Query 009247
Match_columns 539
No_of_seqs 387 out of 1881
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:10:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vg0_A RAB proteins geranylger 100.0 9.6E-72 3.3E-76 602.4 50.1 466 20-530 6-612 (650)
2 3p1w_A Rabgdi protein; GDI RAB 100.0 7.3E-63 2.5E-67 519.8 43.8 435 19-523 17-464 (475)
3 2bcg_G Secretory pathway GDP d 100.0 8E-48 2.7E-52 408.8 45.0 432 20-521 9-446 (453)
4 1d5t_A Guanine nucleotide diss 100.0 7.3E-46 2.5E-50 391.3 42.3 422 20-517 4-430 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 9.8E-31 3.4E-35 280.9 32.5 342 23-426 2-377 (501)
6 3ka7_A Oxidoreductase; structu 99.9 1.5E-24 5E-29 227.7 35.5 391 23-515 1-425 (425)
7 3nrn_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 228.5 32.3 383 23-513 1-403 (421)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 5.9E-24 2E-28 226.7 30.2 407 21-516 15-472 (478)
9 3i6d_A Protoporphyrinogen oxid 99.9 7.4E-23 2.5E-27 217.3 29.2 403 22-515 5-466 (470)
10 3lov_A Protoporphyrinogen oxid 99.9 3.1E-22 1E-26 213.3 32.7 412 20-517 2-465 (475)
11 3nks_A Protoporphyrinogen oxid 99.9 7.5E-23 2.6E-27 218.0 27.6 413 23-517 3-474 (477)
12 1sez_A Protoporphyrinogen oxid 99.9 6.7E-22 2.3E-26 212.3 32.2 419 21-515 12-491 (504)
13 1s3e_A Amine oxidase [flavin-c 99.9 1.3E-21 4.4E-26 211.0 34.4 295 21-377 3-306 (520)
14 2yg5_A Putrescine oxidase; oxi 99.9 1.2E-21 4E-26 207.4 28.4 292 20-376 3-305 (453)
15 4gde_A UDP-galactopyranose mut 99.9 2.9E-22 9.8E-27 215.4 19.9 243 22-333 10-271 (513)
16 2vvm_A Monoamine oxidase N; FA 99.9 2.4E-21 8.1E-26 207.5 26.9 295 23-376 40-349 (495)
17 4dsg_A UDP-galactopyranose mut 99.9 3.1E-20 1.1E-24 198.2 23.7 397 21-514 8-452 (484)
18 1rsg_A FMS1 protein; FAD bindi 99.8 1.3E-18 4.4E-23 187.3 14.2 278 20-378 6-307 (516)
19 1b37_A Protein (polyamine oxid 99.7 8.1E-17 2.8E-21 171.3 21.2 409 21-515 3-456 (472)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.7 1.5E-16 5E-21 167.0 20.8 283 23-376 2-296 (431)
21 2b9w_A Putative aminooxidase; 99.7 1.7E-16 5.8E-21 166.2 19.2 247 21-333 5-253 (424)
22 2iid_A L-amino-acid oxidase; f 99.7 4.5E-16 1.5E-20 166.6 20.9 284 21-376 32-335 (498)
23 3hdq_A UDP-galactopyranose mut 99.7 2.1E-15 7.3E-20 155.6 24.6 348 19-517 26-391 (397)
24 2jae_A L-amino acid oxidase; o 99.7 3.1E-16 1E-20 167.5 16.3 300 20-376 9-331 (489)
25 4gut_A Lysine-specific histone 99.6 1.7E-13 5.7E-18 153.1 27.1 225 271-515 526-775 (776)
26 1v0j_A UDP-galactopyranose mut 99.6 4.9E-16 1.7E-20 161.6 5.8 300 21-424 6-317 (399)
27 2e1m_A L-glutamate oxidase; L- 99.6 4E-14 1.4E-18 144.9 19.8 47 20-66 42-89 (376)
28 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 4.5E-13 1.5E-17 136.0 26.4 215 272-515 105-340 (342)
29 1i8t_A UDP-galactopyranose mut 99.6 2E-15 6.9E-20 155.1 7.8 226 22-333 1-230 (367)
30 2bi7_A UDP-galactopyranose mut 99.5 1.2E-14 3.9E-19 150.4 10.4 213 21-305 2-223 (384)
31 2z3y_A Lysine-specific histone 99.5 5.9E-12 2E-16 139.1 30.2 100 271-378 393-501 (662)
32 2xag_A Lysine-specific histone 99.4 3.4E-12 1.2E-16 143.4 20.4 101 270-378 563-672 (852)
33 1yvv_A Amine oxidase, flavin-c 99.4 3.4E-10 1.2E-14 114.0 27.7 207 273-516 104-326 (336)
34 3ayj_A Pro-enzyme of L-phenyla 99.4 2E-12 6.8E-17 141.7 11.6 61 271-333 339-409 (721)
35 3dme_A Conserved exported prot 99.1 1.8E-10 6.3E-15 117.3 12.7 61 271-333 139-204 (369)
36 3dje_A Fructosyl amine: oxygen 99.1 1.1E-09 3.7E-14 114.9 18.2 60 271-332 149-215 (438)
37 3ps9_A TRNA 5-methylaminomethy 99.0 2.6E-09 9E-14 118.3 15.9 59 271-332 406-467 (676)
38 3kkj_A Amine oxidase, flavin-c 99.0 1.9E-10 6.4E-15 110.8 5.2 44 23-66 3-46 (336)
39 3nyc_A D-arginine dehydrogenas 99.0 2.9E-09 9.8E-14 109.0 14.2 59 271-333 143-204 (381)
40 4at0_A 3-ketosteroid-delta4-5a 99.0 1.5E-08 5E-13 108.5 18.3 42 21-62 40-81 (510)
41 3pvc_A TRNA 5-methylaminomethy 98.9 7.1E-09 2.4E-13 115.1 15.6 59 271-332 401-463 (689)
42 3v76_A Flavoprotein; structura 98.9 4E-09 1.4E-13 109.8 11.3 62 271-336 124-186 (417)
43 2gag_B Heterotetrameric sarcos 98.9 1.9E-08 6.5E-13 103.9 16.1 60 271-333 163-225 (405)
44 1y0p_A Fumarate reductase flav 98.9 7.9E-08 2.7E-12 104.3 20.6 53 279-332 255-311 (571)
45 2i0z_A NAD(FAD)-utilizing dehy 98.9 7.8E-09 2.7E-13 108.8 12.0 60 271-332 125-185 (447)
46 1qo8_A Flavocytochrome C3 fuma 98.9 5.4E-08 1.8E-12 105.5 18.9 59 272-332 240-306 (566)
47 1y56_B Sarcosine oxidase; dehy 98.9 2.8E-08 9.6E-13 101.9 15.9 60 271-333 138-200 (382)
48 3nlc_A Uncharacterized protein 98.8 2.7E-08 9.4E-13 106.6 12.7 53 279-333 220-272 (549)
49 1pj5_A N,N-dimethylglycine oxi 98.8 6.8E-08 2.3E-12 109.5 16.2 60 271-333 140-202 (830)
50 3oz2_A Digeranylgeranylglycero 98.7 5.2E-09 1.8E-13 107.4 5.0 41 20-60 2-42 (397)
51 1d4d_A Flavocytochrome C fumar 98.6 1.2E-06 4.3E-11 94.8 18.9 52 279-332 255-311 (572)
52 4fk1_A Putative thioredoxin re 98.6 4E-08 1.4E-12 97.7 5.2 42 18-60 2-43 (304)
53 3fpz_A Thiazole biosynthetic e 98.5 3.9E-08 1.3E-12 98.9 4.9 42 22-63 65-108 (326)
54 1ryi_A Glycine oxidase; flavop 98.5 7.4E-08 2.5E-12 98.6 5.6 51 9-59 4-54 (382)
55 3itj_A Thioredoxin reductase 1 98.5 6.6E-08 2.3E-12 97.0 4.8 59 6-64 6-68 (338)
56 3lxd_A FAD-dependent pyridine 98.4 2E-06 6.9E-11 89.3 14.9 57 278-336 193-249 (415)
57 4gcm_A TRXR, thioredoxin reduc 98.4 1.2E-07 4.3E-12 94.3 5.3 41 21-62 5-45 (312)
58 3fg2_P Putative rubredoxin red 98.4 4.8E-06 1.6E-10 86.1 16.9 57 277-335 182-238 (404)
59 3cgv_A Geranylgeranyl reductas 98.4 1.5E-07 5E-12 96.8 5.0 42 20-61 2-43 (397)
60 3rp8_A Flavoprotein monooxygen 98.4 1.5E-07 5.1E-12 97.5 4.9 48 12-59 13-60 (407)
61 4a9w_A Monooxygenase; baeyer-v 98.4 2.1E-07 7E-12 93.9 5.2 44 20-63 1-44 (357)
62 3cty_A Thioredoxin reductase; 98.4 2.6E-07 8.9E-12 92.2 5.3 43 20-63 14-56 (319)
63 2gqf_A Hypothetical protein HI 98.3 1.9E-07 6.5E-12 96.7 3.9 43 20-62 2-44 (401)
64 3urh_A Dihydrolipoyl dehydroge 98.3 2.4E-07 8.1E-12 98.6 4.3 44 20-63 23-66 (491)
65 2oln_A NIKD protein; flavoprot 98.3 3.6E-07 1.2E-11 94.1 5.5 58 271-332 142-202 (397)
66 3o0h_A Glutathione reductase; 98.3 2.8E-07 9.5E-12 97.9 4.3 53 279-334 232-284 (484)
67 4a5l_A Thioredoxin reductase; 98.3 3.4E-07 1.2E-11 90.9 4.7 36 21-56 3-38 (314)
68 2zbw_A Thioredoxin reductase; 98.3 3.2E-07 1.1E-11 92.1 4.4 44 20-63 3-46 (335)
69 1rp0_A ARA6, thiazole biosynth 98.3 3.8E-07 1.3E-11 89.8 4.8 41 21-61 38-79 (284)
70 3l8k_A Dihydrolipoyl dehydroge 98.3 3E-07 1E-11 97.2 4.2 43 21-63 3-45 (466)
71 3ab1_A Ferredoxin--NADP reduct 98.3 3.3E-07 1.1E-11 93.1 4.4 45 19-63 11-55 (360)
72 3da1_A Glycerol-3-phosphate de 98.3 4.1E-07 1.4E-11 98.3 5.2 60 271-332 160-226 (561)
73 3c96_A Flavin-containing monoo 98.3 5.3E-07 1.8E-11 93.5 5.2 43 20-62 2-45 (410)
74 2gjc_A Thiazole biosynthetic e 98.3 7.5E-07 2.6E-11 88.8 6.0 40 22-61 65-106 (326)
75 2uzz_A N-methyl-L-tryptophan o 98.3 5.6E-07 1.9E-11 91.7 5.2 58 271-332 138-198 (372)
76 4ap3_A Steroid monooxygenase; 98.3 4.4E-07 1.5E-11 97.7 4.4 47 19-65 18-64 (549)
77 3k30_A Histamine dehydrogenase 98.2 8.6E-07 2.9E-11 98.3 6.5 60 3-63 373-432 (690)
78 1c0p_A D-amino acid oxidase; a 98.2 8.6E-07 3E-11 90.2 6.0 39 21-59 5-43 (363)
79 3jsk_A Cypbp37 protein; octame 98.2 7.1E-07 2.4E-11 89.5 5.0 40 22-61 79-120 (344)
80 2gv8_A Monooxygenase; FMO, FAD 98.2 9.5E-07 3.3E-11 92.7 6.1 43 21-63 5-49 (447)
