Query 009246
Match_columns 539
No_of_seqs 388 out of 2407
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 22:08:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 2.3E-94 7.9E-99 773.0 58.6 528 6-536 3-545 (554)
2 4b9q_A Chaperone protein DNAK; 100.0 3.5E-94 1.2E-98 778.6 52.7 517 7-536 2-542 (605)
3 2kho_A Heat shock protein 70; 100.0 9.6E-92 3.3E-96 759.5 45.1 516 8-536 3-542 (605)
4 3d2f_A Heat shock protein homo 100.0 3E-91 1E-95 760.6 47.9 522 8-536 3-559 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 3.2E-85 1.1E-89 696.9 55.2 488 8-534 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 8.3E-65 2.8E-69 527.1 44.6 368 5-373 21-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.5E-63 5E-68 516.2 44.3 362 7-372 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 5.8E-62 2E-66 506.3 41.0 364 6-373 12-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 2.5E-60 8.7E-65 489.9 38.6 356 8-371 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 4E-43 1.4E-47 356.1 23.8 305 7-372 3-327 (344)
11 3dob_A Heat shock 70 kDa prote 100.0 4.9E-30 1.7E-34 224.9 15.8 151 384-534 2-152 (152)
12 3h0x_A 78 kDa glucose-regulate 100.0 8.7E-30 3E-34 223.7 15.3 151 384-534 2-152 (152)
13 3dqg_A Heat shock 70 kDa prote 100.0 8.4E-30 2.9E-34 223.1 14.5 150 384-534 2-151 (151)
14 2fsj_A Hypothetical protein TA 100.0 2.6E-30 8.7E-35 261.0 10.6 230 104-369 96-343 (346)
15 3h1q_A Ethanolamine utilizatio 100.0 3.6E-28 1.2E-32 237.8 18.9 203 106-368 70-272 (272)
16 3n8e_A Stress-70 protein, mito 100.0 3.2E-29 1.1E-33 225.7 9.9 155 380-535 18-172 (182)
17 4e81_A Chaperone protein DNAK; 100.0 1.4E-28 4.8E-33 229.3 10.3 153 383-536 2-154 (219)
18 2op6_A Heat shock 70 kDa prote 99.9 1.8E-27 6.1E-32 210.4 15.4 151 384-534 2-152 (152)
19 1k8k_A ARP3, actin-like protei 99.9 1.3E-27 4.6E-32 248.3 17.0 228 128-370 107-387 (418)
20 2ych_A Competence protein PILM 99.9 1E-27 3.5E-32 245.9 14.2 299 6-350 12-334 (377)
21 4a2a_A Cell division protein F 99.9 3.3E-26 1.1E-30 235.9 20.6 198 143-371 169-394 (419)
22 2fxu_A Alpha-actin-1, actin, a 99.9 1.1E-26 3.6E-31 237.8 15.3 292 6-369 4-348 (375)
23 1u00_A HSC66, chaperone protei 99.9 1.1E-25 3.8E-30 211.9 10.4 151 385-536 1-151 (227)
24 1q5l_A Chaperone protein DNAK; 99.9 1.3E-23 4.4E-28 180.6 12.2 119 379-497 14-132 (135)
25 2zgy_A Plasmid segregation pro 99.9 3.9E-24 1.3E-28 213.9 7.3 228 101-368 72-319 (320)
26 1k8k_B ARP2, actin-like protei 99.8 3.4E-22 1.2E-26 205.4 4.8 214 130-370 106-364 (394)
27 3js6_A Uncharacterized PARM pr 99.8 7.7E-20 2.6E-24 184.3 11.9 205 130-372 115-338 (355)
28 4ehu_A Activator of 2-hydroxyi 99.8 6.1E-19 2.1E-23 172.5 14.9 216 106-372 36-256 (276)
29 4apw_A ALP12; actin-like prote 99.7 8.6E-19 2.9E-23 175.3 5.6 204 129-372 106-326 (329)
30 3qb0_A Actin-related protein 4 99.6 1.9E-15 6.5E-20 157.2 15.8 175 4-234 20-209 (498)
31 3dwl_A Actin-related protein 3 99.6 1.7E-16 5.7E-21 163.6 7.6 224 129-369 124-395 (427)
32 4fo0_A Actin-related protein 8 99.4 1.5E-11 5.2E-16 133.1 21.8 118 105-235 170-294 (593)
33 2d0o_A DIOL dehydratase-reacti 99.3 1.5E-11 5.2E-16 125.0 13.9 197 141-369 367-603 (610)
34 1nbw_A Glycerol dehydratase re 99.3 1.4E-11 4.8E-16 125.7 12.6 194 143-368 371-604 (607)
35 1hux_A Activator of (R)-2-hydr 98.9 4E-08 1.4E-12 94.9 18.2 173 158-372 76-258 (270)
36 2ews_A Pantothenate kinase; PA 98.5 5E-06 1.7E-10 80.0 16.8 47 322-368 237-286 (287)
37 4am6_A Actin-like protein ARP8 98.2 4.2E-06 1.4E-10 88.2 9.4 96 129-235 222-318 (655)
38 2i7n_A Pantothenate kinase 1; 97.6 0.0014 4.9E-08 64.7 16.4 70 294-368 279-358 (360)
39 1t6c_A Exopolyphosphatase; alp 97.2 0.00076 2.6E-08 66.1 8.8 80 143-229 99-178 (315)
40 3mdq_A Exopolyphosphatase; str 97.0 0.016 5.6E-07 56.6 16.0 80 143-228 91-170 (315)
41 4db3_A Glcnac kinase, N-acetyl 97.0 0.27 9.3E-06 48.1 24.8 89 105-202 60-164 (327)
42 3vgl_A Glucokinase; ROK family 97.0 0.046 1.6E-06 53.5 19.2 88 105-202 37-140 (321)
43 3r8e_A Hypothetical sugar kina 96.8 0.032 1.1E-06 54.7 16.2 48 322-369 261-318 (321)
44 2ch5_A NAGK protein; transfera 96.8 0.49 1.7E-05 46.6 27.9 84 104-196 44-133 (347)
45 3l0q_A Xylulose kinase; xlylul 96.7 0.0039 1.3E-07 66.3 9.0 84 288-373 409-492 (554)
46 2itm_A Xylulose kinase, xylulo 96.7 0.0035 1.2E-07 65.4 8.3 79 294-373 359-437 (484)
47 2zf5_O Glycerol kinase; hypert 96.6 0.0054 1.9E-07 64.2 9.0 77 294-373 367-443 (497)
48 4bc3_A Xylulose kinase; transf 96.6 0.0055 1.9E-07 64.8 9.1 77 294-372 407-483 (538)
49 3ll3_A Gluconate kinase; xylul 96.5 0.0056 1.9E-07 64.2 8.6 77 295-373 367-443 (504)
50 3i8b_A Xylulose kinase; strain 96.5 0.0047 1.6E-07 64.9 7.7 77 295-373 398-474 (515)
51 3hz6_A Xylulokinase; xylulose, 96.4 0.0065 2.2E-07 63.8 8.4 76 294-373 377-453 (511)
52 2e2o_A Hexokinase; acetate and 96.3 0.79 2.7E-05 44.0 26.6 49 322-371 240-288 (299)
53 2gup_A ROK family protein; sug 96.3 0.22 7.5E-06 47.8 18.4 49 322-370 228-287 (292)
54 3g25_A Glycerol kinase; IDP007 96.2 0.0073 2.5E-07 63.3 7.6 77 295-373 377-454 (501)
55 3jvp_A Ribulokinase; PSI-II, N 96.2 0.0075 2.6E-07 64.3 7.6 77 295-373 413-490 (572)
56 2qm1_A Glucokinase; alpha-beta 96.1 0.17 5.9E-06 49.3 16.8 48 322-369 263-320 (326)
57 3ezw_A Glycerol kinase; glycer 96.1 0.007 2.4E-07 63.8 6.9 74 295-373 375-452 (526)
58 4e1j_A Glycerol kinase; struct 96.1 0.0062 2.1E-07 64.1 6.4 76 295-373 396-475 (520)
59 2dpn_A Glycerol kinase; thermu 96.1 0.015 5E-07 60.9 9.2 78 294-373 370-448 (495)
60 3ifr_A Carbohydrate kinase, FG 96.1 0.0072 2.5E-07 63.5 6.7 73 296-373 375-450 (508)
61 2p3r_A Glycerol kinase; glycer 96.1 0.0077 2.6E-07 63.2 6.9 77 295-373 374-451 (510)
62 4htl_A Beta-glucoside kinase; 96.1 0.79 2.7E-05 44.0 20.8 50 322-371 238-292 (297)
63 3h3n_X Glycerol kinase; ATP-bi 96.0 0.0087 3E-07 62.8 7.1 77 295-373 376-453 (506)
64 3zyy_X Iron-sulfur cluster bin 96.0 0.2 6.9E-06 53.1 17.3 82 285-367 499-581 (631)
65 3vov_A Glucokinase, hexokinase 95.9 1.4 4.7E-05 42.5 24.6 49 322-370 238-295 (302)
66 2d4w_A Glycerol kinase; alpha 95.8 0.012 4E-07 61.8 7.0 73 296-373 377-453 (504)
67 2ap1_A Putative regulator prot 95.8 0.22 7.5E-06 48.7 15.8 68 128-202 81-164 (327)
68 3cer_A Possible exopolyphospha 95.8 0.0082 2.8E-07 59.4 5.2 83 143-228 104-191 (343)
69 2w40_A Glycerol kinase, putati 95.7 0.015 5.1E-07 61.0 7.1 74 295-373 379-457 (503)
70 1z6r_A MLC protein; transcript 95.6 0.6 2.1E-05 47.1 18.6 49 322-370 335-393 (406)
71 2uyt_A Rhamnulokinase; rhamnos 95.3 0.024 8.3E-07 59.1 7.0 76 289-370 363-439 (489)
72 2hoe_A N-acetylglucosamine kin 95.3 1.3 4.5E-05 44.1 19.5 89 104-201 123-229 (380)
73 1z05_A Transcriptional regulat 94.9 1.9 6.7E-05 43.7 19.7 92 104-202 143-252 (429)
74 1zc6_A Probable N-acetylglucos 94.7 3.2 0.00011 39.8 22.2 63 297-369 228-292 (305)
75 2ivn_A O-sialoglycoprotein end 94.6 3.6 0.00012 40.0 27.2 65 302-371 230-299 (330)
76 1u6z_A Exopolyphosphatase; alp 94.4 0.079 2.7E-06 55.4 8.0 78 144-228 99-176 (513)
77 3h6e_A Carbohydrate kinase, FG 93.5 0.1 3.5E-06 54.2 6.7 71 294-370 362-435 (482)
78 3hi0_A Putative exopolyphospha 93.1 0.19 6.4E-06 52.5 7.9 77 143-227 102-178 (508)
79 3qbx_A Anhydro-N-acetylmuramic 91.0 0.69 2.4E-05 45.6 8.6 74 296-372 261-338 (371)
80 3en9_A Glycoprotease, O-sialog 90.7 7.8 0.00027 40.5 17.2 184 127-345 72-272 (540)
81 3ven_A O-carbamoyltransferase 90.2 4.3 0.00015 42.5 14.3 79 290-373 280-360 (576)
82 3cqy_A Anhydro-N-acetylmuramic 88.4 1.4 4.7E-05 43.4 8.5 74 295-372 267-344 (370)
83 3bex_A Type III pantothenate k 87.8 3.7 0.00013 38.2 10.8 46 288-334 178-223 (249)
84 3eno_A Putative O-sialoglycopr 85.8 2.3 7.9E-05 41.5 8.5 68 300-372 233-305 (334)
85 3ttc_A HYPF, transcriptional r 84.4 2.6 8.9E-05 44.9 8.6 50 321-370 599-651 (657)
86 3vth_A Hydrogenase maturation 83.8 2.2 7.5E-05 46.5 7.9 51 322-372 694-749 (761)
87 3o8m_A Hexokinase; rnaseh-like 82.6 6.8 0.00023 40.2 10.6 56 141-202 185-242 (485)
88 4g9i_A Hydrogenase maturation 81.1 2.8 9.6E-05 45.8 7.5 62 305-371 694-760 (772)
89 2yhx_A Hexokinase B; transfera 78.0 7.1 0.00024 39.8 9.0 93 104-202 103-220 (457)
90 3hm8_A Hexokinase-3; glucose, 77.0 21 0.00072 36.0 11.9 54 141-200 160-216 (445)
91 3epq_A Putative fructokinase; 76.1 20 0.00067 34.2 11.2 51 144-201 90-140 (302)
92 3aap_A Ectonucleoside triphosp 75.5 3.5 0.00012 40.6 5.7 46 155-202 108-158 (353)
93 3ifr_A Carbohydrate kinase, FG 75.2 1.2 4.1E-05 46.4 2.4 24 1-24 1-24 (508)
94 2e1z_A Propionate kinase; TDCD 72.0 53 0.0018 32.6 13.1 26 320-345 329-355 (415)
95 2yhw_A Bifunctional UDP-N-acet 71.5 55 0.0019 31.5 13.4 51 144-201 124-174 (343)
96 4e1j_A Glycerol kinase; struct 68.6 2.7 9.3E-05 43.8 3.2 19 6-24 25-43 (520)
97 3mcp_A Glucokinase; structural 68.3 20 0.00069 35.2 9.4 47 154-202 108-165 (366)
98 2aa4_A Mannac kinase, putative 68.2 9.5 0.00033 35.9 6.9 47 322-368 234-286 (289)
99 3f9m_A Glucokinase; hexokinase 66.2 47 0.0016 33.8 11.7 55 141-202 184-241 (470)
100 1iv0_A Hypothetical protein; r 65.9 3.7 0.00012 32.1 2.7 17 8-24 2-18 (98)
101 3i8b_A Xylulose kinase; strain 65.0 3.1 0.00011 43.3 2.8 20 5-24 3-22 (515)
102 3l0q_A Xylulose kinase; xlylul 64.7 2.9 9.9E-05 44.0 2.5 19 6-24 4-22 (554)
103 3cj1_A Ectonucleoside triphosp 64.6 9.3 0.00032 38.9 6.2 20 183-202 189-208 (456)
104 3h3n_X Glycerol kinase; ATP-bi 64.2 3.3 0.00011 43.0 2.9 22 1-24 1-22 (506)
105 3h6e_A Carbohydrate kinase, FG 63.5 2.7 9.4E-05 43.3 2.0 19 6-24 5-23 (482)
106 3ll3_A Gluconate kinase; xylul 62.3 3.2 0.00011 43.0 2.3 19 6-24 3-21 (504)
107 2uyt_A Rhamnulokinase; rhamnos 61.3 3.4 0.00012 42.6 2.3 19 6-24 3-21 (489)
108 3htv_A D-allose kinase, alloki 60.5 34 0.0012 32.6 9.2 50 321-370 239-299 (310)
109 3jvp_A Ribulokinase; PSI-II, N 59.9 3.8 0.00013 43.3 2.4 19 6-24 4-22 (572)
110 3ezw_A Glycerol kinase; glycer 59.9 4 0.00014 42.6 2.5 19 6-24 3-21 (526)
111 3hz6_A Xylulokinase; xylulose, 58.8 4.7 0.00016 41.9 2.9 19 6-24 4-22 (511)
112 1cza_N Hexokinase type I; stru 58.1 75 0.0026 35.4 12.6 55 141-201 183-240 (917)
113 1nu0_A Hypothetical protein YQ 58.0 6 0.00021 33.0 2.8 17 8-24 4-20 (138)
114 2p3r_A Glycerol kinase; glycer 57.6 4.8 0.00017 41.8 2.7 19 6-24 2-20 (510)
115 1cza_N Hexokinase type I; stru 57.3 1.3E+02 0.0045 33.4 14.3 57 140-202 630-689 (917)
116 4bc3_A Xylulose kinase; transf 56.1 4.8 0.00017 42.1 2.4 19 6-24 9-27 (538)
117 1saz_A Probable butyrate kinas 55.7 22 0.00075 35.2 7.1 48 321-368 295-346 (381)
118 1zbs_A Hypothetical protein PG 54.4 13 0.00044 35.2 4.9 66 297-370 212-280 (291)
119 2dpn_A Glycerol kinase; thermu 53.3 6.1 0.00021 40.8 2.6 18 7-24 2-19 (495)
120 3o8m_A Hexokinase; rnaseh-like 52.7 44 0.0015 34.2 8.8 25 182-206 78-102 (485)
121 1vhx_A Putative holliday junct 52.6 6.4 0.00022 33.4 2.2 17 8-24 4-20 (150)
122 2w40_A Glycerol kinase, putati 50.4 6.4 0.00022 40.7 2.2 18 7-24 4-21 (503)
123 2zf5_O Glycerol kinase; hypert 50.2 7.6 0.00026 40.1 2.7 18 7-24 3-20 (497)
124 3zx3_A Ectonucleoside triphosp 50.0 21 0.00072 36.1 5.8 45 157-202 150-199 (452)
125 3g25_A Glycerol kinase; IDP007 48.8 8.2 0.00028 39.9 2.7 18 7-24 6-23 (501)
126 2yhx_A Hexokinase B; transfera 48.4 87 0.003 31.7 10.2 53 182-234 59-117 (457)
127 3cet_A Conserved archaeal prot 47.4 11 0.00037 36.4 3.1 72 288-367 243-321 (334)
128 2q2r_A Glucokinase 1, putative 45.8 38 0.0013 33.2 7.0 19 6-24 28-46 (373)
129 3fcg_A F1 capsule-anchoring pr 45.1 51 0.0017 25.1 5.9 55 426-494 24-78 (90)
130 2yhw_A Bifunctional UDP-N-acet 45.0 76 0.0026 30.4 9.0 18 7-24 30-47 (343)
131 3epq_A Putative fructokinase; 44.1 40 0.0014 32.0 6.6 49 322-370 225-289 (302)
132 3djc_A Type III pantothenate k 44.0 11 0.00039 35.2 2.6 70 288-368 182-253 (266)
133 1hjr_A Holliday junction resol 43.8 12 0.00042 31.9 2.5 17 8-24 2-18 (158)
134 4ep4_A Crossover junction endo 42.4 13 0.00045 32.0 2.5 17 8-24 2-18 (166)
135 2itm_A Xylulose kinase, xylulo 42.1 12 0.0004 38.5 2.6 16 9-24 2-17 (484)
136 1msz_A DNA-binding protein smu 41.7 25 0.00085 26.5 3.6 28 131-158 34-61 (86)
137 2d4w_A Glycerol kinase; alpha 40.7 12 0.00042 38.5 2.5 17 8-24 3-19 (504)
138 4am6_A Actin-like protein ARP8 39.0 14 0.00049 39.0 2.7 28 6-33 39-72 (655)
139 3f9m_A Glucokinase; hexokinase 38.5 96 0.0033 31.5 8.6 25 182-206 75-99 (470)
140 1hnj_A Beta-ketoacyl-acyl carr 38.2 44 0.0015 31.7 5.9 49 295-346 211-259 (317)
141 3zyy_X Iron-sulfur cluster bin 37.7 1.3E+02 0.0043 31.9 9.6 96 183-334 205-302 (631)
142 1zxo_A Conserved hypothetical 37.4 3.9 0.00013 38.9 -1.8 63 299-368 212-276 (291)
143 1mzj_A Beta-ketoacylsynthase I 33.0 55 0.0019 31.4 5.7 46 297-345 226-271 (339)
144 1ub7_A 3-oxoacyl-[acyl-carrier 32.8 56 0.0019 31.0 5.7 48 296-346 214-261 (322)
145 2x3e_A 3-oxoacyl-[acyl-carrier 32.4 60 0.002 31.0 5.9 46 297-345 219-264 (331)
146 1zow_A 3-oxoacyl-[acyl-carrier 31.2 69 0.0024 30.2 6.0 47 297-346 207-253 (313)
147 1nbw_A Glycerol dehydratase re 30.5 23 0.00078 36.7 2.4 43 130-172 132-175 (607)
148 2ebd_A 3-oxoacyl-[acyl-carrier 29.6 68 0.0023 30.1 5.7 46 298-346 206-251 (309)
149 1bdg_A Hexokinase; phosphotran 28.8 1.8E+02 0.0061 29.3 8.8 24 182-205 66-89 (451)
150 3cet_A Conserved archaeal prot 28.5 66 0.0022 31.0 5.1 37 160-202 109-145 (334)
151 1sz2_A Glucokinase, glucose ki 28.2 1.3E+02 0.0046 28.5 7.6 49 153-202 100-156 (332)
152 1g99_A Acetate kinase; alpha/b 28.1 67 0.0023 31.9 5.3 45 297-345 302-347 (408)
153 1zbs_A Hypothetical protein PG 27.7 29 0.00099 32.7 2.6 61 127-196 59-121 (291)
154 3hm8_A Hexokinase-3; glucose, 27.5 1.7E+02 0.006 29.3 8.3 30 182-212 57-86 (445)
155 1u6e_A 3-oxoacyl-[acyl-carrier 24.7 97 0.0033 29.5 5.8 45 298-345 228-272 (335)
156 3htv_A D-allose kinase, alloki 24.7 29 0.001 33.1 2.0 43 154-201 107-149 (310)
157 1zxo_A Conserved hypothetical 23.8 28 0.00094 32.8 1.6 59 128-195 58-118 (291)
158 1rlw_A Phospholipase A2, CALB 23.1 2.6E+02 0.009 21.6 9.8 68 408-480 50-118 (126)
159 3eno_A Putative O-sialoglycopr 22.3 1.3E+02 0.0043 29.0 6.0 44 298-341 50-93 (334)
160 1ted_A PKS18; thiolase fold, s 22.2 92 0.0031 30.6 5.2 45 298-345 283-327 (393)
161 2h3g_X Biosynthetic protein; p 22.1 44 0.0015 31.2 2.6 72 288-369 180-251 (268)
162 3qvl_A Putative hydantoin race 22.0 79 0.0027 28.9 4.3 54 301-365 159-212 (245)
163 4dfe_A 3-oxoacyl-[acyl-carrier 21.9 1.3E+02 0.0045 28.7 6.1 47 296-345 228-274 (333)
164 2ap1_A Putative regulator prot 21.6 2.1E+02 0.0073 26.9 7.6 52 182-234 22-73 (327)
165 1woq_A Inorganic polyphosphate 21.2 80 0.0028 29.0 4.3 47 322-371 215-262 (267)
166 1bdg_A Hexokinase; phosphotran 21.1 68 0.0023 32.4 4.0 57 140-202 171-229 (451)
167 3lm2_A Putative kinase; struct 21.1 38 0.0013 30.7 1.8 40 153-202 90-129 (226)
168 1sz2_A Glucokinase, glucose ki 20.9 40 0.0014 32.4 2.1 19 6-24 13-31 (332)
169 3ist_A Glutamate racemase; str 20.7 1.2E+02 0.004 28.2 5.2 44 320-367 177-220 (269)
170 2qm1_A Glucokinase; alpha-beta 20.6 2.4E+02 0.0082 26.4 7.7 26 184-209 6-31 (326)
171 3lwd_A 6-phosphogluconolactona 20.3 1.4E+02 0.0048 26.8 5.5 47 292-343 9-55 (226)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.3e-94 Score=772.98 Aligned_cols=528 Identities=76% Similarity=1.129 Sum_probs=500.8
Q ss_pred CCCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChh
Q 009246 6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (539)
++.+||||||||||+||++ .+||+|+|.++++++|..|+++...+|.++++++||++|++++++.
