Query 009245
Match_columns 539
No_of_seqs 271 out of 2250
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 22:07:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3js8_A Cholesterol oxidase; ch 100.0 3.5E-68 1.2E-72 569.5 30.0 443 46-534 14-539 (540)
2 4feh_A Oxidoreductase DPRE1; a 100.0 2.9E-65 9.9E-70 547.2 36.1 437 45-533 27-478 (481)
3 2i0k_A Oxidoreductase; MIX alp 100.0 5.3E-64 1.8E-68 548.3 33.9 452 45-535 19-561 (561)
4 2vfr_A Xylitol oxidase, aldito 100.0 3.3E-60 1.1E-64 503.2 38.2 408 50-536 9-422 (422)
5 2bvf_A 6-hydroxy-D-nicotine ox 100.0 6.5E-38 2.2E-42 335.5 28.7 407 47-529 24-452 (459)
6 4bby_A Alkyldihydroxyacetoneph 100.0 9.7E-36 3.3E-40 331.0 29.3 210 45-262 189-410 (658)
7 3pm9_A Putative oxidoreductase 100.0 7.2E-34 2.4E-38 304.1 24.4 204 49-261 38-252 (476)
8 3tsh_A Pollen allergen PHL P 4 100.0 6.7E-33 2.3E-37 299.7 29.5 181 53-242 44-229 (500)
9 1w1o_A Cytokinin dehydrogenase 100.0 2.2E-32 7.4E-37 297.9 30.3 203 49-261 56-270 (534)
10 3rja_A Carbohydrate oxidase; p 100.0 1.3E-30 4.6E-35 278.9 36.0 189 45-242 20-211 (473)
11 2exr_A Cytokinin dehydrogenase 100.0 9.2E-31 3.2E-35 283.8 30.6 201 51-262 51-264 (524)
12 2uuu_A Alkyldihydroxyacetoneph 100.0 1.4E-30 4.7E-35 284.8 31.1 203 52-262 128-340 (584)
13 3fw9_A Reticuline oxidase; BI- 100.0 5.9E-30 2E-34 274.6 33.8 182 52-243 36-221 (495)
14 2y3s_A TAML; oxidoreductase; H 100.0 1.4E-29 4.9E-34 274.4 33.2 180 45-235 42-232 (530)
15 3vte_A Tetrahydrocannabinolic 100.0 1.6E-29 5.5E-34 271.9 30.3 180 53-242 45-228 (518)
16 1zr6_A Glucooligosaccharide ox 100.0 1.1E-28 3.9E-33 266.3 35.2 181 50-241 31-214 (503)
17 3pop_A GILR oxidase; FAD bindi 100.0 2.9E-29 9.7E-34 269.9 28.8 181 46-235 19-208 (501)
18 2wdx_A Putative hexose oxidase 100.0 5.3E-28 1.8E-32 261.9 34.8 178 52-240 48-247 (523)
19 2ipi_A Aclacinomycin oxidoredu 100.0 7.4E-28 2.5E-32 260.8 35.7 184 46-240 39-245 (521)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1.2E-26 4E-31 253.6 34.8 189 57-255 66-291 (560)
21 1wvf_A 4-cresol dehydrogenase 99.9 1.5E-26 5E-31 251.1 21.8 188 58-255 53-259 (520)
22 1f0x_A DLDH, D-lactate dehydro 99.9 1.6E-26 5.6E-31 251.0 13.7 198 53-261 38-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.5E-23 5.2E-28 212.5 14.1 174 48-240 43-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.3E-22 4.5E-27 206.8 14.3 168 49-238 38-209 (326)
25 1uxy_A MURB, uridine diphospho 99.9 1.3E-21 4.4E-26 199.8 16.9 173 49-240 4-183 (340)
26 3i99_A UDP-N-acetylenolpyruvoy 99.9 5E-22 1.7E-26 203.4 13.2 175 48-241 19-200 (357)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 1.2E-19 4.1E-24 178.9 10.0 161 48-239 11-173 (268)
28 2yvs_A Glycolate oxidase subun 99.7 4.2E-18 1.4E-22 163.3 10.7 114 121-245 1-121 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 8.3E-07 2.8E-11 88.4 6.8 157 62-238 5-177 (287)
30 2w3s_A Xanthine dehydrogenase; 97.6 2.5E-05 8.4E-10 82.6 4.0 152 63-238 178-346 (462)
31 1n62_C Carbon monoxide dehydro 97.4 9.2E-05 3.2E-09 73.5 5.1 154 62-238 5-177 (288)
32 3nvz_B Xanthine dehydrogenase/ 96.9 0.0017 5.8E-08 64.9 7.8 159 59-237 7-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.8 0.0011 3.8E-08 65.7 5.4 152 62-237 5-175 (288)
34 3hrd_C Nicotinate dehydrogenas 95.7 0.0061 2.1E-07 60.5 3.8 108 62-173 3-121 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 92.4 0.084 2.9E-06 52.9 4.0 102 63-170 7-119 (324)
36 1f0x_A DLDH, D-lactate dehydro 89.8 0.31 1.1E-05 52.7 5.6 100 395-527 456-556 (571)
37 3unc_A Xanthine dehydrogenase/ 89.1 0.41 1.4E-05 56.8 6.2 109 61-174 232-359 (1332)
38 1wvf_A 4-cresol dehydrogenase 85.1 3 0.0001 44.4 9.8 109 397-527 394-509 (520)
39 3zyv_A AOH1; oxidoreductase, m 70.7 1.6 5.5E-05 51.9 2.3 79 63-147 241-321 (1335)
40 2gvs_A Chemosensory protein CS 67.4 3 0.0001 34.4 2.6 33 501-535 74-106 (109)
41 1k19_A Chemosensory protein CS 63.8 3 0.0001 34.6 1.9 31 501-533 72-102 (112)
42 1rzw_A Protein AF2095(GR4); be 35.4 68 0.0023 26.8 5.8 44 52-97 41-84 (123)
43 1xty_A PTH, peptidyl-tRNA hydr 29.2 49 0.0017 27.5 3.9 43 52-96 47-89 (120)
44 1wn2_A Peptidyl-tRNA hydrolase 27.7 55 0.0019 27.3 4.0 43 52-96 48-90 (121)
45 1rlk_A Hypothetical protein TA 24.3 60 0.002 26.8 3.6 43 52-96 44-86 (117)
46 2zv3_A PTH, peptidyl-tRNA hydr 21.2 58 0.002 26.8 2.9 43 52-96 42-84 (115)
No 1
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=3.5e-68 Score=569.45 Aligned_cols=443 Identities=16% Similarity=0.205 Sum_probs=338.3
Q ss_pred ccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCC---CCcEEEEcC-CCCCce
Q 009245 46 TITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAG---QEGLLISTK-HLNRVL 121 (539)
Q Consensus 46 ~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~---~~gv~I~l~-~l~~ii 121 (539)
.+...|.||++++.+.|.++++|+|++||+++|+.|++++++|+++ |||||+++++++++ .++++|||+ +||+|
T Consensus 14 ~y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~-GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I- 91 (540)
T 3js8_A 14 LYKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRAR-GMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM- 91 (540)
T ss_dssp CEEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-
T ss_pred hhcceeeccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEE-eCCCCcccccccCCCCCCCeEEEECcCcCCCE-
Confidence 4457789999999999999999999999999999999999999999 89999987776543 368999995 69997
Q ss_pred EeeCC--CCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCc---------CCCCccccceeEE
Q 009245 122 KLDVQ--AMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLW---------GRGSSVHDYAVEI 190 (539)
Q Consensus 122 ~id~~--~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~---------~~~g~~~d~V~~~ 190 (539)
++|++ .++|+|+||+++.+|.++|.++|+++++.+++..+||||++++|+||++.. .++|.++|+|+++
T Consensus 92 ~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~l 171 (540)
T 3js8_A 92 SIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSL 171 (540)
T ss_dssp EEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEE
T ss_pred EECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEE
Confidence 99985 589999999999999999999999999988887799999999999998631 2689999999999
Q ss_pred EEEccCCCcccceeEEEcCCCcccccccccccccceeeEEeEEEeEEcCcccEEEE-ecCcchHHH-------HHHHhcc
Q 009245 191 RIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYV-QKSDSDLGD-------QAAIFGH 262 (539)
Q Consensus 191 ~vV~~~G~~~~~~~v~~~~~~~~df~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~-~~~~~~~~~-------~~~~~~~ 262 (539)
++|+++|++..+ .+++++++++||+++++|+|. ||||++|||++|.+++..... ..+.+++.+ .++++++
T Consensus 172 evV~adG~~~~~-~i~~~s~~~~DL~a~r~G~G~-gIVTevtlrl~P~~~l~~~~~~~~~~~e~l~~~~~~~~~~~~~~~ 249 (540)
T 3js8_A 172 TAVVYDKASGAY-ALRKFARNDPQIAPLLAHVGR-SLIVEATLQAAPNQRLRCQSWFNIPYGEMFAAAGSGGRTFASYLD 249 (540)
T ss_dssp EEEEEETTTTEE-EEEEEETTSGGGHHHHTCTTS-SCEEEEEEEEEECCEEEEEEECCSCHHHHTCCSSCCSSCHHHHHH
T ss_pred EEEcCCCCCcee-eEEEeCCCChhHHHHHhcCCC-eEEEEEEEEEEECCceEEEEEecCCHHHHHhhcccccccHHHHHh
Confidence 999999962111 166777778887677777788 699999999999999876654 357787776 7899999
Q ss_pred cccceeEEEecCCCceeeeeccccCCCCCCCCc-c---cccCccchhHHHHHHhhhcHHHHhhccccCcccccc-chhhh
Q 009245 263 RHEFADITWYPSQRKAAYRVDDRISSNTSGNGL-Y---NFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGG-KLVTS 337 (539)
Q Consensus 263 ~~~~~~~~w~p~~~~~~~~~~~~~p~~~~~~~~-~---~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~ 337 (539)
+++|++++|||++++++.+.++..|..+++... . .+...+.. ...+.+. .|... ...|.
T Consensus 250 ~~~~~e~~WfP~t~~~~~k~~~~~~~~p~~~~~~~~p~~~~~~d~l-------~~~~~~~---------~~~~~~~~~p~ 313 (540)
T 3js8_A 250 SAGRVEAIWFPFTSNPWLKVWTVTPNKPLFSRQTDKPFNYPFSDNL-------PDEVTDL---------ANKILSLGDGK 313 (540)
T ss_dssp HTSEEEEEECTTCSSCEEEEEEECSSCCTTCEECSSSCCCHHHHSC-------CHHHHHH---------HHHHHTSCCGG
T ss_pred ccCeEEEEEECCCCceEEEEccCCCCCCCccccccCCccccccccc-------chHHHHH---------HHHHhhcCCcc
Confidence 999999999999999998888776554333211 0 00000000 0000000 01100 01111
Q ss_pred h---hhhhhcccccCCeeee-cccccccc--ccccccccccccccccccccccCCCcccCcceeeeEEEE--echhHHHH
Q 009245 338 T---LNAFAFGLTNDGVVFA-GYPVIGYQ--NRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSV--ALSVVKNF 409 (539)
Q Consensus 338 ~---~~~~~~~~~~~~~~~~-~~~~v~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i--P~~~~~~~ 409 (539)
. +..+.++....+...+ ...++||+ ++++.+ .+..+|.++||+| |+++++++
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~d~~g~s~~~~~~~~--------------------~~~~r~~~~eyav~~p~~~~~~~ 373 (540)
T 3js8_A 314 LTPAFGKAQFAAASAGLVATASWDLWGWSKNLLLYVK--------------------PTTLRVTANGYAVLTRRENVQRV 373 (540)
T ss_dssp GHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCC--------------------TTSCCCEEBCEEEEECGGGHHHH
T ss_pred cchhHHhHHHHhhhccccccccccccccccceEEEec--------------------CccceeEeeEEeecCcHHHHHHH
Confidence 1 1111111110111111 11356777 666522 1345789999999 99999999
Q ss_pred HHHHHHHHHh---CccccccceeeeeEEEEEecCCCCC-----------CCC--CCC-------eEEEEEEEeccCCCCC
Q 009245 410 IQDIQKLVQM---EPKALCGLELYNGIIMRYVKASNAY-----------LGK--QED-------SLDFDIMYYRSKDPMA 466 (539)
Q Consensus 410 l~~v~~~~~~---~~~~~~~~~~~~pi~~Rfv~~d~~~-----------Ls~--~~d-------~~~i~i~~~~~~~~~~ 466 (539)
|++++++++. ......++++++|||||++++|+.| ||+ +|+ +|||++++|+..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~v~~pvEvR~~~~D~~~~~~~~~~~~p~LS~~~~r~~~p~~d~~~~i~~~~~~~~---- 449 (540)
T 3js8_A 374 LNEFVTFYQARVQAYQQQGRYPMNGPVEIRVTGLDDPSEAALSGGVAPALSAIRPRPDHPEWNVAVWLDILTLPGT---- 449 (540)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSCEEEEEECCCCGGGSSSTTCCCCTTCTTCCCTTCTTCCEEEEEEEEECTTC----
T ss_pred HHHHHHHHHhhhhhhhhccCcccccceEEEEecCCchhhccccccCCcccCccCCCCCCCCcceEEEEEeeecCCC----
Confidence 9999998872 0011134678999999999999999 687 566 999999999854
Q ss_pred ccccH-HHHHHHHHHHHhhcCC-----ccccccC-------CCccchhHHHh----C-------CCHHHHHHHHHhcCCC
Q 009245 467 PRLYE-DVLEEIEQLAVFKYGG-----LPHWGKN-------RNLVFDGVIKK----Y-------KNAGEFLKVKQKFDPL 522 (539)
Q Consensus 467 ~~~~~-~~~~~ie~~~~~~~gG-----RPHWgK~-------~~~~~~~l~~~----Y-------P~~~~F~~~r~~~DP~ 522 (539)
| ++ +||+++|+++..+||| ||||||. |..+.++|++. | |+|++|+++|+++||+
T Consensus 450 p--~~~~~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~DP~ 527 (540)
T 3js8_A 450 P--YANQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPY 527 (540)
T ss_dssp T--THHHHHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHHHHHHCTT
T ss_pred c--cHHHHHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHHHHhcCCC
Confidence 3 55 5999999994444999 9999999 55577889888 9 9999999999999999
Q ss_pred CCCcchhhhhhc
Q 009245 523 GLFSSEWTDQML 534 (539)
Q Consensus 523 g~F~n~~~~~ll 534 (539)
|+|+|+|+++||
T Consensus 528 ~~F~n~~l~~ll 539 (540)
T 3js8_A 528 RLFSSPLLDSLG 539 (540)
T ss_dssp CCSCCHHHHHHT
T ss_pred cccCCHHHHHhh
Confidence 999999999987
No 2
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=2.9e-65 Score=547.24 Aligned_cols=437 Identities=16% Similarity=0.219 Sum_probs=324.8
Q ss_pred cccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHc--CCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceE
Q 009245 45 CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMT--KTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLK 122 (539)
Q Consensus 45 ~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~--~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~ 122 (539)
.+....|+||+ +..+.|.++++|+|++||+++|+.|+++ +++++++ |+|||+++.+.+ .+|++|||++||++++
T Consensus 27 ~~~~~~~~~W~-~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~-G~G~s~~~~~~~--~~gvvIdl~~l~~i~~ 102 (481)
T 4feh_A 27 TTTATRLTGWG-RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIAR-GLGRSYGDNAQN--GGGLVIDMTPLNTIHS 102 (481)
T ss_dssp CEEEEEECCTT-CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEE-CSSCSSSSTTCC--TTSEEEECTTCCCEEE
T ss_pred CCccceeeccc-CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEE-eCCcCCCCCCCC--cCeEEEECccCCCceE
Confidence 34456789995 5689999999999999999999999999 7999999 788998766542 3699999999999989
Q ss_pred eeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccc
Q 009245 123 LDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEF 202 (539)
Q Consensus 123 id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~ 202 (539)
+|+++++|+|+||+++.+|.++|.++|+++++.+++..+||||+|++|+||.+.. ++|.++|+|+++++|++||+
T Consensus 103 ~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~-~~G~~~d~V~~~evV~~dG~---- 177 (481)
T 4feh_A 103 IDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHH-SAGSFGNHVRSMDLLTADGE---- 177 (481)
T ss_dssp EETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEECTTSC----
T ss_pred EcCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcc-cCCCccceEeEEEEEeCCCC----
Confidence 9999999999999999999999999999999999988899999999999999865 57999999999999999999
Q ss_pred eeEEEcCCC--ccc-ccccccccccceeeEEeEEEeEEcCcccEEEEecCcchHH---HHHHHhcccccceeEEEe----
Q 009245 203 VNVRVLNES--HQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLG---DQAAIFGHRHEFADITWY---- 272 (539)
Q Consensus 203 ~~v~~~~~~--~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~w~---- 272 (539)
+++++++ ++| |++.+||+|++||||++||++.|.++..+.....+..++. +.+++...++++++++|+
T Consensus 178 --v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~w~d~~~ 255 (481)
T 4feh_A 178 --IRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTYSSAWFDAIS 255 (481)
T ss_dssp --EEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGGGCSEEEEEECCSS
T ss_pred --EEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEEeccC
Confidence 8888874 678 9999999999999999999999987765544444444444 444444566788999999
Q ss_pred --cCCCceeeeeccccCCCCCCCC-cccccCccchhHHHHHHhhhcHHHHhhccccCccccccchhhhhhhhhhcccccC
Q 009245 273 --PSQRKAAYRVDDRISSNTSGNG-LYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTND 349 (539)
Q Consensus 273 --p~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (539)
|+.+++++...++.+....... ..+.+.+.+.... .......+.+...... ..++...