81 3i3l_A Alkylhalidase CMLS; fla 98.2 9.4E-07 3.2E-11 95.9 6.2 52 279-332 128-182 (591)
82 2qcu_A Aerobic glycerol-3-phos 98.2 8.6E-07 3E-11 94.5 5.7 51 279-332 149-204 (501)
83 3lzw_A Ferredoxin--NADP reduct 98.2 5.9E-07 2E-11 89.7 4.1 42 21-62 6-47 (332)
84 3f8d_A Thioredoxin reductase ( 98.2 8.5E-07 2.9E-11 88.1 5.3 40 22-63 15-54 (323)
85 3nix_A Flavoprotein/dehydrogen 98.2 8.8E-07 3E-11 91.9 5.5 53 279-332 106-160 (421)
86 2xdo_A TETX2 protein; tetracyc 98.2 1E-06 3.5E-11 90.9 5.8 41 20-60 24-64 (398)
87 2gf3_A MSOX, monomeric sarcosi 98.2 1E-06 3.5E-11 90.2 5.7 51 279-333 150-200 (389)
88 3alj_A 2-methyl-3-hydroxypyrid 98.2 1E-06 3.5E-11 90.3 5.6 41 20-60 9-49 (379)
89 3c4n_A Uncharacterized protein 98.2 8.1E-07 2.8E-11 92.0 4.9 40 21-60 35-76 (405)
90 4dna_A Probable glutathione re 98.2 6.8E-07 2.3E-11 94.3 4.3 53 279-334 211-264 (463)
91 1w4x_A Phenylacetone monooxyge 98.2 1E-06 3.6E-11 94.8 5.6 45 19-63 13-57 (542)
92 2cul_A Glucose-inhibited divis 98.2 1.1E-06 3.7E-11 83.8 4.9 36 20-55 1-36 (232)
93 2q7v_A Thioredoxin reductase; 98.2 1.1E-06 3.8E-11 87.8 5.1 43 20-63 6-48 (325)
94 3d1c_A Flavin-containing putat 98.2 8.4E-07 2.9E-11 90.2 4.2 43 20-63 2-45 (369)
95 3lad_A Dihydrolipoamide dehydr 98.2 1.1E-06 3.7E-11 93.1 5.2 41 21-61 2-42 (476)
96 1mo9_A ORF3; nucleotide bindin 98.2 1.4E-06 4.7E-11 93.5 6.0 45 19-63 40-84 (523)
97 2vou_A 2,6-dihydroxypyridine h 98.2 1.5E-06 5E-11 89.7 5.8 38 20-57 3-40 (397)
98 3axb_A Putative oxidoreductase 98.2 9.9E-07 3.4E-11 92.5 4.6 60 271-333 170-249 (448)
99 3dk9_A Grase, GR, glutathione 98.2 7.8E-07 2.7E-11 94.2 3.7 44 19-63 17-60 (478)
100 2vdc_G Glutamate synthase [NAD 98.2 1.6E-06 5.5E-11 91.1 6.0 43 20-62 120-162 (456)
101 3r9u_A Thioredoxin reductase; 98.1 1.2E-06 4.1E-11 86.8 4.5 42 21-63 3-45 (315)
102 3pl8_A Pyranose 2-oxidase; sub 98.1 1.6E-06 5.6E-11 94.7 5.8 43 21-63 45-87 (623)
103 1v59_A Dihydrolipoamide dehydr 98.1 8E-07 2.7E-11 94.1 3.2 44 20-63 3-46 (478)
104 3qfa_A Thioredoxin reductase 1 98.1 1.6E-06 5.4E-11 92.8 5.2 43 21-63 31-81 (519)
105 1dxl_A Dihydrolipoamide dehydr 98.1 1.5E-06 5.1E-11 91.8 5.0 44 20-63 4-47 (470)
106 2a87_A TRXR, TR, thioredoxin r 98.1 1.5E-06 5.2E-11 87.3 4.7 44 19-63 11-54 (335)
107 3gwf_A Cyclohexanone monooxyge 98.1 1.2E-06 4.3E-11 94.0 4.3 46 20-65 6-52 (540)
108 2qae_A Lipoamide, dihydrolipoy 98.1 1.3E-06 4.4E-11 92.3 4.4 42 22-63 2-43 (468)
109 1zmd_A Dihydrolipoyl dehydroge 98.1 1.3E-06 4.4E-11 92.4 4.2 44 20-63 4-47 (474)
110 1ojt_A Surface protein; redox- 98.1 1.1E-06 3.9E-11 93.1 3.6 43 21-63 5-47 (482)
111 3uox_A Otemo; baeyer-villiger 98.1 1.8E-06 6.1E-11 92.9 5.1 47 20-66 7-53 (545)
112 3dgz_A Thioredoxin reductase 2 98.1 1.8E-06 6.1E-11 91.7 5.0 43 21-63 5-55 (488)
113 2wdq_A Succinate dehydrogenase 98.1 1.6E-06 5.4E-11 94.2 4.7 53 279-332 143-200 (588)
114 2yqu_A 2-oxoglutarate dehydrog 98.1 1.5E-06 5E-11 91.5 4.2 42 22-63 1-42 (455)
115 2x3n_A Probable FAD-dependent 98.1 2.3E-06 8E-11 88.1 5.5 52 279-332 107-160 (399)
116 2a8x_A Dihydrolipoyl dehydroge 98.1 1.4E-06 4.9E-11 91.8 4.0 43 20-63 1-43 (464)
117 3e1t_A Halogenase; flavoprotei 98.1 2.2E-06 7.5E-11 91.6 5.4 52 279-332 111-166 (512)
118 3ic9_A Dihydrolipoamide dehydr 98.1 1.4E-06 4.6E-11 92.7 3.8 40 22-62 8-47 (492)
119 3atr_A Conserved archaeal prot 98.1 1.4E-06 4.6E-11 91.7 3.5 51 280-332 101-156 (453)
120 2rgh_A Alpha-glycerophosphate 98.1 2.6E-06 8.9E-11 92.2 5.8 60 271-332 178-244 (571)
121 2qa1_A PGAE, polyketide oxygen 98.1 2.8E-06 9.5E-11 90.5 5.8 41 19-59 8-48 (500)
122 3ihg_A RDME; flavoenzyme, anth 98.1 3.2E-06 1.1E-10 90.8 6.3 39 21-59 4-42 (535)
123 1vdc_A NTR, NADPH dependent th 98.1 1.7E-06 5.9E-11 86.6 3.8 44 20-63 6-53 (333)
124 1trb_A Thioredoxin reductase; 98.1 1.8E-06 6.2E-11 85.8 4.0 42 20-62 3-44 (320)
125 1zk7_A HGII, reductase, mercur 98.1 2.2E-06 7.4E-11 90.5 4.7 43 20-63 2-44 (467)
126 2r0c_A REBC; flavin adenine di 98.1 2.6E-06 9E-11 91.8 5.4 42 21-62 25-66 (549)
127 2bs2_A Quinol-fumarate reducta 98.1 2.1E-06 7.3E-11 94.2 4.7 52 279-332 158-214 (660)
128 2gmh_A Electron transfer flavo 98.0 2.5E-06 8.4E-11 92.7 5.0 40 22-61 35-80 (584)
129 2r9z_A Glutathione amide reduc 98.0 2.1E-06 7.2E-11 90.6 4.3 51 280-333 208-259 (463)
130 2hqm_A GR, grase, glutathione 98.0 1.9E-06 6.7E-11 91.2 4.0 54 279-333 226-280 (479)
131 2bry_A NEDD9 interacting prote 98.0 3.4E-06 1.2E-10 89.7 5.9 41 20-60 90-130 (497)
132 3dgh_A TRXR-1, thioredoxin red 98.0 2.9E-06 9.8E-11 90.0 5.2 54 279-334 227-285 (483)
133 2q0l_A TRXR, thioredoxin reduc 98.0 3.4E-06 1.2E-10 83.5 5.4 40 23-63 2-42 (311)
134 1ges_A Glutathione reductase; 98.0 2.2E-06 7.4E-11 90.1 4.0 53 280-334 209-261 (450)
135 1chu_A Protein (L-aspartate ox 98.0 2.9E-06 9.9E-11 91.2 5.0 41 20-61 6-46 (540)
136 3g3e_A D-amino-acid oxidase; F 98.0 2.1E-06 7.2E-11 86.8 3.7 37 23-59 1-43 (351)
137 3fmw_A Oxygenase; mithramycin, 98.0 3.7E-06 1.3E-10 90.9 5.9 38 21-58 48-85 (570)
138 4hb9_A Similarities with proba 98.0 3.9E-06 1.3E-10 86.3 5.3 35 23-57 2-36 (412)
139 2eq6_A Pyruvate dehydrogenase 98.0 2.5E-06 8.6E-11 90.0 4.0 43 20-63 4-46 (464)
140 2h88_A Succinate dehydrogenase 98.0 3.3E-06 1.1E-10 92.0 4.7 52 279-332 155-211 (621)
141 1k0i_A P-hydroxybenzoate hydro 98.0 3.2E-06 1.1E-10 86.9 4.4 35 22-56 2-36 (394)
142 2qa2_A CABE, polyketide oxygen 98.0 4.4E-06 1.5E-10 88.9 5.4 39 21-59 11-49 (499)
143 3fbs_A Oxidoreductase; structu 98.0 4.4E-06 1.5E-10 81.9 4.9 38 23-60 3-40 (297)
144 1fec_A Trypanothione reductase 98.0 3.3E-06 1.1E-10 89.7 4.2 54 279-334 231-284 (490)
145 2xve_A Flavin-containing monoo 98.0 4.9E-06 1.7E-10 87.7 5.3 42 23-64 3-50 (464)
146 2wpf_A Trypanothione reductase 98.0 3.1E-06 1.1E-10 90.0 3.7 54 279-334 235-288 (495)
147 1o94_A Tmadh, trimethylamine d 98.0 5.6E-06 1.9E-10 92.3 5.8 44 20-63 387-430 (729)
148 1ebd_A E3BD, dihydrolipoamide 97.9 3.7E-06 1.3E-10 88.4 4.0 41 22-63 3-43 (455)
149 3gyx_A Adenylylsulfate reducta 97.9 5.7E-06 2E-10 90.8 5.5 53 279-332 166-227 (662)
150 3cp8_A TRNA uridine 5-carboxym 97.9 5.1E-06 1.7E-10 90.0 4.9 42 18-59 17-59 (641)
151 2dkh_A 3-hydroxybenzoate hydro 97.9 1.1E-05 3.7E-10 88.6 7.6 39 21-59 31-70 (639)
152 1lvl_A Dihydrolipoamide dehydr 97.9 3.5E-06 1.2E-10 88.7 3.5 42 21-63 4-45 (458)
153 3c4a_A Probable tryptophan hyd 97.9 5.5E-06 1.9E-10 84.9 4.8 35 23-57 1-37 (381)
154 1fl2_A Alkyl hydroperoxide red 97.9 6.6E-06 2.3E-10 81.4 5.0 39 22-62 1-39 (310)
155 1xdi_A RV3303C-LPDA; reductase 97.9 3.6E-06 1.2E-10 89.6 3.1 51 280-333 224-274 (499)
156 3g5s_A Methylenetetrahydrofola 97.9 9.2E-06 3.2E-10 82.2 5.8 41 23-63 2-42 (443)
157 3ces_A MNMG, tRNA uridine 5-ca 97.9 6.6E-06 2.2E-10 89.2 5.1 50 280-332 125-175 (651)
158 2aqj_A Tryptophan halogenase, 97.9 8.5E-06 2.9E-10 87.6 5.9 52 279-332 165-216 (538)
159 1ps9_A 2,4-dienoyl-COA reducta 97.9 9.7E-06 3.3E-10 89.5 6.5 42 21-62 372-413 (671)
160 1onf_A GR, grase, glutathione 97.9 5.4E-06 1.8E-10 88.3 4.3 55 279-335 217-272 (500)
161 1y56_A Hypothetical protein PH 97.9 5.6E-06 1.9E-10 88.0 4.3 42 21-63 107-148 (493)
162 4b1b_A TRXR, thioredoxin reduc 97.9 5.7E-06 1.9E-10 88.7 4.3 52 279-333 263-314 (542)
163 3ihm_A Styrene monooxygenase A 97.9 6E-06 2.1E-10 86.1 4.3 34 22-55 22-55 (430)
164 2zxi_A TRNA uridine 5-carboxym 97.9 7.5E-06 2.6E-10 88.4 5.0 51 279-332 123-174 (637)
165 1kf6_A Fumarate reductase flav 97.9 5.7E-06 2E-10 90.0 3.6 52 279-332 134-191 (602)