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 5568999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred hhccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009246 71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA 150 (539)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 150 (539)
++..++.+||++.. .++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999984 47788888888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHH
Q 009246 151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230 (539)
Q Consensus 151 a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 230 (539)
++.||++++++++||+|||++|+..... ..+.++||||+||||||++++++.++.++++++.++..+||++||+.|.+
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999876542 24688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q 009246 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEK 310 (539)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~ 310 (539)
++.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+++|.++...|+|++|+++++|+++++.++|++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~ 319 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK 319 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccceeeeecccc
Q 009246 311 CLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPL 390 (539)
Q Consensus 311 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~~d~~~~ 390 (539)
+|+++++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++.+++.+.|++|+
T Consensus 320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~ 399 (554)
T 1yuw_A 320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL 399 (554)
T ss_dssp HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence 99999999999999999999999999999999999778888889999999999999999998654455678899999999
Q ss_pred ccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEEEE
Q 009246 391 SLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFD 470 (539)
Q Consensus 391 s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~~~ 470 (539)
+||+++.++.+.+||+||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++++|.++|+++|+
T Consensus 400 slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 479 (554)
T 1yuw_A 400 SLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479 (554)
T ss_dssp CEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred EEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246 471 IDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM 536 (539)
Q Consensus 471 ~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (539)
+|.||+|+|++.+..||++.+++++.....++++++++|.+...++..+++.++++.++||+||++
T Consensus 480 id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~ 545 (554)
T 1yuw_A 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESY 545 (554)
T ss_dssp ECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSC
T ss_pred EccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988777899999999999999999999999999999999986
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=3.5e-94 Score=778.61 Aligned_cols=517 Identities=51% Similarity=0.814 Sum_probs=487.4
Q ss_pred CCEEEEEcCccceeeeEE---------------ecceEEEecC-CceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChh
Q 009246 7 GPAIGIDLGTTYSCVGVW---------------TTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (539)
+.+||||||||||+||++ .+||+|+|.+ +++++|..|+.+...+|.++++++||++|+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 468999999999999998 7899999974 579999999999999999999999999999999999
Q ss_pred hhccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009246 71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA 150 (539)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 150 (539)
++.+.+.+||++..++++.+.+.+ .+..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~----~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE----TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE----CCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999998888776655 3478999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeC----CEEEEEEecCCCCCchHHHHH
Q 009246 151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDN 226 (539)
Q Consensus 151 a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~----~~~~v~~~~~~~~lGG~~~d~ 226 (539)
++.|||+++++++||+|||++|+.... ..+.++||||+||||||++++++.+ +.++++++.++.++||.+||+
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~---~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSC---CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhcc---CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence 999999999999999999999987664 2578999999999999999999988 899999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCC----eeeEEEEcHHHHHHHHHHHHH
Q 009246 227 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFR 302 (539)
Q Consensus 227 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g----~d~~~~itr~~~e~~~~~~~~ 302 (539)
+|++|+.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.|||++|+++++|+++
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~ 314 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999998888899999999999999999999999998888765433 678899999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccce
Q 009246 303 KCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDL 382 (539)
Q Consensus 303 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~ 382 (539)
++..+++++|+.+++...+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++
T Consensus 315 ~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~ 389 (605)
T 4b9q_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDV 389 (605)
T ss_dssp HTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSE
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCce
Confidence 9999999999999999999999999999999999999999999 6778888999999999999999999864 5678
Q ss_pred eeeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCc
Q 009246 383 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 462 (539)
Q Consensus 383 ~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~ 462 (539)
.+.|++|+|||+++.++.|.+||+||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.
T Consensus 390 ~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 4b9q_A 390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp EEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246 463 PQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM 536 (539)
Q Consensus 463 ~~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (539)
++|+|+|++|.||+|+|++.+..||++.++++++.. .++++++++|.+.+.++..+++..+++.++||+||++
T Consensus 470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~-~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~ 542 (605)
T 4b9q_A 470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHL 542 (605)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTCCEECCEEESCC-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCCC-CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998765 6889999999999999999999999999999998864
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=9.6e-92 Score=759.53 Aligned_cols=516 Identities=52% Similarity=0.823 Sum_probs=482.3
Q ss_pred CEEEEEcCccceeeeEE---------------ecceEEEec-CCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhh
Q 009246 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (539)
.+||||||||||+||++ .+||+|+|. ++++++|..|+.+...+|.++++++||++|+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999998 589999995 46799999999999999999999999999999999999
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009246 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (539)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 151 (539)
+.+.+.+||++..+.++.+.+.+ . ++.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98888999999888888777665 3 3689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEe----CCEEEEEEecCCCCCchHHHHHH
Q 009246 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 227 (539)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~ 227 (539)
+.|||+++++++||+|||++|+.... ..+.++||||+||||||+|++++. ++.++++++.|+..+||++||+.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~---~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~ 235 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSS---SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhccc---CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHH
Confidence 99999999999999999999987653 257889999999999999999998 78999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHH
Q 009246 228 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRK 303 (539)
Q Consensus 228 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~---g-~d~~~~itr~~~e~~~~~~~~~ 303 (539)
|++++.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+.+ | .++...|||++|+++++|++++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~ 315 (605)
T 2kho_A 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (605)
T ss_dssp HHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGG
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999998888886654 3 5677899999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCcccccee
Q 009246 304 CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLL 383 (539)
Q Consensus 304 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~ 383 (539)
+..+|+++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. ++++.
T Consensus 316 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~ 390 (605)
T 2kho_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVL 390 (605)
T ss_dssp GTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCC
T ss_pred HHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCce
Confidence 999999999999999899999999999999999999999999 5678888999999999999999988753 46788
Q ss_pred eeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcC
Q 009246 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 384 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+.|++|++||+++.++.|.+||+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|++|+|.+
T Consensus 391 l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~ 470 (605)
T 2kho_A 391 LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMP 470 (605)
T ss_dssp CSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCS
T ss_pred EEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM 536 (539)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (539)
+|+++|++|.||+|+|++.+..||++.+++++.. ..++++++++|.+...++..+++.++++.++||+||++
T Consensus 471 ~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~ 542 (605)
T 2kho_A 471 QIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHL 542 (605)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887 67889999999999999999999999999999998864
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=3e-91 Score=760.63 Aligned_cols=522 Identities=28% Similarity=0.460 Sum_probs=483.1
Q ss_pred CEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhhh
Q 009246 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQ 72 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 72 (539)
.+||||||||||+||++ .+||+|+|.++++++|..|+++...+|.++++++||++|+.++++.++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 38999999999999997 689999999999999999999999999999999999999999999999
Q ss_pred ccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 009246 73 GDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGV 152 (539)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 152 (539)
.+.+++||++....++.+.+.+.+.++.+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999888888888888888778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeechhHHHHHhcccccccCC---CCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHH
Q 009246 153 IAGLNVMRIINEPTAAAIAYGLDKKATS---VGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV 229 (539)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~---~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 229 (539)
.|||+++++++||+|||++|+..+.... ..+.++||||+||||||+|++++.++.++++++.++..+||++||+.|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 9999999999999999999987653211 3578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q 009246 230 NHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVE 309 (539)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~ 309 (539)
+++.++|.++++.++..+++.+.+|+.+||++|+.||...++.+.++.+++|.++...|||++|+++++|+++++..+|+
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888899999999999999999999989999999888899999999999999999999999999999
Q ss_pred HHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccceeeeeccc
Q 009246 310 KCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTP 389 (539)
Q Consensus 310 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~~d~~~ 389 (539)
++|+.+++++.+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++ .++++++.+.|++|
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEEC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEeeee
Confidence 999999999999999999999999999999999999 567888899999999999999999984 34577899999999
Q ss_pred cccceeeecC----eEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEE-EecCccccc-CCcceeEEEEeCCCCCCCCcC
Q 009246 390 LSLGLETAGG----VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV-YEGERTRTR-DNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 390 ~s~gi~~~~~----~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i-~~g~~~~~~-~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+|||+++.++ .+.+||++|+++|++++.+|++..++ .+.+ |+|++..+. +|..||+|.|.|+|+++.|.+
T Consensus 400 ~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~ 475 (675)
T 3d2f_A 400 YSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDS 475 (675)
T ss_dssp SCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSC
T ss_pred cceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCCCc
Confidence 9999999876 49999999999999999999886544 3444 679888887 999999999999999999974
Q ss_pred -EEEEEEEecCCeeEEEEEE----------EcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCC
Q 009246 464 -QITVCFDIDANGILNVSAE----------DKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMP 532 (539)
Q Consensus 464 -~i~v~~~~d~~g~l~v~~~----------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (539)
+|+|+|++|.||+|+|++. ++.||++.+++++.....++++++++|.+...++..+++.++++.++||+
T Consensus 476 ~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~ 555 (675)
T 3d2f_A 476 VPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNT 555 (675)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999999999999996 78999999999987655788999999999999999999999999999999
Q ss_pred CCCC
Q 009246 533 WKTM 536 (539)
Q Consensus 533 ~~~~ 536 (539)
||++
T Consensus 556 le~~ 559 (675)
T 3d2f_A 556 LEEY 559 (675)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=3.2e-85 Score=696.93 Aligned_cols=488 Identities=52% Similarity=0.816 Sum_probs=450.0
Q ss_pred CEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhhh
Q 009246 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQ 72 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 72 (539)
.+||||||||||++|++ .+||+|+|.++++++|..|+.+...+| ++++++||++|+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 58999999999999998 399999998888999999999998999 999999999998432
Q ss_pred ccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 009246 73 GDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGV 152 (539)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 152 (539)
+ ... +..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIE--GKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EET--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 112 24679999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHH
Q 009246 153 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 232 (539)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 232 (539)
.||++++++++||+|||++|+.... .+.++||||+||||||++++++.++.++++++.++..+||.+||+.|.+++
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 209 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYL 209 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999987654 578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHHHHHHH
Q 009246 233 VQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRKCMEPV 308 (539)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~---g-~d~~~~itr~~~e~~~~~~~~~i~~~i 308 (539)
.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+.+ | .++.+.|+|++|+++++|+++++.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 289 (509)
T 2v7y_A 210 VNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPV 289 (509)
T ss_dssp HHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999888888788899999999999999999999988888886654 3 467789999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccceeeeecc
Q 009246 309 EKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVT 388 (539)
Q Consensus 309 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~~d~~ 388 (539)
+++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++
T Consensus 290 ~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~ 364 (509)
T 2v7y_A 290 RQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVT 364 (509)
T ss_dssp HHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBC
T ss_pred HHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEee
Confidence 9999999998889999999999999999999999999 5677888999999999999999999863 4678899999
Q ss_pred ccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEE
Q 009246 389 PLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 468 (539)
Q Consensus 389 ~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~ 468 (539)
|++||+++.++.+.+||+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.++|.++|+++
T Consensus 365 p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~ 444 (509)
T 2v7y_A 365 PLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVT 444 (509)
T ss_dssp SSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEE
T ss_pred ccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCC
Q 009246 469 FDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWK 534 (539)
Q Consensus 469 ~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
|++|.||+|+|++.+..||++.+++++.. ..++++++++|.+...++..+++..+++.++||+||
T Consensus 445 f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 445 FDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999887 568889999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8.3e-65 Score=527.11 Aligned_cols=368 Identities=79% Similarity=1.201 Sum_probs=346.7
Q ss_pred CCCCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCCh
Q 009246 5 GEGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDA 69 (539)
Q Consensus 5 ~~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 69 (539)
+.+.+||||||||||++|++ .+||+|+|.++++++|..|..+...+|.++++++|+++|++++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 35679999999999999988 679999999999999999999999999999999999999999999
Q ss_pred hhhccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHH
Q 009246 70 SVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKD 149 (539)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~ 149 (539)
.++...+.+||.+.. .++.+.+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 999999999999986 6788889898888788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHH
Q 009246 150 AGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV 229 (539)
Q Consensus 150 Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 229 (539)
|++.||++++.+++||+|||++|+.........+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 99999999999999999999999877653333678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q 009246 230 NHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVE 309 (539)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~ 309 (539)
+++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.+|.++...|+|++|+++++++++++.+.|.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 310 KCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 310 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++|+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999998999999999999999999999999998888888999999999999999999874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.5e-63 Score=516.22 Aligned_cols=362 Identities=65% Similarity=1.026 Sum_probs=344.5
Q ss_pred CCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhh
Q 009246 7 GPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (539)
..+||||||||||++|++ .+||+|+|.++++++|..|..+...+|.++++++|+++|++++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 578999999999999988 56999999999999999999999999999999999999999999999
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009246 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (539)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 151 (539)
+.+.+.+||.+. +.++.+.+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 6788888988888888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHH
Q 009246 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH 231 (539)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~ 231 (539)
+.||++++.+++||+|||++|+.... ..+.+++|||+||||+|++++++.++.+++++..++..+||.+||+.|.++
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKS---DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccC---CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 99999999999999999999976654 357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q 009246 232 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKC 311 (539)
Q Consensus 232 l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~ 311 (539)
+.++|.++++.++..+++...+|+.+||++|+.|+......+.++.+.+|.++...++|++|+++++++++++.+.|.++
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 333 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKV 333 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 312 LRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 312 l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
|+.+++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.++
T Consensus 334 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 334 LQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999889999999999999999999999999888888899999999999999999764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.8e-62 Score=506.27 Aligned_cols=364 Identities=30% Similarity=0.529 Sum_probs=326.2
Q ss_pred CCCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChh
Q 009246 6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (539)
++.+||||||||||++|++ .+||+|+|.++++++|..|..+...+|.++++++|+++|+.++++.
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 4679999999999999987 6899999999999999999999999999999999999999988776
Q ss_pred hhccccccCeEEEecCCCCceEEEEEc----CCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHH
Q 009246 71 VQGDMKLWPFKVIAGPADKPMIGVNYK----GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQA 146 (539)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~ 146 (539)
++... +++.+. +.++...+.+... +....++|+++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 55443 333332 3455566666544 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHH
Q 009246 147 TKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN 226 (539)
Q Consensus 147 l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 226 (539)
+++|++.|||+++.+++||+|||++|+.... ....+..++|||+||||+|++++++.++.++++++.++..+||.+||+
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~-~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPE-ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccc-cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 9999999999999999999999999987642 134678999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHH
Q 009246 227 RMVNHFVQEFKRKNK--KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKC 304 (539)
Q Consensus 227 ~l~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i 304 (539)
.|.+++.++|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+.++.++...|||++|+++++|+++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999998888 677778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCc-cc------cccCCCchhhHhHHHHHHHHHhC
Q 009246 305 MEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGK-EL------CKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 305 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~-~v------~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
.++|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.. .+ ....||++|||+|||++|+....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 99999999999999889999999999999999999999999654 34 56789999999999999998763
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.5e-60 Score=489.87 Aligned_cols=356 Identities=53% Similarity=0.847 Sum_probs=323.5
Q ss_pred CEEEEEcCccceeeeEE---------------ecceEEEecC-CceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhh
Q 009246 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (539)
.+||||||||||++|++ .+||+|+|.. +++++|..|+.+...+|+++++++|+++|+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 57999999999999988 4899999964 6789999999999999999999999999999999989
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009246 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (539)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 151 (539)
+...+.+||++..+.++...+.+ + ++.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~--g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888999999888877766655 3 3578999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEe----CCEEEEEEecCCCCCchHHHHHH
Q 009246 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 227 (539)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~ 227 (539)
+.||++++.+++||+|||++|+.... ..+.++||||+||||+|+++++.. ++.++++++.++..+||++||+.
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~ 235 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC---CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999999987543 256789999999999999999998 57788898888889999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHH
Q 009246 228 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRK 303 (539)
Q Consensus 228 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~---g-~d~~~~itr~~~e~~~~~~~~~ 303 (539)
|.+++.+++..+++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|++++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~ 315 (383)
T 1dkg_D 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (383)
T ss_dssp HHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHH
Confidence 99999999998888888888899999999999999999999888888876543 3 4567899999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHH
Q 009246 304 CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 304 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~ 371 (539)
+.+.++++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 999999999999988889999999999999999999999999 5677888999999999999998765
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4e-43 Score=356.12 Aligned_cols=305 Identities=25% Similarity=0.346 Sum_probs=237.6
Q ss_pred CCEEEEEcCccceeeeEE------ecceEEEecCC--c-eEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhhhccccc
Q 009246 7 GPAIGIDLGTTYSCVGVW------TTPSYVGFTDT--E-RLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKL 77 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~------~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~ 77 (539)
+.+||||||||||++++. .+||+|+|.++ + .++|++|++...++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~~~~~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~-------------------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI-------------------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTEEEEEEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE--------------------
T ss_pred CceEEEEcCcCcEEEEECCCCEEEeeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE--------------------
Confidence 458999999999999875 68999999865 3 479999998777766664321
Q ss_pred cCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCc
Q 009246 78 WPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLN 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~aGl~ 157 (539)
+|++ ++ .+ . ....++++++.++++++.. .+++ ...+|||||++|++.||+++++|++.||++
T Consensus 63 ~p~~-----~g--~i----~---~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~ 124 (344)
T 1jce_A 63 RPMR-----DG--VI----A---DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGAS 124 (344)
T ss_dssp CCEE-----TT--EE----S---SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCS
T ss_pred ecCC-----CC--ee----C---ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence 1221 11 00 0 0113566666666665542 1233 368999999999999999999999999999
Q ss_pred eeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 009246 158 VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFK 237 (539)
Q Consensus 158 ~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~ 237 (539)
.+.+++||+|||++|+.... .+.+++|||+||||||+++++... . ...++..+||++||+.|.+++.+++.