T Consensus 256 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~vp~~~p~~~l~~~~~-----------~~~~~~~------ 316 (481)
T 4feh_A 256 APPKLGRAAVSRGRLATVEQLPAKLRSEPLKFDAPQLL--TLPDVFPNGLANKYTF-----------GPIGELW------ 316 (481)
T ss_dssp CTTSTTCEEEEEEEECCGGGSCGGGGGSTTCCC-----------------------------------------------
T ss_pred CCCCCCeEEEEeCCcCcccccccccccCcccccccccc--CCCccCcHHHHhHHHH-----------HHHHHHH------
Confidence 6778898888776543211000 0010111100000 0000101100000000 0000000
Q ss_pred CeeeeccccccccccccccccccccccccccccccCCCcccCcceeeeEEEEechhHHHHHHHHHHHHHhCcccccccee
Q 009245 350 GVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLEL 429 (539)
Q Consensus 350 ~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~iP~~~~~~~l~~v~~~~~~~~~~~~~~~~ 429 (539)
+...|. ....+......+ .|.|. ...|++.+...+|.|+||+||.+ +.++|+++++++++... ..
T Consensus 317 ---~~~~~~--~~~~~~~~~~~~-~p~d~---v~~~nr~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~~-----~~ 381 (481)
T 4feh_A 317 ---YRKSGT--YRGKVQNLTQFY-HPLDM---FGEWNRAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASGH-----YS 381 (481)
T ss_dssp ----CCSCC--EEEEEEEHHHHH-C----------CHHHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTTC-----CC
T ss_pred ---HhhCcc--cccccccceeee-chhhh---ccccccccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcCC-----Cc
Confidence 000000 000000000000 12222 34566554444699999999999 99999999999987532 35
Q ss_pred eeeEEEEEecCCCCCCCCCCCeEEEEEEEeccCCCCCccccHHHHHHHHHHHHhhcCCccccccCCCccchhHHHhCCCH
Q 009245 430 YNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNA 509 (539)
Q Consensus 430 ~~pi~~Rfv~~d~~~Ls~~~d~~~i~i~~~~~~~~~~~~~~~~~~~~ie~~~~~~~gGRPHWgK~~~~~~~~l~~~YP~~ 509 (539)
++|+|+||+++|++|||++++.++|.+++|... .+++||+++|++ +.+|||||||||+|.+++++|+++||+|
T Consensus 382 ~~~v~~R~~~~d~~~LS~~~~~~tlal~~~~~~------~~~~~~~~le~i-~~~~gGRphw~K~~~~~~~~~~~~YP~~ 454 (481)
T 4feh_A 382 FLNVFKLFGPRNQAPLSFPIPGWNICVDFPIKD------GLGKFVSELDRR-VLEFGGRLYTAKDSRTTAETFHAMYPRV 454 (481)
T ss_dssp SCCEEEEECCCCSCTTCCCCSEEEEEEEEECCT------THHHHHHHHHHH-HHHTTCEECGGGCSSCCHHHHHHHCTTH
T ss_pred eEEEEEEEeCCCCccCCCCCCceEEEEEccCCc------cHHHHHHHHHHH-HHHcCCEecchhccCCCHHHHHHhCcCH
Confidence 899999999999999999999999999987532 388999999999 8999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcchhhhhh
Q 009245 510 GEFLKVKQKFDPLGLFSSEWTDQM 533 (539)
Q Consensus 510 ~~F~~~r~~~DP~g~F~n~~~~~l 533 (539)
++|+++|+++||+|+|.|+|++|+
T Consensus 455 ~~F~~lr~~~DP~g~F~n~~~rr~ 478 (481)
T 4feh_A 455 DEWISVRRKVDPLRVFASDMARRL 478 (481)
T ss_dssp HHHHHHHHHHCTTCCBCCHHHHHT
T ss_pred HHHHHHHHhhCCccccCCHHHHhh
Confidence 999999999999999999999987
No 3
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=5.3e-64 Score=548.26 Aligned_cols=452 Identities=17% Similarity=0.206 Sum_probs=334.0
Q ss_pred cccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCC---CCcEEEEc-CCCCCc
Q 009245 45 CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAG---QEGLLIST-KHLNRV 120 (539)
Q Consensus 45 ~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~---~~gv~I~l-~~l~~i 120 (539)
..+.+.+.||++++.+.|..+++|+|++||+++|+.|++++.+|+++ |||||++++++.++ .++++||| ++||+|
T Consensus 19 ~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~-G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i 97 (561)
T 2i0k_A 19 ALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPR-GAMAGWTPLTVEKGANVEKVILADTMTHLNGI 97 (561)
T ss_dssp CCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE
T ss_pred HhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-CCCCCcccccccCCCcCCCeEEEechhhCCce
Confidence 44667789999999999999999999999999999999999999999 78999877655432 35799999 899996
Q ss_pred eEeeC--CCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCC----------CcCCCCcccccee
Q 009245 121 LKLDV--QAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSS----------LWGRGSSVHDYAV 188 (539)
Q Consensus 121 i~id~--~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~----------~~~~~g~~~d~V~ 188 (539)
++|+ ++++|+|+||+++.+|.++|.++|+.+++.+++..+||||++++|+||+. .. ++|.++|+|+
T Consensus 98 -~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~-~~G~~~d~V~ 175 (561)
T 2i0k_A 98 -TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGH-TYGSLSNLVT 175 (561)
T ss_dssp -EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTC-CSSCGGGGEE
T ss_pred -EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCccccccc-ccccHhheEE
Confidence 9998 78999999999999999999999999999999988999999999999974 32 5899999999
Q ss_pred EEEEEccCCCcccceeEEEcCCCcccccccccccccceeeEEeEEEeEEcCcccEEEEe-cCcchHHHH-------HHHh
Q 009245 189 EIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQ-KSDSDLGDQ-------AAIF 260 (539)
Q Consensus 189 ~~~vV~~~G~~~~~~~v~~~~~~~~df~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~~-~~~~~~~~~-------~~~~ 260 (539)
++++|++||++ .++++++++++||+++..|+|. ||||++|||+.|.++....... .+.+++.+. +..+
T Consensus 176 ~~evV~~dG~~---~~~~~~~~~~~dl~~a~~g~G~-giIt~~tl~l~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 251 (561)
T 2i0k_A 176 ELTAVVWNGTT---YALETYQRNDPRITPLLTNLGR-CFLTSVTMQAGPNFRQRCQSYTDIPWRELFAPKGADGRTFEKF 251 (561)
T ss_dssp EEEEEEECSSS---EEEEEEETTSGGGHHHHSCTTS-SCEEEEEEECEECCEEEEEEECCSCHHHHTCCTTCSSSCHHHH
T ss_pred EEEEEeCCCCE---EEeeeccCCCccHHHHHhcCCC-EEEEEEEEEEEECCceEEEEEEccCHHHHHHHHhcccccHHHH
Confidence 99999999971 1256677778886555557777 9999999999999987654444 565555555 6666
Q ss_pred cccccceeEEEecCCCceeeeeccccCCCCCCCCcccccCc--------cchhH--H----HHHHhhhcHHHHhhccccC
Q 009245 261 GHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPF--------RPMLS--V----AMAVVRATEENQESLRDAD 326 (539)
Q Consensus 261 ~~~~~~~~~~w~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~--------~~~~~--~----~~~~~r~~~~~~~~~~~~~ 326 (539)
.+++++.+++|+|+.+.+++.+..+.+...++ .++.-.+ +|... . .......+.+.+ ..
T Consensus 252 ~~~~~~~e~~~~p~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~-----~~ 324 (561)
T 2i0k_A 252 VAESGGAEAIWYPFTEKPWMKVWTVSPTKPDS--SNEVGSLGSAGSLVGKPPQAREVSGPYNYIFSDNLPEPI-----TD 324 (561)
T ss_dssp HHHHSEEEEEECTTCSCCEEEEEEEC----------------------CCCTTSEECSSSCCCHHHHSCCHHH-----HH
T ss_pred HhcCCceEEEEccCCCeEEEEEEeCCCCCccc--cccccccccccccccCCcccccccccccchhhhhhhHHH-----HH
Confidence 77788999999999998886665443321111 0000000 00000 0 000000000000 00
Q ss_pred ccccccchhhhh---hhhhhcccccCC-eeeeccccccccccccccccccccccccccccccCCCcccCcceeeeEEEE-
Q 009245 327 GKCIGGKLVTST---LNAFAFGLTNDG-VVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSV- 401 (539)
Q Consensus 327 ~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i- 401 (539)
..|...+..+.. +..+.++..+.+ ..+...+.++++++++.. | ..++.+|+++||+|
T Consensus 325 ~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--~----------------~~~~~~f~~~e~av~ 386 (561)
T 2i0k_A 325 MIGAINAGNPGIAPLFGPAMYEITKLGLAATNANDIWGWSKDVQFY--I----------------KATTLRLTEGGGAVV 386 (561)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCC--C----------------CTTSCCCEEEEEEEE
T ss_pred HHHHHhccCcccchHHHHHHHHhhccccccccCcceEeechHhhee--e----------------cCCCceEEEEEEEEc
Confidence 111111111111 112222211110 011223578888888521 0 11234689999999
Q ss_pred -echhHHHHHHHHHHHHHhCcc---ccccceeeeeEEEEEecCCCCCC-----------C---C--CC---C-eEEEEEE
Q 009245 402 -ALSVVKNFIQDIQKLVQMEPK---ALCGLELYNGIIMRYVKASNAYL-----------G---K--QE---D-SLDFDIM 457 (539)
Q Consensus 402 -P~~~~~~~l~~v~~~~~~~~~---~~~~~~~~~pi~~Rfv~~d~~~L-----------s---~--~~---d-~~~i~i~ 457 (539)
|++++.++|+++++++++.+. ..|+..+++|||+||+++|++|| | | ++ | +|||+|+
T Consensus 387 ~P~~~~~~~l~~l~~~i~~~~~~~~~~~~~~~~~pve~R~~~~d~~~L~~~~~~~~~~lS~~~p~~g~~~~~~t~~id~~ 466 (561)
T 2i0k_A 387 TSRANIATVINDFTEWFHERIEFYRAKGEFPLNGPVEIRCCGLDQAADVKVPSVGPPTISATRPRPDHPDWDVAIWLNVL 466 (561)
T ss_dssp ECGGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCEEEEEEECCCGGGCCSCCSCSCSSCTTCCCTTCTTCCEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhchhhhhhcCCceeeccEEEEEecCchhhhccccccCCcccccccCCCCCCCCCeEEEEEEE
Confidence 999999999999999986532 23567889999999999999999 5 3 23 6 9999999
Q ss_pred EeccCCCCCccccH-HHHHHHHHHHHhh-cCC-----ccccccCCCccch------hHH----HhC-------CCHHHHH
Q 009245 458 YYRSKDPMAPRLYE-DVLEEIEQLAVFK-YGG-----LPHWGKNRNLVFD------GVI----KKY-------KNAGEFL 513 (539)
Q Consensus 458 ~~~~~~~~~~~~~~-~~~~~ie~~~~~~-~gG-----RPHWgK~~~~~~~------~l~----~~Y-------P~~~~F~ 513 (539)
+|++.+ +. +||+++|+| +.+ ||| ||||||+|.++++ +++ ++| |+|++|+
T Consensus 467 ~y~~~~------~~~~~~~~~e~i-~~~~~gG~~~~~RphWaK~~~~~~~~~~~~~~~~~~y~~~Yg~~~~~~p~~~~f~ 539 (561)
T 2i0k_A 467 GVPGTP------GMFEFYREMEQW-MRSHYNNDDATFRPEWSKGWAFGPDPYTDNDIVTNKMRATYIEGVPTTENWDTAR 539 (561)
T ss_dssp ECTTCT------THHHHHHHHHHH-HHHHSBSSSEEEECCTTSCCSCSSSTTCCHHHHHTHHHHHTTTTSCTTSSHHHHH
T ss_pred ecCCCC------cHHHHHHHHHHH-HHHhcCCCcCCCCCcccccCCccccccccHHHHHHHHHhhhccccCCCCCHHHHH
Confidence 998764 55 799999999 566 999 9999999999988 899 778 9999999
Q ss_pred HHHHhcCCCCCCcchhhhhhcC
Q 009245 514 KVKQKFDPLGLFSSEWTDQMLG 535 (539)
Q Consensus 514 ~~r~~~DP~g~F~n~~~~~llg 535 (539)
++|+++||+|+|+|+|+++|||
T Consensus 540 ~~r~~~DP~g~F~n~~~~rll~ 561 (561)
T 2i0k_A 540 ARYNQIDPHRVFTNGFMDKLLP 561 (561)
T ss_dssp HHHHHHCTTCCSCCHHHHHHCC
T ss_pred HHHHhcCCCCccCCHHHHHhcC
Confidence 9999999999999999999997
No 4
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=3.3e-60 Score=503.16 Aligned_cols=408 Identities=20% Similarity=0.273 Sum_probs=324.1
Q ss_pred ccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCCE
Q 009245 50 SYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMT 129 (539)
Q Consensus 50 ~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~~ 129 (539)
.|+||++++.+.|..+++|+|++||+++|+.| .+++++ |||||+++++++ +.++++|||++||+++++|+++++
T Consensus 9 ~~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~-G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~ 82 (422)
T 2vfr_A 9 TVTNWAGNITYTAKELLRPHSLDALRALVADS----ARVRVL-GSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAART 82 (422)
T ss_dssp CCBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEEC-SSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTE
T ss_pred eeecCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEE-ECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCE
Confidence 37899999999999999999999999999998 789999 889999988873 456999999999999899999999
Q ss_pred EEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcC
Q 009245 130 VTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLN 209 (539)
Q Consensus 130 vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~ 209 (539)
|+|+||+++.+|.++|.++|+.++..++++.+||||++++|+||.+. ++|.++|+|+++++|++||+ +++++
T Consensus 83 v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~~--~~G~~~d~v~~~~vv~~~G~------~~~~~ 154 (422)
T 2vfr_A 83 VRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSGV--GNGSLASVVREVELVTADGS------TVVIA 154 (422)
T ss_dssp EEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCCT--TCCCGGGGEEEEEEECTTSC------EEEEE
T ss_pred EEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCCc--ccCcHHHheEEEEEEeCCCC------EEEeC
Confidence 99999999999999999999999877888889999999999999884 68999999999999999999 88888
Q ss_pred CCcccccccccccccceeeEEeEEEeEEcCcccEEEE-ecCcchHH-HHHHHhcccccceeEEEecCCCc--eeeeeccc
Q 009245 210 ESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYV-QKSDSDLG-DQAAIFGHRHEFADITWYPSQRK--AAYRVDDR 285 (539)
Q Consensus 210 ~~~~df~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~w~p~~~~--~~~~~~~~ 285 (539)
+++..|++.+|++|++||||++|||+.|.++...... ..+.+++. +.+.++...+.+++++| |..+. ++....++
T Consensus 155 ~~~~~f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~ 233 (422)
T 2vfr_A 155 RGDERFGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAYSVSLFT-DWRAPGFRQVWLKRR 233 (422)
T ss_dssp TTSTTGGGTSSCTTTTCEEEEEEEECEECCEEEEEEEEEECSTTCCHHHHHHHHTSSSEEEEEE-CSSSSSEEEEEEEEE
T ss_pred CCCCCcceEEecCCCCEEEEEEEEEEEecCceEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEe-cCCCceeEEEEecCc
Confidence 7433399999999999999999999999988654433 56778888 88888888888999999 99887 55555444
Q ss_pred cCCCCCCCCcccccCccchhHHHHHHhhhcHHHHhhccccCccccccchhhhhhhhhhcccccCCeeeeccccccccccc
Q 009245 286 ISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRL 365 (539)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~i 365 (539)
.+.+.+. + .+ .+ ..|......+.... ..+. .....+++++++
T Consensus 234 ~~~~~~~-~--~~-----------------~~---------~~~~~~~~~p~~~~---~~~~------~~~~~~~~~~~~ 275 (422)
T 2vfr_A 234 TDRPLDG-F--PY-----------------AA---------PAAEKMHPVPGMPA---VNCT------EQFGVPGPWHER 275 (422)
T ss_dssp TTSCCCC-C--TT-----------------SE---------ECSSCCCSSTTSCG---GGBC------CCTTCCEEGGGT
T ss_pred CCCCCCC-c--hH-----------------HH---------HHHhhcccCcccCh---hhhc------ccCCccccHHHh