166 1kdg_A CDH, cellobiose dehydro 97.9 1E-05 3.4E-10 87.2 5.4 38 20-57 5-42 (546)
167 2e5v_A L-aspartate oxidase; ar 97.9 1.1E-05 3.6E-10 85.3 5.5 51 279-332 119-170 (472)
168 2ywl_A Thioredoxin reductase r 97.8 1.1E-05 3.9E-10 73.1 4.8 33 23-55 2-34 (180)
169 3q9t_A Choline dehydrogenase a 97.8 1.1E-05 3.7E-10 87.2 5.3 37 20-56 4-41 (577)
170 3t37_A Probable dehydrogenase; 97.8 1E-05 3.4E-10 86.6 4.6 35 22-56 17-52 (526)
171 3s5w_A L-ornithine 5-monooxyge 97.8 1E-05 3.5E-10 85.0 4.5 41 21-61 29-74 (463)
172 3qvp_A Glucose oxidase; oxidor 97.8 1.7E-05 5.7E-10 85.7 5.5 38 18-55 15-53 (583)
173 1lqt_A FPRA; NADP+ derivative, 97.8 1.1E-05 3.8E-10 84.8 3.8 43 20-62 1-50 (456)
174 2gag_A Heterotetrameric sarcos 97.8 1.5E-05 5.3E-10 91.4 5.2 42 21-62 127-168 (965)
175 1jnr_A Adenylylsulfate reducta 97.8 1.8E-05 6.1E-10 86.8 5.6 52 279-332 151-212 (643)
176 2e4g_A Tryptophan halogenase; 97.8 2E-05 6.7E-10 85.0 5.7 52 279-332 194-246 (550)
177 1hyu_A AHPF, alkyl hydroperoxi 97.7 2E-05 6.7E-10 84.3 5.4 41 20-62 210-250 (521)
178 1ju2_A HydroxynitrIle lyase; f 97.7 1.3E-05 4.5E-10 86.0 4.0 38 21-59 25-62 (536)
179 2pyx_A Tryptophan halogenase; 97.7 1.5E-05 5.2E-10 85.3 4.4 52 279-332 175-227 (526)
180 3cgb_A Pyridine nucleotide-dis 97.7 1.9E-05 6.6E-10 83.5 4.7 52 279-334 227-278 (480)
181 3kd9_A Coenzyme A disulfide re 97.7 2.2E-05 7.5E-10 82.3 4.8 42 20-61 1-44 (449)
182 3ics_A Coenzyme A-disulfide re 97.7 2.2E-05 7.7E-10 85.2 5.0 50 279-333 228-277 (588)
183 2x8g_A Thioredoxin glutathione 97.7 2E-05 7E-10 85.7 4.6 43 20-62 105-155 (598)
184 2weu_A Tryptophan 5-halogenase 97.7 1.5E-05 5.2E-10 85.0 3.4 52 279-332 173-224 (511)
185 3iwa_A FAD-dependent pyridine 97.7 1.9E-05 6.6E-10 83.3 4.1 55 278-335 201-255 (472)
186 1pn0_A Phenol 2-monooxygenase; 97.7 2.5E-05 8.5E-10 86.0 5.1 45 21-65 7-58 (665)
187 1gte_A Dihydropyrimidine dehyd 97.7 2.8E-05 9.5E-10 89.8 5.4 41 21-61 186-227 (1025)
188 1cjc_A Protein (adrenodoxin re 97.6 2.5E-05 8.6E-10 82.1 4.3 42 21-62 5-48 (460)
189 1n4w_A CHOD, cholesterol oxida 97.6 3.9E-05 1.4E-09 81.6 5.2 39 20-58 3-41 (504)
190 3oc4_A Oxidoreductase, pyridin 97.6 4.2E-05 1.4E-09 80.2 4.6 52 278-333 188-239 (452)
191 3h28_A Sulfide-quinone reducta 97.5 4.3E-05 1.5E-09 79.6 4.3 39 23-61 3-43 (430)
192 1coy_A Cholesterol oxidase; ox 97.5 7.1E-05 2.4E-09 79.7 6.0 38 20-57 9-46 (507)
193 3fim_B ARYL-alcohol oxidase; A 97.5 4.2E-05 1.4E-09 82.4 4.1 38 22-59 2-40 (566)
194 1q1r_A Putidaredoxin reductase 97.5 7.3E-05 2.5E-09 77.9 5.7 57 279-335 191-247 (431)
195 2cdu_A NADPH oxidase; flavoenz 97.5 5.2E-05 1.8E-09 79.5 4.6 54 278-334 190-243 (452)
196 1gpe_A Protein (glucose oxidas 97.5 9.1E-05 3.1E-09 80.3 5.8 38 20-57 22-60 (587)
197 2jbv_A Choline oxidase; alcoho 97.4 9.4E-05 3.2E-09 79.5 5.5 39 21-59 12-51 (546)
198 2bc0_A NADH oxidase; flavoprot 97.4 6.8E-05 2.3E-09 79.5 4.4 52 279-334 236-287 (490)
199 1m6i_A Programmed cell death p 97.4 8.1E-05 2.8E-09 79.0 4.9 54 279-335 226-279 (493)
200 3h8l_A NADH oxidase; membrane 97.4 5.2E-05 1.8E-09 78.3 3.3 51 279-336 218-268 (409)
201 1nhp_A NADH peroxidase; oxidor 97.4 7.7E-05 2.6E-09 78.0 4.6 52 279-334 191-242 (447)
202 2v3a_A Rubredoxin reductase; a 97.4 9E-05 3.1E-09 75.9 4.9 53 279-334 187-239 (384)
203 2gqw_A Ferredoxin reductase; f 97.4 0.00011 3.6E-09 76.1 4.8 50 279-335 187-236 (408)
204 1xhc_A NADH oxidase /nitrite r 97.3 0.00016 5.3E-09 73.7 4.8 46 280-333 184-229 (367)
205 3sx6_A Sulfide-quinone reducta 97.3 0.00013 4.4E-09 76.1 4.1 36 22-57 4-42 (437)
206 3ef6_A Toluene 1,2-dioxygenase 97.3 0.00021 7.3E-09 73.8 5.3 54 279-335 185-238 (410)
207 4b63_A L-ornithine N5 monooxyg 97.2 7.8E-05 2.7E-09 79.3 1.9 44 20-63 37-80 (501)
208 3ntd_A FAD-dependent pyridine 97.2 0.00019 6.4E-09 77.4 4.7 36 23-58 2-39 (565)
209 4g6h_A Rotenone-insensitive NA 97.0 0.0003 1E-08 74.7 3.9 36 21-56 41-76 (502)
210 3vrd_B FCCB subunit, flavocyto 96.9 0.00047 1.6E-08 70.8 4.2 39 23-61 3-43 (401)
211 3klj_A NAD(FAD)-dependent dehy 96.9 0.00072 2.5E-08 69.2 5.2 39 21-59 8-46 (385)
212 4eqs_A Coenzyme A disulfide re 96.8 0.00077 2.6E-08 70.2 4.5 48 279-333 188-235 (437)
213 3hyw_A Sulfide-quinone reducta 96.8 0.00078 2.7E-08 70.0 4.2 34 24-57 4-39 (430)
214 1lss_A TRK system potassium up 95.6 0.011 3.8E-07 50.3 4.8 33 23-55 5-37 (140)
215 2g1u_A Hypothetical protein TM 95.5 0.012 4.3E-07 51.4 4.9 34 22-55 19-52 (155)
216 1nhp_A NADH peroxidase; oxidor 95.5 0.014 4.7E-07 60.8 5.9 39 22-60 149-187 (447)
217 3klj_A NAD(FAD)-dependent dehy 95.4 0.011 3.8E-07 60.2 4.8 39 23-61 147-185 (385)
218 1id1_A Putative potassium chan 95.3 0.018 6.2E-07 50.2 5.2 35 21-55 2-36 (153)
219 3fwz_A Inner membrane protein 95.2 0.026 9.1E-07 48.4 5.7 33 23-55 8-40 (140)
220 4gcm_A TRXR, thioredoxin reduc 95.1 0.017 5.9E-07 56.6 4.8 37 23-59 146-182 (312)
221 3llv_A Exopolyphosphatase-rela 95.0 0.023 7.8E-07 48.7 4.7 33 23-55 7-39 (141)
222 1lvl_A Dihydrolipoamide dehydr 94.8 0.021 7.3E-07 59.5 4.8 37 23-59 172-208 (458)
223 2v3a_A Rubredoxin reductase; a 94.7 0.028 9.4E-07 57.1 5.4 39 23-61 146-184 (384)
224 2eq6_A Pyruvate dehydrogenase 94.7 0.028 9.6E-07 58.7 5.4 37 23-59 170-206 (464)
225 1ebd_A E3BD, dihydrolipoamide 94.6 0.028 9.6E-07 58.5 5.2 37 23-59 171-207 (455)
226 1v59_A Dihydrolipoamide dehydr 94.6 0.032 1.1E-06 58.4 5.6 38 23-60 184-221 (478)
227 1xhc_A NADH oxidase /nitrite r 94.5 0.027 9.4E-07 56.9 4.8 37 23-59 144-180 (367)
228 2yqu_A 2-oxoglutarate dehydrog 94.5 0.029 1E-06 58.4 5.1 37 23-59 168-204 (455)
229 3c85_A Putative glutathione-re 94.5 0.034 1.2E-06 50.0 4.8 35 21-55 38-73 (183)
230 3ic5_A Putative saccharopine d 94.5 0.037 1.3E-06 45.3 4.7 33 23-55 6-39 (118)
231 2gqw_A Ferredoxin reductase; f 94.2 0.043 1.5E-06 56.3 5.4 38 23-60 146-183 (408)
232 3k6j_A Protein F01G10.3, confi 94.2 0.053 1.8E-06 56.3 6.1 34 23-56 55-88 (460)
233 4a5l_A Thioredoxin reductase; 94.2 0.037 1.3E-06 54.0 4.7 35 23-57 153-187 (314)
234 1ges_A Glutathione reductase; 94.1 0.04 1.4E-06 57.3 5.1 37 23-59 168-204 (450)
235 4e12_A Diketoreductase; oxidor 94.1 0.048 1.6E-06 52.9 5.3 35 22-56 4-38 (283)
236 3ado_A Lambda-crystallin; L-gu 94.1 0.04 1.4E-06 54.4 4.7 34 23-56 7-40 (319)
237 2r9z_A Glutathione amide reduc 93.7 0.053 1.8E-06 56.6 5.1 37 23-59 167-203 (463)
238 4ap3_A Steroid monooxygenase; 93.7 0.066 2.3E-06 57.2 5.9 37 21-57 190-226 (549)
239 4e21_A 6-phosphogluconate dehy 93.7 0.055 1.9E-06 54.5 4.9 39 17-55 17-55 (358)
240 3gwf_A Cyclohexanone monooxyge 93.7 0.071 2.4E-06 56.8 6.1 35 22-56 178-212 (540)
241 3uox_A Otemo; baeyer-villiger 93.7 0.074 2.5E-06 56.8 6.1 37 21-57 184-220 (545)
242 3cgb_A Pyridine nucleotide-dis 93.6 0.039 1.3E-06 57.9 3.9 38 22-59 186-223 (480)
243 2hmt_A YUAA protein; RCK, KTN, 93.6 0.054 1.8E-06 46.1 4.1 33 23-55 7-39 (144)
244 3doj_A AT3G25530, dehydrogenas 93.5 0.065 2.2E-06 52.7 5.1 36 21-56 20-55 (310)
245 3l4b_C TRKA K+ channel protien 93.5 0.051 1.7E-06 50.4 4.1 32 24-55 2-33 (218)
246 1zmd_A Dihydrolipoyl dehydroge 93.5 0.066 2.3E-06 56.0 5.4 37 23-59 179-215 (474)
247 1q1r_A Putidaredoxin reductase 93.5 0.07 2.4E-06 55.1 5.4 38 23-60 150-187 (431)
248 2bc0_A NADH oxidase; flavoprot 93.4 0.062 2.1E-06 56.5 5.0 37 23-59 195-231 (490)
249 1f0y_A HCDH, L-3-hydroxyacyl-C 93.4 0.078 2.7E-06 51.9 5.3 32 24-55 17-48 (302)