T Consensus 125 ~~~li~ep~Aaa~~~~~~~~----~~~~~lVvDiGggttdvsv~~~~~--~---~~~~~~~lGG~~id~~l~~~l~~~~~ 195 (344)
T 1jce_A 125 KVFLIEEPMAAAIGSNLNVE----EPSGNMVVDIGGGTTEVAVISLGS--I---VTWESIRIAGDEMDEAIVQYVRETYR 195 (344)
T ss_dssp EEEEEEHHHHHHHHTTCCTT----SSSCEEEEEECSSCEEEEEEETTE--E---EEEEEESCSHHHHHHHHHHHHHHHHC
T ss_pred eEeccCCHHHHHHhcCCCCC----CCceEEEEEeCCCeEEEEEEEcCC--E---EeeCCCCccChhHHHHHHHHHHHHhC
Confidence 99999999999999986543 467899999999999999998643 1 23456789999999999999987763
Q ss_pred hhccCCCCCCHHHHHHHHHHHHHHhhhcCCCce------EEEEEe--cccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q 009246 238 RKNKKDISGNPRALRRLRTACERAKRTLSSTAQ------TTIEID--SLYEGIDFYSTITRARFEELNMDLFRKCMEPVE 309 (539)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~------~~i~i~--~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~ 309 (539)
. ++. ...||++|+.|+.... ..+.++ .+.+|.+..+.|+|++|+++++|.++++.+.|+
T Consensus 196 ~----~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~ 262 (344)
T 1jce_A 196 V----AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVR 262 (344)
T ss_dssp E----ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHH
T ss_pred c----ccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 2 111 3679999999987642 234443 445777788999999999999999999999999
Q ss_pred HHHHHcCCC--cCCc-ceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 310 KCLRDAKMD--KSTV-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 310 ~~l~~~~~~--~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
++|+.++.. ...+ +.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++|..++
T Consensus 263 ~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 263 TTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999987532 1224 68999999999999999999999 46677788999999999999987544
No 11
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=4.9e-30 Score=224.85 Aligned_cols=151 Identities=57% Similarity=0.824 Sum_probs=142.5
Q ss_pred eeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcC
Q 009246 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 384 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCC
Q 009246 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWK 534 (539)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
+|+|+|++|.||+|+|+|.+..||++.+++++.....++++++++|.+.+.+|+.+++..+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999998889999999999999999999999999999999987
No 12
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=8.7e-30 Score=223.74 Aligned_cols=151 Identities=52% Similarity=0.758 Sum_probs=146.5
Q ss_pred eeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcC
Q 009246 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 384 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCC
Q 009246 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWK 534 (539)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
+|+|+|++|.||+|+|+|.+..||++..++++.....++++++++|.+.+.+|..+++..+++.++||+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999888889999999999999999999999999999999998
No 13
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=8.4e-30 Score=223.11 Aligned_cols=150 Identities=48% Similarity=0.690 Sum_probs=144.7
Q ss_pred eeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcC
Q 009246 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 384 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|||+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCC
Q 009246 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWK 534 (539)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
+|+|+|++|.||+|+|+|.+..||++..++++.. ..++++++++|.+.+.+|+.+++..+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 889999999999999999999999999999999997
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.96 E-value=2.6e-30 Score=261.00 Aligned_cols=230 Identities=17% Similarity=0.135 Sum_probs=168.6
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeEeechhHH
Q 009246 104 AAEEISSMVLIKMREIAEAYLGSTIKNAV--VTVPAYFNDSQRQATKDAGVIA--------G------LNVMRIINEPTA 167 (539)
Q Consensus 104 ~~~~v~~~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~a--------G------l~~~~li~Ep~A 167 (539)
.++....+++..|+..++...+.+ .++| ++||++|+..||+++++++..+ | +..+.+++||.|
T Consensus 96 ~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~A 174 (346)
T 2fsj_A 96 ASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVG 174 (346)
T ss_dssp TSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHH
T ss_pred cChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHH
Confidence 346667777777776542222333 4699 9999999999999999997765 4 356889999999
Q ss_pred HHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCC
Q 009246 168 AAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGN 247 (539)
Q Consensus 168 aa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~ 247 (539)
||++|. ..........+++|+|+||||||++++++.++. .+....++..+||.++++.|.+++.+++.... .+
T Consensus 175 Aa~~~l-~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~--~i--- 247 (346)
T 2fsj_A 175 AALYLL-NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV--PF--- 247 (346)
T ss_dssp HHHHHH-HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC--CH---
T ss_pred HHHHhh-ccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc--CC---
Confidence 999882 221111234689999999999999999987766 45554677899999999999998877764100 11
Q ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEE
Q 009246 248 PRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARF-EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVV 326 (539)
Q Consensus 248 ~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Vi 326 (539)
. ...+| . .. .+.+ .|. .++++++ +++++++++++.+.+++.|+++ .+.++.|+
T Consensus 248 -~-----~~~~e---~----~~--~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~Iv 301 (346)
T 2fsj_A 248 -D-----LAQEA---L----SH--PVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLI 301 (346)
T ss_dssp -H-----HHHHH---T----TS--CEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEE
T ss_pred -C-----HHHHh---c----CC--eEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEE
Confidence 0 11222 0 11 1222 343 3568999 9999999999999999999876 45689999
Q ss_pred EeCCCcCcHHHHHHHHhhhCCccc-cccCCCchhhHhHHHHHHH
Q 009246 327 LVGGSTRIPKVQQLLQDFFNGKEL-CKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 327 LvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~aVa~GAa~~a~ 369 (539)
|+||+|++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 302 L~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 302 PVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 99999999 99999999964332 1267999999999998754
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.96 E-value=3.6e-28 Score=237.84 Aligned_cols=203 Identities=21% Similarity=0.329 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeE
Q 009246 106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKN 185 (539)
Q Consensus 106 ~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~ 185 (539)
-+....+|+++++.++.+.+.....+++|+|++|...+|+.++++++.+|++...++.||+|++++|+.. .
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------~ 140 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS---------S
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC---------C
Confidence 3566788899999888888888889999999999999999999999999999999999999999988653 1
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhc
Q 009246 186 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTL 265 (539)
Q Consensus 186 vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~L 265 (539)
.+|+|+||||+|++++. .+.+. ......+||.+||+.+.+++.- -...+|++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~-------------------~~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKI-------------------PFEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTC-------------------CHHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCC-------------------CHHHHHHHHHhc
Confidence 49999999999999987 44332 3466899999999999987731 135788999887
Q ss_pred CCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 266 SSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 266 s~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
+ ++.++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5889999999999999999999988764 4779999999999999999999999
Q ss_pred CCccccccCCCchhhHhHHHHHH
Q 009246 346 NGKELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 346 ~~~~v~~~~~p~~aVa~GAa~~a 368 (539)
+.++..+.+|++++|+|||++|
T Consensus 251 -~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 -GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp -SSCCBCCSSGGGHHHHHHHTTC
T ss_pred -CCCccccCChHHHHHHHHHhcC
Confidence 6778888999999999999864
No 16
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=225.68 Aligned_cols=155 Identities=48% Similarity=0.662 Sum_probs=144.9
Q ss_pred cceeeeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCC
Q 009246 380 QDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 459 (539)
Q Consensus 380 ~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~ 459 (539)
..+.+.|++|+|||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p 97 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAP 97 (182)
T ss_dssp ------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred CCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCEEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCC
Q 009246 460 RGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKT 535 (539)
Q Consensus 460 ~~~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (539)
+|.++|+|+|++|.||+|+|+|.+.+||++..++++.. ..++++++++|.+.+.++.++++..+++.++||+||+
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~ 172 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEG 172 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 8899999999999999999999999999999998875
No 17
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.95 E-value=1.4e-28 Score=229.32 Aligned_cols=153 Identities=49% Similarity=0.730 Sum_probs=146.2
Q ss_pred eeeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCc
Q 009246 383 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 462 (539)
Q Consensus 383 ~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~ 462 (539)
++.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|||+.+.|.||||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246 463 PQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM 536 (539)
Q Consensus 463 ~~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (539)
++|+|+|++|.||+|+|+|.+.+||++..+++++.. .++++++++|.+.+.++..+++..+++.++||+||++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~-~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~ 154 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHL 154 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTC-SCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccc-cccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998764 5889999999999999999999999999999988753
No 18
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=1.8e-27 Score=210.42 Aligned_cols=151 Identities=47% Similarity=0.712 Sum_probs=145.1
Q ss_pred eeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcC
Q 009246 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (539)
Q Consensus 384 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~ 463 (539)
+.|++|+|||+++.++.|.+||+||++||++++..|++..|||+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCC
Q 009246 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWK 534 (539)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
+|+|+|++|.||+|+|++.+..+|++..++++.....++++.+++|.+.+.++..+++..+++..+||+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999998887778899999999999999999999999999999987
No 19
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.95 E-value=1.3e-27 Score=248.25 Aligned_cols=228 Identities=16% Similarity=0.150 Sum_probs=166.4
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhHHHHHh-cccccccCCCCCeEEEEEEeCCceEEEEEEEEeC
Q 009246 128 IKNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIA-YGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE 205 (539)
Q Consensus 128 ~~~~VitVPa~~~~~qr~~l~~Aa-~~aGl~~~~li~Ep~Aaa~~-~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~ 205 (539)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||.||+++ |..... ..... +.+|+|+|+||||++++. +
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~-~~~~~-~glVvDiG~gtt~v~~v~--~ 182 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQV-GERTL-TGTVIDSGDGVTHVIPVA--E 182 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTC-CSCCC-CEEEEEESSSCEEEEEEE--T
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccccc-CCCCC-eEEEEEcCCCceEEEEeE--C
Confidence 347999999999999999999998 88999999999999999987 421111 01122 569999999999999986 3
Q ss_pred CEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCc----------------
Q 009246 206 GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTA---------------- 269 (539)
Q Consensus 206 ~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~---------------- 269 (539)
+. .+....+...+||+++|+.|.+++.+++. ..... .-...+|++|+.++...
T Consensus 183 G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~~-----~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~ 251 (418)
T 1k8k_A 183 GY-VIGSCIKHIPIAGRDITYFIQQLLRDREV-----GIPPE-----QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSK 251 (418)
T ss_dssp TE-ECGGGCEEESCSHHHHHHHHHHHHHTTCC-----CCCGG-----GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGG
T ss_pred CE-EcccceEEEeCcHHHHHHHHHHHHHhcCC-----CCCCH-----HHHHHHHHHHHhhchhcccHHHHHHhhcccccc
Confidence 43 22222355789999999999999876431 11100 11245777888776432
Q ss_pred -eEEEEEecccCCeeeEEEEcHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CcCCcceEEEeCCCcCcHHH
Q 009246 270 -QTTIEIDSLYEGIDFYSTITRARF---EELNMDLF------RKCMEPVEKCLRDAKM--DKSTVHDVVLVGGSTRIPKV 337 (539)
Q Consensus 270 -~~~i~i~~~~~g~d~~~~itr~~~---e~~~~~~~------~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v 337 (539)
...+.+++...+.+..+.+++++| |.+|.|.+ ..+.+.|.+.|..+.. ....++.|+|+||+|++|.+
T Consensus 252 ~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~ 331 (418)
T 1k8k_A 252 WIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDF 331 (418)
T ss_dssp TCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTH
T ss_pred cceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccH
Confidence 135666665556677889999999 56665542 5688899999998753 34457899999999999999
Q ss_pred HHHHHhhhCC-----------------------ccccccCCCchhhHhHHHHHHHH
Q 009246 338 QQLLQDFFNG-----------------------KELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 338 ~~~l~~~f~~-----------------------~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
+++|++.+.. .++..+.+|..++.+||+++|..
T Consensus 332 ~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 332 GRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 9999875521 12334457889999999999863
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1e-27 Score=245.89 Aligned_cols=299 Identities=16% Similarity=0.185 Sum_probs=186.5
Q ss_pred CCCEEEEEcCccceeeeEEe--cceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhhhccccccCeEEE
Q 009246 6 EGPAIGIDLGTTYSCVGVWT--TPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI 83 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~--~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~~~~~~ 83 (539)
...++|||+|||+++++.+. -|.+..+... .......++....+++.+...+|+++++. . -..+ .+.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~~~g~~-~~ps~~~~~g~i~d~~~~~~~ik~~~~~~--~----~~~~----~v~ 80 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALKALASR-PTPPGLLMEGMVAEPAALAQEIKELLLEA--R----TRKR----YVV 80 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEEEEEEE-ECCTTSEETTEESCHHHHHHHHHHHHHHH--T----CCCC----EEE
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEEEEEeE-ECCCCcccCCCcCCHHHHHHHHHHHHHHc--C----CCcc----eEE
Confidence 45689999999999988761 1222111100 00000112223346677788888888641 0 0011 111
Q ss_pred ecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHH--------------------
Q 009246 84 AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQ-------------------- 143 (539)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q-------------------- 143 (539)
..-.+.......+. ...++++++... ++..++.+++.++.+++|.+|. .+.+
T Consensus 81 ~~i~~~~~~~~~~~--~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~~ 152 (377)
T 2ych_A 81 TALSNLAVILRPIQ--VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQEA 152 (377)
T ss_dssp EEECGGGCEEEEEE--EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHHH
T ss_pred EEecCCcEEEEEEE--CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHHH
Confidence 11111111111111 134677776653 3456777889999999999983 3322
Q ss_pred HHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHH
Q 009246 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 223 (539)
Q Consensus 144 r~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~ 223 (539)
.+.+++|++.|||++..++.||.|||.+|+.... ...+..++|+|+||||||+++++ .+.+ ...++..+||.+
T Consensus 153 v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~--~~~~~~~~vvDiGggttdi~i~~--~g~~---~~~~~~~~GG~~ 225 (377)
T 2ych_A 153 VAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA--EEPDRVFLVLDIGAESTSLVLLR--GDKP---LAVRVLTLSGKD 225 (377)
T ss_dssp HHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH--TSTTCEEEEEEECSSCEEEEEEE--TTEE---EEEEEESCSHHH
T ss_pred HHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc--cccCCeEEEEEECCCcEEEEEEE--CCEE---EEEEeeechHHH
Confidence 3889999999999999999999999998864332 12456799999999999999997 3433 234567899999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHH
Q 009246 224 FDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRK 303 (539)
Q Consensus 224 ~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~ 303 (539)
||+.|.+.+ +.+ ...||++|+.++.............+-......+++++|++++++.+++
T Consensus 226 i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~ 286 (377)
T 2ych_A 226 FTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVE 286 (377)
T ss_dssp HHHHHHHHT--------TCC-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHH
Confidence 999998732 111 3689999999876432211100001111133578999999999999999
Q ss_pred HHHHHHHHHHHc--CCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccc
Q 009246 304 CMEPVEKCLRDA--KMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL 350 (539)
Q Consensus 304 i~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v 350 (539)
+.+.|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+ .++
T Consensus 287 i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~-~~v 334 (377)
T 2ych_A 287 LTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNL 334 (377)
T ss_dssp HHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT-SEE
T ss_pred HHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC-CCe
Confidence 999999999953 4556679999999999999999999999994 444
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=3.3e-26 Score=235.90 Aligned_cols=198 Identities=16% Similarity=0.175 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchH
Q 009246 143 QRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 222 (539)
Q Consensus 143 qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~ 222 (539)
..+.+.+|++.|||++..++.||.|||++|+.... ++..++|+|+||||||+++++ ++.+. ..++..+||+
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~----~~~gv~vvDiGggttdisi~~--~g~~~---~~~~i~~GG~ 239 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE----KDRGVVVVNLGYNFTGLIAYK--NGVPI---KISYVPVGMK 239 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH----HHHCEEEEEECSSSEEEEEEE--TTEEE---EEEEESCCHH
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc----ccCCEEEEEECCCcEEEEEEE--CCEEE---EEEecccHHH
Confidence 45788999999999999999999999998865433 345799999999999999997 45443 3345789999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCC-----ceEEEEEecccCCeeeEEEEcHHHHHHHH
Q 009246 223 DFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST-----AQTTIEIDSLYEGIDFYSTITRARFEELN 297 (539)
Q Consensus 223 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~-----~~~~i~i~~~~~g~d~~~~itr~~~e~~~ 297 (539)
+||+.|...+.- ....||++|+.++.. ....+.++... + .....+++++|++++
T Consensus 240 ~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~-~-~~~~~is~~~l~~ii 298 (419)
T 4a2a_A 240 HVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD-G-NTIKTTTAKKLSVII 298 (419)
T ss_dssp HHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT-S-CSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC-C-ccceEEcHHHHHHHH
Confidence 999999876521 246899999998752 34567777543 2 355789999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCC------CcCCcceEEEeCCCcCcHHHHHHHHhhhCCcccc--c---------------cC
Q 009246 298 MDLFRKCMEPVEKCLRDAKM------DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELC--K---------------NI 354 (539)
Q Consensus 298 ~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~--~---------------~~ 354 (539)
+|.++++.+.|++.|+.++. ....++.|+|+||+|++|.|++.+++.|+ .++. . ..
T Consensus 299 ~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g-~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 299 HARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK-SPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT-SCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC-CCeEEEecCCCCchhccCcccccC
Confidence 99999999999999999987 34568899999999999999999999994 4332 1 14
Q ss_pred CCchhhHhHHHHHHHHH
Q 009246 355 NPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 355 ~p~~aVa~GAa~~a~~~ 371 (539)
+|..+.|.|.++++...
T Consensus 378 ~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CGGGHHHHHTTCC----
T ss_pred CchHHHHHHHHHHHhhc
Confidence 88999999999987643
No 22
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.94 E-value=1.1e-26 Score=237.76 Aligned_cols=292 Identities=17% Similarity=0.193 Sum_probs=193.6
Q ss_pred CCCEEEEEcCccceeeeEE-------ecceEEEecCC----------ceEecHHHHhhHhhCCCchhhhhhHhhCCCCCC
Q 009246 6 EGPAIGIDLGTTYSCVGVW-------TTPSYVGFTDT----------ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 68 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~-------~~Ps~v~~~~~----------~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 68 (539)
+...|+||+||++++++++ .+||+++.... ..++|++|.... .. ..++
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~~--------- 68 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTLK--------- 68 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEEE---------
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--ccee---------
Confidence 3467999999999999987 68998886532 357888876531 00 1111
Q ss_pred hhhhccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHH
Q 009246 69 ASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--IKNAVVTVPAYFNDSQRQA 146 (539)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~ 146 (539)
+|++ + +. +.--+....+++++.. +.++.. ...++||+|++++..+|++
T Consensus 69 ---------~Pi~-----~------------G~-i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~ 118 (375)
T 2fxu_A 69 ---------YPIE-----H------------GI-ITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREK 118 (375)
T ss_dssp ---------CSEE-----T------------TE-ECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHH
T ss_pred ---------cccc-----C------------Cc-ccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHH
Confidence 1211 0 00 0111223333444331 223322 2359999999999999998
Q ss_pred HHHH-HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHH
Q 009246 147 TKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 225 (539)
Q Consensus 147 l~~A-a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 225 (539)
+.++ ++.+|++.+.+++||.|||++++. .+.+|+|+|+||||++.+. +|. .+....+...+||+++|
T Consensus 119 ~~e~~fe~~g~~~~~~~~e~~aaa~a~g~---------~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG~~lt 186 (375)
T 2fxu_A 119 MTQIMFETFNVPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAGRDLT 186 (375)
T ss_dssp HHHHHHHTTCCSEEEEEEHHHHHHHHTTC---------SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCHHHHH
T ss_pred HHHHHHHhcCcceEEEccchheeeeecCC---------CeEEEEEcCCCceEEeEeE--CCE-EeccceEEeccCHHHHH
Confidence 8876 588899999999999999999874 2469999999999998774 442 22222345789999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcC----------------CCceEEEEEecccCCeeeEEEEc
Q 009246 226 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLS----------------STAQTTIEIDSLYEGIDFYSTIT 289 (539)
Q Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls----------------~~~~~~i~i~~~~~g~d~~~~it 289 (539)
+.|.+++..+. ..+.. . .-...+|++|+.++ ......+.++ +|. .+.++
T Consensus 187 ~~l~~~l~~~~-----~~~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~--~i~i~ 251 (375)
T 2fxu_A 187 DYLMKILTERG-----YSFVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ--VITIG 251 (375)
T ss_dssp HHHHHHHHHHT-----CCCCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--EEEES
T ss_pred HHHHHHHHhcC-----CCCCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC--EEEEC
Confidence 99999997651 11111 0 01123444444432 2233444443 343 35788
Q ss_pred HHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--CcCCcceEEEeCCCcCcHHHHHHHHhhhCC-------ccccc
Q 009246 290 RARF---EELNMDL-----FRKCMEPVEKCLRDAKM--DKSTVHDVVLVGGSTRIPKVQQLLQDFFNG-------KELCK 352 (539)
Q Consensus 290 r~~~---e~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-------~~v~~ 352 (539)
++.| |.+++|. ...+.+.|.+.|..+.. ....++.|+|+||+|++|.++++|++.+.. .++..
T Consensus 252 ~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~ 331 (375)
T 2fxu_A 252 NERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 331 (375)
T ss_dssp THHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEEC
T ss_pred hhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEc
Confidence 8877 4455553 24577888888886632 233467899999999999999999987731 34556
Q ss_pred cCCCchhhHhHHHHHHH
Q 009246 353 NINPDEAVAYGAAVQAA 369 (539)
Q Consensus 353 ~~~p~~aVa~GAa~~a~ 369 (539)
+.+|..++++||+++|.