Confidence 3222110 0 00 00 00100011111100 0000 011134445555
Q ss_pred cccccccccccccccccccCCCcccCcceeeeEEEEechhHHHHHHHHHHHHHhCccccccceeeeeEEEEEecCCCCCC
Q 009245 366 QSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYL 445 (539)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~iP~~~~~~~l~~v~~~~~~~~~~~~~~~~~~pi~~Rfv~~d~~~L 445 (539)
+.. . ...|.|. ...++++|++||++++.++|+++++++++ . ...++|+++||+++|+.||
T Consensus 276 ~~~-~-----------~~~~~p~--~~~~~~~e~avP~e~~~~~l~~l~~~~~~-~-----~~~~~~v~~r~~~~~~~~L 335 (422)
T 2vfr_A 276 LPH-F-----------RAEFTPS--SGAELQSEYLMPREHALAALHAMDAIRET-L-----APVLQTCEIRTVAADAQWL 335 (422)
T ss_dssp SSS-B-----------CTTCCCS--CCSCEEEEEEEEGGGHHHHHHHHHHTHHH-H-----GGGEEEEEEEEECCBCSTT
T ss_pred ccc-c-----------cccccCC--cccEEEEEEEEEHHHHHHHHHHHHHHHHh-C-----CCceeeEEEEeecCCcccc
Confidence 421 0 1124433 24688999999999999999999999987 2 2457999999999999999
Q ss_pred CCC--CCeEEEEEEEeccCCCCCccccHHHHHHHHHHHHhhcCCccccccCCCccchhHHHhCCCHHHHHHHHHhcCCCC
Q 009245 446 GKQ--EDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLG 523 (539)
Q Consensus 446 s~~--~d~~~i~i~~~~~~~~~~~~~~~~~~~~ie~~~~~~~gGRPHWgK~~~~~~~~l~~~YP~~~~F~~~r~~~DP~g 523 (539)
|+. ++++ +++++.+.+ ...+++|++++|++ +.+|||||||||++.+++++++++||+|++|+++|+++||+|
T Consensus 336 s~~~~r~~~--~l~~~~~~~---~~~~~~~~~~~~~l-v~~~gG~~~wgk~~~~~~~~~~~~Yp~~~~f~~vk~~~DP~g 409 (422)
T 2vfr_A 336 SPAYGRDTV--AAHFTWVED---TAAVLPVVRRLEEA-LVPFAARPHWGKVFTVPAGELRALYPRLADFGALAGALDPAG 409 (422)
T ss_dssp CTTBTSCEE--EEEEEECSC---HHHHHHHHHHHHHH-HGGGTCEECTTSCCCCCHHHHHTTCTTHHHHHHHHHHHCTTC
T ss_pred CCCCCCCeE--EEEEecCCC---chhHHHHHHHHHHH-HHHcCCcccccccCCCCHHHHHHHCcCHHHHHHHHHHhCCCC
Confidence 984 8887 666666543 22355899999998 799999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhcCC
Q 009245 524 LFSSEWTDQMLGL 536 (539)
Q Consensus 524 ~F~n~~~~~llg~ 536 (539)
+|.|+|++++||+
T Consensus 410 ~f~n~~~~r~~~~ 422 (422)
T 2vfr_A 410 KFTNAFVRGVLAG 422 (422)
T ss_dssp TTCCHHHHHHHC-
T ss_pred ccCCHHHHHhhCC
Confidence 9999999999974
No 5
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=6.5e-38 Score=335.47 Aligned_cols=407 Identities=14% Similarity=0.137 Sum_probs=266.6
Q ss_pred cccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCC
Q 009245 47 ITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQ 126 (539)
Q Consensus 47 ~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~ 126 (539)
+.....+|+.+..+.|.+++.|+|++||+++|+.|+++++++.++ ||||++.+.+. ..++++|||++||+| ++|++
T Consensus 24 y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~--~~~gvvi~l~~l~~i-~~d~~ 99 (459)
T 2bvf_A 24 FDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVR-SGGHNPNGYAT--NDGGIVLDLRLMNSI-HIDTA 99 (459)
T ss_dssp HHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTC--CSSSEEEECTTCCCE-EEETT
T ss_pred HHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-cCCcCCCCccc--cCCeEEEECCCCCCE-EECCC
Confidence 444457899999999999999999999999999999999999999 78998876542 346899999999996 89999
Q ss_pred CCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEE
Q 009245 127 AMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVR 206 (539)
Q Consensus 127 ~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~ 206 (539)
+++|+|+||++|.+|.++|.++|++++. +....++|||++.+|+||.... +||.++|+|+++++|++||+ ++
T Consensus 100 ~~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~-~~G~~~d~v~~~~vV~~~G~------i~ 171 (459)
T 2bvf_A 100 GSRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTP-KYGLASDNILGATLVTATGD------VI 171 (459)
T ss_dssp TTEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EE
T ss_pred CCEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccc-cccCHhHhEEEEEEEcCCCe------EE
Confidence 9999999999999999999999999987 4445689999999999997665 68999999999999999999 88
Q ss_pred EcCC-Cccc-ccccccccccceeeEEeEEEeEEcC-cccEEEEecCcch-----HHHHHHHhccc-ccce--eEEEecCC
Q 009245 207 VLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLF-KRSIAYVQKSDSD-----LGDQAAIFGHR-HEFA--DITWYPSQ 275 (539)
Q Consensus 207 ~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~-~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~--~~~w~p~~ 275 (539)
++++ +++| |++++||.|+|||||++|||+.|.+ .........+.++ +.+.+.++... .+.. .+ ..|..
T Consensus 172 ~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 250 (459)
T 2bvf_A 172 YCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEMADHIYPSV-FVGVD 250 (459)
T ss_dssp EEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTCCCEE-EEEEC
T ss_pred EeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhCcHhhcccc-ccCcc
Confidence 8876 5688 9999999999999999999999994 4443333344433 33344444332 1111 11 11110
Q ss_pred --CceeeeeccccCCCCCCCCcccccCccchhHHHHHHhhhcHHHHhhccccCccccccchhhhhhhhhhcccccCCeee
Q 009245 276 --RKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVF 353 (539)
Q Consensus 276 --~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (539)
...... -...+..... .....++. +.... + . ..+. ...
T Consensus 251 ~~~~~~~~---------------~~~~~~g~~~---~~~~~~~~-~~~~~---------~-------~----~~~~-~~~ 290 (459)
T 2bvf_A 251 ENRAPSVT---------------VCVGHLGGLD---IAERDIAR-LRGLG---------R-------T----VSDS-IAV 290 (459)
T ss_dssp TTCCEEEE---------------EEEECCSCHH---HHHHHHHH-HHTTS---------C-------C----SEEC-CEE
T ss_pred cCCCceEE---------------EEEEEeCCHH---HHHHHHHH-HHHhC---------c-------c----hhcc-eee
Confidence 000000 0000111100 00111111 00000 0 0 0000 000
Q ss_pred eccccccccccccccccccccccccccccccCCCcccCcceee-eEEEEechhHHHHHHHHHHHHHhCccccccceeeee
Q 009245 354 AGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQ-TTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNG 432 (539)
Q Consensus 354 ~~~~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~iP~~~~~~~l~~v~~~~~~~~~~~~~~~~~~p 432 (539)
..+ ..+ ... .... +..... ...+++ .++.+|.+...++++++.+.+...+.. ...+.
T Consensus 291 ~~~--~~~-~~~-~~~~------------~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~ 348 (459)
T 2bvf_A 291 RSY--DEV-VAL-NAEV------------GSFEDG--MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPAS----GGSVK 348 (459)
T ss_dssp ECH--HHH-HHH-HHHH------------SCCCCS--CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTT----TEEEE
T ss_pred cCH--HHH-Hhc-cccc------------ccCCCC--CcceEeccccccCCCCCHHHHHHHHHHHhhCCCC----CceeE
Confidence 000 000 000 0000 000000 113444 688888776777887777766543201 01357
Q ss_pred EEEEEecCCCCCCCC--CCCeEEEEEEEeccCCCCCccccHHHHHHHHHHHHhhcCCccccccCCCcc----chhHHHhC
Q 009245 433 IIMRYVKASNAYLGK--QEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLV----FDGVIKKY 506 (539)
Q Consensus 433 i~~Rfv~~d~~~Ls~--~~d~~~i~i~~~~~~~~~~~~~~~~~~~~ie~~~~~~~gGRPHWgK~~~~~----~~~l~~~Y 506 (539)
+++|-.+.++.+.++ .|++.++.+..+-..+......+.++++++++. +.++.+|||||+..++. ++..++.|
T Consensus 349 ~~~~gg~~~~~~~ta~~~R~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-l~~~~~~p~~g~Y~N~~d~~~~~~~~~~y 427 (459)
T 2bvf_A 349 LEIEGMPFGNPKRTPARHRDAMGVLALAEWSGAAPGSEKYPELARELDAA-LLRAGVTTSGFGLLNNNSEVTAEMVAEVY 427 (459)
T ss_dssp EEEECCCCCCTTCCSSCCCSSCEEEEEEEECTTSTTTTHHHHHHHHHHHH-HHHTTCEEEEECCGGGCSSCCHHHHHHHH
T ss_pred EEEeCCccCCCCCCCcccCCcceEEEEEEeCCCccchHHHHHHHHHHHHH-hcccccCCCCCeeeCCCCCcchHHHHHHh
Confidence 788822223344443 488766665554332210122356788888887 79999999999988772 45566778
Q ss_pred -CC-HHHHHHHHHhcCCCCCCcchh
Q 009245 507 -KN-AGEFLKVKQKFDPLGLFSSEW 529 (539)
Q Consensus 507 -P~-~~~F~~~r~~~DP~g~F~n~~ 529 (539)
|+ +++++++|++|||+|+|.+..
T Consensus 428 G~~n~~rL~~iK~kyDP~~vF~~~~ 452 (459)
T 2bvf_A 428 KPEVYSRLAAVKREYDPENRFRHNY 452 (459)
T ss_dssp CHHHHHHHHHHHHHHCTTCCCCSSS
T ss_pred CcchHHHHHHHHHHhCcccccCCCC
Confidence 77 999999999999999999864
No 6
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=9.7e-36 Score=331.05 Aligned_cols=210 Identities=20% Similarity=0.174 Sum_probs=176.3
Q ss_pred cccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccC---CCCcEEEEcCCCCCce
Q 009245 45 CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPA---GQEGLLISTKHLNRVL 121 (539)
Q Consensus 45 ~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~---~~~gv~I~l~~l~~ii 121 (539)
.++.+-+..|.+.+...|.+|++|+|++||+++|++|++++++|.++ |||||.++.+.+. ..++|+|||++||+|+
T Consensus 189 ~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvpr-GgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIl 267 (658)
T 4bby_A 189 HCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPI-GGGTSVSYGLMCPADETRTIISLDTSQMNRIL 267 (658)
T ss_dssp SCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTCCCTTCCSCEEEEECTTCCCEE
T ss_pred CCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEE-CCCcCCCCCCCCCCCCCCcEEEEECccCCCcE
Confidence 33444456688899999999999999999999999999999999999 7888876654432 2457999999999999
Q ss_pred EeeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccc-cccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcc
Q 009245 122 KLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYW-WGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEE 200 (539)
Q Consensus 122 ~id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~-~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~ 200 (539)
+||+++++++||||+++.+|.++|.++|+.++..|+. ..+||||+++||++|.... +||.+.|+|+++|+|++||+
T Consensus 268 eiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~-rYG~~~d~VlgleVVlpdG~-- 344 (658)
T 4bby_A 268 WVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKN-IYGNIEDLVVHMKVVTPRGV-- 344 (658)
T ss_dssp EEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEE--
T ss_pred EEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCcc-CcCCHHHheeeEEEEeCCCc--
Confidence 9999999999999999999999999999999998864 4589999999999999877 79999999999999999998
Q ss_pred cceeEEEcCC-----Cccc-ccccccccccceeeEEeEEEeEEcCcccE--EEEecCcchHHHHHHHhcc
Q 009245 201 EFVNVRVLNE-----SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSI--AYVQKSDSDLGDQAAIFGH 262 (539)
Q Consensus 201 ~~~~v~~~~~-----~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 262 (539)
+.+... ..+| ++.++||+|+|||||++|||+.|.++... ...+.+.++..+.+.++.+
T Consensus 345 ----i~~~~~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~ 410 (658)
T 4bby_A 345 ----IEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAK 410 (658)
T ss_dssp ----EECSCCCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred ----ccccccccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHH
Confidence 655432 2367 88899999999999999999999998543 2333455556666655554
No 7
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.2e-34 Score=304.08 Aligned_cols=204 Identities=23% Similarity=0.222 Sum_probs=173.0
Q ss_pred ccc-CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCC
Q 009245 49 NSY-GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQA 127 (539)
Q Consensus 49 ~~~-~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~ 127 (539)
..| .+|+......|.+|++|+|++||+++|+.|+++++++.++ ||||++.+.+.+ ..++++|||++||+++++|+++
T Consensus 38 ~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~-GgGt~~~g~~~~-~~ggvvIdl~~m~~i~~id~~~ 115 (476)
T 3pm9_A 38 EAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQ-GGNTGLVGGQTP-HNGEVVISLKRMDKIREIDTSS 115 (476)
T ss_dssp HHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEE-SSSCCSSSTTCC-CSSCEEEECTTCCCEEEEETTT
T ss_pred HHHhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCccC-CCCcEEEEeeCCCceEEEcCCC
Confidence 344 4898888899999999999999999999999999999999 788988777765 3459999999999998999999
Q ss_pred CEEEEcCCCCHHHHHHHHHHcCCccCCcccc-cccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEE
Q 009245 128 MTVTVESGVTLRQVIEESAKAGLALPYGPYW-WGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVR 206 (539)
Q Consensus 128 ~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~-~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~ 206 (539)
.+|+|+||+++.+|.++|.++|+.++..+.. ..+||||++++|+||.+.. +||.++|+|+++++|++||+ ++
T Consensus 116 ~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~V~~levV~~dG~------v~ 188 (476)
T 3pm9_A 116 NTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAAL-AYGLARDMALGVEVVLADGR------VM 188 (476)
T ss_dssp TEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEECTTSC------EE
T ss_pred CeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCccc-ccCcHHHheeEEEEEccCCe------EE
Confidence 9999999999999999999999998876653 4689999999999999876 68999999999999999999 77
Q ss_pred EcCC------Cccc-ccccccccccceeeEEeEEEeEEcCcccE--EEEecCcchHHHHHHHhc
Q 009245 207 VLNE------SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSI--AYVQKSDSDLGDQAAIFG 261 (539)
Q Consensus 207 ~~~~------~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~ 261 (539)
+++. ..+| +++++||.|+|||||++|||+.|.++... ...+.+.+++.+.+.++.
