consensus 6 ~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~el--D----------------P~g~-~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 6 AFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINEL--D----------------PEGR-DGSVNFDTFLAIMR 63 (66)
T ss_pred hcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHh--C----------------CCCC-CceEeHHHHHHHHH
Confidence 466665 55776666665556656699999999888655 1 2233 57899999877654
Done!