T Consensus 332 ~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 332 PPERKYSVWIGGSILAS 348 (375)
T ss_dssp CTTTTSHHHHHHHHHHH
T ss_pred CCCCCccEEcchHHhhC
Confidence 67999999999999987
No 23
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.92 E-value=1.1e-25 Score=211.93 Aligned_cols=151 Identities=36% Similarity=0.553 Sum_probs=143.7
Q ss_pred eeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCE
Q 009246 385 LDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ 464 (539)
Q Consensus 385 ~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~ 464 (539)
.|++|+|+|+++.++.|.+||+||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246 465 ITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM 536 (539)
Q Consensus 465 i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (539)
|+|+|++|.||+|+|++.+..||++..++++... .++++.+++|.+.+..+..+++..+++..+||+||++
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~-~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~ 151 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSY-GLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARV 151 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCS-CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEecc-CCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998774 4888999999999999999999999999999998863
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.90 E-value=1.3e-23 Score=180.56 Aligned_cols=119 Identities=59% Similarity=0.892 Sum_probs=108.7
Q ss_pred ccceeeeeccccccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCC
Q 009246 379 VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 458 (539)
Q Consensus 379 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~ 458 (539)
.+++.+.|++|++||+++.++.|.+||+||+++|++++.+|++..|||+.+.|.+|||++..+.+|..||+|.|.++|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEEEEecCCeeEEEEEEEcCCCceeeEEcCCC
Q 009246 459 PRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTT 497 (539)
Q Consensus 459 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~~~~ 497 (539)
|+|.++|+|+|++|.||+|+|+|.+..||++.+++++..
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999998764
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.89 E-value=3.9e-24 Score=213.94 Aligned_cols=228 Identities=16% Similarity=0.188 Sum_probs=149.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeEeec
Q 009246 101 KQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAY-FNDS--QR--QATKDA------------GVIAGLNVMRIIN 163 (539)
Q Consensus 101 ~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~aGl~~~~li~ 163 (539)
..+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 346677776653 44443 211 1222 3699999987 6541 22 222221 2344567789999
Q ss_pred hhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCC
Q 009246 164 EPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKD 243 (539)
Q Consensus 164 Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~ 243 (539)
||.||+++|.... .++..++|+|+||||+|+++++ ++.+.+....++..+||.+||+.|.+++.++ +.+
T Consensus 148 e~~aa~~~~~~~~----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~ 216 (320)
T 2zgy_A 148 ESIPAGYEVLQEL----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTK 216 (320)
T ss_dssp SSHHHHHHHHHHS----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBG
T ss_pred CcHHHHHhhhccc----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCC
Confidence 9999999886322 2467899999999999999998 4444556667778999999999999988542 222
Q ss_pred CCCCHHHHHHHHHHHHHH-hhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCc
Q 009246 244 ISGNPRALRRLRTACERA-KRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTV 322 (539)
Q Consensus 244 ~~~~~~~~~~l~~~~e~~-K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 322 (539)
+ +. ..+|++ |..- . . .+........-..+++.+++++.++++.+.|.+.+++. .++
T Consensus 217 i--~~-------~~ae~~lk~~~-~--------~-~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~ 273 (320)
T 2zgy_A 217 G--SS-------YLADDIIIHRK-D--------N-NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGY 273 (320)
T ss_dssp G--GH-------HHHHHHHHTTT-C--------H-HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCC
T ss_pred C--CH-------HHHHHHHHHhh-h--------h-hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCC
Confidence 1 11 234444 3320 0 0 00000000001345666777777777777777777652 468
Q ss_pred ceEEEeCCCcCcHHHHHHHHhhhCCc--cccccCCCchhhHhHHHHHH
Q 009246 323 HDVVLVGGSTRIPKVQQLLQDFFNGK--ELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 323 ~~ViLvGG~s~~p~v~~~l~~~f~~~--~v~~~~~p~~aVa~GAa~~a 368 (539)
+.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 274 ~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 274 THVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999999997 999999999643 46678899999999999875
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.84 E-value=3.4e-22 Score=205.37 Aligned_cols=214 Identities=18% Similarity=0.189 Sum_probs=90.3
Q ss_pred cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEE
Q 009246 130 NAVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIF 208 (539)
Q Consensus 130 ~~VitVPa~~~~~qr~~l~~A-a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~ 208 (539)
.+++|+|+.++..+|+++.++ ++.+|++.+.+++||.||+++++.. +.+|+|+|+|||+++.+. +|..
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~---------~~lVVDiG~g~T~v~pv~--~G~~ 174 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL---------TGVVVDSGDGVTHICPVY--EGFS 174 (394)
T ss_dssp ---------------------------------------------------------CCEEEECSSCEEEECEE--TTEE
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc---------eEEEEEcCCCceEeeeeE--CCEE
Confidence 589999999999999999885 5888999999999999999988642 359999999999998775 3332
Q ss_pred EEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCc----------------eEE
Q 009246 209 EVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTA----------------QTT 272 (539)
Q Consensus 209 ~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~----------------~~~ 272 (539)
+........+||+++|+.|.+++.++. +......+. ..+|++|+.++... ...
T Consensus 175 -~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~ 243 (394)
T 1k8k_B 175 -LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVES 243 (394)
T ss_dssp -CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred -cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceE
Confidence 111123468999999999999987641 111111122 33455555543321 122
Q ss_pred EEEecccCCeeeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCcceEEEeCCCcCcHHHHHHHH
Q 009246 273 IEIDSLYEGIDFYSTITRARFE---ELNMDL-----FRKCMEPVEKCLRDAKMD--KSTVHDVVLVGGSTRIPKVQQLLQ 342 (539)
Q Consensus 273 i~i~~~~~g~d~~~~itr~~~e---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~ 342 (539)
+.++ +|. .+.|+.+.|+ .+++|. ...+.+.|.+.|..+..+ ..-.+.|+|+||+|.+|.+.++|+
T Consensus 244 ~~lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~ 318 (394)
T 1k8k_B 244 YTLP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLE 318 (394)
T ss_dssp EECT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHH
T ss_pred EECC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHH
Confidence 3332 343 3567777773 334442 245778888888887533 334678999999999999999998
Q ss_pred hhhCC------------------ccccccCCCchhhHhHHHHHHHH
Q 009246 343 DFFNG------------------KELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 343 ~~f~~------------------~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
+.+.. ..+..+.+|..++.+|++++|..
T Consensus 319 ~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 319 RELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 76621 12333567889999999998763
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.81 E-value=7.7e-20 Score=184.34 Aligned_cols=205 Identities=14% Similarity=0.208 Sum_probs=138.1
Q ss_pred cEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeEeechhHHHHHhcccccccC--CCCCeEEEEEEeCCc
Q 009246 130 NAVVTVPAYFNDSQR-QATKDAGVIAGL------------NVMRIINEPTAAAIAYGLDKKAT--SVGEKNVLIFDLGGG 194 (539)
Q Consensus 130 ~~VitVPa~~~~~qr-~~l~~Aa~~aGl------------~~~~li~Ep~Aaa~~~~~~~~~~--~~~~~~vlV~D~Ggg 194 (539)
.+++++|..+...+| +++++++..++- ..+.+++||.||++++....... ...+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 689999999998887 589998875542 56889999999999987644210 003678999999999
Q ss_pred eEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEE
Q 009246 195 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIE 274 (539)
Q Consensus 195 T~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~ 274 (539)
|+|++++. ++.+. ....+...+||..+++++.+++.+++. +..+. . ...++.+. + .
T Consensus 195 Ttd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~--------~ 250 (355)
T 3js6_A 195 TTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-Y--------K 250 (355)
T ss_dssp CEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-----------
T ss_pred cEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-c--------c
Confidence 99999993 43321 112334679999999999999977642 11111 1 11121111 0 0
Q ss_pred EecccCCee--eEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHH--HHHHHHhhhCCccc
Q 009246 275 IDSLYEGID--FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPK--VQQLLQDFFNGKEL 350 (539)
Q Consensus 275 i~~~~~g~d--~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~~f~~~~v 350 (539)
..+.+ -...+ .+.+++.++++++++.+.|++.+.+ ++.++.|+|+||++.++. |.+.|++.|+..
T Consensus 251 ----~~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-- 319 (355)
T 3js6_A 251 ----QCKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-- 319 (355)
T ss_dssp ---------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC--
T ss_pred ----cccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC--
Confidence 00000 01122 2346667777777777777777653 456789999999999998 889999988532
Q ss_pred cccCCCchhhHhHHHHHHHHHh
Q 009246 351 CKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 351 ~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
.||.+|+|+|+..++..+.
T Consensus 320 ---~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHH
Confidence 7999999999999988765
No 28
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=6.1e-19 Score=172.47 Aligned_cols=216 Identities=19% Similarity=0.185 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeE
Q 009246 106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKN 185 (539)
Q Consensus 106 ~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~ 185 (539)
.++++.+|+.+++.+ +....++......... ..++......|+||+|+++++..... ..
T Consensus 36 ~e~a~~vl~~~~~~a----~~~~~~~~~~a~t~~~-----------~~a~~~~~~~Vne~~aha~a~~~~~~------~~ 94 (276)
T 4ehu_A 36 TTGPSRVLEKLYGKT----GLAREDIKKVVVTGYG-----------RMNYSDADKQISELSCHARGVNFIIP------ET 94 (276)
T ss_dssp SSHHHHHHHHHHHHH----CCCGGGEEEEEEESTT-----------GGGCCSCSEECCHHHHHHHHHHHHST------TC
T ss_pred HHHHHHHHHHHHHHC----CCcchhccccccCchH-----------HHHhhCCCcccchHHHHHHHHHHhCC------CC
Confidence 345666777776655 3333333222222221 23566778999999999988765433 23
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhh-
Q 009246 186 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRT- 264 (539)
Q Consensus 186 vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~- 264 (539)
..|+|+|||+++++++. .++.++.....+....|+.+|++.+++++...+..... + +..++..
T Consensus 95 ~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~~------------~---~~~a~~~~ 158 (276)
T 4ehu_A 95 RTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELGS------------I---SMNSQNEV 158 (276)
T ss_dssp CEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHHH------------H---HTTCSSCC
T ss_pred CeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhHH------------H---HhcCCCCC
Confidence 47899999999999885 46778888888989999999999999888544332110 0 0011100
Q ss_pred -cCCCceEEEE---EecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHH
Q 009246 265 -LSSTAQTTIE---IDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQL 340 (539)
Q Consensus 265 -Ls~~~~~~i~---i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~ 340 (539)
+++....... +.....+ ...++++..+.+.+.+.+.....+. ..++.|+|+||.+++|.|++.
T Consensus 159 ~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~ 225 (276)
T 4ehu_A 159 SISSTCTVFAESEVISHLSEN---------AKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRA 225 (276)
T ss_dssp CCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHH
T ss_pred CcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHH
Confidence 0000000000 0000011 1134556666666655555544443 356789999999999999999
Q ss_pred HHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 341 LQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 341 l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
+++.| +.++..+.+|++++|+|||++|....
T Consensus 226 l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 226 MAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 99999 67888999999999999999997654
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.74 E-value=8.6e-19 Score=175.28 Aligned_cols=204 Identities=14% Similarity=0.171 Sum_probs=140.0
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeEeechhHHHHHhcccccccCCCCCeEEEEEEeC
Q 009246 129 KNAVVTVPAYFND--SQRQATKDAGVIA--------G------LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLG 192 (539)
Q Consensus 129 ~~~VitVPa~~~~--~qr~~l~~Aa~~a--------G------l~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~G 192 (539)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. . ..++..++|+|+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~----~~~~~~v~vvDiG 180 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E----NFKNKNVAVIDFG 180 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C----CCTTCEEEEEEEC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h----hhccCCEEEEEeC
Confidence 3789999988775 3688887766521 1 134678889988887652 1 1256789999999
Q ss_pred CceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHH-HHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceE
Q 009246 193 GGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQ-EFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQT 271 (539)
Q Consensus 193 ggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~ 271 (539)
|||+|++++. ++.+ +....+...+||.++++.+.+++.+ ++ +..+.. ..+|++|+. .. .
T Consensus 181 ggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~----g~~i~~---------~~~e~i~~~--g~--~ 240 (329)
T 4apw_A 181 GLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNN----GNLITN---------EQAESALNN--GY--M 240 (329)
T ss_dssp SSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSS----CSCTTS---------BTTTTCSSS--CS--S
T ss_pred CCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhcc----CCCCCH---------HHHHHHHhc--CC--c
Confidence 9999999998 3332 2222345679999999999988765 33 322221 133444443 11 0
Q ss_pred EEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCcccc
Q 009246 272 TIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELC 351 (539)
Q Consensus 272 ~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~ 351 (539)
..+.+. ..+..+++++.++++++++.+.+++. +..+..++.|+|+||++.+ +.+.|++.|+ .++.
T Consensus 241 -------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~ 305 (329)
T 4apw_A 241 -------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSI 305 (329)
T ss_dssp -------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEE
T ss_pred -------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCE
Confidence 001111 13456777777777777777777765 3444558999999999998 6799999995 3466
Q ss_pred ccCCCchhhHhHHHHHHHHHh
Q 009246 352 KNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 352 ~~~~p~~aVa~GAa~~a~~~~ 372 (539)
...||..|+|+|+..++....
T Consensus 306 v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 306 ITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp CCSSGGGHHHHHHHHHHHHHH
T ss_pred ecCCChhhHHHHHHHHHhhhh
Confidence 778999999999998876544
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.9e-15 Score=157.23 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=116.1
Q ss_pred CCCCCEEEEEcCccceeeeEE-------ecceEEEecCC----ceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChhhh
Q 009246 4 KGEGPAIGIDLGTTYSCVGVW-------TTPSYVGFTDT----ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQ 72 (539)
Q Consensus 4 ~~~~~vvGID~GTt~s~va~~-------~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 72 (539)
......|+||+||.++++++. .+||+|+.... ..++|+++... .+.+ ..
T Consensus 20 gde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~---~r~~--l~--------------- 79 (498)
T 3qb0_A 20 GDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGI---PRKD--YE--------------- 79 (498)
T ss_dssp CCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCSSCCEECCTTGGGS---CCTT--EE---------------
T ss_pred CCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCCCccEEEecHHHhc---CcCc--eE---------------
Confidence 345567999999999999887 68999998542 35777753221 0000 00
Q ss_pred ccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCC--CC-cEEEEeCCCCCHHHHHHHHH
Q 009246 73 GDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--IK-NAVVTVPAYFNDSQRQATKD 149 (539)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~-~~VitVPa~~~~~qr~~l~~ 149 (539)
-.+|++ + ..+.-=+.+..+++|+.. ..++.. -. .+++|.|.......|+.+.+
T Consensus 80 ---l~~Pi~-----~-------------GvI~dwd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~e 135 (498)
T 3qb0_A 80 ---LKPIIE-----N-------------GLVIDWDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLE 135 (498)
T ss_dssp ---EEESEE-----T-------------TEESCHHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHH
T ss_pred ---EeccCc-----C-------------CEEccHHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHH
Confidence 011221 0 011112334444444432 223322 22 58999999999999999988
Q ss_pred H-HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHH
Q 009246 150 A-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 228 (539)
Q Consensus 150 A-a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 228 (539)
+ ++..|++.+.++.+|.+|+++++.. +-||+|+|+|+|+++.+. +|.. +........+||+++|+.|
T Consensus 136 ilFE~f~vpav~l~~~~vlalya~G~~---------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 136 VLLEGMQFEACYLAPTSTCVSFAAGRP---------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp HHHTTSCCSEEEEEEHHHHHHHHHTCS---------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHH
T ss_pred HHHhhcCCCeEeecchHHHHHHHcCCC---------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHH
Confidence 6 5889999999999999999888652 139999999999999986 3321 1111122579999999999
Q ss_pred HHHHHH
Q 009246 229 VNHFVQ 234 (539)
Q Consensus 229 ~~~l~~ 234 (539)
.++|.+
T Consensus 204 ~~lL~~ 209 (498)
T 3qb0_A 204 KKALEP 209 (498)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 999864
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.64 E-value=1.7e-16 Score=163.58 Aligned_cols=224 Identities=18% Similarity=0.161 Sum_probs=142.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCE
Q 009246 129 KNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 207 (539)
Q Consensus 129 ~~~VitVPa~~~~~qr~~l~~Aa-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~ 207 (539)
..+++|.|+......|+.+.+.+ +..|++.+.++.+|.+|+++.+..... .....+-||+|+|+|+|+++.+. +|.
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~-~~~~~tglVVDiG~g~T~v~PV~--~G~ 200 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV-TDRSLTGTVVDSGDGVTHIIPVA--EGY 200 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT-CSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc-cCCCceEEEEECCCCceEEEEEE--CCE
Confidence 36899999999999999998877 789999999999999999987743210 01123569999999999999984 232
Q ss_pred EEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceE-----------EEEEe
Q 009246 208 FEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQT-----------TIEID 276 (539)
Q Consensus 208 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~-----------~i~i~ 276 (539)
. +........+||+++|+.|.+++.++... . .=...+|.+|+.++.-... ...+.
T Consensus 201 ~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~-------~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~ 266 (427)
T 3dwl_A 201 V-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------D-------SSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYL 266 (427)
T ss_dssp E-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----C
T ss_pred E-ehhhheeccccHHHHHHHHHHHHHHcCCC------c-------hhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccc
Confidence 1 11111225799999999999988665431 0 0113455566655432100 00011
Q ss_pred c--c--cCCeeeEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--cCCcceEEEeCCCcCcHHHHHHH
Q 009246 277 S--L--YEGIDFYSTITRARF---EELNMDL------FRKCMEPVEKCLRDAKMD--KSTVHDVVLVGGSTRIPKVQQLL 341 (539)
Q Consensus 277 ~--~--~~g~d~~~~itr~~~---e~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l 341 (539)
. + .+|....+.+..++| |-++.|- ...+.+.|.+.|.++..+ ..-.+.|+|+||+|.+|.+.++|
T Consensus 267 ~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL 346 (427)
T 3dwl_A 267 KYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRL 346 (427)
T ss_dssp CBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHH
T ss_pred eeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHH
Confidence 0 1 234434566777776 3444442 235778888888876532 12256799999999999999999
Q ss_pred Hhhh----C---------------C--ccccccCCCchhhHhHHHHHHH
Q 009246 342 QDFF----N---------------G--KELCKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 342 ~~~f----~---------------~--~~v~~~~~p~~aVa~GAa~~a~ 369 (539)
++.+ + . .++..+.++..++=+|++++|.
T Consensus 347 ~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 347 QRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 8754 1 1 1234445677899999999975
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.39 E-value=1.5e-11 Score=133.08 Aligned_cols=118 Identities=17% Similarity=0.261 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCCc-----EEEEeCCCCCHHHHHHHHHH-HHHcCCceeEeechhHHHHHhcccccc
Q 009246 105 AEEISSMVLIKMREIA-EAYLGSTIKN-----AVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKK 177 (539)
Q Consensus 105 ~~~v~~~~L~~l~~~a-~~~~~~~~~~-----~VitVPa~~~~~qr~~l~~A-a~~aGl~~~~li~Ep~Aaa~~~~~~~~ 177 (539)
..+.+.++ ..|.+++ ...++....+ +++|.|..++...|+.|.+. ++..|++.+.++.++.+|+++++..
T Consensus 170 ~~~~wdd~-e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLADI-EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHHH-HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHHH-HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 45555553 3444444 3566654443 99999999999999998664 6778999999999999999988654
Q ss_pred cCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHH
Q 009246 178 ATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQE 235 (539)
Q Consensus 178 ~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~ 235 (539)
+-+|+|+|.+.|.|+-+. +|.. +........+||+++++.|.++|..+
T Consensus 247 -------tglVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 -------STCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -------EEEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -------ceEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 349999999999999886 2211 11112234799999999999888654
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.31 E-value=1.5e-11 Score=125.01 Aligned_cols=197 Identities=21% Similarity=0.211 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHc-CC--ceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q 009246 141 DSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 217 (539)
Q Consensus 141 ~~qr~~l~~Aa~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~ 217 (539)
..+-+.+.+|.+.+ |+ ++-. .||.||+++.+.+.. .+..+.++|+||||||++++.-.. +.+....
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE----~eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~i 435 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG----TTRPLAILDLGAGSTDASIINPKG-----DIIATHL 435 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECTTC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEe
Confidence 34567888899999 99 6556 999999999887665 566799999999999999998554 3334446
Q ss_pred CCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCC----------ceEEEEE--eccc----CC
Q 009246 218 HLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST----------AQTTIEI--DSLY----EG 281 (539)
Q Consensus 218 ~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~----------~~~~i~i--~~~~----~g 281 (539)
..||++++..|..-|.-. + +..||++|+ .... ....+.+ +.+. .-
T Consensus 436 p~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 799999999988766321 0 257888888 4321 1123444 2221 11
Q ss_pred -----eeeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCcceEEEeCCCcCcHHHHHHHHhhhCC
Q 009246 282 -----IDFYSTITRAR--FEELNMDLFRKCMEP--VEKCLRDAKM-----DKSTVHDVVLVGGSTRIPKVQQLLQDFFNG 347 (539)
Q Consensus 282 -----~d~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 347 (539)
.+.-..| +.+ +|+ ++-+-+++.+. +...|+..+. ...+|..|+|+||+|.++.+.+..++.|..