T Consensus 189 ~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 252 (476)
T 3pm9_A 189 NLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQ 252 (476)
T ss_dssp ECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred EcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHH
Confidence 6542 2356 78888999999999999999999987532 223334555555555544
No 8
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=6.7e-33 Score=299.67 Aligned_cols=181 Identities=18% Similarity=0.234 Sum_probs=159.0
Q ss_pred CCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCccc--CCCCcEEEEcCCCCCceEeeCCCCEE
Q 009245 53 MFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCP--AGQEGLLISTKHLNRVLKLDVQAMTV 130 (539)
Q Consensus 53 nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~--~~~~gv~I~l~~l~~ii~id~~~~~v 130 (539)
+|+.....+|.+|++|+|++||+++|++|++++++|.++ +||||+.+.+.. ...++++|||++||+ +++|++++++
T Consensus 44 rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r-~gGh~~~g~s~~~~~~~~~~~idl~~~~~-v~~d~~~~~~ 121 (500)
T 3tsh_A 44 RWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVR-SGGHDYEGLSYRSLQPETFAVVDLNKMRA-VWVDGKARTA 121 (500)
T ss_dssp TTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCTTCTTTCCSSSCCEEEEECTTCCC-EEEETTTTEE
T ss_pred cccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEE-cCCcCCCCCcCCCCCcCCeEEEECcCCCC-EEECCCCCEE
Confidence 499888999999999999999999999999999999999 799998776532 134689999999998 5999999999
Q ss_pred EEcCCCCHHHHHHHHHHcCCccCCcc-cccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcC
Q 009245 131 TVESGVTLRQVIEESAKAGLALPYGP-YWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLN 209 (539)
Q Consensus 131 tv~aGv~l~~l~~~l~~~Gl~l~~~~-~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~ 209 (539)
+|+||+++.||+++|.++|+.+...+ ....+++||.+++|+||.... +||..+|+|++++||++||+ +++.+
T Consensus 122 ~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~-~~G~~~d~v~~~~vV~a~G~------i~~~~ 194 (500)
T 3tsh_A 122 WVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLR-KYGIAAENVIDVKLVDANGK------LHDKK 194 (500)
T ss_dssp EEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EECHH
T ss_pred EEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCcccc-ccCChhhheeeEEEECCCce------EEECC
Confidence 99999999999999999997655433 345678999999999998776 78999999999999999998 87766
Q ss_pred CCccc-ccccc-cccccceeeEEeEEEeEEcCccc
Q 009245 210 ESHQD-FYAAK-VSLGVLGVISQVTLKLEPLFKRS 242 (539)
Q Consensus 210 ~~~~d-f~a~~-gs~G~lGiIt~vtl~l~p~~~~~ 242 (539)
..++| ||+++ |+.|+|||||++|||++|.++..
T Consensus 195 ~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~ 229 (500)
T 3tsh_A 195 SMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTV 229 (500)
T ss_dssp HHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCE
T ss_pred CCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeE
Confidence 66667 99998 56779999999999999998754
No 9
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.2e-32 Score=297.86 Aligned_cols=203 Identities=20% Similarity=0.263 Sum_probs=173.4
Q ss_pred cccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHH--c-CCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCc-----
Q 009245 49 NSYGMFPDRSVCKAANVAYPASEQELISIVAAAAM--T-KTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRV----- 120 (539)
Q Consensus 49 ~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~--~-~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~i----- 120 (539)
....+|++...+.|.+|++|+|++||+++|+.|++ + +++|.++ ||||++.+.+.+ .++++|||++||+|
T Consensus 56 ~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~-G~G~~~~g~~~~--~~gvvi~l~~m~~i~~~~~ 132 (534)
T 1w1o_A 56 AASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR-GRGHSLMGQAFA--PGGVVVNMASLGDAAAPPR 132 (534)
T ss_dssp HTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE-SSCCCSSSTTCC--TTSEEEEGGGGGCSSSSCS
T ss_pred HHhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCCCCCcCC--CCeEEEECccccccccCcc
Confidence 33468988888999999999999999999999998 6 8999999 789988776654 36899999999998
Q ss_pred eEeeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcc
Q 009245 121 LKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEE 200 (539)
Q Consensus 121 i~id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~ 200 (539)
+++|+++.+|+|+||+++.+|.+++.++|+.++..++...+||||++++|++|.... +||.++|+|+++++|++||+
T Consensus 133 ~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~-~yG~~~d~v~~~evV~~dG~-- 209 (534)
T 1w1o_A 133 INVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF-RHGPQISNVLEMDVITGHGE-- 209 (534)
T ss_dssp EEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH-HHCCGGGSEEEEEEEETTSC--
T ss_pred EEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccccc-ccccHhhhEEEEEEEeCCcc--
Confidence 899998899999999999999999999999877777777899999999999987665 68999999999999999999
Q ss_pred cceeEEEcCC-Cccc-ccccccccccceeeEEeEEEeEEcCcccE--EEEecCcchHHHHHHHhc
Q 009245 201 EFVNVRVLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSI--AYVQKSDSDLGDQAAIFG 261 (539)
Q Consensus 201 ~~~~v~~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~ 261 (539)
+++++. +++| |++.+||.|+|||||++|||+.|.++... ...+.+.+++.+....+.
T Consensus 210 ----v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (534)
T 1w1o_A 210 ----MVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLT 270 (534)
T ss_dssp ----EEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred ----EEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHHH
Confidence 888876 5688 99999999999999999999999987532 233445445544444433
No 10
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.3e-30 Score=278.95 Aligned_cols=189 Identities=16% Similarity=0.149 Sum_probs=166.1
Q ss_pred cccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEee
Q 009245 45 CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLD 124 (539)
Q Consensus 45 ~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id 124 (539)
..+.+....|+.+..++|.+|++|+|++||+++|++|++++++|+++ ||||++.+.+.....++++|||++||+|.++|
T Consensus 20 ~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd 98 (473)
T 3rja_A 20 ADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAK-SGGHSYASFGFGGENGHLMVQLDRMIDVISYN 98 (473)
T ss_dssp HHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCTTCGGGTSSSSCEEEECTTCCCEEEEE
T ss_pred CchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-cCCCCCCCCcccCCCCeEEEECCCCCceEEEc
Confidence 34444457898889999999999999999999999999999999999 78898875544333567999999999987799
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHcC-CccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccce
Q 009245 125 VQAMTVTVESGVTLRQVIEESAKAG-LALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFV 203 (539)
Q Consensus 125 ~~~~~vtv~aGv~l~~l~~~l~~~G-l~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~ 203 (539)
+++++|+|+||+++.+|.++|.++| +.++. +....++|||.+++|++|.... ++|.++|+|+++++|+++|+
T Consensus 99 ~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~-~~G~~~D~v~~~~vV~a~G~----- 171 (473)
T 3rja_A 99 DKTGIAHVEPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSH-MHGLAVDSVVGVTVVLADGR----- 171 (473)
T ss_dssp TTTTEEEECTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC-----
T ss_pred CCCCEEEECCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccc-cccchHhheeeEEEEecCCe-----
Confidence 9999999999999999999999999 77775 4456689999999999998765 68999999999999999999
Q ss_pred eEEEcCC-Cccc-ccccccccccceeeEEeEEEeEEcCccc
Q 009245 204 NVRVLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRS 242 (539)
Q Consensus 204 ~v~~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~ 242 (539)
++++++ +++| ||+.+|+.|+|||||+++||+.|.++..
T Consensus 172 -v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~ 211 (473)
T 3rja_A 172 -IVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVL 211 (473)
T ss_dssp -EEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCE
T ss_pred -EEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCce
Confidence 888876 5778 9999999999999999999999998743
No 11
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.98 E-value=9.2e-31 Score=283.76 Aligned_cols=201 Identities=22% Similarity=0.287 Sum_probs=168.3
Q ss_pred cCCCCCCCccCccEEEeCCCHHHHHHHHHHHHH-cCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeC----
Q 009245 51 YGMFPDRSVCKAANVAYPASEQELISIVAAAAM-TKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDV---- 125 (539)
Q Consensus 51 ~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~-~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~---- 125 (539)
..+|++.....|.+|++|+|++||+++|+.|++ ++++|.++ |||||+.+.+.+. ++++|||++||+| ++|.
T Consensus 51 ~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~-GgGts~~g~~~~~--~gvvidl~~m~~i-~i~~~~~~ 126 (524)
T 2exr_A 51 GRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAAR-GNGHSINGQAMAE--GGLVVDMSTTAEN-HFEVGYLS 126 (524)
T ss_dssp TCCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEE-SSSCCSSSTTCCT--TSEEEEGGGGTTS-CEEEEECC
T ss_pred hccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEE-CCCcCCCCcccCC--CEEEEECcCCCCc-EEeecccC
Confidence 367888788899999999999999999999996 99999999 7899887766542 6899999999998 7776
Q ss_pred -CC--CEEEEcCCCCHHHHHHH-HHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCccc
Q 009245 126 -QA--MTVTVESGVTLRQVIEE-SAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEE 201 (539)
Q Consensus 126 -~~--~~vtv~aGv~l~~l~~~-l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~ 201 (539)
+. .+|+|+||+++.++.+. +.++|+.++..++...+||||++++|++|.... +||.++|+|+++++|+++|+
T Consensus 127 ~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~-~yG~~~d~V~~l~vV~~dG~--- 202 (524)
T 2exr_A 127 GGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAF-RYGPQTSNVTELDVVTGNGD--- 202 (524)
T ss_dssp SSSSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHH-HHCCGGGSEEEEEEEETTSC---
T ss_pred CCCCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCccccc-ccCcHhhhEEEEEEEecCCe---
Confidence 55 79999999999998555 559999966655666799999999998776655 68999999999999999999
Q ss_pred ceeEEEcCC-Cccc-ccccccccccceeeEEeEEEeEEcCccc--EEEEecCcchHHHHHHHhcc
Q 009245 202 FVNVRVLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRS--IAYVQKSDSDLGDQAAIFGH 262 (539)
Q Consensus 202 ~~~v~~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~--~~~~~~~~~~~~~~~~~~~~ 262 (539)
+++++. .++| |++++||+|+|||||++||++.|.++.. ....+.+.++..+.+..+.+
T Consensus 203 ---v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~ 264 (524)
T 2exr_A 203 ---VVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVS 264 (524)
T ss_dssp ---EEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred ---EEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHH
Confidence 887776 5678 9999999999999999999999998853 23445566666666665554
No 12
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=1.4e-30 Score=284.79 Aligned_cols=203 Identities=19% Similarity=0.207 Sum_probs=168.2
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCC--CCcEEEEcCCCCCceEeeCCCCE
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAG--QEGLLISTKHLNRVLKLDVQAMT 129 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~--~~gv~I~l~~l~~ii~id~~~~~ 129 (539)
..|.+.....|.+|++|+|++||+++|+.|++++++|.++ ||||++.+.+.+.. .++++|||++||+|+++|+++.+
T Consensus 128 ~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~-GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~ 206 (584)
T 2uuu_A 128 RVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPM-GGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMT 206 (584)
T ss_dssp HHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTE
T ss_pred hhccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCE
Confidence 3455556678999999999999999999999999999999 78888776665431 45789999999999899999999
Q ss_pred EEEcCCCCHHHHHHHHHHcCCccCCccc-ccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEE-
Q 009245 130 VTVESGVTLRQVIEESAKAGLALPYGPY-WWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRV- 207 (539)
Q Consensus 130 vtv~aGv~l~~l~~~l~~~Gl~l~~~~~-~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~- 207 (539)
|+|+||+++.+|.++|.++|+.++..|+ ...+||||++++|++|.... +||.++|+|+++++|+++|+ +++
T Consensus 207 v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~-~yG~~~d~V~~levVl~dG~------i~~~ 279 (584)
T 2uuu_A 207 ACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSD-KYGDIEDMAVSFRTVTPTGT------LELR 279 (584)
T ss_dssp EEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEE------ECCC
T ss_pred EEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCccccc-CcCcHHHheeeEEEEeCCCC------EEEC
Confidence 9999999999999999999999998886 45689999999999998776 57999999999999999998 554
Q ss_pred -c--CCCccc-ccccccccccceeeEEeEEEeEEcCccc--EEEEecCcchHHHHHHHhcc
Q 009245 208 -L--NESHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRS--IAYVQKSDSDLGDQAAIFGH 262 (539)
Q Consensus 208 -~--~~~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~--~~~~~~~~~~~~~~~~~~~~ 262 (539)
. +..++| +++++||.|+|||||++|||+.|.++.. ....+.+.+++.+.+.++.+
T Consensus 280 ~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 280 NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp -------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 1 124577 8888999999999999999999998743 23333455555565655543
No 13
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.98 E-value=5.9e-30 Score=274.62 Aligned_cols=182 Identities=23% Similarity=0.304 Sum_probs=161.4
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCCEEE
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVT 131 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~~vt 131 (539)
.+|++...+.|.+|++|+|++||+++|++|++++++|+++ ||||++.+.+...+.++++|||++|++| ++|+++++|+
T Consensus 36 ~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-GgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~ 113 (495)
T 3fw9_A 36 PLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLR-SGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAW 113 (495)
T ss_dssp GGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEE-SSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEE
Confidence 4798888999999999999999999999999999999999 7899988776544446899999999996 9999999999
Q ss_pred EcCCCCHHHHHHHHHHc--CCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcC
Q 009245 132 VESGVTLRQVIEESAKA--GLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLN 209 (539)
Q Consensus 132 v~aGv~l~~l~~~l~~~--Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~ 209 (539)
|+||+++.+|.++|.++ |++++. +....++|||.+++|++|.... ++|..+|+|+++++|+++|+ +++..
T Consensus 114 V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~-~~G~~~D~v~~~~vV~adG~------i~~~~ 185 (495)
T 3fw9_A 114 VESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSR-KYGLAADNVVDAILIDANGA------ILDRQ 185 (495)
T ss_dssp EETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EECHH
T ss_pred EcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCccccc-CCCchhheEEEEEEEcCCCC------EEEcC
Confidence 99999999999999999 777776 3445689999999999998776 78999999999999999998 77633
Q ss_pred CCccc-cccccc-ccccceeeEEeEEEeEEcCcccE
Q 009245 210 ESHQD-FYAAKV-SLGVLGVISQVTLKLEPLFKRSI 243 (539)
Q Consensus 210 ~~~~d-f~a~~g-s~G~lGiIt~vtl~l~p~~~~~~ 243 (539)
..++| |++.+| ++|+|||||++|||+.|.++...