250 3qsg_A NAD-binding phosphogluc 93.4 0.054 1.8E-06 53.4 4.2 49 7-55 7-58 (312)
251 1ryi_A Glycine oxidase; flavop 93.3 0.11 3.9E-06 52.1 6.7 59 271-333 153-214 (382)
252 2a8x_A Dihydrolipoyl dehydroge 93.3 0.068 2.3E-06 55.7 5.1 37 23-59 172-208 (464)
253 2y0c_A BCEC, UDP-glucose dehyd 93.3 0.066 2.2E-06 56.1 4.9 34 22-55 8-41 (478)
254 1ojt_A Surface protein; redox- 93.3 0.057 1.9E-06 56.6 4.5 37 23-59 186-222 (482)
255 3ic9_A Dihydrolipoamide dehydr 93.3 0.076 2.6E-06 55.9 5.4 38 23-60 175-212 (492)
256 3ef6_A Toluene 1,2-dioxygenase 93.3 0.073 2.5E-06 54.5 5.1 38 23-60 144-181 (410)
257 1bg6_A N-(1-D-carboxylethyl)-L 93.2 0.072 2.5E-06 53.3 4.9 35 21-55 3-37 (359)
258 2q0l_A TRXR, thioredoxin reduc 93.1 0.08 2.7E-06 51.5 4.9 36 23-58 144-179 (311)
259 2raf_A Putative dinucleotide-b 93.1 0.092 3.2E-06 48.4 5.1 35 22-56 19-53 (209)
260 3d1c_A Flavin-containing putat 93.1 0.071 2.4E-06 53.3 4.6 36 23-58 167-202 (369)
261 3kd9_A Coenzyme A disulfide re 93.1 0.086 2.9E-06 54.7 5.4 37 24-60 150-186 (449)
262 1dxl_A Dihydrolipoamide dehydr 93.0 0.06 2.1E-06 56.2 4.1 37 23-59 178-214 (470)
263 1ks9_A KPA reductase;, 2-dehyd 92.9 0.09 3.1E-06 50.8 4.9 33 24-56 2-34 (291)
264 3ghy_A Ketopantoate reductase 92.9 0.085 2.9E-06 52.5 4.8 33 22-54 3-35 (335)
265 2vns_A Metalloreductase steap3 92.9 0.09 3.1E-06 48.7 4.7 33 23-55 29-61 (215)
266 3i83_A 2-dehydropantoate 2-red 92.9 0.089 3.1E-06 52.0 4.9 33 23-55 3-35 (320)
267 4eqs_A Coenzyme A disulfide re 92.9 0.11 3.8E-06 53.7 5.9 39 23-61 148-186 (437)
268 3dtt_A NADP oxidoreductase; st 92.9 0.094 3.2E-06 49.7 4.9 36 20-55 17-52 (245)
269 3vtf_A UDP-glucose 6-dehydroge 92.8 0.097 3.3E-06 54.0 5.2 33 23-55 22-54 (444)
270 3g0o_A 3-hydroxyisobutyrate de 92.8 0.092 3.2E-06 51.4 4.9 34 22-55 7-40 (303)
271 2dpo_A L-gulonate 3-dehydrogen 92.8 0.088 3E-06 52.0 4.7 34 23-56 7-40 (319)
272 2hqm_A GR, grase, glutathione 92.8 0.089 3E-06 55.1 5.1 37 23-59 186-222 (479)
273 3k96_A Glycerol-3-phosphate de 92.8 0.097 3.3E-06 52.6 5.1 35 21-55 28-62 (356)
274 1fl2_A Alkyl hydroperoxide red 92.7 0.092 3.1E-06 51.1 4.7 35 23-57 145-179 (310)
275 1onf_A GR, grase, glutathione 92.7 0.092 3.1E-06 55.3 5.1 37 23-59 177-213 (500)
276 1pzg_A LDH, lactate dehydrogen 92.7 0.11 3.7E-06 51.7 5.2 34 22-55 9-43 (331)
277 3fg2_P Putative rubredoxin red 92.7 0.11 3.8E-06 53.0 5.4 39 23-61 143-181 (404)
278 3hn2_A 2-dehydropantoate 2-red 92.6 0.095 3.2E-06 51.6 4.7 33 23-55 3-35 (312)
279 2izz_A Pyrroline-5-carboxylate 92.5 0.094 3.2E-06 51.9 4.6 41 15-55 15-59 (322)
280 2ew2_A 2-dehydropantoate 2-red 92.5 0.11 3.6E-06 50.9 4.8 33 23-55 4-36 (316)
281 1zk7_A HGII, reductase, mercur 92.5 0.11 3.6E-06 54.3 5.1 37 23-59 177-213 (467)
282 3lxd_A FAD-dependent pyridine 92.4 0.12 4.1E-06 52.9 5.4 40 22-61 152-191 (415)
283 2qae_A Lipoamide, dihydrolipoy 92.4 0.11 3.7E-06 54.2 5.1 37 23-59 175-211 (468)
284 3lk7_A UDP-N-acetylmuramoylala 92.4 0.12 4E-06 53.8 5.3 35 22-56 9-43 (451)
285 1vdc_A NTR, NADPH dependent th 92.4 0.11 3.6E-06 51.2 4.8 36 23-58 160-195 (333)
286 3axb_A Putative oxidoreductase 92.4 0.19 6.5E-06 51.8 6.9 41 20-60 21-62 (448)
287 3gg2_A Sugar dehydrogenase, UD 92.3 0.11 3.7E-06 54.1 4.8 33 23-55 3-35 (450)
288 2xve_A Flavin-containing monoo 92.3 0.1 3.5E-06 54.5 4.7 36 23-58 198-233 (464)
289 1trb_A Thioredoxin reductase; 92.3 0.11 3.7E-06 50.7 4.7 36 23-58 146-181 (320)
290 2q7v_A Thioredoxin reductase; 92.3 0.11 3.8E-06 50.9 4.8 36 23-58 153-188 (325)
291 2cdu_A NADPH oxidase; flavoenz 92.3 0.11 3.8E-06 53.9 5.0 37 23-59 150-186 (452)
292 2a87_A TRXR, TR, thioredoxin r 92.3 0.11 3.9E-06 51.2 4.8 36 23-58 156-191 (335)
293 1zcj_A Peroxisomal bifunctiona 92.2 0.17 5.7E-06 52.9 6.1 33 23-55 38-70 (463)
294 2gv8_A Monooxygenase; FMO, FAD 92.1 0.11 3.8E-06 53.8 4.8 35 23-57 213-248 (447)
295 3qha_A Putative oxidoreductase 92.1 0.12 4E-06 50.5 4.6 35 22-56 15-49 (296)
296 2zbw_A Thioredoxin reductase; 92.1 0.12 4.2E-06 50.8 4.8 37 23-59 153-189 (335)
297 1zej_A HBD-9, 3-hydroxyacyl-CO 92.1 0.13 4.4E-06 50.1 4.8 34 21-55 11-44 (293)
298 3g79_A NDP-N-acetyl-D-galactos 92.0 0.14 4.7E-06 53.5 5.2 34 23-56 19-54 (478)
299 4a7p_A UDP-glucose dehydrogena 92.0 0.13 4.5E-06 53.2 5.0 35 22-56 8-42 (446)
300 1mv8_A GMD, GDP-mannose 6-dehy 92.0 0.12 4.1E-06 53.5 4.7 32 24-55 2-33 (436)
301 3ntd_A FAD-dependent pyridine 91.9 0.13 4.5E-06 54.9 5.1 36 24-59 153-188 (565)
302 2oln_A NIKD protein; flavoprot 91.8 0.32 1.1E-05 49.1 7.8 38 21-58 3-40 (397)
303 3urh_A Dihydrolipoyl dehydroge 91.7 0.14 4.8E-06 53.7 5.0 38 23-60 199-236 (491)
304 3e8x_A Putative NAD-dependent 91.7 0.14 4.9E-06 47.6 4.6 35 21-55 20-55 (236)
305 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.16 5.6E-06 47.3 4.7 36 19-54 28-63 (223)
306 3dfu_A Uncharacterized protein 91.6 0.083 2.8E-06 49.5 2.7 33 22-54 6-38 (232)
307 4g65_A TRK system potassium up 91.6 0.098 3.3E-06 54.5 3.6 34 22-55 3-36 (461)
308 3cty_A Thioredoxin reductase; 91.6 0.14 4.8E-06 50.1 4.6 36 23-58 156-191 (319)
309 3l8k_A Dihydrolipoyl dehydroge 91.6 0.23 7.8E-06 51.7 6.4 38 23-60 173-210 (466)
310 3oc4_A Oxidoreductase, pyridin 91.5 0.18 6E-06 52.4 5.4 38 23-60 148-185 (452)
311 3dk9_A Grase, GR, glutathione 91.5 0.16 5.6E-06 53.0 5.1 36 23-58 188-223 (478)
312 2uzz_A N-methyl-L-tryptophan o 91.4 0.32 1.1E-05 48.5 7.2 42 22-63 2-43 (372)
313 3ggo_A Prephenate dehydrogenas 91.4 0.19 6.6E-06 49.5 5.3 33 23-55 34-68 (314)
314 2pv7_A T-protein [includes: ch 91.4 0.23 7.9E-06 48.4 5.8 34 23-56 22-56 (298)
315 3da1_A Glycerol-3-phosphate de 91.4 0.25 8.5E-06 52.9 6.5 45 19-63 15-59 (561)
316 3s5w_A L-ornithine 5-monooxyge 91.3 0.12 4.2E-06 53.6 4.0 36 22-57 227-264 (463)
317 3pef_A 6-phosphogluconate dehy 91.3 0.17 5.8E-06 49.0 4.7 34 23-56 2-35 (287)
318 3g17_A Similar to 2-dehydropan 91.2 0.12 4.1E-06 50.4 3.5 33 23-55 3-35 (294)
319 1kyq_A Met8P, siroheme biosynt 91.2 0.1 3.5E-06 50.2 3.0 38 19-56 10-47 (274)
320 3itj_A Thioredoxin reductase 1 91.2 0.17 5.8E-06 49.6 4.7 37 23-59 174-210 (338)
321 4dll_A 2-hydroxy-3-oxopropiona 91.1 0.2 6.7E-06 49.5 5.1 34 22-55 31-64 (320)
322 3ab1_A Ferredoxin--NADP reduct 91.1 0.18 6E-06 50.3 4.8 37 23-59 164-200 (360)
323 3gpi_A NAD-dependent epimerase 91.1 0.2 6.8E-06 48.2 5.0 34 23-56 4-37 (286)
324 1z82_A Glycerol-3-phosphate de 91.1 0.18 6.3E-06 50.0 4.9 33 22-54 14-46 (335)
325 2cul_A Glucose-inhibited divis 91.1 0.48 1.7E-05 44.1 7.6 52 279-333 68-120 (232)
326 2x5o_A UDP-N-acetylmuramoylala 91.0 0.15 5.1E-06 52.8 4.2 36 23-58 6-41 (439)
327 1mo9_A ORF3; nucleotide bindin 91.0 0.19 6.5E-06 53.2 5.1 38 23-60 215-252 (523)
328 3hwr_A 2-dehydropantoate 2-red 90.9 0.19 6.5E-06 49.5 4.7 34 21-55 18-51 (318)
329 2uyy_A N-PAC protein; long-cha 90.9 0.23 7.9E-06 48.7 5.3 35 22-56 30-64 (316)
330 3mog_A Probable 3-hydroxybutyr 90.8 0.2 6.8E-06 52.5 5.0 33 23-55 6-38 (483)
331 3pid_A UDP-glucose 6-dehydroge 90.8 0.19 6.7E-06 51.6 4.8 33 23-56 37-69 (432)
332 4huj_A Uncharacterized protein 90.7 0.12 4.2E-06 47.9 3.0 35 21-55 22-57 (220)
333 2zyd_A 6-phosphogluconate dehy 90.7 0.19 6.7E-06 52.5 4.8 37 19-55 12-48 (480)
334 3lad_A Dihydrolipoamide dehydr 90.7 0.21 7.1E-06 52.1 5.1 37 23-59 181-217 (476)
335 1lld_A L-lactate dehydrogenase 90.7 0.21 7E-06 49.2 4.8 33 23-55 8-42 (319)
336 2rgh_A Alpha-glycerophosphate 90.7 0.37 1.3E-05 51.6 7.1 40 21-60 31-70 (571)