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0112355 566 777 66555555543 3333555432 245679999999999999999999999954
Q ss_pred ccc-------cccCCCchhhHhHHHHHHH
Q 009246 348 KEL-------CKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 348 ~~v-------~~~~~p~~aVa~GAa~~a~ 369 (539)
-++ .....|..|+|.|.++|.+
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 121 2245899999999998864
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.29 E-value=1.4e-11 Score=125.74 Aligned_cols=194 Identities=22% Similarity=0.195 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHc-CC--ceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCC
Q 009246 143 QRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL 219 (539)
Q Consensus 143 qr~~l~~Aa~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~l 219 (539)
+-+.+.+|.+.+ |+ ++-. .||.||+++.+.+.. .+..+.++|+||||||++++.-.. +.+......
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE----~elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~ip~ 439 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG----CAAPLAILDLGAGSTDAAIVNAEG-----QITAVHLAG 439 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECSSS-----CEEEEEEEC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEecc
Confidence 345677888888 99 5555 999999999887665 566799999999999999998555 334444679
Q ss_pred chHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCC----------ceEEEEE--ecccC---Ce--
Q 009246 220 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST----------AQTTIEI--DSLYE---GI-- 282 (539)
Q Consensus 220 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~----------~~~~i~i--~~~~~---g~-- 282 (539)
||++++..|..-|.-. + +..||++|+ .... ....+.+ +.+.. ..
T Consensus 440 gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 9999999988766321 0 257888888 4321 1123444 22211 01
Q ss_pred ----eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCcceEEEeCCCcCcHHHHHHHHhhhCCcc
Q 009246 283 ----DFYSTITRAR--FEELNMDLFRKCMEP--VEKCLRDAKMD-----KSTVHDVVLVGGSTRIPKVQQLLQDFFNGKE 349 (539)
Q Consensus 283 ----d~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 349 (539)
+.-..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.+..++.|..-+
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 122355 566 777 66555555553 45557776543 3457899999999999999999999995312
Q ss_pred -------ccccCCCchhhHhHHHHHH
Q 009246 350 -------LCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 350 -------v~~~~~p~~aVa~GAa~~a 368 (539)
......|..|+|.|.++|.
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 1224589999999999874
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.93 E-value=4e-08 Score=94.88 Aligned_cols=173 Identities=18% Similarity=0.217 Sum_probs=99.3
Q ss_pred eeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 009246 158 VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFK 237 (539)
Q Consensus 158 ~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~ 237 (539)
...+++|++|.+.+...... ..+ .|+|+||+++.+..+ .++.+.-......+..|+-.|-+.+.. .+.
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~----~~~--~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~le~~a~----~lg 143 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWP----NVH--TVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFLDVMAN----ILE 143 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCT----TCC--EEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHHHHHHH----HHT
T ss_pred CCCCcccHHHHHHHHHHhCC----CCC--EEEEECCCceEEEEE--eCCceeeeccccccchhhHHHHHHHHH----HhC
Confidence 34679999999854422111 112 589999998888777 566554334444444444444444443 332
Q ss_pred hhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHH----------HHHHHHHHHHHHHH
Q 009246 238 RKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARF----------EELNMDLFRKCMEP 307 (539)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~----------e~~~~~~~~~i~~~ 307 (539)
.+.. .+-+.+.+.+.-+.....+. .+.+.++ ++++..+++.+...
T Consensus 144 ----~~~~-------el~~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~~ 198 (270)
T 1hux_A 144 ----VKVS-------DLAELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVASR 198 (270)
T ss_dssp ----CCTT-------THHHHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ----CCHH-------HHHHHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 2211 11111111111000000000 1112222 44455555555555
Q ss_pred HHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 308 VEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 308 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
+.+.++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+|+.+.|+|||++|....
T Consensus 199 i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 199 VIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 5555543321 367999999999999999999999 67787888888899999999987643
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.46 E-value=5e-06 Score=80.03 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=41.3
Q ss_pred cceEEEeCC-CcCcHHHHHHHHhhh--CCccccccCCCchhhHhHHHHHH
Q 009246 322 VHDVVLVGG-STRIPKVQQLLQDFF--NGKELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 322 i~~ViLvGG-~s~~p~v~~~l~~~f--~~~~v~~~~~p~~aVa~GAa~~a 368 (539)
++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|..+.|.|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 457999999 899999999999874 46788889999999999999863
No 37
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.17 E-value=4.2e-06 Score=88.17 Aligned_cols=96 Identities=18% Similarity=0.308 Sum_probs=76.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCE
Q 009246 129 KNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 207 (539)
Q Consensus 129 ~~~VitVPa~~~~~qr~~l~~Aa-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~ 207 (539)
..+++|.|..+....|+.|.+.+ +..|++.+.++.+|.+|+++++. ..+-||+|+|+|+|+++.+. +|.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl--------~ttGLVVDiG~g~T~VvPV~--eG~ 291 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI--------STSTCVVNIGAAETRIACVD--EGT 291 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------SSCEEEEEECSSCEEEEEEE--TTE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------CCceEEEcCCCceEEEEEEe--CCE
Confidence 36899999999999999998876 56899999999999999988764 12359999999999999985 331
Q ss_pred EEEEEecCCCCCchHHHHHHHHHHHHHH
Q 009246 208 FEVKATAGDTHLGGEDFDNRMVNHFVQE 235 (539)
Q Consensus 208 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~ 235 (539)
-+........+||+++++.|.++|.++
T Consensus 292 -vl~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 292 -VLEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp -ECGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -EEhhheeeecchHHHHHHHHHHHHHHc
Confidence 111111235899999999999998764
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.63 E-value=0.0014 Score=64.69 Aligned_cols=70 Identities=16% Similarity=0.056 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCcCCcceEEEeCC-CcCcHHHHHHHHhhh-----CCccccccCCCchhhHhH
Q 009246 294 EELNMDLFRKCMEPVEKCL----RDAKMDKSTVHDVVLVGG-STRIPKVQQLLQDFF-----NGKELCKNINPDEAVAYG 363 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~ViLvGG-~s~~p~v~~~l~~~f-----~~~~v~~~~~p~~aVa~G 363 (539)
|+++..++..+.+.|-... +..+ ++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|.|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4455555555555444332 3333 446999999 999999999999986 346777888999999999
Q ss_pred HHHHH
Q 009246 364 AAVQA 368 (539)
Q Consensus 364 Aa~~a 368 (539)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 39
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.23 E-value=0.00076 Score=66.09 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchH
Q 009246 143 QRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 222 (539)
Q Consensus 143 qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~ 222 (539)
+...+.++-+..|++...+-.|.+|...+.+...... .....+|+|+|||+|.+++.+ ++.+. ...+.++|+.
T Consensus 99 ~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~~G~v 171 (315)
T 1t6c_A 99 AEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--PEGEVCVVDQGGGSTEYVFGK--GYKVR---EVISLPIGIV 171 (315)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--CCSEEEEEEEETTEEEEEEEE--TTEEE---EEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--cCCCEEEEEeCCCcEEEEEEe--CCcee---eEEEEeccHH
Confidence 4455566666789998777777777765554433321 245689999999999999976 44332 2233689999
Q ss_pred HHHHHHH
Q 009246 223 DFDNRMV 229 (539)
Q Consensus 223 ~~d~~l~ 229 (539)
.+.+.+.
T Consensus 172 ~l~e~~~ 178 (315)
T 1t6c_A 172 NLTETFF 178 (315)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8887753
No 40
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.03 E-value=0.016 Score=56.59 Aligned_cols=80 Identities=16% Similarity=0.234 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchH
Q 009246 143 QRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 222 (539)
Q Consensus 143 qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~ 222 (539)
+...+.++-+..|++.-.+-.|-+|...+.+....... .+...+|+|+|||+|.+++++ ++.+. .....++|..
T Consensus 91 ~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~-~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG~v 164 (315)
T 3mdq_A 91 KQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPM-EDHISLAMDIGGGSVEFIIGN--KNEIL---WKQSFEIGGQ 164 (315)
T ss_dssp HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCC-TTCCEEEEEECSSCEEEEEEC--SSCEE---EEEEESCCHH
T ss_pred HHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCC-CCCCEEEEEeCCCceEEEEEE--CCeEe---eeEEEechhh
Confidence 34555666667899876555666665444443322111 235689999999999999997 33222 2223578887
Q ss_pred HHHHHH
Q 009246 223 DFDNRM 228 (539)
Q Consensus 223 ~~d~~l 228 (539)
.+.+.+
T Consensus 165 rl~e~f 170 (315)
T 3mdq_A 165 RLIDRF 170 (315)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 776654
No 41
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.00 E-value=0.27 Score=48.09 Aligned_cols=89 Identities=15% Similarity=0.188 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCH----------------HHHHHHHHHHHHcCCceeEeechhHHH
Q 009246 105 AEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFND----------------SQRQATKDAGVIAGLNVMRIINEPTAA 168 (539)
Q Consensus 105 ~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~----------------~qr~~l~~Aa~~aGl~~~~li~Ep~Aa 168 (539)
++++...+...+.+..... + .+..+.|++|...+. .-++.+.+. .|++ +.+.|+..||
T Consensus 60 ~~~~~~~i~~~i~~~~~~~-~-~~~gigi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~---~~~p-V~v~NDa~aa 133 (327)
T 4db3_A 60 YPLLLETIAGLVAKYDQEF-A-CEGKIGLGLPGMEDADDATVLTVNVPAAKGKPLRADLEAK---IGRS-VKIENDANCF 133 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESEEECTTTCCEEESSSGGGTTSCHHHHHHHH---HSSC-CEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeccEeCCCCEEEcCCCccccCCCHHHHHHHH---HCCC-EEEecchhHH
Confidence 4555555554444433322 2 245667777754431 123444443 3776 7899999999
Q ss_pred HHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 169 AIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 169 a~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
|++-..... ....++++++-+|.| +-.+++.
T Consensus 134 algE~~~g~--~~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 134 ALSEAWDEE--LQDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp HHHHHTSTT--TTTCSEEEEEEESSS-EEEEEEE
T ss_pred HHHHHHhCC--CCCCCcEEEEEeCcc-ceEEEEE
Confidence 986533221 123467888888887 5555553
No 42
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.00 E-value=0.046 Score=53.52 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeEeechhHHH
Q 009246 105 AEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDS----------------QRQATKDAGVIAGLNVMRIINEPTAA 168 (539)
Q Consensus 105 ~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~----------------qr~~l~~Aa~~aGl~~~~li~Ep~Aa 168 (539)
+++++..+...+.+.... .++..+.|++|...+.. -++.+.+. .|++ +.+.|+..||
T Consensus 37 ~~~~~~~i~~~i~~~~~~---~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-v~v~NDa~aa 109 (321)
T 3vgl_A 37 AEGIVDAICAAVAGASEG---HDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQR---VGLP-VVVENDANAA 109 (321)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHH---HCSC-EEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh---cCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhh---hCCC-EEEEehhhhH
Confidence 455555544444443221 24556777777654322 23444443 3776 7899999999
Q ss_pred HHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 169 AIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 169 a~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
|++-..... ....++++++-+|.| +-..++.
T Consensus 110 al~E~~~g~--~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 110 AWGEYRFGA--GQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HHHHHHHST--TTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHHHHHhCC--CCCCCCEEEEEeCcc-eEEEEEE
Confidence 986432211 123456888889988 6666654
No 43
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.81 E-value=0.032 Score=54.70 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=33.3
Q ss_pred cceEEEeCCCcCc-HHHHHHHHhhh---------CCccccccCCCchhhHhHHHHHHH
Q 009246 322 VHDVVLVGGSTRI-PKVQQLLQDFF---------NGKELCKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 322 i~~ViLvGG~s~~-p~v~~~l~~~f---------~~~~v~~~~~p~~aVa~GAa~~a~ 369 (539)
.+.|+|.||.++. +.+.+.|++.+ ...++....-.+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4689999998886 66666655543 123455555667899999998763
No 44
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.76 E-value=0.49 Score=46.55 Aligned_cols=84 Identities=4% Similarity=-0.026 Sum_probs=51.7
Q ss_pred eHHHHHHHHHHHHHHHHHHH-h-CC-CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeEeechhHHHHHhcccccc
Q 009246 104 AAEEISSMVLIKMREIAEAY-L-GS-TIKNAVVTVPAYFNDSQRQATKDAGVIA-G--LNVMRIINEPTAAAIAYGLDKK 177 (539)
Q Consensus 104 ~~~~v~~~~L~~l~~~a~~~-~-~~-~~~~~VitVPa~~~~~qr~~l~~Aa~~a-G--l~~~~li~Ep~Aaa~~~~~~~~ 177 (539)
.+++++..+...+.+..+.. . .. ++..+.|++|...+......+++..+.. + .-.+.+.|+..|||+++ . .
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~ 120 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P 120 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C
Confidence 34555555555555544332 1 12 5678999999998877665666655543 3 13578999999999883 2 1
Q ss_pred cCCCCCeEEEEEEeCCceE
Q 009246 178 ATSVGEKNVLIFDLGGGTF 196 (539)
Q Consensus 178 ~~~~~~~~vlV~D~GggT~ 196 (539)
...+++=+|.|.-
T Consensus 121 ------~~~v~v~~GTGig 133 (347)
T 2ch5_A 121 ------DGGVVLISGTGSN 133 (347)
T ss_dssp ------SCEEEEEESSSEE
T ss_pred ------CCcEEEEEcCCce
Confidence 2345555566543
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.68 E-value=0.0039 Score=66.27 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=61.7
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHH
Q 009246 288 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (539)
Q Consensus 288 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~ 367 (539)
-++.++-.+++.+++.+.-.++..++........++.|.++||.++++.+.+.+.+.| +.+|..+ ...++.|+|||+.
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHHH
Confidence 3677775445666666665555555433222345789999999999999999999999 6777665 4567999999999
Q ss_pred HHHHhC
Q 009246 368 AAILSG 373 (539)
Q Consensus 368 a~~~~~ 373 (539)
|+.-.+
T Consensus 487 A~~a~G 492 (554)
T 3l0q_A 487 GTVAAG 492 (554)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987553
No 46
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.65 E-value=0.0035 Score=65.44 Aligned_cols=79 Identities=24% Similarity=0.249 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 294 EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
.++++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.++..+..++.+.|.|||+.|+.-.+
T Consensus 359 ~~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 359 NELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 3445556666655555555443222345778999999999999999999999 678877655555689999999986553
No 47
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.56 E-value=0.0054 Score=64.23 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 294 EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
.++++.+++.+.-.++..++...... .++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 367 ~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 367 EHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 34456667777666677666654333 6789999999999999999999999 6777655 4556999999999986553
No 48
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.56 E-value=0.0055 Score=64.81 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 294 EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
..+++.+++.+.-.++..++..+.....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHh
Confidence 5567777777777777777776554456789999999999999999999999 6777554 567899999999988654
No 49
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.49 E-value=0.0056 Score=64.21 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcC
Confidence 445556666655555544433222235789999999999999999999999 6777654 4677999999999987553
No 50
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.45 E-value=0.0047 Score=64.90 Aligned_cols=77 Identities=23% Similarity=0.385 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++........++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 398 ~l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 398 NLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHHcC
Confidence 345555555544444433322111234789999999999999999999999 6777654 5667899999999986553
No 51
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.40 E-value=0.0065 Score=63.81 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccc-cccCCCchhhHhHHHHHHHHHh
Q 009246 294 EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL-CKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
.++++.+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.+ +.++ .. ..+.++.|+|||+.|+.-.
T Consensus 377 ~~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~ 452 (511)
T 3hz6_A 377 AQILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVEL 452 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHh
Confidence 344566666666666666655433 34 789999999999999999999999 6777 54 3688999999999998755
Q ss_pred C
Q 009246 373 G 373 (539)
Q Consensus 373 ~ 373 (539)
+
T Consensus 453 G 453 (511)
T 3hz6_A 453 E 453 (511)
T ss_dssp T
T ss_pred C
Confidence 3
No 52
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.34 E-value=0.79 Score=43.96 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=37.9
Q ss_pred cceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHH
Q 009246 322 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~ 371 (539)
.+.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+..+...
T Consensus 240 p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 240 TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 467999999887788888888877544565555 6678999999987643
No 53
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.33 E-value=0.22 Score=47.82 Aligned_cols=49 Identities=18% Similarity=0.116 Sum_probs=33.1
Q ss_pred cceEEEeCCCcCcHHHHHHHHhhhC-----------CccccccCCCchhhHhHHHHHHHH
Q 009246 322 VHDVVLVGGSTRIPKVQQLLQDFFN-----------GKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~-----------~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
.+.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.+.|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4579999998877777766665441 123333444567899999988754
No 54
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.22 E-value=0.0073 Score=63.31 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKM-DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 377 ~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 377 HFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhC
Confidence 34455555555444444433211 1234789999999999999999999999 6777554 5678999999999986553
No 55
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.20 E-value=0.0075 Score=64.32 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCc-CcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++........++.|.++||++ +++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.+
T Consensus 413 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 413 EIYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHHHHHhcC
Confidence 34556666665555554443322234578999999999 9999999999999 6777554 5678999999999987654
No 56
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.14 E-value=0.17 Score=49.34 Aligned_cols=48 Identities=23% Similarity=0.242 Sum_probs=32.5
Q ss_pred cceEEEeCCCcC-cHHHHHHHHhhhC---------CccccccCCCchhhHhHHHHHHH
Q 009246 322 VHDVVLVGGSTR-IPKVQQLLQDFFN---------GKELCKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 322 i~~ViLvGG~s~-~p~v~~~l~~~f~---------~~~v~~~~~p~~aVa~GAa~~a~ 369 (539)
.+.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++|||.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 457999999886 5777777766542 12344444566789999998764
No 57
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.12 E-value=0.007 Score=63.83 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----HcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHH
Q 009246 295 ELNMDLFRKCMEPVEKCLR----DAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~----~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
.+++.+++.+.-.++..++ ..+ ..++.|.++||+++++.+.+.+.+.| +.+|..+ ...++.|+|||+.|+.
T Consensus 375 ~i~RAvlEgia~~~r~~le~l~~~~g---~~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~ 449 (526)
T 3ezw_A 375 HIIRATLESIAYQTRDVLEAMQADSG---IRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGL 449 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHH
Confidence 3344555555444444333 344 34789999999999999999999999 6777665 5567899999999987
Q ss_pred HhC
Q 009246 371 LSG 373 (539)
Q Consensus 371 ~~~ 373 (539)
-.|
T Consensus 450 a~G 452 (526)
T 3ezw_A 450 AVG 452 (526)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 58
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.11 E-value=0.0062 Score=64.11 Aligned_cols=76 Identities=17% Similarity=0.103 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHH
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKM----DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~----~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
++++.+++.+.-.++..++.... .. .++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.
T Consensus 396 ~l~RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~ 472 (520)
T 4e1j_A 396 EFARAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGS 472 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHH
Confidence 34455555554444444433211 12 5788999999999999999999999 6777654 5677999999999987
Q ss_pred HhC
Q 009246 371 LSG 373 (539)
Q Consensus 371 ~~~ 373 (539)
-.+
T Consensus 473 a~G 475 (520)
T 4e1j_A 473 RAG 475 (520)
T ss_dssp HHT
T ss_pred HcC
Confidence 654
No 59
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.10 E-value=0.015 Score=60.90 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 294 EELNMDLFRKCMEPVEKCLRDAK-MDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 294 e~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
.++++.+++.+.-.++..++... .....++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+.-.
T Consensus 370 ~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 370 AHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGA 447 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhc
Confidence 34455566666555555555432 12234678999999999999999999999 6777655 456699999999998655
Q ss_pred C
Q 009246 373 G 373 (539)
Q Consensus 373 ~ 373 (539)
+
T Consensus 448 G 448 (495)
T 2dpn_A 448 G 448 (495)
T ss_dssp T
T ss_pred C
Confidence 3
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.08 E-value=0.0072 Score=63.45 Aligned_cols=73 Identities=23% Similarity=0.171 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHH---HHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246 296 LNMDLFRKCMEPVEKC---LRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 296 ~~~~~~~~i~~~i~~~---l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~ 372 (539)
+++.+++.+.-.++.. |++.+ ..++.|.++||+++++.+.+.+.+.+ +.++..+.. .++.|+|||+.|+.-.