T Consensus 186 ~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~ 221 (495)
T 3fw9_A 186 AMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVT 221 (495)
T ss_dssp HHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEE
T ss_pred CCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEE
Confidence 35678 999998 89999999999999999987543
No 14
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.97 E-value=1.4e-29 Score=274.39 Aligned_cols=180 Identities=21% Similarity=0.243 Sum_probs=153.8
Q ss_pred cccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEee
Q 009245 45 CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLD 124 (539)
Q Consensus 45 ~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id 124 (539)
..+.....+|+.+..+.|.+++.|+|++||+++|++|++++++|+++ ||||++.+.+.. ..++++|||++||+| ++|
T Consensus 42 ~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~~d 118 (530)
T 2y3s_A 42 IRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVR-SGGHCYEDFVAN-SDVRVVMDMSRLSAV-GFD 118 (530)
T ss_dssp TTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTC-TTCCEEEECTTCCCE-EEE
T ss_pred ccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-CCCCCCCCCccc-CCCeEEEEcccCCCE-EEc
Confidence 33444446788888899999999999999999999999999999999 788988775543 346899999999996 999
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHH-cCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEc--cCCCccc
Q 009245 125 VQAMTVTVESGVTLRQVIEESAK-AGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVT--PGNPEEE 201 (539)
Q Consensus 125 ~~~~~vtv~aGv~l~~l~~~l~~-~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~--~~G~~~~ 201 (539)
+++++|+|+||++|.+|.++|.+ +|+.++. +....++|||.+++|++|.... ++|.++|+|++++||+ ++|+
T Consensus 119 ~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~--- 193 (530)
T 2y3s_A 119 EERGAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSR-MHGSIVDYLHAVEVVVVDASGD--- 193 (530)
T ss_dssp TTTTEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC---
T ss_pred CCCCEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccc-cccchhhheeeEEEEEecCCCc---
Confidence 99999999999999999999985 9999887 4455689999999999998765 6899999999999999 5598
Q ss_pred ceeEEE--cCC--Cc--cc-ccccccc-cccceeeEEeEEEe
Q 009245 202 FVNVRV--LNE--SH--QD-FYAAKVS-LGVLGVISQVTLKL 235 (539)
Q Consensus 202 ~~~v~~--~~~--~~--~d-f~a~~gs-~G~lGiIt~vtl~l 235 (539)
++. +++ ++ .| ||+++|+ +|+|||||++|||+
T Consensus 194 ---i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 194 ---ARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp ---EEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred ---EEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEe
Confidence 633 343 23 35 9999975 79999999999999
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.97 E-value=1.6e-29 Score=271.90 Aligned_cols=180 Identities=19% Similarity=0.257 Sum_probs=157.6
Q ss_pred CCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCCEEEE
Q 009245 53 MFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTV 132 (539)
Q Consensus 53 nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~~vtv 132 (539)
+|+......|.+|++|+|++||+++|++|++++++|+++ ||||++.+.+...+.++++|||++||+| ++|+++++|+|
T Consensus 45 rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V 122 (518)
T 3vte_A 45 RFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTR-SGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWV 122 (518)
T ss_dssp GGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEE
T ss_pred ccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEE
Confidence 588888899999999999999999999999999999999 7899987765422356999999999995 89999999999
Q ss_pred cCCCCHHHHHHHHHHcC--CccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcCC
Q 009245 133 ESGVTLRQVIEESAKAG--LALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNE 210 (539)
Q Consensus 133 ~aGv~l~~l~~~l~~~G--l~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~~ 210 (539)
+||+++.+|.++|.++| +.++. +....++|||.+++|+||.... ++|.++|+|+++++|++||+ +++.+.
T Consensus 123 ~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgvgG~~~gGg~G~~s~-~~G~~~D~V~~~evV~adG~------iv~~~~ 194 (518)
T 3vte_A 123 EAGATLGEVYYWINEKNENLSFPG-GYCPTVGVGGHFSGGGYGALMR-NYGLAADNIIDAHLVNVDGK------VLDRKS 194 (518)
T ss_dssp ETTCBHHHHHHHHHHHCTTEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EECHHH
T ss_pred eCCccHHHHHHHHHHhCCCceecC-CCCCCeeeeeeeCCCCCccccC-CCCchhheEEEEEEEccCCe------EEEeec
Confidence 99999999999999975 55553 3335689999999999998765 68999999999999999998 776544
Q ss_pred Cccc-ccccccc-cccceeeEEeEEEeEEcCccc
Q 009245 211 SHQD-FYAAKVS-LGVLGVISQVTLKLEPLFKRS 242 (539)
Q Consensus 211 ~~~d-f~a~~gs-~G~lGiIt~vtl~l~p~~~~~ 242 (539)
+++| ||+++|| +|+|||||++|||+.|.++..
T Consensus 195 ~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~ 228 (518)
T 3vte_A 195 MGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKS 228 (518)
T ss_dssp HCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCE
T ss_pred cccchhhheecccCCCceEEEEEEEEEEeCCCeE
Confidence 5678 9999997 999999999999999998744
No 16
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.97 E-value=1.1e-28 Score=266.25 Aligned_cols=181 Identities=19% Similarity=0.205 Sum_probs=159.0
Q ss_pred ccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCCE
Q 009245 50 SYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMT 129 (539)
Q Consensus 50 ~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~~ 129 (539)
....|+.+..+.|.++++|+|++||+++|+.|+++++++.++ ||||++.+.+.....++++|||++||+| ++| ++++
T Consensus 31 ~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~~~~~~gvvIdl~~l~~i-~~d-~~~~ 107 (503)
T 1zr6_A 31 DGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAK-GGGHSYGSYGFGGEDGHLMLELDRMYRV-SVD-DNNV 107 (503)
T ss_dssp HTSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTTTSSSSCEEEECTTCCCE-EEC-TTSC
T ss_pred HhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCcccCCCCcEEEECccCCCE-EEC-CCCe
Confidence 346788888899999999999999999999999999999999 7899877654432345899999999996 999 8889
Q ss_pred EEEcCCCCHHHHHHHHHHcC-CccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEc
Q 009245 130 VTVESGVTLRQVIEESAKAG-LALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVL 208 (539)
Q Consensus 130 vtv~aGv~l~~l~~~l~~~G-l~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~ 208 (539)
|+|+||+++.+|.++|.++| ++++. +....++|||.+.+|++|.... ++|.++|+|++++||+++|+ ++++
T Consensus 108 v~v~aG~~~~~l~~~l~~~~gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~~vV~a~G~------i~~~ 179 (503)
T 1zr6_A 108 ATIQGGARLGYTALELLDQGNRALSH-GTCPAVGVGGHVLGGGYGFATH-THGLTLDWLIGATVVLADAS------IVHV 179 (503)
T ss_dssp EEEETTCBHHHHHHHHHHTTSEECCC-CSCTTSBHHHHHHHCCCSTTHH-HHCCGGGGEEEEEEECTTSC------EEEE
T ss_pred EEEecCCCHHHHHHHHHHcCCEEeCC-CCCCcCchhhhhcCCCCCcccc-cccChhheEEEEEEEecCCC------EEEe
Confidence 99999999999999997664 88876 3345678999999999998765 68999999999999999999 8888
Q ss_pred CC-Cccc-ccccccccccceeeEEeEEEeEEcCcc
Q 009245 209 NE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKR 241 (539)
Q Consensus 209 ~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~ 241 (539)
++ +++| |++++||.|+|||||++|||+.|.+..
T Consensus 180 ~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~ 214 (503)
T 1zr6_A 180 SETENADLFWALRGGGGGFAIVSEFEFNTFEAPEI 214 (503)
T ss_dssp BTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSC
T ss_pred CCCCCccHHHHHhccCCCcEEEEEEEEEEEecCce
Confidence 76 5788 999999999999999999999999864
No 17
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.97 E-value=2.9e-29 Score=269.90 Aligned_cols=181 Identities=17% Similarity=0.213 Sum_probs=154.4
Q ss_pred ccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeC
Q 009245 46 TITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDV 125 (539)
Q Consensus 46 ~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~ 125 (539)
.+.+...+|+.+..+.|.+|+.|+|++||+++|++|++++++|+++ ||||++.+.+.. ..++++|||++||+| ++|+
T Consensus 19 ~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~vd~ 95 (501)
T 3pop_A 19 RYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACR-SGGHCGQDFVGT-PRRDLVLDLHNLHAI-GPAA 95 (501)
T ss_dssp THHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTS-SCCSEEEECTTCCCE-EECT
T ss_pred chHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-eCCccCCCcccc-CCCEEEEEecccCCe-EEcC
Confidence 3444447798888999999999999999999999999999999999 789998776543 245899999999995 8999
Q ss_pred CCCEEEEcCCCCHHHHHHHHH-HcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEc--cCCCcccc
Q 009245 126 QAMTVTVESGVTLRQVIEESA-KAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVT--PGNPEEEF 202 (539)
Q Consensus 126 ~~~~vtv~aGv~l~~l~~~l~-~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~--~~G~~~~~ 202 (539)
++++|+|+||+++.+|.++|. ++|++++.. ....++|||.+++|+||.... ++|.++|+|+++++|+ ++|++
T Consensus 96 ~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G-~~~~vgvgG~~~gGg~G~~~~-~~G~~~D~v~~~evV~~da~G~~--- 170 (501)
T 3pop_A 96 DGAGVRVGSGATVDQVQKALFRRWNAALPLG-ACSAVGMGGLVAGGGYGPLSR-QLGLVVDHLHAVEVAVVDESRTV--- 170 (501)
T ss_dssp TSSSEEEETTCBHHHHHHHHHHHHSBCCCCC-SBTTCBHHHHHHHCCCCTTHH-HHCCGGGGEEEEEEEEECTTSCE---
T ss_pred CCCEEEEECCcCHHHHHHHHHhhcCeEeCCC-CCCCceEeeccccCCCccccc-ccccHHHhEEEEEEEEecCCCCE---
Confidence 999999999999999999997 579998763 345678999999999998765 6899999999999999 88971
Q ss_pred eeEEEcC----CCccc-ccccccc-cccceeeEEeEEEe
Q 009245 203 VNVRVLN----ESHQD-FYAAKVS-LGVLGVISQVTLKL 235 (539)
Q Consensus 203 ~~v~~~~----~~~~d-f~a~~gs-~G~lGiIt~vtl~l 235 (539)
.+++.+ .+++| ||+++|+ +|+|||||++|||+
T Consensus 171 -~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 171 -RLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp -EEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred -EEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 123431 24678 9999997 89999999999998
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.97 E-value=5.3e-28 Score=261.90 Aligned_cols=178 Identities=22% Similarity=0.269 Sum_probs=153.9
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCCEEE
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVT 131 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~~vt 131 (539)
..|+.+....|.+|+.|+|++||+++|++|+++++++.++ ||||++.+.+.. ..++++|||++||+| ++|+++++|+
T Consensus 48 ~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~g~~~~-~~~gvvIdl~~m~~i-~~d~~~~~v~ 124 (523)
T 2wdx_A 48 RGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVR-SGGHCFEDFVDN-PDVKVIIDMSLLTEI-AYDPSMNAFL 124 (523)
T ss_dssp CSSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCSSSSSSS-TTCCEEEECTTCCCE-EEETTTTEEE
T ss_pred hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-cCCCCCCCCccC-CCCeEEEEcccCCCE-EEcCCCCEEE
Confidence 6787778889999999999999999999999999999999 788988765543 246899999999996 9999999999
Q ss_pred EcCCCCHHHHHHHHH-HcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccC--CCcccceeEEEc
Q 009245 132 VESGVTLRQVIEESA-KAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPG--NPEEEFVNVRVL 208 (539)
Q Consensus 132 v~aGv~l~~l~~~l~-~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~--G~~~~~~~v~~~ 208 (539)
|+||++|.+|.++|. ++|+.++. +....++|||.+++|+||.... ++|.++|+|++++||++| |+ ++.+
T Consensus 125 v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------v~~~ 196 (523)
T 2wdx_A 125 IEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSR-QFGSVVDYLYAVEVVVVNKQGK------ARVI 196 (523)
T ss_dssp ECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EEEE
T ss_pred EcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccc-cccChhheEEEEEEEEecCCcc------EEEE
Confidence 999999999999998 59999887 4445689999999999998775 789999999999999955 87 5433
Q ss_pred --CC--C--ccc-cccccc-ccccceeeEEeEEEe-----------EEcCc
Q 009245 209 --NE--S--HQD-FYAAKV-SLGVLGVISQVTLKL-----------EPLFK 240 (539)
Q Consensus 209 --~~--~--~~d-f~a~~g-s~G~lGiIt~vtl~l-----------~p~~~ 240 (539)
++ + +.| ||+++| ++|+|||||++|||+ .|.++
T Consensus 197 ~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 197 VATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp EEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 43 2 345 999995 679999999999999 88765
No 19
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.97 E-value=7.4e-28 Score=260.79 Aligned_cols=184 Identities=19% Similarity=0.229 Sum_probs=156.3
Q ss_pred cccccc-CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEee
Q 009245 46 TITNSY-GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLD 124 (539)
Q Consensus 46 ~~~~~~-~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id 124 (539)
.+.... .+|+.+....|.+|+.|+|++||+++|++|+++++++.++ ||||++.+.+.. ..++++|||++||+| ++|
T Consensus 39 ~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~~d 115 (521)
T 2ipi_A 39 RYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVR-SGGHCFEGFVDD-PAVRAVIDMSQMRQV-FYD 115 (521)
T ss_dssp THHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCGGGC-TTCCEEEECTTCCCE-EEE
T ss_pred chHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCccc-CCCeEEEecccCCCe-EEe
Confidence 343444 6788888899999999999999999999999999999999 789988765543 346899999999996 999
Q ss_pred CCCCEEEEcCCCCHHHHHHHHH-HcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccC--CCccc
Q 009245 125 VQAMTVTVESGVTLRQVIEESA-KAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPG--NPEEE 201 (539)
Q Consensus 125 ~~~~~vtv~aGv~l~~l~~~l~-~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~--G~~~~ 201 (539)
+++++|+|+||++|.+|.++|. ++|++++...+ ..++|||.+++|++|.... ++|.++|+|++++||++| |+
T Consensus 116 ~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~-~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~--- 190 (521)
T 2ipi_A 116 SGKRAFAVEPGATLGETYRALYLDWGVTIPAGVC-PQVGVGGHVLGGGYGPLSR-RDGVVADHLYAVEVVVVDASGR--- 190 (521)
T ss_dssp TTTTEEEECTTSBHHHHHHHHHHHHSBCCCCCSC-TTCBHHHHTTTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC---
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHhcCceeCCCCC-CCcccCCcccCCCCCcccc-ccccHhhcEEEEEEEEecCCcc---
Confidence 9999999999999999999997 79999987443 4689999999999998765 689999999999999977 87
Q ss_pred ceeEEEc--CC--C--ccc-cccccc-ccccceeeEEeEEEe-----------EEcCc
Q 009245 202 FVNVRVL--NE--S--HQD-FYAAKV-SLGVLGVISQVTLKL-----------EPLFK 240 (539)
Q Consensus 202 ~~~v~~~--~~--~--~~d-f~a~~g-s~G~lGiIt~vtl~l-----------~p~~~ 240 (539)
++.+ ++ + +.| ||+++| ++|+|||||++|||+ .|.++
T Consensus 191 ---i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~ 245 (521)
T 2ipi_A 191 ---ARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAP 245 (521)
T ss_dssp ---EEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCC
T ss_pred ---EEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCC
Confidence 5332 32 2 345 999997 579999999999999 88765
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.2e-26 Score=253.63 Aligned_cols=189 Identities=17% Similarity=0.128 Sum_probs=151.3
Q ss_pred CCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCC-CCcccCCCCcEEEEc-CCCCCceEeeCCCCEEEEcC
Q 009245 57 RSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIP-KLVCPAGQEGLLIST-KHLNRVLKLDVQAMTVTVES 134 (539)
Q Consensus 57 ~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~-~~~~~~~~~gv~I~l-~~l~~ii~id~~~~~vtv~a 134 (539)
.....|.+|++|+|++||+++|+.|++++++|.++ |+||+.+ +...+...++++||| ++||+|+++|+++++|+|||
T Consensus 66 ~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~-g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~a 144 (560)
T 1e8g_A 66 QDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPI-SIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEP 144 (560)
T ss_dssp TTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECT
T ss_pred ccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEe-cCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeC
Confidence 45778999999999999999999999999999999 6667654 444331246899999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCc--cCCcccc-cccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcCC-
Q 009245 135 GVTLRQVIEESAKAGLA--LPYGPYW-WGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNE- 210 (539)
Q Consensus 135 Gv~l~~l~~~l~~~Gl~--l~~~~~~-~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~~- 210 (539)
|+++.+|+++|.++|+. ++..+.. ...||||++++|+.|.+ +||.++|+|+++++|++||+ +++++.