337 1jay_A Coenzyme F420H2:NADP+ o 90.6 0.22 7.5E-06 45.6 4.6 32 24-55 2-34 (212)
338 2x8g_A Thioredoxin glutathione 90.6 0.18 6.2E-06 54.3 4.6 32 23-54 287-318 (598)
339 3cgv_A Geranylgeranyl reductas 90.6 0.31 1.1E-05 49.0 6.2 52 279-332 102-156 (397)
340 4dio_A NAD(P) transhydrogenase 90.6 0.22 7.4E-06 50.7 4.9 34 23-56 191-224 (405)
341 2ewd_A Lactate dehydrogenase,; 90.6 0.22 7.4E-06 49.1 4.8 33 23-55 5-38 (317)
342 3ics_A Coenzyme A-disulfide re 90.6 0.24 8.1E-06 53.3 5.4 38 23-60 188-225 (588)
343 3l6d_A Putative oxidoreductase 90.5 0.25 8.7E-06 48.3 5.2 34 22-55 9-42 (306)
344 1xdi_A RV3303C-LPDA; reductase 90.5 0.22 7.5E-06 52.3 5.0 38 23-60 183-220 (499)
345 3oj0_A Glutr, glutamyl-tRNA re 90.4 0.13 4.5E-06 44.1 2.7 33 23-55 22-54 (144)
346 3ojo_A CAP5O; rossmann fold, c 90.4 0.18 6.3E-06 51.8 4.2 34 23-56 12-45 (431)
347 3ktd_A Prephenate dehydrogenas 90.4 0.26 8.8E-06 49.1 5.1 33 23-55 9-41 (341)
348 3l9w_A Glutathione-regulated p 90.3 0.23 7.9E-06 50.9 4.8 34 23-56 5-38 (413)
349 1dlj_A UDP-glucose dehydrogena 90.3 0.2 7E-06 51.1 4.4 31 24-55 2-32 (402)
350 4gwg_A 6-phosphogluconate dehy 90.3 0.25 8.6E-06 51.6 5.1 35 21-55 3-37 (484)
351 2gf3_A MSOX, monomeric sarcosi 90.2 0.45 1.5E-05 47.7 6.9 37 22-58 3-39 (389)
352 3tl2_A Malate dehydrogenase; c 90.2 0.28 9.5E-06 48.3 5.1 36 20-55 6-42 (315)
353 1hyu_A AHPF, alkyl hydroperoxi 90.2 0.19 6.5E-06 53.2 4.2 36 23-58 356-391 (521)
354 1txg_A Glycerol-3-phosphate de 90.1 0.19 6.5E-06 49.7 3.9 30 24-53 2-31 (335)
355 3f8d_A Thioredoxin reductase ( 90.1 0.24 8.4E-06 48.0 4.7 37 23-59 155-191 (323)
356 3ego_A Probable 2-dehydropanto 90.0 0.26 8.8E-06 48.3 4.8 32 23-55 3-34 (307)
357 1evy_A Glycerol-3-phosphate de 90.0 0.22 7.5E-06 50.1 4.4 32 24-55 17-48 (366)
358 3pdu_A 3-hydroxyisobutyrate de 90.0 0.19 6.7E-06 48.6 3.8 33 24-56 3-35 (287)
359 2weu_A Tryptophan 5-halogenase 89.9 0.64 2.2E-05 48.8 8.1 34 23-56 3-39 (511)
360 2h78_A Hibadh, 3-hydroxyisobut 89.8 0.27 9.4E-06 47.8 4.7 33 23-55 4-36 (302)
361 2hjr_A Malate dehydrogenase; m 89.8 0.31 1.1E-05 48.3 5.1 33 23-55 15-48 (328)
362 1t2d_A LDH-P, L-lactate dehydr 89.8 0.32 1.1E-05 48.0 5.2 33 23-55 5-38 (322)
363 2v6b_A L-LDH, L-lactate dehydr 89.7 0.29 9.9E-06 47.9 4.8 32 24-55 2-35 (304)
364 2rcy_A Pyrroline carboxylate r 89.7 0.25 8.7E-06 46.9 4.3 35 22-56 4-42 (262)
365 2qyt_A 2-dehydropantoate 2-red 89.6 0.2 7E-06 48.9 3.7 31 23-53 9-45 (317)
366 3p2y_A Alanine dehydrogenase/p 89.6 0.22 7.5E-06 50.2 3.9 33 23-55 185-217 (381)
367 2vdc_G Glutamate synthase [NAD 89.6 0.29 9.8E-06 50.9 5.0 36 22-57 264-300 (456)
368 2q3e_A UDP-glucose 6-dehydroge 89.6 0.25 8.7E-06 51.5 4.6 33 23-55 6-40 (467)
369 2e4g_A Tryptophan halogenase; 89.5 0.64 2.2E-05 49.4 7.8 37 20-56 23-62 (550)
370 1x0v_A GPD-C, GPDH-C, glycerol 89.5 0.19 6.3E-06 50.3 3.3 35 22-56 8-49 (354)
371 3atr_A Conserved archaeal prot 89.5 0.57 1.9E-05 48.4 7.1 37 21-57 5-41 (453)
372 3cky_A 2-hydroxymethyl glutara 89.4 0.31 1.1E-05 47.3 4.8 33 23-55 5-37 (301)
373 3lzw_A Ferredoxin--NADP reduct 89.4 0.32 1.1E-05 47.5 4.9 37 23-59 155-191 (332)
374 3r9u_A Thioredoxin reductase; 89.4 0.31 1E-05 47.2 4.7 35 23-57 148-182 (315)
375 2o3j_A UDP-glucose 6-dehydroge 89.3 0.3 1E-05 51.1 4.9 33 23-55 10-44 (481)
376 2f1k_A Prephenate dehydrogenas 89.2 0.34 1.2E-05 46.5 4.8 32 24-55 2-33 (279)
377 3dgz_A Thioredoxin reductase 2 89.1 0.36 1.2E-05 50.6 5.3 34 23-56 186-219 (488)
378 4ezb_A Uncharacterized conserv 89.0 0.3 1E-05 48.1 4.3 33 23-55 25-58 (317)
379 2x3n_A Probable FAD-dependent 88.9 0.54 1.9E-05 47.5 6.4 37 21-57 5-41 (399)
380 1yqg_A Pyrroline-5-carboxylate 88.9 0.31 1E-05 46.3 4.2 32 24-55 2-34 (263)
381 2iz1_A 6-phosphogluconate dehy 88.9 0.36 1.2E-05 50.4 5.1 34 22-55 5-38 (474)
382 1guz_A Malate dehydrogenase; o 88.9 0.37 1.3E-05 47.3 4.9 32 24-55 2-35 (310)
383 3qfa_A Thioredoxin reductase 1 88.8 0.38 1.3E-05 50.8 5.3 33 23-55 211-243 (519)
384 3eag_A UDP-N-acetylmuramate:L- 88.7 0.38 1.3E-05 47.6 4.9 34 23-56 5-39 (326)
385 2gf2_A Hibadh, 3-hydroxyisobut 88.7 0.37 1.3E-05 46.7 4.7 32 24-55 2-33 (296)
386 3tri_A Pyrroline-5-carboxylate 88.3 0.44 1.5E-05 46.0 4.9 34 22-55 3-39 (280)
387 3ius_A Uncharacterized conserv 88.3 0.38 1.3E-05 46.0 4.6 33 23-55 6-38 (286)
388 3nix_A Flavoprotein/dehydrogen 88.2 0.69 2.4E-05 46.9 6.7 38 21-58 4-41 (421)
389 1fec_A Trypanothione reductase 88.2 1 3.5E-05 47.0 8.1 43 21-63 2-53 (490)
390 1nyt_A Shikimate 5-dehydrogena 88.2 0.53 1.8E-05 45.1 5.4 33 23-55 120-152 (271)
391 3orf_A Dihydropteridine reduct 88.2 0.46 1.6E-05 44.8 4.9 34 23-56 23-57 (251)
392 3fbs_A Oxidoreductase; structu 88.1 0.41 1.4E-05 45.8 4.6 33 23-56 142-174 (297)
393 3ew7_A LMO0794 protein; Q8Y8U8 88.1 0.47 1.6E-05 43.3 4.8 32 24-55 2-34 (221)
394 3iwa_A FAD-dependent pyridine 88.1 0.94 3.2E-05 47.0 7.7 38 21-58 2-41 (472)
395 2aef_A Calcium-gated potassium 88.1 0.22 7.4E-06 46.5 2.5 32 23-55 10-41 (234)
396 2wpf_A Trypanothione reductase 88.1 1.1 3.8E-05 46.9 8.3 44 20-63 5-57 (495)
397 1vpd_A Tartronate semialdehyde 88.0 0.42 1.5E-05 46.3 4.7 33 23-55 6-38 (299)
398 4b1b_A TRXR, thioredoxin reduc 88.0 0.48 1.7E-05 50.3 5.4 37 23-59 224-260 (542)
399 2pgd_A 6-phosphogluconate dehy 88.0 0.43 1.5E-05 49.9 5.0 33 23-55 3-35 (482)
400 2gmh_A Electron transfer flavo 87.9 0.93 3.2E-05 48.6 7.7 53 279-332 144-211 (584)
401 2wtb_A MFP2, fatty acid multif 87.9 0.37 1.3E-05 53.1 4.6 33 23-55 313-345 (725)
402 3gvi_A Malate dehydrogenase; N 87.8 0.5 1.7E-05 46.6 5.1 36 20-55 5-41 (324)
403 1x13_A NAD(P) transhydrogenase 87.8 0.42 1.4E-05 48.8 4.6 33 23-55 173-205 (401)
404 1hdo_A Biliverdin IX beta redu 87.8 0.52 1.8E-05 42.4 4.9 33 23-55 4-37 (206)
405 1cjc_A Protein (adrenodoxin re 87.7 0.42 1.4E-05 49.7 4.7 35 23-57 146-201 (460)
406 4ffl_A PYLC; amino acid, biosy 87.7 0.46 1.6E-05 47.5 4.9 33 24-56 3-35 (363)
407 3c24_A Putative oxidoreductase 87.7 0.45 1.6E-05 45.9 4.6 33 23-55 12-45 (286)
408 3dgh_A TRXR-1, thioredoxin red 87.7 0.51 1.8E-05 49.2 5.4 33 23-55 188-220 (483)
409 4id9_A Short-chain dehydrogena 87.6 0.46 1.6E-05 46.9 4.7 37 21-57 18-55 (347)
410 2p4q_A 6-phosphogluconate dehy 87.6 0.46 1.6E-05 49.9 4.9 33 23-55 11-43 (497)
411 2g5c_A Prephenate dehydrogenas 87.6 0.48 1.6E-05 45.5 4.7 32 24-55 3-36 (281)
412 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.5 0.46 1.6E-05 49.7 4.8 33 23-55 2-34 (478)
413 3o0h_A Glutathione reductase; 87.5 1.1 3.8E-05 46.7 7.8 42 21-63 25-66 (484)
414 1jw9_B Molybdopterin biosynthe 87.4 0.43 1.5E-05 45.2 4.2 34 22-55 31-65 (249)
415 1a5z_A L-lactate dehydrogenase 87.4 0.41 1.4E-05 47.1 4.2 32 24-55 2-35 (319)
416 3p7m_A Malate dehydrogenase; p 87.4 0.58 2E-05 46.1 5.2 36 20-55 3-39 (321)
417 1m6i_A Programmed cell death p 87.4 1.3 4.4E-05 46.4 8.3 39 20-58 9-49 (493)
418 4b4o_A Epimerase family protei 87.3 0.59 2E-05 45.1 5.2 34 24-57 2-36 (298)
419 3h2s_A Putative NADH-flavin re 87.3 0.55 1.9E-05 43.0 4.7 32 24-55 2-34 (224)
420 1np3_A Ketol-acid reductoisome 87.2 0.52 1.8E-05 46.8 4.8 33 23-55 17-49 (338)
421 2pzm_A Putative nucleotide sug 87.2 0.65 2.2E-05 45.6 5.5 41 15-55 13-54 (330)
422 1w4x_A Phenylacetone monooxyge 87.1 0.85 2.9E-05 48.4 6.7 35 22-56 186-220 (542)
423 2qcu_A Aerobic glycerol-3-phos 87.1 1.1 3.9E-05 46.9 7.7 40 20-59 1-40 (501)
424 3c7a_A Octopine dehydrogenase; 87.0 0.33 1.1E-05 49.5 3.3 31 23-53 3-34 (404)