T Consensus 375 l~rAvlEgia~~~~~~~~~l~~~g---~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~ 449 (508)
T 3ifr_A 375 LWRALLEAVALAFRHHVAVLDDIG---HAPQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGG 449 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHh
Confidence 3444555444333333 33334 34788999999999999999999999 677766543 5688999999998755
Q ss_pred C
Q 009246 373 G 373 (539)
Q Consensus 373 ~ 373 (539)
+
T Consensus 450 G 450 (508)
T 3ifr_A 450 G 450 (508)
T ss_dssp C
T ss_pred C
Confidence 4
No 61
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.07 E-value=0.0077 Score=63.24 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKM-DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 374 ~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 374 HIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 33455555554444444433211 0134778999999999999999999999 6777654 4677999999999987654
No 62
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.06 E-value=0.79 Score=44.04 Aligned_cols=50 Identities=16% Similarity=0.160 Sum_probs=36.7
Q ss_pred cceEEEeCCCcCcHHHHHHHHhhhCC-----ccccccCCCchhhHhHHHHHHHHH
Q 009246 322 VHDVVLVGGSTRIPKVQQLLQDFFNG-----KELCKNINPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~-----~~v~~~~~p~~aVa~GAa~~a~~~ 371 (539)
.+.|+|.||.+..+.+.+.|++.+.. .++....-.+.+.+.|||.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 56899999999888777888776632 234444566779999999887643
No 63
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.04 E-value=0.0087 Score=62.79 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKM-DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~ 373 (539)
++++.+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 376 ~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 376 DFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhC
Confidence 33445555554444443332211 1134778999999999999999999999 6777554 5778999999999987553
No 64
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=96.03 E-value=0.2 Score=53.05 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=57.4
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHH-hhhCCccccccCCCchhhHhH
Q 009246 285 YSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQ-DFFNGKELCKNINPDEAVAYG 363 (539)
Q Consensus 285 ~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~-~~f~~~~v~~~~~p~~aVa~G 363 (539)
.+.||..+++++.. .-..+..-++..|++++++..+|+.|+|.||++.---+.+.+. -.+|.........-..+.-.|
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~G 577 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLKG 577 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHHH
Confidence 36899999987543 3345667788889999999999999999999999877777765 345543222222233456667
Q ss_pred HHHH
Q 009246 364 AAVQ 367 (539)
Q Consensus 364 Aa~~ 367 (539)
|.+.
T Consensus 578 A~~~ 581 (631)
T 3zyy_X 578 ARKA 581 (631)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 65
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.86 E-value=1.4 Score=42.45 Aligned_cols=49 Identities=27% Similarity=0.213 Sum_probs=31.4
Q ss_pred cceEEEeCCCc-Cc-HHHHHHHHhhhC-------CccccccCCCchhhHhHHHHHHHH
Q 009246 322 VHDVVLVGGST-RI-PKVQQLLQDFFN-------GKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 322 i~~ViLvGG~s-~~-p~v~~~l~~~f~-------~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
.+.|+|.||.+ .. +.+.+.|++.+. ...+..+.-.+.+.++|||.++..
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 46899999877 54 555555555441 112444445567999999988753
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.83 E-value=0.012 Score=61.75 Aligned_cols=73 Identities=18% Similarity=0.236 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHH----cCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHH
Q 009246 296 LNMDLFRKCMEPVEKCLRD----AKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 296 ~~~~~~~~i~~~i~~~l~~----~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~ 371 (539)
+++.+++.+.-.++..++. .+ ..++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+.-
T Consensus 377 l~rAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~ 451 (504)
T 2d4w_A 377 IARAALEATAFQSREVVDAMNADSG---VDLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIA 451 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhh
Confidence 3444555444444444332 34 34678999999999999999999999 6777654 55679999999999875
Q ss_pred hC
Q 009246 372 SG 373 (539)
Q Consensus 372 ~~ 373 (539)
.+
T Consensus 452 ~G 453 (504)
T 2d4w_A 452 VG 453 (504)
T ss_dssp HT
T ss_pred cC
Confidence 53
No 67
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.81 E-value=0.22 Score=48.71 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=40.6
Q ss_pred CCcEEEEeCCCCCHHH----------------HHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEe
Q 009246 128 IKNAVVTVPAYFNDSQ----------------RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDL 191 (539)
Q Consensus 128 ~~~~VitVPa~~~~~q----------------r~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~ 191 (539)
+..+.|++|...+... ++.+.+. .|++ +.+.|+..|||++-..... ....++++++-+
T Consensus 81 i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~---~~~p-v~v~NDa~aaalgE~~~g~--~~~~~~~v~l~~ 154 (327)
T 2ap1_A 81 KGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSAR---LDRD-VRLDNDANCFALSEAWDDE--FTQYPLVMGLIL 154 (327)
T ss_dssp CCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHH---HTSC-EEEEEHHHHHHHHHHTSTT--GGGCSEEEEEEE
T ss_pred ccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHHH---HCCC-EEEecHHHHHHHHHHHhCc--CCCCCcEEEEEE
Confidence 5567888887543311 2333332 3665 7899999999986432211 113457888888
Q ss_pred CCceEEEEEEE
Q 009246 192 GGGTFDVSLLT 202 (539)
Q Consensus 192 GggT~Dvsv~~ 202 (539)
|.| .-.+++.
T Consensus 155 GtG-iG~giv~ 164 (327)
T 2ap1_A 155 GTG-VGGGLVL 164 (327)
T ss_dssp SSS-EEEEEEE
T ss_pred CCc-EEEEEEE
Confidence 888 4455543
No 68
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.78 E-value=0.0082 Score=59.44 Aligned_cols=83 Identities=17% Similarity=0.162 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCC-CCCeEEEEEEeCCceEEEEEEEE--eC--CEEEEEEecCCC
Q 009246 143 QRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATS-VGEKNVLIFDLGGGTFDVSLLTI--EE--GIFEVKATAGDT 217 (539)
Q Consensus 143 qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~-~~~~~vlV~D~GggT~Dvsv~~~--~~--~~~~v~~~~~~~ 217 (539)
..+.+.++-+..|++.-.+=.|-+|...+.+....... ......+|+|+|||+|+++++.- .. +.+ . .....
T Consensus 104 ~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~Sl 180 (343)
T 3cer_A 104 REEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSM 180 (343)
T ss_dssp HHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEE
Confidence 34555666666799864444444554333333222111 12345899999999999999864 21 111 1 12235
Q ss_pred CCchHHHHHHH
Q 009246 218 HLGGEDFDNRM 228 (539)
Q Consensus 218 ~lGG~~~d~~l 228 (539)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 79999888765
No 69
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.69 E-value=0.015 Score=60.97 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH----cCCCcCCc-ceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHH
Q 009246 295 ELNMDLFRKCMEPVEKCLRD----AKMDKSTV-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~----~~~~~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~ 369 (539)
++++.+++.+.-.++..++. .+. .+ +.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|.|||+.|+
T Consensus 379 ~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~ 453 (503)
T 2w40_A 379 HIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAG 453 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHH
Confidence 33445555554444444433 232 35 78999999999999999999999 6777654 456699999999998
Q ss_pred HHhC
Q 009246 370 ILSG 373 (539)
Q Consensus 370 ~~~~ 373 (539)
.-.+
T Consensus 454 ~~~G 457 (503)
T 2w40_A 454 LEVK 457 (503)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 6553
No 70
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.62 E-value=0.6 Score=47.10 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=31.6
Q ss_pred cceEEEeCCCcC-cHHHHHHHHhhhC---------CccccccCCCchhhHhHHHHHHHH
Q 009246 322 VHDVVLVGGSTR-IPKVQQLLQDFFN---------GKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 322 i~~ViLvGG~s~-~p~v~~~l~~~f~---------~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
.+.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++|||+....
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~ 393 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDA 393 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHH
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHH
Confidence 457999999876 3666666655431 223444445667899999876543
No 71
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.29 E-value=0.024 Score=59.12 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHH
Q 009246 289 TRARFEELNMDLFRKCMEPVEKCLRDAKM-DKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (539)
Q Consensus 289 tr~~~e~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~ 367 (539)
++.++ ++.+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+ +.++.... .++.|.|||+.
T Consensus 363 t~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~ 436 (489)
T 2uyt_A 363 SDAEL---ARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGI 436 (489)
T ss_dssp SHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHH
Confidence 45444 344444444433333332211 1134678999999999999999999999 67776543 68999999776
Q ss_pred HHH
Q 009246 368 AAI 370 (539)
Q Consensus 368 a~~ 370 (539)
|..
T Consensus 437 A~~ 439 (489)
T 2uyt_A 437 QLM 439 (489)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 72
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.26 E-value=1.3 Score=44.12 Aligned_cols=89 Identities=16% Similarity=0.245 Sum_probs=51.3
Q ss_pred eHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCCCCCH----------------HHHHHHHHHHHHcCCceeEeechh
Q 009246 104 AAEEISSMVLIKMREIAEAY--LGSTIKNAVVTVPAYFND----------------SQRQATKDAGVIAGLNVMRIINEP 165 (539)
Q Consensus 104 ~~~~v~~~~L~~l~~~a~~~--~~~~~~~~VitVPa~~~~----------------~qr~~l~~Aa~~aGl~~~~li~Ep 165 (539)
++++++..+...+.+..... ...++..+.|++|...+. .-++.+.+. .|++ +.+.|+.
T Consensus 123 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDa 198 (380)
T 2hoe_A 123 DREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDA 198 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechH
Confidence 35555555555554443332 134566788888875432 112334333 3765 7899999
Q ss_pred HHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEE
Q 009246 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (539)
Q Consensus 166 ~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (539)
.|||++....... . ++++++-+|.| +-.+++
T Consensus 199 naaalaE~~~g~~---~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 199 DMGAVGEKWYTKR---D-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HHHHHHHHHHTTC---C-SCEEEEEESSS-CEEEEE
T ss_pred HHHHHHHHHhCCC---C-CcEEEEEeCCc-eEEEEE
Confidence 9999875332221 2 56788888887 445555
No 73
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.86 E-value=1.9 Score=43.66 Aligned_cols=92 Identities=17% Similarity=0.304 Sum_probs=49.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHh--CCCCCcEEEEeCCC---------------CCH-HHHHHHHHHHHHcCCceeEeechh
Q 009246 104 AAEEISSMVLIKMREIAEAYL--GSTIKNAVVTVPAY---------------FND-SQRQATKDAGVIAGLNVMRIINEP 165 (539)
Q Consensus 104 ~~~~v~~~~L~~l~~~a~~~~--~~~~~~~VitVPa~---------------~~~-~qr~~l~~Aa~~aGl~~~~li~Ep 165 (539)
.+++++..+...+.+.....- ..++..+.|++|.. |.. .-++.+.+. .|++ +.+.|+.
T Consensus 143 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~---~~~p-V~v~NDa 218 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKA---TGLP-VFVANDT 218 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHH---HCSC-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHH---hCCC-EEEechh
Confidence 355555555555555443321 12344456666653 321 223444443 3766 6899999
Q ss_pred HHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 166 ~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
.|||++-..... ....++++++-+|.| +-.+++.
T Consensus 219 ~aaalaE~~~g~--~~~~~~~v~l~~GtG-iG~giv~ 252 (429)
T 1z05_A 219 RAWALAEKLFGH--SQDVDNSVLISIHHG-LGAGIVL 252 (429)
T ss_dssp HHHHHHHHHHST--TTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHHHHHHHHhCC--CCCCCcEEEEEECCc-EEEEEEE
Confidence 999986432211 113356788888887 4555553
No 74
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=94.67 E-value=3.2 Score=39.76 Aligned_cols=63 Identities=19% Similarity=0.136 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcC--cHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHH
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTR--IPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAA 369 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~ 369 (539)
...++++..+.+-..+...-.. +.+.|+|.||.+. .|.+.+.+++.+ . .|+.+.+.||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3445555555555555544322 5678999999864 466666676643 1 256788999998864
No 75
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=94.61 E-value=3.6 Score=40.04 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC--CccccccC---CCchhhHhHHHHHHHHH
Q 009246 302 RKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNI---NPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 302 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVa~GAa~~a~~~ 371 (539)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++..+. --|.+++.|+|.+....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 333444444444433 5689999999999999999998762 33444433 23568888988765433
No 76
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.40 E-value=0.079 Score=55.42 Aligned_cols=78 Identities=17% Similarity=0.211 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHH
Q 009246 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 223 (539)
Q Consensus 144 r~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~ 223 (539)
...+.++-+..|++.-.+=.|-+|...+.+...... ..+..+|+|+|||+|.+++.+ ++.+.. ....++|...
T Consensus 99 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vr 171 (513)
T 1u6z_A 99 TDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP--EKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVS 171 (513)
T ss_dssp HHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSC--CCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHH
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhcc--CCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHH
Confidence 345555555679886544444455444444333211 112689999999999999875 444321 2235799988
Q ss_pred HHHHH
Q 009246 224 FDNRM 228 (539)
Q Consensus 224 ~d~~l 228 (539)
+.+.+
T Consensus 172 lte~f 176 (513)
T 1u6z_A 172 FAQLY 176 (513)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 77
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.53 E-value=0.1 Score=54.16 Aligned_cols=71 Identities=8% Similarity=0.000 Sum_probs=53.5
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhh-hCCccccccCCCchhhHhHHHHHHHH
Q 009246 294 EELNMDLFRK--CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDF-FNGKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 294 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~-f~~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
..+.+.+++. +.-.++.+++.... .+.|.++||+++++.+.+.+.+. | +.++..+. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4556666663 55556666665432 26899999999999999999999 9 67776664 456889999999864
No 78
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.06 E-value=0.19 Score=52.48 Aligned_cols=77 Identities=21% Similarity=0.272 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchH
Q 009246 143 QRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 222 (539)
Q Consensus 143 qr~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~ 222 (539)
....+.++-+..|++.-.+=.|-+|...+.+..... .....+|+|+|||+|.+++.+ ++.+ ......++|..
T Consensus 102 ~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~---~~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~lG~v 173 (508)
T 3hi0_A 102 GPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGF---YQPDGIAGDLGGGSLELIDIK--DKSC---GEGITLPLGGL 173 (508)
T ss_dssp HHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHS---SSCEEEEEEECSSCEEEEEEE--TTEE---CCCEEESCCHH
T ss_pred HHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcC---CCCCeEEEEeCCCceEEEEee--CCee---eeEEEecceEE
Confidence 455666666678998654444555554444443321 122349999999999999987 3332 12223578887
Q ss_pred HHHHH
Q 009246 223 DFDNR 227 (539)
Q Consensus 223 ~~d~~ 227 (539)
.+.+.
T Consensus 174 rl~e~ 178 (508)
T 3hi0_A 174 RLSEQ 178 (508)
T ss_dssp HHHHH
T ss_pred ehhhc
Confidence 77653
No 79
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=90.96 E-value=0.69 Score=45.55 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCcccccc----CCCchhhHhHHHHHHHHH
Q 009246 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN----INPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 296 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~----~~p~~aVa~GAa~~a~~~ 371 (539)
+..-+.+=+...|.+.++... ..++.|+++||+++.|.|.++|++.+++.++..+ .+|+.-=|..-|++|...
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 344444444555555565443 2357899999999999999999999976655433 246655566677777654
Q ss_pred h
Q 009246 372 S 372 (539)
Q Consensus 372 ~ 372 (539)
.
T Consensus 338 l 338 (371)
T 3qbx_A 338 L 338 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 80
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=90.68 E-value=7.8 Score=40.47 Aligned_cols=184 Identities=16% Similarity=0.183 Sum_probs=91.6
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEE
Q 009246 127 TIKNAVVTV-PAYFNDSQRQAT--KDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 203 (539)
Q Consensus 127 ~~~~~VitV-Pa~~~~~qr~~l--~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 203 (539)
.++.+++|. |..|+.-..-.. +..|...|++.+. |+.-.|-+++...... ...+ +++-+.||++.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~--~~~p---~~l~vsGg~t~~~~~-- 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTE--AEDP---LTLYVSGGNTQVIAY-- 143 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSS--CSSC---EEEEECSSCEEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcC--CCCC---cEEEEcCCCcEEEEE--
Confidence 566666666 766654422111 2233444666544 4554554443323222 1122 556666777766544
Q ss_pred eCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCee
Q 009246 204 EEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID 283 (539)
Q Consensus 204 ~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d 283 (539)
..+.+++++..-+ .--|+.||. +...+ +......+ .+...|.+.+..+ .++....+.+
T Consensus 144 ~~~~~~~lg~t~d-~s~G~~~D~-~a~~l--------gl~~~gg~----~ie~lA~~g~~~~--------~~p~~~~~~~ 201 (540)
T 3en9_A 144 VSKKYRVFGETLD-IAVGNCLDQ-FARYV--------NLPHPGGP----YIEELARKGKKLV--------DLPYTVKGMD 201 (540)
T ss_dssp ETTEEEEEEEBSS-SCHHHHHHH-HHHHT--------TCCSSCHH----HHHHHHHTCCCCC--------CCCCCEETTE
T ss_pred eCCceEEEeeccc-hHhHHHHHH-HHHHc--------CCCCCCHH----HHHHHHHcCCccC--------cCCCCCCCcc
Confidence 4688999887664 456778874 33333 22222212 2222333222111 1111111222
Q ss_pred eEEE-------------EcHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 284 FYST-------------ITRARFEELNM-DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 284 ~~~~-------------itr~~~e~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
+++. .+..++...+. .+++.+.+.+.++++..+ ++.|+|+||-+....+++.|.+.+
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 2110 01222221111 233444455566666554 568999999999999999999876
No 81
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=90.23 E-value=4.3 Score=42.51 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=51.3
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCcccccc-CCCchhhHhHHHHH
Q 009246 290 RARFEELNMDL-FRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN-INPDEAVAYGAAVQ 367 (539)
Q Consensus 290 r~~~e~~~~~~-~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~-~~p~~aVa~GAa~~ 367 (539)
..++...+... .+-+.+.+..+.+..+ ++.|+|.||.+....+++.|.+..+-..+..+ .--|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 34444333332 2333445555555544 67899999999999999999876532233322 34577899999999
Q ss_pred HHHHhC
Q 009246 368 AAILSG 373 (539)
Q Consensus 368 a~~~~~ 373 (539)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876654
No 82
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=88.36 E-value=1.4 Score=43.40 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCcccccc----CCCchhhHhHHHHHHHH
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN----INPDEAVAYGAAVQAAI 370 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~----~~p~~aVa~GAa~~a~~ 370 (539)
++..-+.+=+...|.+.++... ..+.|+++||+++.|.|.++|++.+++.++... .+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444455555566666665542 356899999999999999999999976544322 24554444555667665
Q ss_pred Hh
Q 009246 371 LS 372 (539)
Q Consensus 371 ~~ 372 (539)
..
T Consensus 343 ~l 344 (370)
T 3cqy_A 343 YQ 344 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 83
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=87.76 E-value=3.7 Score=38.18 Aligned_cols=46 Identities=20% Similarity=0.271 Sum_probs=26.3
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCc
Q 009246 288 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRI 334 (539)
Q Consensus 288 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~ 334 (539)
+-+...+.+-..++......|+..+++..... .--.|+++||.+.+
T Consensus 178 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~ 223 (249)
T 3bex_A 178 VGKDTEENIRLGVVNGSVYALEGIIGRIKEVY-GDLPVVLTGGQSKI 223 (249)
T ss_dssp SBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEESTTSGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCChHH
Confidence 34445556666666655555555554332111 11269999999886
No 84
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=85.79 E-value=2.3 Score=41.54 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC--CccccccC---CCchhhHhHHHHHHHHHh
Q 009246 300 LFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNI---NPDEAVAYGAAVQAAILS 372 (539)
Q Consensus 300 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVa~GAa~~a~~~~ 372 (539)
+.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+. +.++..+. -.|.+++.|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 34444555556665554 5689999999999999999998763 33444433 346789999987655444
No 85
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=84.36 E-value=2.6 Score=44.93 Aligned_cols=50 Identities=20% Similarity=0.244 Sum_probs=39.3
Q ss_pred CcceEEEeCCCcCcHHHHHHHHhhhCCcccccc---CCCchhhHhHHHHHHHH
Q 009246 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN---INPDEAVAYGAAVQAAI 370 (539)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~---~~p~~aVa~GAa~~a~~ 370 (539)
.++.|+|+||-+...+|++.|.+.+.+.++..+ .--|.++|.|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 367899999999999999999998754444332 23477999999998864
No 86
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=83.78 E-value=2.2 Score=46.46 Aligned_cols=51 Identities=29% Similarity=0.354 Sum_probs=39.4
Q ss_pred cceEEEeCCCcCcHHHHHHHHhhhC--Ccccccc-CC--CchhhHhHHHHHHHHHh
Q 009246 322 VHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKN-IN--PDEAVAYGAAVQAAILS 372 (539)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~-~~--p~~aVa~GAa~~a~~~~ 372 (539)
++.|+|+||-+...+|++.|.+.+. +.++..+ .- -|.++|.|.|++|+...