T Consensus 145 Gv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~---~yG~~~d~v~~l~vVl~dG~------v~~~~~~ 215 (560)
T 1e8g_A 145 GVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT---PYGDHWMMHSGMEVVLANGE------LLRTGMG 215 (560)
T ss_dssp TCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS---TTCBTGGGEEEEEEEETTSC------EEECGGG
T ss_pred CCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc---cceeHHHheeeeEEEeCCCC------EEEecCc
Confidence 99999999999999999 7655433 35799999999888864 58999999999999999999 887764
Q ss_pred --Cc----------------cccccc-cc----------ccccceeeEEeEEEeEEcCcccE--EEEecCcchHHH
Q 009245 211 --SH----------------QDFYAA-KV----------SLGVLGVISQVTLKLEPLFKRSI--AYVQKSDSDLGD 255 (539)
Q Consensus 211 --~~----------------~df~a~-~g----------s~G~lGiIt~vtl~l~p~~~~~~--~~~~~~~~~~~~ 255 (539)
.+ ..++++ .+ +.|+|||||++||++.|.++... ...+.+.+++.+
T Consensus 216 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~ 291 (560)
T 1e8g_A 216 ALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQ 291 (560)
T ss_dssp GSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHH
T ss_pred ccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHH
Confidence 22 333333 33 34899999999999999987532 233334555433
No 21
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=1.5e-26 Score=251.13 Aligned_cols=188 Identities=13% Similarity=0.127 Sum_probs=155.4
Q ss_pred CccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCC-CCcccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCC
Q 009245 58 SVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIP-KLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGV 136 (539)
Q Consensus 58 ~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~-~~~~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv 136 (539)
....|.+|++|+|++||+++|+.|++++++|.++ |+||++. +.+.+...++++|||++||+|+++|+++++|+||||+
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~-g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTI-STGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-cCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 5778999999999999999999999999999999 6777754 4443322469999999999988999999999999999
Q ss_pred CHHHHHHHHHHcCCccCCc--ccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEEcCC---C
Q 009245 137 TLRQVIEESAKAGLALPYG--PYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNE---S 211 (539)
Q Consensus 137 ~l~~l~~~l~~~Gl~l~~~--~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~~~~---~ 211 (539)
++.+|.++|.++|+.++.. |+....||||++++|++|.+ +||.++|+|+++++|++||+ +++++. .
T Consensus 132 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~---~yG~~~d~v~~~evV~~dG~------v~~~~~~~~~ 202 (520)
T 1wvf_A 132 TFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT---PYGEHFMMQCGMEVVLANGD------VYRTGMGGVP 202 (520)
T ss_dssp CHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS---TTCBGGGGEEEEEEECTTSC------EEECGGGGST
T ss_pred CHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc---cccchhhcEeeeEEEcCCCc------EEEeCCCcCC
Confidence 9999999999999998765 44446899999998888865 58999999999999999999 888764 4
Q ss_pred ccc-ccccccccc----------cceeeEEeEEEeEEcCcccE--EEEecCcchHHH
Q 009245 212 HQD-FYAAKVSLG----------VLGVISQVTLKLEPLFKRSI--AYVQKSDSDLGD 255 (539)
Q Consensus 212 ~~d-f~a~~gs~G----------~lGiIt~vtl~l~p~~~~~~--~~~~~~~~~~~~ 255 (539)
++| |++.+++.| +|||||++|||+.|.++... ...+.+.+++.+
T Consensus 203 ~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~ 259 (520)
T 1wvf_A 203 GSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVE 259 (520)
T ss_dssp TCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHH
T ss_pred CchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHH
Confidence 566 666666665 89999999999999988543 233334455443
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.93 E-value=1.6e-26 Score=251.04 Aligned_cols=198 Identities=19% Similarity=0.098 Sum_probs=160.4
Q ss_pred CCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCC----CcEEEEcCCCCCceEeeCCCC
Q 009245 53 MFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQ----EGLLISTKHLNRVLKLDVQAM 128 (539)
Q Consensus 53 nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~----~gv~I~l~~l~~ii~id~~~~ 128 (539)
.|+ ...+.|.+|++|+|++||+++|+.|++++++|.++ ||||++.+.+.+... ++++|||++||+|+++|+ .+
T Consensus 38 d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~-GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~ 114 (571)
T 1f0x_A 38 GFR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQ-AANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GE 114 (571)
T ss_dssp CSS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TT
T ss_pred ccc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEE-CCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CC
Confidence 465 46788999999999999999999999999999999 788988877765422 389999999999989995 57
Q ss_pred EEEEcCCCCHHHHHHHHHHcCCccCCcccc--cccceeeeeccCCCCCCCcCCCCcccc----------------ceeEE
Q 009245 129 TVTVESGVTLRQVIEESAKAGLALPYGPYW--WGLTVGGMLGTGAHGSSLWGRGSSVHD----------------YAVEI 190 (539)
Q Consensus 129 ~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~--~~~tvgG~i~tg~hG~~~~~~~g~~~d----------------~V~~~ 190 (539)
+|+|+||+++.+|.++|.++|+.+|..++. .+.||||++++|+||.... +||.+.| +|+++
T Consensus 115 ~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~~~~~~~~~~~~l~~~~vl~l 193 (571)
T 1f0x_A 115 QVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ-RGPAYTEMSLFARINEDGKLTLVNHLGI 193 (571)
T ss_dssp EEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT-SCSSCCSCEEEEEECTTSCEEEEECSSB
T ss_pred eEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCccccc-CCCchhhhhhhheeccCCceEEEEeeeE
Confidence 999999999999999999999988776643 3579999999999998776 7899999 99999
Q ss_pred EEEccCCCcccceeEEEcC-------------------CCc----------------cc-cccc--ccccccceeeEEeE
Q 009245 191 RIVTPGNPEEEFVNVRVLN-------------------ESH----------------QD-FYAA--KVSLGVLGVISQVT 232 (539)
Q Consensus 191 ~vV~~~G~~~~~~~v~~~~-------------------~~~----------------~d-f~a~--~gs~G~lGiIt~vt 232 (539)
++|+++|++ ++++ .++ +| ++.+ +||+|+||| |++|
T Consensus 194 evVl~dG~i------~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~t 266 (571)
T 1f0x_A 194 DLGETPEQI------LSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVR 266 (571)
T ss_dssp CCCSSHHHH------HHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEE
T ss_pred EEEcCCCcE------EEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEE
Confidence 999999983 3221 111 16 6666 899999999 9999
Q ss_pred EEeEEcCcccEE--EEecCcchHHHHHHHhc
Q 009245 233 LKLEPLFKRSIA--YVQKSDSDLGDQAAIFG 261 (539)
Q Consensus 233 l~l~p~~~~~~~--~~~~~~~~~~~~~~~~~ 261 (539)
|+++|.++.... ..+.+.+++.+.+..+.
T Consensus 267 l~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 267 LDTFEAEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EECEECCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 999999875432 22234445555555544
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.90 E-value=1.5e-23 Score=212.49 Aligned_cols=174 Identities=15% Similarity=0.123 Sum_probs=139.0
Q ss_pred ccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCC
Q 009245 48 TNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQA 127 (539)
Q Consensus 48 ~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~ 127 (539)
+..|++| ++.+.|.+++.|+|++||+++|+.|+++++|+.++ |+||++.. .+.+.++++|||++|+++ .+|.
T Consensus 43 l~~~tt~--~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~-GgGsnl~~--~~~~~~gvvI~l~~~~~I-~~d~-- 114 (322)
T 3tx1_A 43 LSKYTYT--KTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTIL-GNGSNLII--KDGGIRGVILHLDLLQTI-ERNN-- 114 (322)
T ss_dssp GGGGSTT--SCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEE-SCCTTEEE--CTTCEEEEEEECTTCCCE-EEET--
T ss_pred hHHhccC--CcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCccCCCc--CCCCCCeEEEECCCCCcE-EECC--
Confidence 4566667 67889999999999999999999999999999999 66665432 221235899999999996 4764
Q ss_pred CEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEE
Q 009245 128 MTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRV 207 (539)
Q Consensus 128 ~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~ 207 (539)
.+|+|+||++|.+|.+++.++|+.........+.||||++++|++| ++|.++|+|+++++|+++|+ +++
T Consensus 115 ~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~------i~~ 183 (322)
T 3tx1_A 115 TQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGGEISDVLEAATVLTQTGE------LKK 183 (322)
T ss_dssp TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EEE
T ss_pred CEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----cccchHhhEEEEEEEcCCCC------EEE
Confidence 5999999999999999999999974444444457999999999998 34799999999999999999 888
Q ss_pred cCCCcccccccccccc-cceeeEEeEEEeEEcCc
Q 009245 208 LNESHQDFYAAKVSLG-VLGVISQVTLKLEPLFK 240 (539)
Q Consensus 208 ~~~~~~df~a~~gs~G-~lGiIt~vtl~l~p~~~ 240 (539)
++.++..|.+....+| ..||||++||++.|.++
T Consensus 184 ~~~~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 184 LKRSELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp EEGGGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred echHHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 8764333444434444 36899999999999864
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.88 E-value=1.3e-22 Score=206.82 Aligned_cols=168 Identities=16% Similarity=0.135 Sum_probs=133.1
Q ss_pred cccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCCC
Q 009245 49 NSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAM 128 (539)
Q Consensus 49 ~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~~ 128 (539)
..|..| .+.+.|.++++|+|++||+++++.|+++++++.++ ||||++.+... ..++++|||++||++ ++|. +
T Consensus 38 ~~~~t~--~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~-GgGtnl~~~~~--~~~gvvI~l~~m~~i-~id~--~ 109 (326)
T 1hsk_A 38 KRYTYT--KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYL-GNGSNIIIREG--GIRGIVISLLSLDHI-EVSD--D 109 (326)
T ss_dssp GGTCTT--SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEE-SSCSSEEECTT--CEEEEEEECTTCCCE-EEET--T
T ss_pred HHhccC--CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEE-CCCCccccCCC--CCCeEEEEeCCCCce-EEcC--C
Confidence 445555 46788999999999999999999999999999999 67776443222 124899999999997 8874 6
Q ss_pred EEEEcCCCCHHHHHHHHHHcCCccC-CcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEEE
Q 009245 129 TVTVESGVTLRQVIEESAKAGLALP-YGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRV 207 (539)
Q Consensus 129 ~vtv~aGv~l~~l~~~l~~~Gl~l~-~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~~ 207 (539)
+++|+||+++.+|.+++.++|+... ..+. .+.||||++++|++| ++|.++|+|.++++|+++|+ +++
T Consensus 110 ~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~-~PgtvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~------i~~ 177 (326)
T 1hsk_A 110 AIIAGSGAAIIDVSRVARDYALTGLEFACG-IPGSIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGS------LIK 177 (326)
T ss_dssp EEEEETTSBHHHHHHHHHHTTEESCGGGTT-CCSBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EEE
T ss_pred EEEEeCCCcHHHHHHHHHHCCCccccccCC-CcchhhHHHhccccc-----CchhhhhhEEEEEEEeCCCC------EEE
Confidence 9999999999999999999999321 2222 234999999999988 23489999999999999998 888
Q ss_pred cCCCcccccccc---cccccceeeEEeEEEeEEc
Q 009245 208 LNESHQDFYAAK---VSLGVLGVISQVTLKLEPL 238 (539)
Q Consensus 208 ~~~~~~df~a~~---gs~G~lGiIt~vtl~l~p~ 238 (539)
++.++..|.+.. .+.| ||||++||++.|.
T Consensus 178 ~~~~~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 178 LTTKELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp EETTTTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred EChHHcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 776422222222 2445 9999999999998
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.87 E-value=1.3e-21 Score=199.77 Aligned_cols=173 Identities=13% Similarity=0.101 Sum_probs=139.0
Q ss_pred cccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeCCC-
Q 009245 49 NSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQA- 127 (539)
Q Consensus 49 ~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~~~- 127 (539)
..|++| ++.+.|+.++.|+|++||++++++|+++++|+.++| |||.. +..+ +.+|++|+++ |+++..+|.++
T Consensus 4 ~~~tt~--~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlG-gGSnl--l~~d-~~~GvVI~l~-~~~i~~i~~~~~ 76 (340)
T 1uxy_A 4 KPWNTF--GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILG-EGSNV--LFLE-DYRGTVIINR-IKGIEIHDEPDA 76 (340)
T ss_dssp GGGSTT--CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEES-SCTTE--EECS-CEEEEEEEEC-CCCEEEEECSSE
T ss_pred cccccC--CCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEEC-CCcCC--cccC-CCCeEEEEcc-CCCcEEEecCCC
Confidence 556667 778889999999999999999999999999999995 44432 1112 2358999996 99977777776
Q ss_pred CEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEcc-CCCcccceeEE
Q 009245 128 MTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTP-GNPEEEFVNVR 206 (539)
Q Consensus 128 ~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~-~G~~~~~~~v~ 206 (539)
.+|+|+||++|.+|.+++.++||......+..+.||||++.+|+++ +++.++|.|.++++|++ +|+ ++
T Consensus 77 ~~v~vgAG~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~NaGa-----yG~ei~d~v~~v~vv~~~~G~------v~ 145 (340)
T 1uxy_A 77 WYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGA-----YGVELQRVCAYVDSVELATGK------QV 145 (340)
T ss_dssp EEEEEETTSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTE------EE
T ss_pred eEEEEecCCCHHHHHHHHHHCCCCccccccCCccchhHHHHhcccc-----chhhHHhheeEEEEEECCCCc------EE
Confidence 6999999999999999999999975554544557999999999877 34479999999999996 998 88
Q ss_pred EcCCCcccccccccc-----cccceeeEEeEEEeEEcCc
Q 009245 207 VLNESHQDFYAAKVS-----LGVLGVISQVTLKLEPLFK 240 (539)
Q Consensus 207 ~~~~~~~df~a~~gs-----~G~lGiIt~vtl~l~p~~~ 240 (539)
+++.++. +++.+.+ .|.+||||++||++.|.+.
T Consensus 146 ~~~~~d~-~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 146 RLTAKEC-RFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp EEETGGG-TCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred EEeHHHh-ccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 8876433 4444433 2469999999999999864
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.87 E-value=5e-22 Score=203.37 Aligned_cols=175 Identities=14% Similarity=0.114 Sum_probs=139.4
Q ss_pred ccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCCCCCceEeeC--
Q 009245 48 TNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDV-- 125 (539)
Q Consensus 48 ~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~l~~ii~id~-- 125 (539)
+..|++| ++.+.|..++.|+|++||+++|++|+++++|+.++ |+||.. +..+. .+|++|+++ |+++ +++.
T Consensus 19 L~~~tt~--~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vl-GgGSNl--l~~d~-~~GvVI~l~-~~~i-~v~~~~ 90 (357)
T 3i99_A 19 LKPYHTF--GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLII-GKGSNM--LFTCH-YTGMIVVNR-LNGI-EHQQDD 90 (357)
T ss_dssp SGGGSTT--CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEE-SSCTTE--EECSC-EEEEEEEEC-CCCE-EEEECS
T ss_pred chhhccC--CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEE-CCCcCc--ccCCC-CCeEEEEcC-CCce-EEeccC
Confidence 4667778 78899999999999999999999999999999999 455532 11221 358999998 9885 6653
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEcc-CCCccccee
Q 009245 126 QAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTP-GNPEEEFVN 204 (539)
Q Consensus 126 ~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~-~G~~~~~~~ 204 (539)
+..+|+|+||++|.+|.+++.++||......+..+.||||++++|++. +++.++|+|+++++|++ +|+
T Consensus 91 ~~~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~NaGa-----YG~e~~d~v~~vevv~~~~G~------ 159 (357)
T 3i99_A 91 DYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGA-----YGVEFKDVCDYVEYLCLETGT------ 159 (357)
T ss_dssp SEEEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTE------
T ss_pred CceEEEEeCCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhchhh-----hhhhHHhhEeEEEEEECCCCc------
Confidence 456899999999999999999999985554444557999999999864 23459999999999998 898
Q ss_pred EEEcCCCccccccccccc----ccceeeEEeEEEeEEcCcc
Q 009245 205 VRVLNESHQDFYAAKVSL----GVLGVISQVTLKLEPLFKR 241 (539)
Q Consensus 205 v~~~~~~~~df~a~~gs~----G~lGiIt~vtl~l~p~~~~ 241 (539)
+++++.++..|.+..+.+ |.+||||++||++.|.++.