425 3c4n_A Uncharacterized protein 87.0 0.32 1.1E-05 49.5 3.2 58 271-332 161-230 (405)
426 1l7d_A Nicotinamide nucleotide 86.9 0.55 1.9E-05 47.6 4.9 34 22-55 172-205 (384)
427 2ywl_A Thioredoxin reductase r 86.8 1.5 5.1E-05 38.6 7.3 50 279-333 56-105 (180)
428 1yj8_A Glycerol-3-phosphate de 86.8 0.38 1.3E-05 48.5 3.6 34 23-56 22-62 (375)
429 2aqj_A Tryptophan halogenase, 86.7 1.2 4E-05 47.2 7.5 37 21-57 4-43 (538)
430 2eez_A Alanine dehydrogenase; 86.7 0.55 1.9E-05 47.3 4.7 33 23-55 167-199 (369)
431 4gbj_A 6-phosphogluconate dehy 86.6 0.52 1.8E-05 45.9 4.4 33 24-56 7-39 (297)
432 2ahr_A Putative pyrroline carb 86.6 0.58 2E-05 44.3 4.6 33 23-55 4-36 (259)
433 1pjc_A Protein (L-alanine dehy 86.5 0.57 2E-05 47.0 4.7 33 23-55 168-200 (361)
434 1ur5_A Malate dehydrogenase; o 86.5 0.62 2.1E-05 45.6 4.9 33 23-55 3-36 (309)
435 4dna_A Probable glutathione re 86.5 1.2 4.2E-05 46.0 7.4 42 21-63 4-45 (463)
436 3e1t_A Halogenase; flavoprotei 86.5 1.1 3.9E-05 47.0 7.2 38 20-57 5-42 (512)
437 1wdk_A Fatty oxidation complex 86.5 0.42 1.4E-05 52.6 4.0 33 23-55 315-347 (715)
438 2cvz_A Dehydrogenase, 3-hydrox 86.4 0.56 1.9E-05 45.1 4.5 31 24-55 3-33 (289)
439 1hyh_A L-hicdh, L-2-hydroxyiso 86.4 0.5 1.7E-05 46.2 4.2 32 24-55 3-36 (309)
440 3d1l_A Putative NADP oxidoredu 86.3 0.53 1.8E-05 44.7 4.2 33 23-55 11-44 (266)
441 3phh_A Shikimate dehydrogenase 86.3 0.68 2.3E-05 44.3 4.9 34 22-55 118-151 (269)
442 2gqf_A Hypothetical protein HI 86.2 1.5 5.1E-05 44.6 7.8 60 271-332 101-162 (401)
443 1pjq_A CYSG, siroheme synthase 86.0 0.57 2E-05 48.6 4.6 36 19-54 9-44 (457)
444 3pqe_A L-LDH, L-lactate dehydr 86.0 0.66 2.3E-05 45.8 4.8 33 22-54 5-39 (326)
445 2bs2_A Quinol-fumarate reducta 86.0 1.4 4.8E-05 47.9 7.8 41 21-61 4-44 (660)
446 2wdq_A Succinate dehydrogenase 85.9 1.4 4.9E-05 47.2 7.8 42 20-61 5-46 (588)
447 3k31_A Enoyl-(acyl-carrier-pro 85.9 1 3.5E-05 43.6 6.1 36 20-55 28-66 (296)
448 3gt0_A Pyrroline-5-carboxylate 85.9 0.71 2.4E-05 43.4 4.8 33 23-55 3-39 (247)
449 2q1w_A Putative nucleotide sug 85.9 0.71 2.4E-05 45.4 5.0 44 10-55 11-55 (333)
450 1o94_A Tmadh, trimethylamine d 85.9 0.54 1.8E-05 52.0 4.5 36 23-59 529-566 (729)
451 1p77_A Shikimate 5-dehydrogena 85.9 0.57 2E-05 44.9 4.2 33 23-55 120-152 (272)
452 3dhn_A NAD-dependent epimerase 85.8 0.58 2E-05 43.0 4.1 33 23-55 5-38 (227)
453 1edz_A 5,10-methylenetetrahydr 85.8 0.8 2.7E-05 44.9 5.2 43 21-63 176-227 (320)
454 2pyx_A Tryptophan halogenase; 85.8 1.6 5.6E-05 45.9 8.1 36 21-56 6-53 (526)
455 2gag_A Heterotetrameric sarcos 85.7 0.39 1.3E-05 54.8 3.4 37 23-59 285-321 (965)
456 1i36_A Conserved hypothetical 85.6 0.64 2.2E-05 44.1 4.3 30 24-53 2-31 (264)
457 3b1f_A Putative prephenate deh 85.5 0.6 2E-05 45.0 4.2 33 23-55 7-41 (290)
458 2egg_A AROE, shikimate 5-dehyd 85.4 0.89 3E-05 44.2 5.3 33 23-55 142-175 (297)
459 1w6u_A 2,4-dienoyl-COA reducta 85.4 1.3 4.4E-05 42.7 6.6 46 10-55 14-60 (302)
460 2h88_A Succinate dehydrogenase 85.3 1.4 4.6E-05 47.7 7.2 42 20-61 16-57 (621)
461 3i3l_A Alkylhalidase CMLS; fla 85.3 1 3.6E-05 48.3 6.3 42 18-59 19-60 (591)
462 2vhw_A Alanine dehydrogenase; 85.3 0.71 2.4E-05 46.6 4.7 33 23-55 169-201 (377)
463 2zxi_A TRNA uridine 5-carboxym 85.2 1.7 5.9E-05 46.8 7.9 38 21-58 26-64 (637)
464 3dqp_A Oxidoreductase YLBE; al 85.2 0.69 2.3E-05 42.3 4.2 32 24-55 2-34 (219)
465 1y6j_A L-lactate dehydrogenase 85.0 0.84 2.9E-05 44.9 5.0 34 22-55 7-42 (318)
466 1yb4_A Tartronic semialdehyde 84.9 0.61 2.1E-05 45.0 3.9 32 23-55 4-35 (295)
467 3o38_A Short chain dehydrogena 84.9 1.3 4.3E-05 42.0 6.1 35 21-55 21-57 (266)
468 2a9f_A Putative malic enzyme ( 84.8 0.78 2.7E-05 46.2 4.6 35 21-55 187-222 (398)
469 3zwc_A Peroxisomal bifunctiona 84.7 1.1 3.6E-05 49.5 6.0 34 23-56 317-350 (742)
470 1vl6_A Malate oxidoreductase; 84.7 0.79 2.7E-05 46.1 4.6 34 21-54 191-225 (388)
471 2hk9_A Shikimate dehydrogenase 84.6 0.7 2.4E-05 44.4 4.2 34 22-55 129-162 (275)
472 1gte_A Dihydropyrimidine dehyd 84.4 0.73 2.5E-05 53.0 4.8 33 24-56 334-367 (1025)
473 1ff9_A Saccharopine reductase; 84.4 0.81 2.8E-05 47.4 4.7 33 23-55 4-36 (450)
474 2rir_A Dipicolinate synthase, 84.2 0.88 3E-05 44.2 4.7 35 21-55 156-190 (300)
475 3k30_A Histamine dehydrogenase 84.1 0.75 2.6E-05 50.4 4.6 39 23-61 524-564 (690)
476 2d5c_A AROE, shikimate 5-dehyd 83.9 1.1 3.8E-05 42.6 5.2 32 24-55 118-149 (263)
477 1oju_A MDH, malate dehydrogena 83.9 0.79 2.7E-05 44.5 4.2 32 24-55 2-35 (294)
478 3ond_A Adenosylhomocysteinase; 83.9 0.91 3.1E-05 47.2 4.8 34 22-55 265-298 (488)
479 3qvo_A NMRA family protein; st 83.5 0.79 2.7E-05 42.6 3.9 33 23-55 24-58 (236)
480 2z1m_A GDP-D-mannose dehydrata 83.5 1.1 3.6E-05 44.0 5.0 34 23-56 4-38 (345)
481 3ek2_A Enoyl-(acyl-carrier-pro 83.5 1.1 3.8E-05 42.3 5.0 37 19-55 11-50 (271)
482 3abi_A Putative uncharacterize 83.5 0.88 3E-05 45.6 4.5 36 18-54 12-47 (365)
483 1rp0_A ARA6, thiazole biosynth 83.4 2 6.8E-05 41.2 6.8 53 278-332 118-185 (284)
484 1nvt_A Shikimate 5'-dehydrogen 83.4 1.1 3.7E-05 43.3 4.9 32 23-55 129-160 (287)
485 3d4o_A Dipicolinate synthase s 83.4 1 3.4E-05 43.7 4.7 34 22-55 155-188 (293)
486 2dbq_A Glyoxylate reductase; D 83.4 1.8 6.1E-05 42.8 6.6 36 21-56 149-184 (334)
487 1k0i_A P-hydroxybenzoate hydro 83.3 1.2 4.1E-05 44.7 5.5 52 279-332 103-157 (394)
488 3nep_X Malate dehydrogenase; h 83.3 0.91 3.1E-05 44.5 4.3 32 24-55 2-35 (314)
489 3fi9_A Malate dehydrogenase; s 83.2 1.1 3.8E-05 44.5 5.0 34 22-55 8-44 (343)
490 2we8_A Xanthine dehydrogenase; 83.0 1.2 4.2E-05 44.9 5.3 35 23-57 205-239 (386)
491 4gx0_A TRKA domain protein; me 83.0 0.97 3.3E-05 48.2 4.8 34 23-56 349-382 (565)
492 3ces_A MNMG, tRNA uridine 5-ca 82.9 1.9 6.6E-05 46.5 7.0 35 21-55 27-61 (651)
493 3vps_A TUNA, NAD-dependent epi 82.9 1.1 3.8E-05 43.3 4.9 34 23-56 8-42 (321)
494 3i6i_A Putative leucoanthocyan 82.9 1.1 3.6E-05 44.3 4.8 36 20-55 8-44 (346)
495 2yjz_A Metalloreductase steap4 83.5 0.24 8.3E-06 45.3 0.0 46 9-56 8-53 (201)
496 1a4i_A Methylenetetrahydrofola 82.8 1.6 5.3E-05 42.3 5.6 35 20-54 163-198 (301)
497 2gcg_A Glyoxylate reductase/hy 82.7 1.6 5.4E-05 43.1 5.9 35 21-55 154-188 (330)
498 1n7h_A GDP-D-mannose-4,6-dehyd 82.6 1.1 3.8E-05 44.8 4.8 33 24-56 30-63 (381)
499 3vku_A L-LDH, L-lactate dehydr 82.6 1.1 3.7E-05 44.2 4.6 35 21-55 8-44 (326)
500 3gvx_A Glycerate dehydrogenase 82.6 1.7 5.9E-05 42.0 6.0 46 9-56 111-156 (290)
No 1
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=9.6e-72 Score=602.40 Aligned_cols=466 Identities=30% Similarity=0.517 Sum_probs=365.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCC-------C----------
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS-------V---------- 82 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~-------~---------- 82 (539)
+.+|||+||||||.|++.|++|++.|++|||+|+|++|||.+.++++.++.+|+...+.... +
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEA 85 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhh
Confidence 34799999999999999999999999999999999999999999999999999886653100 0
Q ss_pred ----CCCCccccccccccc-------------------------------------------------------------
Q 009247 83 ----CPDPLYSDVEISNYA------------------------------------------------------------- 97 (539)
Q Consensus 83 ----~~~~~~~~~~~~~~~------------------------------------------------------------- 97 (539)
......++.++.++.