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 5689999999999999999998762 3444332 12 37899999999987654
No 87
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=82.58 E-value=6.8 Score=40.18 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHcCCce--eEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 141 DSQRQATKDAGVIAGLNV--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 141 ~~qr~~l~~Aa~~aGl~~--~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
..-.+.+++|.+.-|+++ +.++|...|++++..+.. ....+-+=+|-||=-+-+.+
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~------~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD------PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC------CCcEEEEEEecCcceEEEee
Confidence 456788899998889863 689999999998765432 24566667788765544444
No 88
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=81.07 E-value=2.8 Score=45.78 Aligned_cols=62 Identities=18% Similarity=0.293 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC--CccccccCC---CchhhHhHHHHHHHHH
Q 009246 305 MEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNIN---PDEAVAYGAAVQAAIL 371 (539)
Q Consensus 305 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~~---p~~aVa~GAa~~a~~~ 371 (539)
.+.+.++.+.. .++.|+|+||......+++.|.+.+. +.++..+.. -|..+|.|+|++|+..
T Consensus 694 ~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 694 AHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34444444443 36789999999999999999998874 334443322 3778999999988654
No 89
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=77.99 E-value=7.1 Score=39.80 Aligned_cols=93 Identities=8% Similarity=-0.059 Sum_probs=58.4
Q ss_pred eHHHHHHHHHHHHHHHHHHHhC---CC-CCcEEEEeCCC-----------CC-H-------HHHHHHHHHHHHcCCc--e
Q 009246 104 AAEEISSMVLIKMREIAEAYLG---ST-IKNAVVTVPAY-----------FN-D-------SQRQATKDAGVIAGLN--V 158 (539)
Q Consensus 104 ~~~~v~~~~L~~l~~~a~~~~~---~~-~~~~VitVPa~-----------~~-~-------~qr~~l~~Aa~~aGl~--~ 158 (539)
+.++++..+...+.+..+.+.. .. +..+.++.|.. |+ . .-++.+.++.+..|++ +
T Consensus 103 ~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~glpv~v 182 (457)
T 2yhx_A 103 IPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDXXXS 182 (457)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccccceeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcCCccee
Confidence 4566666666666665544321 11 23455566654 75 3 4567788888766775 4
Q ss_pred eEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 159 MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 159 ~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
+.++|...|++++-... ...+++.+=+|-|+=-.-+..
T Consensus 183 val~NDa~~tll~e~~~------~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 183 VADIXDSHGILXXVNYT------DAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp EEEECHHHHHHHHHHHH------CTTEEEEEEESSSEEEEEEEC
T ss_pred EEEEecchhhccchhhc------CCccEEEEEECcEEEEEEEEC
Confidence 88999999999976552 234667777888855444444
No 90
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=77.03 E-value=21 Score=36.02 Aligned_cols=54 Identities=19% Similarity=0.267 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcC---CceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEE
Q 009246 141 DSQRQATKDAGVIAG---LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSL 200 (539)
Q Consensus 141 ~~qr~~l~~Aa~~aG---l~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv 200 (539)
..-.+.+++|.+.-| ++++.++|..+|+.++..... ....+-+=+|-||=-+-+
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~------~~~~iglIlGTGtNa~y~ 216 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED------PRCEIGLIVGTGTNACYM 216 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEE
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC------CCceEEEEEeCCceEEEE
Confidence 345778888887764 467899999999988754432 235566667777544333
No 91
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=76.05 E-value=20 Score=34.18 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEE
Q 009246 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (539)
Q Consensus 144 r~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (539)
++.+.+. .|++ +.+.|+..|||++-..... ....++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~--~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGE--AXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHST--TTTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCC--CCCCCcEEEEEECCc-eEEEEE
Confidence 4444443 3776 6899999999986433211 123456788888876 445554
No 92
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=75.51 E-value=3.5 Score=40.57 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=27.7
Q ss_pred CCceeEeechhHHHHHhc-----ccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 155 GLNVMRIINEPTAAAIAY-----GLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 155 Gl~~~~li~Ep~Aaa~~~-----~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
|+. +.+|+-.+=|.+.| ....-. ....++++|+|+|||++.++...
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~-~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLK-SVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSS-SCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhcc-ccccccEEEEEeCCCceEEEEec
Confidence 544 56666554444433 222110 01234699999999999999873
No 93
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=75.17 E-value=1.2 Score=46.37 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=16.8
Q ss_pred CCCCCCCCEEEEEcCccceeeeEE
Q 009246 1 MAGKGEGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~ 24 (539)
|...++..++|||+|||+++++++
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~ 24 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILV 24 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEE
T ss_pred CCcccCCEEEEEEecCcceEEEEE
Confidence 555667889999999999998876
No 94
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=72.01 E-value=53 Score=32.65 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=23.7
Q ss_pred CCcceEEEeCCCc-CcHHHHHHHHhhh
Q 009246 320 STVHDVVLVGGST-RIPKVQQLLQDFF 345 (539)
Q Consensus 320 ~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (539)
..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4699999999999 9999999999866
No 95
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=71.53 E-value=55 Score=31.48 Aligned_cols=51 Identities=22% Similarity=0.240 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEE
Q 009246 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (539)
Q Consensus 144 r~~l~~Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (539)
++.+.+. .|++ +.+.|+..|||++...... ....++++++-+|.| +-.+++
T Consensus 124 ~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~--~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 124 RTPLSDT---LHLP-VWVDNDGNCAALAERKFGQ--GKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHTST--TTTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---HCCC-EEEechhHHHHHHHHHhCC--CCCCCcEEEEEECCC-EEEEEE
Confidence 3444443 3665 6889999999986432211 112356788888887 455555
No 96
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=68.56 E-value=2.7 Score=43.81 Aligned_cols=19 Identities=37% Similarity=0.420 Sum_probs=16.8
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
+..++|||+|||+++++++
T Consensus 25 ~~~~lgIDiGtts~k~~l~ 43 (520)
T 4e1j_A 25 GGYILAIDQGTTSTRAIVF 43 (520)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred hCeEEEEEeCCcceEEEEE
Confidence 4579999999999998877
No 97
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=68.31 E-value=20 Score=35.22 Aligned_cols=47 Identities=26% Similarity=0.316 Sum_probs=29.4
Q ss_pred cCCceeEeechhHHHHHhccccc-----------ccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 154 AGLNVMRIINEPTAAAIAYGLDK-----------KATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 154 aGl~~~~li~Ep~Aaa~~~~~~~-----------~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
.|++ +.+.|+..|+|++-.... .......++++++-+|.| +-.+++.
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi 165 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVI 165 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEE
Confidence 4777 689999999998643222 001123567888888875 4455553
No 98
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=68.20 E-value=9.5 Score=35.93 Aligned_cols=47 Identities=21% Similarity=0.216 Sum_probs=33.0
Q ss_pred cceEEEeCCCcCcHHHHHHHHhhhCCc------cccccCCCchhhHhHHHHHH
Q 009246 322 VHDVVLVGGSTRIPKVQQLLQDFFNGK------ELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~~------~v~~~~~p~~aVa~GAa~~a 368 (539)
.+.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 457999999887777888887766332 23334455678999999875
No 99
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=66.15 E-value=47 Score=33.76 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcC---CceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 141 DSQRQATKDAGVIAG---LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 141 ~~qr~~l~~Aa~~aG---l~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
..-.+.+++|.+.-| ++++.++|..+|..++..... +...+-+=+|-||= .+.++
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~------~~~~iGlI~GTGtN-a~Y~E 241 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED------HQCEVGMIVGTGCN-ACYME 241 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEE-EEEEE
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC------CCceEEEEEecCCc-eEEee
Confidence 345788899998887 367889999999887655432 23556666788755 44443
No 100
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=65.88 E-value=3.7 Score=32.09 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=15.1
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||+|+..+++|+.
T Consensus 2 riLglD~G~kriGvAvs 18 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVG 18 (98)
T ss_dssp CEEEEEESSSEEEEEEE
T ss_pred cEEEEEeCCCEEEEEEE
Confidence 38999999999999874
No 101
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=64.95 E-value=3.1 Score=43.31 Aligned_cols=20 Identities=25% Similarity=0.096 Sum_probs=17.0
Q ss_pred CCCCEEEEEcCccceeeeEE
Q 009246 5 GEGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 5 ~~~~vvGID~GTt~s~va~~ 24 (539)
.+..++|||+|||+++++++
T Consensus 3 ~~~~~lgIDiGtts~ka~l~ 22 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVT 22 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccccEEEEEE
Confidence 35689999999999998765
No 102
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=64.72 E-value=2.9 Score=43.98 Aligned_cols=19 Identities=37% Similarity=0.595 Sum_probs=17.2
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVF 22 (554)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEE
Confidence 5689999999999999887
No 103
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=64.58 E-value=9.3 Score=38.89 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.1
Q ss_pred CeEEEEEEeCCceEEEEEEE
Q 009246 183 EKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 183 ~~~vlV~D~GggT~Dvsv~~ 202 (539)
...++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 104
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=64.24 E-value=3.3 Score=42.99 Aligned_cols=22 Identities=36% Similarity=0.404 Sum_probs=17.9
Q ss_pred CCCCCCCCEEEEEcCccceeeeEE
Q 009246 1 MAGKGEGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~ 24 (539)
|+ .+..++|||+|||+++++++
T Consensus 1 m~--~~~~~lgIDiGtts~k~~l~ 22 (506)
T 3h3n_X 1 MA--EKNYVMAIDQGTTSSRAIIF 22 (506)
T ss_dssp -C--CCCEEEEEEECSSEEEEEEE
T ss_pred CC--CCCEEEEEEcCCCceEEEEE
Confidence 55 35689999999999999887
No 105
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=63.49 E-value=2.7 Score=43.30 Aligned_cols=19 Identities=53% Similarity=0.863 Sum_probs=14.9
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|||+++++++
T Consensus 5 m~~~lgIDiGTts~Ka~l~ 23 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLW 23 (482)
T ss_dssp ---CEEEEECSSEEEEEEE
T ss_pred hceEEEEEcCCCCeEEEEE
Confidence 5689999999999998876
No 106
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=62.29 E-value=3.2 Score=43.05 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=17.0
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|||+++++++
T Consensus 3 m~~~lgIDiGtts~K~~l~ 21 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLY 21 (504)
T ss_dssp CEEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEE
Confidence 4689999999999998877
No 107
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=61.28 E-value=3.4 Score=42.60 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=17.0
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|||+++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~ 21 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLA 21 (489)
T ss_dssp CEEEEEEEECSSEEEEEEE
T ss_pred cceEEEEEecCCCceEEEE
Confidence 5679999999999999887
No 108
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=60.51 E-value=34 Score=32.61 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=34.4
Q ss_pred CcceEEEeCCCcCc-----HHHHHHHHhhhC------CccccccCCCchhhHhHHHHHHHH
Q 009246 321 TVHDVVLVGGSTRI-----PKVQQLLQDFFN------GKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 321 ~i~~ViLvGG~s~~-----p~v~~~l~~~f~------~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
+.+.|+|-||.+.. +.+++.+++.+. ..++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 35689999998765 467777777652 123444445678999999988754
No 109
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=59.90 E-value=3.8 Score=43.25 Aligned_cols=19 Identities=26% Similarity=0.296 Sum_probs=16.3
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
+..++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~ 22 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLI 22 (572)
T ss_dssp -CEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEecCCcceEEEEE
Confidence 5689999999999998776
No 110
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=59.88 E-value=4 Score=42.57 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=16.8
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
...++|||+|||.++++++
T Consensus 3 kkYvlgID~GTss~Ka~l~ 21 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVM 21 (526)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccccceeeeEE
Confidence 5689999999999998776
No 111
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=58.79 E-value=4.7 Score=41.86 Aligned_cols=19 Identities=21% Similarity=0.027 Sum_probs=17.1
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
+..++|||+|||+++++++
T Consensus 4 m~~~lgIDiGtts~k~~l~ 22 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALA 22 (511)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred ccEEEEEEeCCCceEEEEE
Confidence 5689999999999998877
No 112
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=58.13 E-value=75 Score=35.39 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcC-Cc--eeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEE
Q 009246 141 DSQRQATKDAGVIAG-LN--VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (539)
Q Consensus 141 ~~qr~~l~~Aa~~aG-l~--~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (539)
..-++.+.++....| ++ ++.++|...|++++-... ...+++.+=+|-|+=-.-+.
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~------~~~~~iglilGTGvngg~i~ 240 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD------DQHCEVGLIIGTGTNACYME 240 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH------CTTEEEEEEESSSEEEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc------CCCcEEEEEEECCcceEEEe
Confidence 345777788877666 64 689999999999865443 12466777788875433333
No 113
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=57.98 E-value=6 Score=33.01 Aligned_cols=17 Identities=29% Similarity=0.323 Sum_probs=15.5
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||+|+..+++|+.
T Consensus 4 ~iLglD~G~kriGvAvs 20 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVG 20 (138)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEE
Confidence 58999999999999985
No 114
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=57.65 E-value=4.8 Score=41.76 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=17.0
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|||+++++++
T Consensus 2 ~~~~lgIDiGtts~k~~l~ 20 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVM 20 (510)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEcCCcceEEEEE
Confidence 4579999999999999887
No 115
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=57.32 E-value=1.3e+02 Score=33.45 Aligned_cols=57 Identities=11% Similarity=0.150 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 140 NDSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 140 ~~~qr~~l~~Aa~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
...-.+.+++|...- ++ +++.++|...|++++..... ....+-+=+|-|+=-.-+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~------~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE------PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC------CCcEEEEEEeCCeeEEEEEc
Confidence 555677888887654 45 58999999999988765442 23566667788765444443
No 116
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=56.13 E-value=4.8 Score=42.08 Aligned_cols=19 Identities=21% Similarity=0.109 Sum_probs=16.5
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
+..++|||+|||.++++++
T Consensus 9 ~~~~lgID~GTts~Ka~l~ 27 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAV 27 (538)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEEEcCcCEEEEEE
Confidence 4689999999999998765
No 117
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=55.65 E-value=22 Score=35.15 Aligned_cols=48 Identities=19% Similarity=0.141 Sum_probs=32.4
Q ss_pred CcceEEEeCCCcCcHH-HHHHHHhhhCCc---cccccCCCchhhHhHHHHHH
Q 009246 321 TVHDVVLVGGSTRIPK-VQQLLQDFFNGK---ELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 321 ~i~~ViLvGG~s~~p~-v~~~l~~~f~~~---~v~~~~~p~~aVa~GAa~~a 368 (539)
+++.|+|.||.+..+. +.+.+++.+... .+......+.+.+.||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 4679999999887544 777787776422 23323333358999999775
No 118
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=54.44 E-value=13 Score=35.19 Aligned_cols=66 Identities=6% Similarity=-0.081 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcC-CcceEEEeCCCcCc--HHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHH
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKS-TVHDVVLVGGSTRI--PKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~~--p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
...++++..+.+-..+ ... .. +.+.|+|.||-+.. +.+++.+++... ++. .|..+...||+.++..
T Consensus 212 A~~i~~~~~~~La~~i-~~~--~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i~---~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLR--YNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TLG---SVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGG--GCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CEE---EEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hcc--cCCCCceEEEECchHHhhHHHHHHHHHHcCC--eec---ccCcCHHHHHHHHHHh
Confidence 4445555555555555 222 22 46789999998876 677777766532 222 3557889999999864
No 119
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=53.33 E-value=6.1 Score=40.82 Aligned_cols=18 Identities=28% Similarity=0.287 Sum_probs=15.7
Q ss_pred CCEEEEEcCccceeeeEE
Q 009246 7 GPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (539)
..++|||+|||+++++++
T Consensus 2 ~~~lgiDiGtT~~k~~l~ 19 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILF 19 (495)
T ss_dssp -CEEEEEECSSEEEEEEE
T ss_pred cEEEEEeeCCcceEEEEE
Confidence 368999999999999887
No 120
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=52.69 E-value=44 Score=34.15 Aligned_cols=25 Identities=28% Similarity=0.513 Sum_probs=21.9
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeCC
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEEG 206 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~ 206 (539)
+...+|.+|+||.++-+.++++.++
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457999999999999999999765
No 121
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=52.63 E-value=6.4 Score=33.36 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=15.7
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||+|+..+++|+.
T Consensus 4 riLGiDpG~~riGvAv~ 20 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALS 20 (150)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEEccCCEEEEEEE
Confidence 58999999999999987
No 122
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=50.43 E-value=6.4 Score=40.75 Aligned_cols=18 Identities=22% Similarity=0.191 Sum_probs=16.0
Q ss_pred CCEEEEEcCccceeeeEE
Q 009246 7 GPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (539)
..++|||+|||+++++++
T Consensus 4 ~~~lgIDiGtT~~k~~l~ 21 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFY 21 (503)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEE
Confidence 468999999999998876
No 123
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=50.17 E-value=7.6 Score=40.10 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=16.1
Q ss_pred CCEEEEEcCccceeeeEE
Q 009246 7 GPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (539)
..++|||+|||+++++++
T Consensus 3 ~~~lgiDiGtt~~k~~l~ 20 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIF 20 (497)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEecCCchhEEEEE
Confidence 468999999999998877
No 124
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=50.00 E-value=21 Score=36.14 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=27.3
Q ss_pred ceeEeechhHHHHHhc-----ccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 157 NVMRIINEPTAAAIAY-----GLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 157 ~~~~li~Ep~Aaa~~~-----~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
..+++|+..+=|.++| .+..-.. .....+.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~-~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKT-PGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC----CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccC-CCCCceEEEecCCCceEEEecc
Confidence 4578888665554433 3322110 1234678999999999998754
No 125
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=48.75 E-value=8.2 Score=39.88 Aligned_cols=18 Identities=33% Similarity=0.298 Sum_probs=16.3
Q ss_pred CCEEEEEcCccceeeeEE
Q 009246 7 GPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (539)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~ 23 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILF 23 (501)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCccceEEEEE
Confidence 479999999999998877
No 126
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=48.40 E-value=87 Score=31.68 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=33.9
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeCCE---EEEEEecCCCCC---chHHHHHHHHHHHHH
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEEGI---FEVKATAGDTHL---GGEDFDNRMVNHFVQ 234 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~---~~v~~~~~~~~l---GG~~~d~~l~~~l~~ 234 (539)
....++.+|+||.++-+.++...+.. ++.....-...+ ++..+=..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 45578999999999999999988764 222222222232 556655556655543
No 127
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=47.41 E-value=11 Score=36.40 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=39.8
Q ss_pred EcHHHHHHHHHHHHHHH----HHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccc--cc-cCCCchhh
Q 009246 288 ITRARFEELNMDLFRKC----MEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL--CK-NINPDEAV 360 (539)
Q Consensus 288 itr~~~e~~~~~~~~~i----~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v--~~-~~~p~~aV 360 (539)
++.++.+++.+.+.++. .+.+.+++++.+ +..|+.+||+ ++|...+.+.++-..+ .. +.+.+-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 35566666665555544 444555554443 3379999987 4666666554311100 01 22345577
Q ss_pred HhHHHHH
Q 009246 361 AYGAAVQ 367 (539)
Q Consensus 361 a~GAa~~ 367 (539)
|.|+|++
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888865
No 128
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=45.77 E-value=38 Score=33.16 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=16.2
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
++.++|||+|.|++.++++
T Consensus 28 ~~~~lgiDiGgt~i~~~l~ 46 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFV 46 (373)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEE
Confidence 4578999999999998765
No 129
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=45.07 E-value=51 Score=25.05 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=31.7
Q ss_pred CCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEEEEecCCeeEEEEEEEcCCCceeeEEc
Q 009246 426 QPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQS 494 (539)
Q Consensus 426 q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~i~~ 494 (539)
++...+.|+|...........-|-|.|+++++ +...|.|+|+++|. +|++..++.
T Consensus 24 ~s~A~V~v~qnG~~iy~~~VppGpF~I~dl~~-------------~~~~Gdl~V~v~ea-dG~~~~~~v 78 (90)
T 3fcg_A 24 RTQARVEVLRDGYTVSNELVPSGPFELANLPL-------------GGGSGELKVIIHES-DGTKQVFTV 78 (90)
T ss_dssp SSSEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEECT-TSCEEEEEE
T ss_pred cCCcEEEEEECCEEEEEeEeCCCCeEEcCCcc-------------cCCceeEEEEEEEC-CCCEEEEEE
Confidence 34567888886655444555568888887664 23355666666654 455544443
No 130
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=44.96 E-value=76 Score=30.43 Aligned_cols=18 Identities=33% Similarity=0.375 Sum_probs=15.5
Q ss_pred CCEEEEEcCccceeeeEE
Q 009246 7 GPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (539)
..++|||+|+|+++++++
T Consensus 30 ~~~lgiDiGgt~i~~~l~ 47 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIV 47 (343)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEE
Confidence 568999999999988765
No 131
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.11 E-value=40 Score=31.96 Aligned_cols=49 Identities=18% Similarity=0.183 Sum_probs=31.3
Q ss_pred cceEEEeCCCcCcH----HHHHHHHhhhCC------------ccccccCCCchhhHhHHHHHHHH
Q 009246 322 VHDVVLVGGSTRIP----KVQQLLQDFFNG------------KELCKNINPDEAVAYGAAVQAAI 370 (539)
Q Consensus 322 i~~ViLvGG~s~~p----~v~~~l~~~f~~------------~~v~~~~~p~~aVa~GAa~~a~~ 370 (539)
.+.|+|-||.++.+ .+++.+++.... ..+....-.+.+.++|||.++..