T Consensus 160 i~~~~~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~~ 200 (357)
T 3i99_A 160 VKRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQP 200 (357)
T ss_dssp EEEEETGGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred EEEEeHHHcCcccccccCCCccCCCEEEEEEEEEEEeCCcc
Confidence 888876544344443323 5899999999999998653
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.79 E-value=1.2e-19 Score=178.94 Aligned_cols=161 Identities=19% Similarity=0.180 Sum_probs=124.4
Q ss_pred ccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCC-cEEEEcCCCCCceEeeCC
Q 009245 48 TNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQE-GLLISTKHLNRVLKLDVQ 126 (539)
Q Consensus 48 ~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~-gv~I~l~~l~~ii~id~~ 126 (539)
+..|++| ++.+.|. ++.|+|++||+++| ++|+.++ |+||+. +..+.+.+ +++|++++|+++ ++|.
T Consensus 11 l~~~tt~--~igg~a~-vv~p~s~edv~~~v------~ipv~v~-GgGsnl--l~~d~~~~~GvVI~l~~~~~I-~vd~- 76 (268)
T 2gqt_A 11 LKDYTTL--GVGGPAE-LWTVETREELKRAT------EAPYRVL-GNGSNL--LVLDEGVPERVIRLAGEFQTY-DLKG- 76 (268)
T ss_dssp GGGGSSS--CCCCEEE-EEEECSHHHHHHHT------TSCEEEC-SSSSSE--EECTTCCSSEEEEECGGGGCB-CTTS-
T ss_pred hHHhccc--ccCcceE-EEEeCCHHHHHHHh------CCCeEEc-CCCcCc--eecCCCcCCeEEEEcCCCCCc-EEcC-
Confidence 3566777 6777788 99999999999999 7899999 555532 22222233 899999999985 5652
Q ss_pred CCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcccceeEE
Q 009245 127 AMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVR 206 (539)
Q Consensus 127 ~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~~~~~v~ 206 (539)
+|+||++|.+|.+++.++||......+..+.||||++++|+++ +++.++|+|+++++| ++|+ ++
T Consensus 77 ----~v~aG~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~NaGa-----yG~e~~d~v~~v~vv-~~G~------v~ 140 (268)
T 2gqt_A 77 ----WVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGT-----RFGEMADALEAVEVF-HDGA------FH 140 (268)
T ss_dssp ----EEETTSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTTCEE-----TTEEGGGGEEEEEEE-ETTE------EE
T ss_pred ----EEECCCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhcccc-----CchhHHhheeEEEEE-CCCc------EE
Confidence 9999999999999999999975555554557999999999876 233799999999999 9998 88
Q ss_pred EcCCCccccccccccc-ccceeeEEeEEEeEEcC
Q 009245 207 VLNESHQDFYAAKVSL-GVLGVISQVTLKLEPLF 239 (539)
Q Consensus 207 ~~~~~~~df~a~~gs~-G~lGiIt~vtl~l~p~~ 239 (539)
+++.++. +++.+.+. ..-||||++||++.|.+
T Consensus 141 ~~~~~~l-~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 141 VYCPEEL-GFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp EECGGGS-CCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred EEchHHc-ccccCCCCcCCCceEEEEEEEEEeCC
Confidence 8876432 44444332 21249999999999984
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.74 E-value=4.2e-18 Score=163.26 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=99.8
Q ss_pred eEeeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccccceeEEEEEccCCCcc
Q 009245 121 LKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEE 200 (539)
Q Consensus 121 i~id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~~~~vV~~~G~~~ 200 (539)
+++|+++++|+|+||+++.+|+++|.++|+.++..|+....||||++++|+|| . +||.. |+|+++++|+++|+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~-~yG~~-D~V~~vevV~~dG~-- 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---Q-TFFFP-AEVLGLTFRTPKGR-- 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---B-SSCGG-GGEEEEEEECTTSC--
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---c-cCCCc-cEEEEEEEEeCCCC--
Confidence 47899999999999999999999999999999998874444999999999999 2 58888 99999999999998
Q ss_pred cceeEEEcCCC------ccc-ccccccccccceeeEEeEEEeEEcCcccEEE
Q 009245 201 EFVNVRVLNES------HQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSIAY 245 (539)
Q Consensus 201 ~~~~v~~~~~~------~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~ 245 (539)
+++++.+ ++| |++.+|+.|+|||||++|||+.|.++.....
T Consensus 74 ----i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~ 121 (219)
T 2yvs_A 74 ----RVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLR 121 (219)
T ss_dssp ----EEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEE
T ss_pred ----EEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEE
Confidence 7777642 257 8888999999999999999999998765443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.28 E-value=8.3e-07 Score=88.37 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=95.0
Q ss_pred ccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCC---CCCceEeeCCCCEEEEcCCCCH
Q 009245 62 AANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKH---LNRVLKLDVQAMTVTVESGVTL 138 (539)
Q Consensus 62 p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~---l~~ii~id~~~~~vtv~aGv~l 138 (539)
+-.++.|+|.+|+.++++.. +.+.++++||++....+-......+++||+++ |+. ++. +++.++++||+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~-i~~--~~~~l~iGA~~tl 78 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRG-IRE--EGSTVVIGAMTVE 78 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCC-EEE--ETTEEEEETTCBH
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcc-eEe--cCCEEEEccCCcH
Confidence 44689999999999999864 24678895444421100000023479999985 555 343 4457999999999
Q ss_pred HHHHHH-HHHcCCcc-----CCcccc---cccceeeeeccCCCCCCCcCCCCcccccee----EEEEEccCCCcccceeE
Q 009245 139 RQVIEE-SAKAGLAL-----PYGPYW---WGLTVGGMLGTGAHGSSLWGRGSSVHDYAV----EIRIVTPGNPEEEFVNV 205 (539)
Q Consensus 139 ~~l~~~-l~~~Gl~l-----~~~~~~---~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~----~~~vV~~~G~~~~~~~v 205 (539)
.+|.+. +.++++.. ....+. +..||||.+.++...+ .+...+. .+++..++|+
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~~-------D~~~~l~Al~A~v~~~~~~G~------- 144 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGN-------DHPALSIAVEAHFVLEGPNGR------- 144 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTC-------SHHHHHHHTTCEEEEEETTEE-------
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCCcH-------HHHHHHHHcCcEEEEEcCCce-------
Confidence 999963 44444321 112222 2479999999985421 2222222 5788888874
Q ss_pred EEcCCCcccccccccccccceeeEEeEEEeEEc
Q 009245 206 RVLNESHQDFYAAKVSLGVLGVISQVTLKLEPL 238 (539)
Q Consensus 206 ~~~~~~~~df~a~~gs~G~lGiIt~vtl~l~p~ 238 (539)
+++..++-.+.+....+.--.||++++|...+.
T Consensus 145 r~i~~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 145 RTVPADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEEESTTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEEHHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 444432211223333444435899999987664
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.63 E-value=2.5e-05 Score=82.62 Aligned_cols=152 Identities=13% Similarity=0.055 Sum_probs=93.8
Q ss_pred cEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCCCcEEEEcCC---CCCceEeeCCCCEEEEcCCCCHH
Q 009245 63 ANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKH---LNRVLKLDVQAMTVTVESGVTLR 139 (539)
Q Consensus 63 ~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~~gv~I~l~~---l~~ii~id~~~~~vtv~aGv~l~ 139 (539)
..++.|+|.+|+.++++... +.++++||.+....+-......+++||+++ |++ ++.+ ++.++++||+++.
T Consensus 178 ~~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~-I~~~--~~~l~IGA~vtl~ 250 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAHP----EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQ-IRET--PDGYGIGAGVTIA 250 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSC-EEEE--TTEEEEETTCBHH
T ss_pred cEEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCc-EEEc--CCEEEEccCCcHH
Confidence 45789999999999987632 467884444322110000113478999988 455 3443 4579999999999
Q ss_pred HHHHHHHHcCCcc-----CCcccc---cccceeeeeccCCCCCCCcCCCCcccccee----EEEEEccCCCcccceeEEE
Q 009245 140 QVIEESAKAGLAL-----PYGPYW---WGLTVGGMLGTGAHGSSLWGRGSSVHDYAV----EIRIVTPGNPEEEFVNVRV 207 (539)
Q Consensus 140 ~l~~~l~~~Gl~l-----~~~~~~---~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~----~~~vV~~~G~~~~~~~v~~ 207 (539)
+|.+.+ +..+.. ....+. +..||||.|+++.+++ .+...+. .+++..++|+ ++
T Consensus 251 ~l~~~l-~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~s-------D~~~~L~ALdA~v~l~~~~G~-------R~ 315 (462)
T 2w3s_A 251 ALRAFA-EGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIG-------DGPPALIAMGASLTLRRGQER-------RR 315 (462)
T ss_dssp HHHHHH-TTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTC-------SHHHHHHHTTCEEEEEBTTBC-------CC
T ss_pred HHHHHH-HHHhHHHHHHHHHhCChhheeeEEcccccccCCCcc-------hHHHHHHHcCCEEEEEeCCce-------EE
Confidence 999884 333321 111221 2369999999987653 4555666 7788888874 33
Q ss_pred cCCCcccccc--cccccccceeeEEeEEEeEEc
Q 009245 208 LNESHQDFYA--AKVSLGVLGVISQVTLKLEPL 238 (539)
Q Consensus 208 ~~~~~~df~a--~~gs~G~lGiIt~vtl~l~p~ 238 (539)
+.. .||.. ....+.-=-||++++|...+.
T Consensus 316 vp~--~dF~~g~~~t~L~~~Eii~~i~iP~~~~ 346 (462)
T 2w3s_A 316 MPL--EDFFLEYRKQDRRPGEFVESVTLPKSAP 346 (462)
T ss_dssp CBG--GGGEEETTEESCCTTCEEEEEEEESCCS
T ss_pred EEH--HHhhcccccccCCCCcEEEEEEEecCCC
Confidence 332 34322 222333335899999977553
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.45 E-value=9.2e-05 Score=73.54 Aligned_cols=154 Identities=12% Similarity=0.181 Sum_probs=91.7
Q ss_pred ccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-cccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCCHHH
Q 009245 62 AANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKL-VCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQ 140 (539)
Q Consensus 62 p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~-~~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~~ 140 (539)
+-.++.|+|.+|+.++++.. +.+.+++ +||++.... -......+++||++++...-.|..+++.++++|++++.+
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPL-AGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEE-ECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 44689999999999999754 2357888 455432110 000013379999987543323444556899999999999
Q ss_pred HHH--HHHHcCCccC----Ccccc---cccceeeeeccCCCCCCCcCCCCcccccee-------EEEEEccCCCccccee
Q 009245 141 VIE--ESAKAGLALP----YGPYW---WGLTVGGMLGTGAHGSSLWGRGSSVHDYAV-------EIRIVTPGNPEEEFVN 204 (539)
Q Consensus 141 l~~--~l~~~Gl~l~----~~~~~---~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~-------~~~vV~~~G~~~~~~~ 204 (539)
|.+ .+.++--.+. ...+. +..||||.++++.. .+|.+. .+++..++|+
T Consensus 81 l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p----------~sD~~~~L~Al~A~v~l~~~~G~------ 144 (288)
T 1n62_C 81 LIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDP----------GNDMPALMQCLGAAYELTGPEGA------ 144 (288)
T ss_dssp HHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCT----------TCSHHHHHHHHTCEEEEEETTEE------
T ss_pred HhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCCC----------chHHHHHHHHhCcEEEEEeCCcc------
Confidence 995 4444211111 11221 23699999998732 344443 6667777774
Q ss_pred EEEcCCCccccccc--ccccccceeeEEeEEEeEEc
Q 009245 205 VRVLNESHQDFYAA--KVSLGVLGVISQVTLKLEPL 238 (539)
Q Consensus 205 v~~~~~~~~df~a~--~gs~G~lGiIt~vtl~l~p~ 238 (539)
+++.. .||... ...+.---|||+++|...+.