T Consensus 86 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (650)
T 1vg0_A 86 IPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPG 165 (650)
T ss_dssp EEBCSSCCCEEEEEEEECSCC-----------------------------------------------------------
T ss_pred ccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 000000111000000
Q ss_pred --------------------------------------------ccc----cccCCCceEEecCCCeEEecChHHHHHHH
Q 009247 98 --------------------------------------------SRL----LSQHPRNFNLDVSGPRVLFCADHAVDLML 129 (539)
Q Consensus 98 --------------------------------------------~~~----~~~~~~~~~~dl~Gp~ll~~~~~l~~~l~ 129 (539)
..+ +....|+|+||+ ||+++++++.++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL-~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 166 PESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDL-VSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ---------------------------------------------CCCHHHHHHTGGGCCEES-SCCCEESSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEee-CCeeeeCCcHHHHHHH
Confidence 000 012579999999 5999999999999999
Q ss_pred hcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHHHHHHHHHhcccccCccccccccccccccCCc
Q 009247 130 KSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSP 209 (539)
Q Consensus 130 ~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s 209 (539)
++|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+||+||||+.++..+.. .+ ..+..+...|
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S 316 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTT 316 (650)
T ss_dssp HHTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSB
T ss_pred HcCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCC
Confidence 99999999999999988885 8889999999999999999999999999999999887532 11 1123556899
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHH
Q 009247 210 FAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRA 289 (539)
Q Consensus 210 ~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~ 289 (539)
+.+||+++++++.++.++.+++++..... .++..++.++.+|+.++++||.+ +++||+||+++|+|+|||++
T Consensus 317 ~~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~s--g~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 317 FSEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSSS--SEEEETTCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhccC--ceEEeCCchhHHHHHHHHHH
Confidence 99999999999999999888777653321 24566777888899999999863 48999999999999999999
Q ss_pred HHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEE
Q 009247 290 AVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGI 369 (539)
Q Consensus 290 a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i 369 (539)
+++||+|+||++|++|.++.++|+++||++.+|++++|++||++|.++ +.... .+...++++|++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~~--------------~~~~~~~v~R~i 453 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENTC--------------SRVQYRQISRAV 453 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTTT--------------TTCCCEEEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhHh--------------ccccccceEEEE
Confidence 999999999999999998721288999998889999999999988775 32110 011246799999
Q ss_pred EEecCCCCCCC---CceEEEeCCCCCCCCCCCcEEEEEeCCCCccCCCCcEEEEEEEeecCccchHHHHHHHHHHHHhhh
Q 009247 370 CITRSSLKPDL---SNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQKLL 446 (539)
Q Consensus 370 ~i~~~~l~~~~---~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~~ 446 (539)
+|+++|+.+.. ..+++++|+.. + ..++||++++|++++.||+|+||+|++|.. ..+++++|++++++|+...
T Consensus 454 ~i~~~pi~~~~~~~~~~~iiiP~~~-g--~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~~--~~~~~~eLe~~l~~L~~~~ 528 (650)
T 1vg0_A 454 LITDGSVLRTDADQQVSILTVPAEE-P--GSFAVRVIELCSSTMTCMKGTYLVHLTCMS--SKTAREDLERVVQKLFTPY 528 (650)
T ss_dssp EEESSCSSCCSCCCCCEEEEECCSS-T--TSCCEEEEEECGGGTSSCTTCEEEEEEEEC--SSCHHHHHHHHHHHHCBSC
T ss_pred EEecCCCCCcCCCcceEEEEccCcc-C--CCCCEEEEEeCCCCCCCCCCCEEEEEEeec--CCCHHHHHHHHHHHHhccc
Confidence 99999986532 35788888765 2 357899999999999999999999999873 3488999999999998531
Q ss_pred hcCCCCCCCCcccccccccCceEEEEEeeEeecCC--------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCCCCC
Q 009247 447 VTGTAGNSSTAQSEDMEEAKPTLLWSALYIQDLSL--------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYPNEE 518 (539)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 518 (539)
. +. +....+..+|.+||++||+|.... +..+||++|++||.+++||++|++||++|++|+|++|
T Consensus 529 ~-~~-------~~~~~~~~~~~vLws~~~~~~~~~~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~~~e~ 600 (650)
T 1vg0_A 529 T-EI-------EAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNED 600 (650)
T ss_dssp S-CC-------C-------CCBEEEEEEEEEEECTTCCGGGSSSCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHSTTCC
T ss_pred c-cc-------ccccccccCCceEEEEEEEeecccccccccccCCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHcCCCC
Confidence 1 11 111124578999999999997643 3458999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcC
Q 009247 519 LFPETTSPENSE 530 (539)
Q Consensus 519 f~p~~~~~~~~~ 530 (539)
||||+|+||||.
T Consensus 601 F~p~~p~~e~ii 612 (650)
T 1vg0_A 601 FCPAPPNPEDIV 612 (650)
T ss_dssp SSCCCC------
T ss_pred CCCCCcCcccee
Confidence 999999999993
No 2
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.3e-63 Score=519.84 Aligned_cols=435 Identities=22% Similarity=0.394 Sum_probs=351.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
++.+|||||||||++|+++|+.|+++|++|+|+|+++++||++++++..++..|+...... .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~--------~---------- 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENI--------P---------- 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCC--------C----------
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCc--------c----------
Confidence 4567999999999999999999999999999999999999999999988776666432110 0
Q ss_pred cccccCCCceEEecCCCeEEecChHHHHHHHhcCccccccceeccceeeEc--------cCCceeecCCCHHHhhhccCC
Q 009247 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (539)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~--------~~g~~~~vp~s~~~~f~~~~l 170 (539)
..+ ..+|+|++|+. |+++++.+.++++|.++++.+|++|+.++..|++. ++|+++++|+++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 112 35689999995 99999999999999999999999999999998764 256799999999999999999
Q ss_pred ChHHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhH
Q 009247 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (539)
Q Consensus 171 s~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~ 250 (539)
++.+|+++|+|+.++.++....+.. .. ..+....|+.+|++++++++.+++++.+++++.... +. ...++.++
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~---~~-~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNT---WD-NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchh---hh-cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 9999999999999988763221110 00 012346899999999999999999988888775322 11 12477888
Q ss_pred HHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEE
Q 009247 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (539)
Q Consensus 251 l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~V 330 (539)
+.++++|+.|+++||.+ +++||+||+++|+|+|+|.++++||+|+++++|++|..+ ++|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~s--~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGKS--PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSSC--SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCC--ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 99999999999999854 489999999999999999999999999999999999984 278899999999999999999
Q ss_pred EECCCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCCcEEEEEeCCC
Q 009247 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (539)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~ 408 (539)
|+++++.. .+ + +. ....+.++|+|+|+++|++. +.+.++++||+.+++ ..++||++++|++
T Consensus 307 I~a~~~~~-~~--p------~~------~~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~--~~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-HL--K------NK------IKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLN--RKSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-TS--T------TS------EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGT--SSSCEEEEEEEGG
T ss_pred EECCCccc-cC--c------cc------ccccceEEEEEEEEeccCcccCCCceEEEEeCCcccC--CCCCEEEEEECCC
Confidence 99887641 11 0 00 01246799999999999976 345788999988765 3578999999999
Q ss_pred CccCCCCcEEEEEEEeecCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceEEEEEe--eEeecCCCCCCc
Q 009247 409 LAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTLLWSAL--YIQDLSLGQFGS 486 (539)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~ 486 (539)
+++||+|+||+|+||..++ .+++++|++++++|... . ...|+++ |. +...+..+|
T Consensus 370 ~~~cp~G~~i~~~st~~e~-~~~~~~l~~~l~~l~~~------------------~---~~~~~~~~~~~-~~~~~~~~~ 426 (475)
T 3p1w_A 370 HGVTLKGKYIAIVSATVET-NNPIKEIEKPLELLGTI------------------E---EKFVKISDLYV-STSKKPADN 426 (475)
T ss_dssp GTSSCTTCEEEEEEEECCS-SCHHHHTHHHHHTTCSE------------------E---EEEEEEEEEEE-ESCSSCTTC
T ss_pred cCcCCCCcEEEEEEeecCC-CCHHHHHHHHHHHhcch------------------h---heeccchheee-ecccCCCCC
Confidence 9999999999999998865 59999999999999742 1 2345444 33 234566799
Q ss_pred EEEcCCCCCCCChHHHHHHHHHHHHHhCCCC-CCCCCC
Q 009247 487 IISTPTPDGNLNYNDLLDATEKLYRKLYPNE-ELFPET 523 (539)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~f~p~~ 523 (539)
|++|++||++++|+.++++|+++|++|+|.+ +|-.+.