T Consensus 225 Pe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 225 PXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred chhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 56899999988754 455555554311 12333444567999999988753
No 132
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=43.96 E-value=11 Score=35.23 Aligned_cols=70 Identities=14% Similarity=0.313 Sum_probs=39.8
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHH
Q 009246 288 ITRARFEELNMDLFRKCMEPVEKCLRDAKMD--KSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAA 365 (539)
Q Consensus 288 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa 365 (539)
+-+...+.+-..++......|+..+++.... ...--.|+++||.+.+ +.+. + .....+|+ -+-.|..
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~~~--~------~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FDKQ--G------LYDHLVPD-LVLQGIR 250 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GTTT--T------CCSEECTT-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hccC--C------CCCEECcC-hHHHHHH
Confidence 4555666666777776666666666543211 1112379999999875 2222 1 11123555 6677877
Q ss_pred HHH
Q 009246 366 VQA 368 (539)
Q Consensus 366 ~~a 368 (539)
+..
T Consensus 251 ~i~ 253 (266)
T 3djc_A 251 LAA 253 (266)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 133
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=43.79 E-value=12 Score=31.93 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=15.4
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||.|+++++.++.
T Consensus 2 ~ILGIDPGl~~tG~gvi 18 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVI 18 (158)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred EEEEEccCCCCeeEEEE
Confidence 58999999999998876
No 134
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=42.40 E-value=13 Score=32.00 Aligned_cols=17 Identities=41% Similarity=0.431 Sum_probs=15.5
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||.|++.++.++.
T Consensus 2 rILGIDPGl~~tG~gvi 18 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVV 18 (166)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred EEEEEccccCceEEEEE
Confidence 58999999999999886
No 135
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=42.11 E-value=12 Score=38.52 Aligned_cols=16 Identities=50% Similarity=0.499 Sum_probs=14.6
Q ss_pred EEEEEcCccceeeeEE
Q 009246 9 AIGIDLGTTYSCVGVW 24 (539)
Q Consensus 9 vvGID~GTt~s~va~~ 24 (539)
++|||+|||+++++++
T Consensus 2 ~lgiDiGtt~~k~~l~ 17 (484)
T 2itm_A 2 YIGIDLGTSGVKVILL 17 (484)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEecCcccEEEEE
Confidence 6999999999998876
No 136
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=41.72 E-value=25 Score=26.53 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=25.7
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 009246 131 AVVTVPAYFNDSQRQATKDAGVIAGLNV 158 (539)
Q Consensus 131 ~VitVPa~~~~~qr~~l~~Aa~~aGl~~ 158 (539)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3789999999999999999999999864
No 137
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=40.75 E-value=12 Score=38.54 Aligned_cols=17 Identities=41% Similarity=0.387 Sum_probs=15.5
Q ss_pred CEEEEEcCccceeeeEE
Q 009246 8 PAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (539)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtts~k~~l~ 19 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVF 19 (504)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCcceEEEEE
Confidence 58999999999998876
No 138
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=38.99 E-value=14 Score=38.99 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=24.8
Q ss_pred CCCEEEEEcCccceeeeEE------ecceEEEec
Q 009246 6 EGPAIGIDLGTTYSCVGVW------TTPSYVGFT 33 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~------~~Ps~v~~~ 33 (539)
...+|-|.-|+.|..++.+ .+|.+|+..
T Consensus 39 ~~~~IVIHpGS~~lRIG~AsD~~P~~ip~~iA~~ 72 (655)
T 4am6_A 39 PTATIVIHPGSNSIKIGFPKDDHPVVVPNCVAVP 72 (655)
T ss_dssp GGGEEEEECCSSEEEEECTTSSSCEEEESCEEEE
T ss_pred CCCeEEEcCCCcceeeeecCCCCCcccceeEEec
Confidence 4668999999999999988 889999975
No 139
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=38.49 E-value=96 Score=31.46 Aligned_cols=25 Identities=40% Similarity=0.682 Sum_probs=21.5
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeCC
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEEG 206 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~ 206 (539)
....+|.+|+||.+|-|.++++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 4567999999999999999999764
No 140
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=38.25 E-value=44 Score=31.73 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC
Q 009246 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (539)
Q Consensus 295 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (539)
++++...+.+.+.++++|+++++++++|+.|+.-|++.++ -+.+.+.|+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3444556678889999999999999999999999988774 557778774
No 141
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=37.70 E-value=1.3e+02 Score=31.86 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=62.7
Q ss_pred CeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC--CCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 009246 183 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT--HLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACER 260 (539)
Q Consensus 183 ~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~--~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~ 260 (539)
..+=+.+|+|..|+-..++.+..+..--..+..+. ..|.+-+++.-+. . +
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a-~-~-------------------------- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYV-D-E-------------------------- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHH-H-H--------------------------
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHH-h-c--------------------------
Confidence 34568999999999999999887755333333333 4666655543221 1 0
Q ss_pred HhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCc
Q 009246 261 AKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRI 334 (539)
Q Consensus 261 ~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~ 334 (539)
+..-++++-+-+++.+.+++.+.++++++++.+|..+.++|-.+..
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~ 302 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMT 302 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHH
Confidence 0011233344456777788888888999999999999999865543
No 142
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=37.36 E-value=3.9 Score=38.91 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCC--ccccccCCCchhhHhHHHHHH
Q 009246 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNG--KELCKNINPDEAVAYGAAVQA 368 (539)
Q Consensus 299 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~--~~v~~~~~p~~aVa~GAa~~a 368 (539)
.++++..+.+-..+ ..... .+.+.|+|.||.+.. +.+.|++.+.. .++. .+..+.+.||++++
T Consensus 212 ~i~~~~~~~La~~i-~~~~~-~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la 276 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQYD-YKQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYH 276 (291)
T ss_dssp HHHHHHHHHHHTTT-GGGSC-TTTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTS
T ss_pred HHHHHHHHHHHHHH-hcccC-CCCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHH
Confidence 44444444444444 22211 145689999998775 56666666632 1222 34568889999875
No 143
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=33.02 E-value=55 Score=31.43 Aligned_cols=46 Identities=15% Similarity=0.075 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
++-..+.+.+.++++|+++++++.+|+.|+.-|++.++ -+.+.+.|
T Consensus 226 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 226 FRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 33455677788999999999999999999999988763 45677777
No 144
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=32.77 E-value=56 Score=31.02 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC
Q 009246 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (539)
Q Consensus 296 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (539)
+++-..+.+...++++|+++++++++|+.|+.-|++.++ -+.+.+.|+
T Consensus 214 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 214 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344456677888999999999999999999999988764 456777773
No 145
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=32.45 E-value=60 Score=31.02 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
++-..+.+.+.++++|+++++++.+|+.+++-+++.++ -+.+.+.|
T Consensus 219 ~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 219 FGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 34455677788999999999999999999999988774 45577777
No 146
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=31.16 E-value=69 Score=30.17 Aligned_cols=47 Identities=9% Similarity=0.071 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (539)
.+...+.+...++++|+++++++.+|+.+++-++++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 253 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 44455677888999999999999999999999988764 455667773
No 147
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=30.47 E-value=23 Score=36.75 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=31.4
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCceeEee-chhHHHHHhc
Q 009246 130 NAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII-NEPTAAAIAY 172 (539)
Q Consensus 130 ~~VitVPa~~~~~qr~~l~~Aa~~aGl~~~~li-~Ep~Aaa~~~ 172 (539)
.++.-+|..++...-.++.+++...|++....+ .--.+..+..
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~n 175 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNN 175 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHT
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcc
Confidence 455559999999999999999999999775433 3334444443
No 148
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=29.63 E-value=68 Score=30.11 Aligned_cols=46 Identities=22% Similarity=0.182 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhC
Q 009246 298 MDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (539)
Q Consensus 298 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (539)
+...+.+.+.++++|+++++++.+|+.+++-|+++++ -+.+.+.|+
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 3455677788999999999999999999999988774 356777773
No 149
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.82 E-value=1.8e+02 Score=29.28 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=21.3
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeC
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEE 205 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~ 205 (539)
....++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 346799999999999999999976
No 150
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=28.47 E-value=66 Score=30.97 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=24.9
Q ss_pred EeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 160 RIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 160 ~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
....-|.|.|........ ...+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~~------~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNIE------ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHTC------SSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhcC------CCEEEEEcCcchhhhhhhc
Confidence 344567777663222211 2369999999999999887
No 151
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=28.24 E-value=1.3e+02 Score=28.54 Aligned_cols=49 Identities=31% Similarity=0.434 Sum_probs=31.4
Q ss_pred HcCCceeEeechhHHHHHhccccc--------ccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 153 IAGLNVMRIINEPTAAAIAYGLDK--------KATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~--------~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
..|++.+.+.|+-.|+|++-.... .......++++++-+|.| +-..++.
T Consensus 100 ~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG-iG~giv~ 156 (332)
T 1sz2_A 100 NLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG-LGVAHLV 156 (332)
T ss_dssp HHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS-EEEEEEE
T ss_pred HhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc-ceEEEEe
Confidence 348887899999999998653321 000123456888889988 3444444
No 152
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=28.09 E-value=67 Score=31.87 Aligned_cols=45 Identities=9% Similarity=-0.010 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCc-CcHHHHHHHHhhh
Q 009246 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFF 345 (539)
Q Consensus 297 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (539)
++-.+.++...|-...... ..+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 3444555555555554443 3589999999999 9999999998754
No 153
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=27.74 E-value=29 Score=32.66 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=36.4
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceE
Q 009246 127 TIKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTF 196 (539)
Q Consensus 127 ~~~~~VitVPa~~~~~qr~~l~~Aa~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~ 196 (539)
.+..+.|++|..- ......+++..+ ..++ ..+.+.|.-.||++.-. . ....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g-----~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---G-----DSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---T-----TSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---C-----CCCcEEEEecCChh
Confidence 4567889999874 222234444443 3454 36889999999998632 1 12334444677764
No 154
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=27.54 E-value=1.7e+02 Score=29.28 Aligned_cols=30 Identities=30% Similarity=0.628 Sum_probs=24.4
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeCCEEEEEE
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKA 212 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~ 212 (539)
+...+|.+|+||.++-|.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 4457999999999999999999766 55444
No 155
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.72 E-value=97 Score=29.46 Aligned_cols=45 Identities=16% Similarity=0.075 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 298 MDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 298 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
+.....+...++++|+++++++.+|+.+++-++++++ -+.+.+.|
T Consensus 228 ~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~l 272 (335)
T 1u6e_A 228 RWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHc
Confidence 3445677788999999999999999999999988874 34456666
No 156
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=24.67 E-value=29 Score=33.06 Aligned_cols=43 Identities=12% Similarity=0.127 Sum_probs=26.5
Q ss_pred cCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEE
Q 009246 154 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (539)
Q Consensus 154 aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (539)
.|++ +.+.|+-.|||++...... ....+++++-+|.| .-..++
T Consensus 107 ~~~p-v~v~NDanaaa~~e~~~~~---~~~~~~~~v~~GtG-iG~gii 149 (310)
T 3htv_A 107 LNCP-VEFSRDVNLQLSWDVVENR---LTQQLVLAAYLGTG-MGFAVW 149 (310)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHTT---CTTSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEeeHHHHHHHHHHhhcc---cCCceEEEEEecee-EEEEEE
Confidence 4775 6899999999875432221 13456777778865 344444
No 157
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=23.83 E-value=28 Score=32.81 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=32.7
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCce
Q 009246 128 IKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGT 195 (539)
Q Consensus 128 ~~~~VitVPa~~~~~qr~~l~~Aa~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT 195 (539)
+..+.|++|..- ......+++..+ ..++ ..+.+.|.-.||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g-----~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G-----QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T-----TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C-----CCCcEEEEeCCCh
Confidence 345788898764 222223444333 3454 36889999999998542 1 1223444478776
No 158
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=23.13 E-value=2.6e+02 Score=21.59 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=40.5
Q ss_pred CCCcCc-eeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEEEEecCCeeEEEE
Q 009246 408 NTTIPT-KKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVS 480 (539)
Q Consensus 408 ~~~iP~-~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~~~~d~~g~l~v~ 480 (539)
++.=|. ..+..|.........+.+.+|.-+.. .+..||.+.|. +.....+. .....+.+...|...+.
T Consensus 50 ~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~---~~~~iG~~~i~-l~~l~~~~-~~~~~~~L~~~~~g~i~ 118 (126)
T 1rlw_A 50 NDINPVWNETFEFILDPNQENVLEITLMDANYV---MDETLGTATFT-VSSMKVGE-KKEVPFIFNQVTEMVLE 118 (126)
T ss_dssp TCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS---CCEEEEEEEEE-GGGSCTTC-EEEEEEEETTTEEEEEE
T ss_pred CCCCCcccceEEEEecCCCCCEEEEEEEECCCC---CCceeEEEEEE-HHHccCCC-cEEEEEEcCCCceEEEE
Confidence 344454 34455555334456789999975543 36689999887 55444443 35667777765544443
No 159
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.32 E-value=1.3e+02 Score=28.99 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHH
Q 009246 298 MDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLL 341 (539)
Q Consensus 298 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l 341 (539)
+...+.+...|+.+|++++++..+||.|..+-|-...+.++--+
T Consensus 50 ~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 50 VHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 44566778899999999999999999999999888877776544
No 160
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=22.23 E-value=92 Score=30.61 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 298 MDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 298 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
+...+.+...++++|++++++.++|+.+++-+++.++ -+.+.+.+
T Consensus 283 ~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~l 327 (393)
T 1ted_A 283 GYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHc
Confidence 3456677788999999999999999999998888764 45566666
No 161
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=22.07 E-value=44 Score=31.16 Aligned_cols=72 Identities=13% Similarity=0.199 Sum_probs=39.9
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHH
Q 009246 288 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (539)
Q Consensus 288 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~ 367 (539)
+-+...+.+-..++......|+..+++.......--.|+++||.+.+ + ...++. ....+|+ -+-.|..+.
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~~--l----~~~~~~---~~~~~~~-LvL~GL~~i 249 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAKL--I----SEESNV---IDVVDPF-LTLKGLYML 249 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHHH--H----HHHCSS---CSEECTT-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHHH--H----HhhCCC---CCEECcc-hHHHHHHHH
Confidence 34555666666666666666665555432111112379999998764 3 334421 1223554 556787766
Q ss_pred HH
Q 009246 368 AA 369 (539)
Q Consensus 368 a~ 369 (539)
..
T Consensus 250 ~~ 251 (268)
T 2h3g_X 250 YE 251 (268)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 162
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=21.99 E-value=79 Score=28.91 Aligned_cols=54 Identities=20% Similarity=0.195 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHH
Q 009246 301 FRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAA 365 (539)
Q Consensus 301 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa 365 (539)
.+.+.+.+.+.+++. .+|.|+| |++.+|++.+.|++.++ .++ +||-.++++=+.
T Consensus 159 ~~~l~~~~~~~~~~~-----gad~IVL--GCTh~p~l~~~i~~~~g-Vpv---ID~~~a~~~~~~ 212 (245)
T 3qvl_A 159 QEKVRERCIRALKED-----GSGAIVL--GSGGMATLAQQLTRELR-VPV---IDGVSAAVKMVE 212 (245)
T ss_dssp HHHHHHHHHHHHHHS-----CCSEEEE--CCGGGGGGHHHHHHHHT-SCE---ECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-----CCCEEEE--CCCChHHHHHHHHHHcC-CeE---EccHHHHHHHHH
Confidence 344444444555443 3667776 67899999999999994 433 466666554443
No 163
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=21.88 E-value=1.3e+02 Score=28.65 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhh
Q 009246 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (539)
Q Consensus 296 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (539)
+++...+.+.+.++++|++++++.++|+.+++-.++.+ +-+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 44556677788899999999999999999999888776 446666666
No 164
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=21.64 E-value=2.1e+02 Score=26.87 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=33.2
Q ss_pred CCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHH
Q 009246 182 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQ 234 (539)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 234 (539)
.+..++.+|+||..+.+.++......+......... .+...+-+.+.+.+.+
T Consensus 22 ~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~-~~~~~~~~~i~~~i~~ 73 (327)
T 2ap1_A 22 SNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH-TSYSAFLDAVCELVEE 73 (327)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC-SCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC-CCHHHHHHHHHHHHHH
Confidence 345789999999999999998765544333333322 2556666666666544
No 165
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=21.17 E-value=80 Score=29.00 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=29.6
Q ss_pred cceEEEeCCCcCc-HHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHH
Q 009246 322 VHDVVLVGGSTRI-PKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (539)
Q Consensus 322 i~~ViLvGG~s~~-p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~ 371 (539)
.+.|+|-||.+.. +.+.+.++ ...++....-.+.+.+.|||.++...
T Consensus 215 P~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 5679999988764 33333332 12344444455678999999887543
No 166
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.15 E-value=68 Score=32.39 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHHHcCCce--eEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 140 NDSQRQATKDAGVIAGLNV--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 140 ~~~qr~~l~~Aa~~aGl~~--~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
...-.+.+++|....|+++ +.++|...|++++..... ...++-+=+|-|+=-.-+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC------CCcEEEEEEeCCcceEEEEc
Confidence 4456788888888778863 589999999998765442 23567777788754444443
No 167
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=21.10 E-value=38 Score=30.70 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=27.8
Q ss_pred HcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEE
Q 009246 153 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (539)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (539)
..|++ +.+.|+..|||++.... .+++++-+|.| .-.+++.
T Consensus 90 ~~~~p-v~v~NDanaaalge~~~--------~~~~~l~~GtG-iG~gii~ 129 (226)
T 3lm2_A 90 AFGRP-VRIVNDALMQAIGSYNG--------GRMLFLGLGTG-LGAAMIV 129 (226)
T ss_dssp HHTSC-EEEEEHHHHHHHHHCCS--------SEEEEEEESSS-EEEEEEE
T ss_pred hcCCe-EEEEEHHHHHHHHHhhc--------CcEEEEEeCCc-eEEEEEE
Confidence 34765 67999999999865322 36788888877 5555554
No 168
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=20.91 E-value=40 Score=32.38 Aligned_cols=19 Identities=21% Similarity=0.146 Sum_probs=15.9
Q ss_pred CCCEEEEEcCccceeeeEE
Q 009246 6 EGPAIGIDLGTTYSCVGVW 24 (539)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (539)
+..++|||+|.|+++++++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~ 31 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALC 31 (332)
T ss_dssp -CEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEechhheEEEEE
Confidence 5679999999999998764
No 169
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=20.70 E-value=1.2e+02 Score=28.22 Aligned_cols=44 Identities=23% Similarity=0.468 Sum_probs=33.2
Q ss_pred CCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHH
Q 009246 320 STVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (539)
Q Consensus 320 ~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~ 367 (539)
..+|.|+| |++.+|++.+.+++.++. .+ .-+||.+++|+-+.-+
T Consensus 177 ~g~D~iVL--GCTh~pll~~~i~~~~~~-~v-~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 177 TKIDTVIL--GCTHYPLLKPIIENFMGD-GV-AVINSGEETASEVSAL 220 (269)
T ss_dssp SCCCEEEE--CSTTGGGGHHHHHHHHCT-TS-EEECTHHHHHHHHHHH
T ss_pred CCCCEEEE--CCCCHHHHHHHHHHHcCC-CC-eEECcHHHHHHHHHHH
Confidence 35777777 899999999999999852 22 3358888888877654
No 170
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.59 E-value=2.4e+02 Score=26.36 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=21.1
Q ss_pred eEEEEEEeCCceEEEEEEEEeCCEEE
Q 009246 184 KNVLIFDLGGGTFDVSLLTIEEGIFE 209 (539)
Q Consensus 184 ~~vlV~D~GggT~Dvsv~~~~~~~~~ 209 (539)
..++.+|+|+..+.+.++......+.
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~ 31 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQ 31 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEE
Confidence 47899999999999999987654443
No 171
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=20.26 E-value=1.4e+02 Score=26.84 Aligned_cols=47 Identities=23% Similarity=0.216 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHh
Q 009246 292 RFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQD 343 (539)
Q Consensus 292 ~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~ 343 (539)
+-+++.+.+.+.+.+.+.+.+++.+ --.+.|.||+|-.+..+...+.
T Consensus 9 ~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~~ 55 (226)
T 3lwd_A 9 GRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAAK 55 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhc
Confidence 4455556666666666666665432 3478999999999998888764
Done!