T Consensus 145 -r~v~~--~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 145 -RIVAA--RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp -EEEEH--HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred -EEEEH--HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 44432 243322 23444445899999977653
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.90 E-value=0.0017 Score=64.91 Aligned_cols=159 Identities=14% Similarity=0.153 Sum_probs=92.6
Q ss_pred ccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCc-ccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCC
Q 009245 59 VCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLV-CPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVT 137 (539)
Q Consensus 59 ~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~-~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~ 137 (539)
.+.+..+++|+|.+|+.++++.. . ..+++ +||.+..... ........+||++++...-.|..+++.++++|+++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~~---~-~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt 81 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQH---P-EAKLV-VGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACA 81 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHC---T-TCEEC-SSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCB
T ss_pred cCCCeEEEccCCHHHHHHHHHhC---C-CCEEE-ECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCc
Confidence 34567899999999999988653 1 35677 4444321100 01122368999998653333444567899999999
Q ss_pred HHHHHHHHHHc-------------CC--ccCCcccc---cccceeeeeccCCCCCCCcCCCCcccccee----EEEEEcc
Q 009245 138 LRQVIEESAKA-------------GL--ALPYGPYW---WGLTVGGMLGTGAHGSSLWGRGSSVHDYAV----EIRIVTP 195 (539)
Q Consensus 138 l~~l~~~l~~~-------------Gl--~l~~~~~~---~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~----~~~vV~~ 195 (539)
+.++.+.+.++ .+ ++....+. +..||||.++++...+- +.-.++ .+++..+
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~sD-------~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISD-------LNPVFMASGTKLTIVSR 154 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTTCS-------SHHHHHHHTCEEEEEET
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCchH-------HHHHHHHcCCEEEEEcC
Confidence 99999886532 11 11112221 24699999998765432 222222 4667777
Q ss_pred CCCcccceeEEEcCCCcccccc-c-ccccccceeeEEeEEEeEE
Q 009245 196 GNPEEEFVNVRVLNESHQDFYA-A-KVSLGVLGVISQVTLKLEP 237 (539)
Q Consensus 196 ~G~~~~~~~v~~~~~~~~df~a-~-~gs~G~lGiIt~vtl~l~p 237 (539)
+|+ +++.-+ .||.. . ...+.-=-|||++.+...+
T Consensus 155 ~G~-------R~vp~~-~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 155 GTR-------RTVPMD-HTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp TEE-------EEEECC-GGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred CCc-------EEEEee-hHhhcCcccccCCCCcEEEEEEecCCC
Confidence 774 333322 24332 1 1233333489999986543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.79 E-value=0.0011 Score=65.67 Aligned_cols=152 Identities=20% Similarity=0.199 Sum_probs=90.5
Q ss_pred ccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCc-ccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCCHHH
Q 009245 62 AANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLV-CPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQ 140 (539)
Q Consensus 62 p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~-~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~~ 140 (539)
+-.++.|+|.+|+.++++. +-..+++ .||++..... ........+||++++...-.|..+++.++++|++++.+
T Consensus 5 ~f~y~~P~sl~ea~~ll~~----~~~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD----DPDARII-AGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH----CTTCEEE-SSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CceEECCCCHHHHHHHHhh----CCCCEEE-eCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHH
Confidence 4568999999999999874 2245778 4555421110 00012368999998653333444556899999999999
Q ss_pred HHH--HHHHcCCccC----Cccc--c-cccceeeeeccCCCCCCCcCCCCcccccee-------EEEEEccCCCccccee
Q 009245 141 VIE--ESAKAGLALP----YGPY--W-WGLTVGGMLGTGAHGSSLWGRGSSVHDYAV-------EIRIVTPGNPEEEFVN 204 (539)
Q Consensus 141 l~~--~l~~~Gl~l~----~~~~--~-~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~-------~~~vV~~~G~~~~~~~ 204 (539)
|.+ .+.++--.+. ..++ + +..|+||.|+++. ..+|... .+++..++|+
T Consensus 80 l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~----------p~sD~~~~L~Al~A~v~l~~~~g~------ 143 (288)
T 1t3q_C 80 NKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD----------AGAEMPFLMATLGATMYIASSAGV------ 143 (288)
T ss_dssp HHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC----------TTCHHHHHHHHTTCEEEEEETTEE------
T ss_pred HhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC----------CcHHHHHHHHHcCcEEEEEcCCce------
Confidence 997 4443221111 1111 1 3359999998542 2455555 6777777774
Q ss_pred EEEcCCCccccccc--ccccccceeeEEeEEEeEE
Q 009245 205 VRVLNESHQDFYAA--KVSLGVLGVISQVTLKLEP 237 (539)
Q Consensus 205 v~~~~~~~~df~a~--~gs~G~lGiIt~vtl~l~p 237 (539)
+++.- .||... ...+.---|||++.|...+
T Consensus 144 -R~vp~--~dF~~g~~~t~L~~~Eil~~I~iP~~~ 175 (288)
T 1t3q_C 144 -RSVSA--TDFMKGHYFTDLEAGEVLVRVEIPIPA 175 (288)
T ss_dssp -EEEEH--HHHEEETTEESCCTTCEEEEEEEECCS
T ss_pred -EEEEH--HHHhcCcccccCCCCCEEEEEEecCCC
Confidence 44432 343322 1234444589999987543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.68 E-value=0.0061 Score=60.54 Aligned_cols=108 Identities=16% Similarity=0.072 Sum_probs=64.8
Q ss_pred ccEEEeCCCHHHHHHHHHHHHHcCC-CeEEEeCCCCCCCCCc-ccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCCHH
Q 009245 62 AANVAYPASEQELISIVAAAAMTKT-RIKVATRFSHSIPKLV-CPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLR 139 (539)
Q Consensus 62 p~~v~~P~s~~ev~~~v~~a~~~~~-~v~v~~ggghs~~~~~-~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~ 139 (539)
+-.+++|+|.+|+.++++.. +- ..+++ .||.+..... ........+||++++...-.|..+++.++++|++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~---~~~~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY---KDVPPAII-AGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT---TTSCCEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHHhC---CCCCeEEE-ECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 34689999999999887653 22 35677 4554321100 0001236899999875443455566799999999999
Q ss_pred HHHHH--HHHcC--C--ccCCccc--c-cccceeeeeccCCCC
Q 009245 140 QVIEE--SAKAG--L--ALPYGPY--W-WGLTVGGMLGTGAHG 173 (539)
Q Consensus 140 ~l~~~--l~~~G--l--~l~~~~~--~-~~~tvgG~i~tg~hG 173 (539)
++.+. +.++= + ++....+ + +..||||.|+++.+-
T Consensus 79 ~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~ 121 (296)
T 3hrd_C 79 QIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSVA 121 (296)
T ss_dssp HHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTT
T ss_pred HHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCCc
Confidence 99742 22110 0 1111111 1 246999999975543
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=92.38 E-value=0.084 Score=52.90 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=60.3
Q ss_pred cEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-cccCCCCcEEEEcCCCCCceEeeCC-CCEEEEcCCCCHHH
Q 009245 63 ANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKL-VCPAGQEGLLISTKHLNRVLKLDVQ-AMTVTVESGVTLRQ 140 (539)
Q Consensus 63 ~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~-~~~~~~~gv~I~l~~l~~ii~id~~-~~~vtv~aGv~l~~ 140 (539)
-.++.|+|.+|+.++++. . .-+++ .||.+.... -........+||++++...-.|..+ ++.++++|++++.|
T Consensus 7 f~y~~P~sl~ea~~ll~~---~--~a~~l-AGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~ 80 (324)
T 1rm6_B 7 FRTHRPATLADAVNALAA---E--ATLPL-GAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEA 80 (324)
T ss_dssp CEEECCSSHHHHHHHTTS---T--TEEEE-SSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHH
T ss_pred eEEEccCCHHHHHHHHhC---C--CCEEE-ECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHH
Confidence 358999999999998862 2 35677 455432110 0000123789999887443334433 34799999999999
Q ss_pred HHHH--HHHcC--C--ccCCc--ccc-cccceeeeeccC
Q 009245 141 VIEE--SAKAG--L--ALPYG--PYW-WGLTVGGMLGTG 170 (539)
Q Consensus 141 l~~~--l~~~G--l--~l~~~--~~~-~~~tvgG~i~tg 170 (539)
|.+. +.++- + ++... +.+ +..||||.|++.
T Consensus 81 l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~~ 119 (324)
T 1rm6_B 81 IAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQD 119 (324)
T ss_dssp HHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCC
T ss_pred HHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecccc
Confidence 9874 22210 0 01111 111 235999999753
No 36
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=89.85 E-value=0.31 Score=52.68 Aligned_cols=100 Identities=10% Similarity=0.079 Sum_probs=63.1
Q ss_pred eeeEEEEechhHHHHHHHHHHHHHhCccccccceeeeeEEEEEecCCCCCCCCCCCeEEEEEEEeccCCCCCccccHHHH
Q 009245 395 HQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVL 474 (539)
Q Consensus 395 ~~~E~~iP~~~~~~~l~~v~~~~~~~~~~~~~~~~~~pi~~Rfv~~d~~~Ls~~~d~~~i~i~~~~~~~~~~~~~~~~~~ 474 (539)
...|++||.+++.++ +++++.+++.... . +-|... +...+.+++..-. + . .++++.
T Consensus 456 ~~~Dvavp~~~l~~~-~~~~~~l~~~~~~-~---------~~~GH~-------g~g~~H~~~~~~~--~--~--~~~~i~ 511 (571)
T 1f0x_A 456 LALDIALRRNDTEWY-EHLPPEIDSQLVH-K---------LYYGHF-------MCYVFHQDYIVKK--G--V--DVHALK 511 (571)
T ss_dssp EEEEEECCTTCSCCS-CCCCHHHHTTEEE-E---------EEEEET-------TTTEEEEEEEEET--T--C--CHHHHH
T ss_pred eEEEEEecHHHhHHH-HHHHHHHHhhCcc-c---------eeEEEE-------cCCceEEeeecCC--c--h--hHHHHH
Confidence 558999999999999 9999988763311 0 011111 1234555555422 1 1 266788
Q ss_pred HHHHHHHHhhcCCccccccCCCccchhHHHhC-CCHHHHHHHHHhcCCCCCCcc
Q 009245 475 EEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKY-KNAGEFLKVKQKFDPLGLFSS 527 (539)
Q Consensus 475 ~~ie~~~~~~~gGRPHWgK~~~~~~~~l~~~Y-P~~~~F~~~r~~~DP~g~F~n 527 (539)
+++-++ +.++||..- + .|..... | +... +.++|+.+||+|+|..
T Consensus 512 ~~~~~~-v~~~GGsis-a-EHGvG~~-----~~~~~~-m~~iK~~~DP~~ilNP 556 (571)
T 1f0x_A 512 EQMLEL-LQQRGAQYP-A-EHNVGHL-----YKAPET-LQKFYRENDPTNSMNP 556 (571)
T ss_dssp HHHHHH-HHHTTCBSC-S-SSCCTTT-----SCCCHH-HHHHHHHHCTTCCBST
T ss_pred HHHHHH-HHHcCCeEE-e-eccCCcc-----cCCHHH-HHHHHHHhCCCCCCCC
Confidence 888887 789999543 1 2222221 4 2333 9999999999999865
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=89.05 E-value=0.41 Score=56.84 Aligned_cols=109 Identities=13% Similarity=0.059 Sum_probs=67.2
Q ss_pred CccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCc-ccCCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCCHH
Q 009245 61 KAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLV-CPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLR 139 (539)
Q Consensus 61 ~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~-~~~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~ 139 (539)
.+..+++|+|.+|+.++++.. -.-+++ .||.+..... ........+||++++...-.|..+++.++++|++++.
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lv-aGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLV-VGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEEC-SSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEE-EeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 345789999999999987653 124566 4444321100 0001236899999875433444456789999999999
Q ss_pred HHHHHHHHcC-------------C--ccCCccc--c-cccceeeeeccCCCCC
Q 009245 140 QVIEESAKAG-------------L--ALPYGPY--W-WGLTVGGMLGTGAHGS 174 (539)
Q Consensus 140 ~l~~~l~~~G-------------l--~l~~~~~--~-~~~tvgG~i~tg~hG~ 174 (539)
+|.+.+.+.= | ++....+ + +..||||.|+++.+-+
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~s 359 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPIS 359 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCch
Confidence 9998764320 0 1111111 1 2369999999877654
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=85.11 E-value=3 Score=44.37 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=59.8
Q ss_pred eEEEEec--hhHHHHHHHHHHHHHhCccccccceeeeeEEEEEecCCCCCCCCCCCeEEEEEE-EeccCCCCCccccHHH
Q 009245 397 TTFSVAL--SVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIM-YYRSKDPMAPRLYEDV 473 (539)
Q Consensus 397 ~E~~iP~--~~~~~~l~~v~~~~~~~~~~~~~~~~~~pi~~Rfv~~d~~~Ls~~~d~~~i~i~-~~~~~~~~~~~~~~~~ 473 (539)
....+|. +++.+++++++++.++..-. ..+ |... +...+.+.+. .+...++......+++
T Consensus 394 ~d~~vp~~~~~l~~~~~~~~~~~~~~~~~-------~~~---~gh~-------gdGnlH~~i~~~~~~~~~~~~~~~~~~ 456 (520)
T 1wvf_A 394 FAPVSEARGSECKKQAAMAKRVLHKYGLD-------YVA---EFIV-------APRDMHHVIDVLYDRTNPEETKRADAC 456 (520)
T ss_dssp ECBEEESCHHHHHHHHHHHHHHHHHTTCC-------CCE---EEEE-------CSSEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred eccccCCCHHHHHHHHHHHHHHHHHcCCC-------eeE---eecc-------cCcceeeeeccccCCCCHHHHHHHHHH
Confidence 4567888 99999999999999864321 000 0000 1123444432 2322221111123445
Q ss_pred HHHHHHHHHhhcCCccccccCCC--ccchhHHHhC-C-CHHHHHHHHHhcCCCCCCcc
Q 009245 474 LEEIEQLAVFKYGGLPHWGKNRN--LVFDGVIKKY-K-NAGEFLKVKQKFDPLGLFSS 527 (539)
Q Consensus 474 ~~~ie~~~~~~~gGRPHWgK~~~--~~~~~l~~~Y-P-~~~~F~~~r~~~DP~g~F~n 527 (539)
++++-+. ..+||. |.... .-.+.+.+.| | .++-+.++|+.|||+|+|..
T Consensus 457 ~~~~~~~-~~ehG~----G~~k~~~~~~~~~~~~~g~~~~~lmr~IK~a~DP~~IlNP 509 (520)
T 1wvf_A 457 FNELLDE-FEKEGY----AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAP 509 (520)
T ss_dssp HHHHHHH-HHHTTC----CBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCT
T ss_pred HHHHHHH-HHHcCC----CccccChhHhhhhhhhcCHHHHHHHHHHHHHcCCCCCCCC
Confidence 5555554 456663 33321 1122335666 3 47888999999999999864
No 39
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=70.70 E-value=1.6 Score=51.89 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=52.0
Q ss_pred cEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCccc--CCCCcEEEEcCCCCCceEeeCCCCEEEEcCCCCHHH
Q 009245 63 ANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCP--AGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQ 140 (539)
Q Consensus 63 ~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~--~~~~gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~~ 140 (539)
...+.|.|.+|+.++.+.-- +. +++. |++-.++-.. ...-.++|++.+....-.+..++..++++|++++.+
T Consensus 241 ~~w~~P~tl~el~~l~~~~p--~a--~lva--GnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~ 314 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHP--SA--PLVI--GNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQ 314 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCT--TS--CBCS--SCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHH
T ss_pred ceEecCCCHHHHHHHHHHCC--CC--eEEE--ecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHH
Confidence 35789999999999865422 22 3442 2321122111 112368999887655545666777899999999999
Q ss_pred HHHHHHH
Q 009245 141 VIEESAK 147 (539)
Q Consensus 141 l~~~l~~ 147 (539)
+.+.|.+
T Consensus 315 ~~~~l~~ 321 (1335)
T 3zyv_A 315 VKNVLSD 321 (1335)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998865
No 40
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=67.42 E-value=3 Score=34.43 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=27.4
Q ss_pred hHHHhCCCHHHHHHHHHhcCCCCCCcchhhhhhcC
Q 009245 501 GVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLG 535 (539)
Q Consensus 501 ~l~~~YP~~~~F~~~r~~~DP~g~F~n~~~~~llg 535 (539)
.+.+.+| +.|.++.++|||+|.+.+.|.+.+-.
T Consensus 74 ~l~~n~P--~~W~~L~~KyDP~g~y~~ky~~~~~~ 106 (109)
T 2gvs_A 74 HLINHKP--DVWAQLKAKYDPDGTYSKKYEDREKE 106 (109)
T ss_dssp HHHHHCH--HHHHHHHHHHCTTCTTTHHHHTTTCC
T ss_pred HHHHcCh--HHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 3566677 89999999999999999999886543
No 41
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=63.85 E-value=3 Score=34.62 Aligned_cols=31 Identities=23% Similarity=0.447 Sum_probs=26.6
Q ss_pred hHHHhCCCHHHHHHHHHhcCCCCCCcchhhhhh
Q 009245 501 GVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQM 533 (539)
Q Consensus 501 ~l~~~YP~~~~F~~~r~~~DP~g~F~n~~~~~l 533 (539)
.+.+.+| +.|.++.++|||+|.+.+.|.+.+
T Consensus 72 ~l~~n~P--~~W~~L~~KyDP~g~y~~~y~~~~ 102 (112)
T 1k19_A 72 HLIKNEI--EIWRELTAKYDPTGNWRKKYEDRA 102 (112)
T ss_dssp HHHHHHS--CHHHHHHHSSTTTCSSHHHHHHHH
T ss_pred HHHHcCh--HHHHHHHHHHCCCchHHHHHHHHH
Confidence 3566778 689999999999999999998865
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=35.42 E-value=68 Score=26.82 Aligned_cols=44 Identities=14% Similarity=-0.013 Sum_probs=36.1
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCC
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHS 97 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs 97 (539)
..| ...+.+..|+...|++|+.++.+.|++.|++..++--.|++
T Consensus 41 ~~W--~~~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 41 RKW--LDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HHT--GGGCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHH--HHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 457 44567889999999999999999999999998777456664
No 43
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=29.17 E-value=49 Score=27.52 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=36.0
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSH 96 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~gggh 96 (539)
..| ...+.+..|+...+++|+.++.+.|++.|++..++--.|+
T Consensus 47 ~~W--~~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 47 NEW--LHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHH--HHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHH--HHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 457 4567899999999999999999999999999777745565
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=27.74 E-value=55 Score=27.27 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=35.5
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSH 96 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~gggh 96 (539)
..| ...+.|..|+...+++|+.++.+.|.+.|++..++--.|+
T Consensus 48 ~~W--~~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 48 EAW--FREGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp HHH--HHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred HHH--HHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 446 4567789999999999999999999999999777745565
No 45
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=24.34 E-value=60 Score=26.83 Aligned_cols=43 Identities=9% Similarity=-0.034 Sum_probs=35.4
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSH 96 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~gggh 96 (539)
..| ...+.|..|+...+++|+.++.+.|++.|++..++--.|+
T Consensus 44 ~~W--~~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 44 NEW--YDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp HHH--HHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred HHH--HHCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 446 3567789999999999999999999999999777745555
No 46
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=21.21 E-value=58 Score=26.81 Aligned_cols=43 Identities=21% Similarity=0.132 Sum_probs=33.9
Q ss_pred CCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 009245 52 GMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSH 96 (539)
Q Consensus 52 ~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~gggh 96 (539)
..| ...+.|..|+...+++|+.++.+.|++.|++..++--.|+
T Consensus 42 ~~W--~~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 42 DEW--LREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp HHH--HHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred HHH--HHCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 346 3567789999999999999999999999998766633444
Done!