T Consensus 427 ~~~~~~~d~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~ 464 (475)
T 3p1w_A 427 IFVTSSYDATSHFETATNDLLQIWENLWGQKLNFDDLN 464 (475)
T ss_dssp EEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC----
T ss_pred EEEeCCCCCccchHHHHHHHHHHHHHHhCCcceecCCC
Confidence 9999999999999999999999999999998 665443
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=8e-48 Score=408.77 Aligned_cols=432 Identities=23% Similarity=0.444 Sum_probs=325.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+.++||||||||++||+||++|+++|++|+|||+|+++||+++|+++++...|+....... ...+..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~----~~~~~~--------- 75 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISK----EERESK--------- 75 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCH----HHHHHH---------
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccc----cCcchh---------
Confidence 3569999999999999999999999999999999999999999999876322222110000 000000
Q ss_pred ccccCCCceEEecCCCeEEecChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHHH
Q 009247 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l~ 179 (539)
+ ...+.|.+++ +|++++.++.+.++|.++|+.+|++|+.++..|++. +|+.+++|.++.+.|.+..+++.+|+.++
T Consensus 76 -~-~~g~~~~~~l-~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 76 -F-GKDRDWNVDL-IPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp -H-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred -c-ccccceeecc-ccceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 1 1235688999 599999999999999999999999999998888765 88999999997788888888888999999
Q ss_pred HHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhHHHHHHHHHH
Q 009247 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~~~ 259 (539)
+|++.+..+....+. ... ..++...|+.+|++++++++.+++++.+.+++...+... ..++..++.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~---~~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~---~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLS---THQ-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYL---QQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGG---GST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGG---GSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCch---hhh-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCcccc---CCchHHHHHHHHHHHH
Confidence 999988765322111 000 012457899999999999999999887766543211100 0134556666777888
Q ss_pred hhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCC
Q 009247 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (539)
Q Consensus 260 s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~~~~~ 339 (539)
++++++. +++.||+||+++|+++|++.+++.||+|+++++|++|..+.+++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 8877764 347799999999999999999999999999999999987521467778886 6889999999986543211
Q ss_pred CCCccchhhhhhhhhhhccCCCCc-eEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCCcEEEEEeCCCCccCCCCc
Q 009247 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (539)
Q Consensus 340 ~l~~~~~~~l~~~~~~l~~~~~~~-~v~r~i~i~~~~l~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~cP~G~ 416 (539)
++ . ... ...+++++++++++. ...+..+++|...++ ..+.+|+.+.+..++.||+|+
T Consensus 302 ~l--------~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 KC--------K----------STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLG--RKSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp GE--------E----------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred hh--------c----------ccCCcceeEEEEEccccCCCCCCccEEEEeCccccC--CCCCEEEEEeCCCCCCCCCCc
Confidence 11 0 122 468888999998863 233567788865544 257899999988778999999
Q ss_pred EEEEEEEeecCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceEEEEE--eeEeecCCCCCCcEEEcCCCC
Q 009247 417 FVLYFSALCDEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTLLWSA--LYIQDLSLGQFGSIISTPTPD 494 (539)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~i~~~~~~~ 494 (539)
+++|++++.+. .++++.|++++++|... ...+|+. .|.+. ..+..+||++|+.+|
T Consensus 362 ~~~~v~~~~~~-~~~~~~l~~~~~~l~~~---------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 418 (453)
T 2bcg_G 362 YLAIISTIIET-DKPHIELEPAFKLLGPI---------------------EEKFMGIAELFEPR-EDGSKDNIYLSRSYD 418 (453)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHGGGCSC---------------------SEEEEEEEEEEEES-SCSTTTSEEECCCCC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhhhH---------------------HHhhccchheeeec-CCCCCCCEEECCCCC
Confidence 99999998865 47788899998887521 0224544 34433 235568999999999
Q ss_pred CCCChHHHHHHHHHHHHHhCCCC-CCCC
Q 009247 495 GNLNYNDLLDATEKLYRKLYPNE-ELFP 521 (539)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~i~~~~-~f~p 521 (539)
.+++||++++++|++|++|+|.+ +|+.
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 446 (453)
T 2bcg_G 419 ASSHFESMTDDVKDIYFRVTGHPLVLKQ 446 (453)
T ss_dssp SCSBSHHHHHHHHHHHHHHHSSCCCCCC
T ss_pred ccccHHHHHHHHHHHHHHHHCCcccccc
Confidence 99999999999999999999776 7874
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=7.3e-46 Score=391.33 Aligned_cols=422 Identities=25% Similarity=0.470 Sum_probs=321.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccc-hhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
+.++||||||+|++||++|++|+++|++|+|+|+++++||+++|++ +.+...+. +.+.. .+..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~-~~~~~-------~~~~-------- 67 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF-QLLEG-------PPET-------- 67 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHT-TCTTC-------CCGG--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhc-cCCCC-------ChhH--------
Confidence 4579999999999999999999999999999999999999999998 53211111 10000 0000
Q ss_pred cccccCCCceEEecCCCeEEecChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHH
Q 009247 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l 178 (539)
+ ...+.|.+|+ ||++++..+.+.++|.++|+.+|++|+.++..|++. +|+.+.+|.+..+.+....++..+|+.+
T Consensus 68 --~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 68 --M-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp --G-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred --h-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 1 1236789999 699999999999999999999999999998877765 8889999999777888888888899999
Q ss_pred HHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhHHHHHHHHH
Q 009247 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (539)
++|++.+..+....+.. .+ ..++...|+.+|+++++.++.+++++.+.+++... ..+ ...++..++.++..|+
T Consensus 143 ~~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~-~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKT---FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT-DDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGG---GT-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchh---cc-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccC-CCc--cCCCHHHHHHHHHHHH
Confidence 99999887653221110 00 11346789999999999999999987766544321 111 1245666777777888
Q ss_pred HhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCC
Q 009247 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (539)
Q Consensus 259 ~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~~~~ 338 (539)
.+++++|. ++++||+||+++|+++|++.++++|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 88777774 3478999999999999999999999999999999999887 67888887 488899999999864432
Q ss_pred CCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCC--CCceEEEeCCCCCCCCCCCcEEEEEeCCCCccCCCCc
Q 009247 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (539)
Q Consensus 339 ~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~cP~G~ 416 (539)
+.. ++ . .....+++++++++++.. .....+.+|...++ ..+.+|+.+.+.+++.||+|+
T Consensus 290 ~~~-------~~----~------~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PDR-------VR----K------AGQVIRIICILSHPIKNTNDANSCQIIIPQNQVN--RKSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GGG-------EE----E------EEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred ccc-------cc----c------cCcceeEEEEEcCcccccCCCceEEEEeCccccC--CCCCEEEEEECCCCcccCCCC
Confidence 111 00 0 123567888888887632 24667788865554 357899999997789999999
Q ss_pred EEEEEEEeecCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceEEEE--EeeEeecCCCCCCcEEEcCCCC
Q 009247 417 FVLYFSALCDEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTLLWS--ALYIQDLSLGQFGSIISTPTPD 494 (539)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~i~~~~~~~ 494 (539)
++++++++++.. ++++.|++++++|... + ..+|+ ..|.+.. .+..+||++|+++|
T Consensus 351 ~~~~~~~~~p~~-~~~~~l~~~~~~l~~~-------------------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~d 407 (433)
T 1d5t_A 351 YIAIASTTVETT-DPEKEVEPALGLLEPI-------------------D--QKFVAISDLYEPID-DGSESQVFCSCSYD 407 (433)
T ss_dssp EEEEEEEECCSS-CHHHHTHHHHTTTCSC-------------------S--EEEEEEEEEEEESC-CSTTTCEEECCCCC
T ss_pred EEEEEEEecCCC-CHHHHHHHHHHHhhhH-------------------H--hheeccceeeeecC-CCCCCCEEECCCCC
Confidence 999999988764 7888899999987521 1 12333 3455433 35669999999999
Q ss_pred CCCChHHHHHHHHHHHHHhCCCC
Q 009247 495 GNLNYNDLLDATEKLYRKLYPNE 517 (539)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~i~~~~ 517 (539)
.+++||+++++++++|++|+|++
T Consensus 408 ~~~~~e~~~~~~~~~~~~~~~~~ 430 (433)
T 1d5t_A 408 ATTHFETTCNDIKDIYKRMAGSA 430 (433)
T ss_dssp SCSBSHHHHHHHHHHHHHHHSSC
T ss_pred ccccHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999976
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=9.8e-31 Score=280.89 Aligned_cols=342 Identities=14% Similarity=0.128 Sum_probs=201.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
.+|||||||++||+||++|+++|++|+|||+++++||+++|++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~----------------------------------- 46 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ----------------------------------- 46 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC-----------------------------------
Confidence 479999999999999999999999999999999999999997654
Q ss_pred cCCCceEEecCCCeEEecChHHHHHHHhcC--ccccccceecccee-eEccCCceeecCCCHHHhhhc-cCCChHHHHHH
Q 009247 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATF-MLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (539)
Q Consensus 103 ~~~~~~~~dl~Gp~ll~~~~~l~~~l~~~~--~~~y~ef~~~~~~~-~~~~~g~~~~vp~s~~~~f~~-~~ls~~~k~~l 178 (539)
+|.+|. ||+++...+.+.+++...+ +.+++++..++..+ +...+|+.+.++.+....... ..+++.+...+
T Consensus 47 ----G~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 47 ----GFTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp ----TEEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred ----CEEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 356777 5887766655556665544 56788888887766 333478888888776543321 23456777778
Q ss_pred HHHHHHHhcccccCcc------cccccc---ccccc----cCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCchhhhhh
Q 009247 179 MRFFKLVQGHLSLDES------EENNVR---ISEED----LDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~------~~~~~~---~~~~~----~~~s~~~~l~~~~l~~~l~~~~~~-~i~l~~~~~~~~~~~ 244 (539)
.+|++.++........ .....+ ..... ...++.++++++..++.++.++.+ ++.... ... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~-~p~----~ 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGG-NPF----A 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHS-CC------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCC-Ccc----h
Confidence 8887766543221100 000000 00011 113667888887778888887643 222211 111 1
Q ss_pred hcchhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcE
Q 009247 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (539)
Q Consensus 245 ~s~~~~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~ 324 (539)
.+... .+..++. ...| .+||+||++.|+++|++.++.+||+|++|++|++|.++ ++++++|++++|++
T Consensus 197 ~~~~~---~~~~~~~--~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSIY---TLIHALE--REWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCTH---HHHHHHH--SCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhhh---hhhhhhh--ccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 12211 1111211 2223 57999999999999999999999999999999999998 88999999999999
Q ss_pred EEcCEEEEC--CCCCCCCCCccchhhhhhh-hhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCC-----------
Q 009247 325 ILSHKLVLD--PSFTVPGSLASSHQQLQES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPR----------- 390 (539)
Q Consensus 325 i~a~~VI~~--p~~~~~~l~~~~~~~l~~~-~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~----------- 390 (539)
+.||.||++ |..++..|+.. . +.+.. .+.+.............+.++.+...... ..+.+.+.
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll~~-~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~-~~i~~~~~~~~~~~~~~~~ 341 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLLSQ-H-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAH-HTVCFGPRYRELIDEIFNH 341 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCTTSCS-EEEEEECC-----------
T ss_pred EEcCEEEECCCHHHHHHHhccc-c-ccchhhhhhhhccccCCceeEEEecccCCcccccc-ceeccccchhhhccccccc
Confidence 999999974 44554455321 1 11111 11121111112223333335665543332 23333221
Q ss_pred -CCCCCCCCcEEEEEeCCC-CccCCCCcEEEEEEEeec
Q 009247 391 -SLFPEQVTSIRVLQLGGN-LAVCPLGMFVLYFSALCD 426 (539)
Q Consensus 391 -~~~~~~~~~v~v~~~~~~-~~~cP~G~~vi~~st~~~ 426 (539)
.++ ..+.+|+.+.+.. +..+|+|+.++++.+..+
T Consensus 342 ~~~~--~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p 377 (501)
T 4dgk_A 342 DGLA--EDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVP 377 (501)
T ss_dssp --CC--CEEEEEEECGGGTCGGGSSTTCEEEEEEEEEC
T ss_pred cccc--cCCceecccCCCCCCCcCCCCCceEEEEEecC
Confidence 111 2356777777654 589999999998887664
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.94 E-value=1.5e-24 Score=227.73 Aligned_cols=391 Identities=12% Similarity=0.096 Sum_probs=228.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||++|+++|++|+|||+++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5899999999999999999999999999999999999999976543
Q ss_pred cCCCceEEecCCCeEEec---ChHHHHHHHhcCccccccceeccceeeEcc-C--------CceeecCCCHHHhhhccCC
Q 009247 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDA-D--------AKLCSVPDSRAAIFKDKSL 170 (539)
Q Consensus 103 ~~~~~~~~dl~Gp~ll~~---~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~-~--------g~~~~vp~s~~~~f~~~~l 170 (539)
|.+|. ||..+.. ...+.+++.+.|....+.... .....+.. + ++.+.++. . ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFND----F--PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGG----G--GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhh----h--hhhC
Confidence 33343 3433221 124566666666543222111 11111110 1 33333321 1 1345
Q ss_pred ChHHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCchhhhhhhcchh
Q 009247 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRD 249 (539)
Q Consensus 171 s~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~-~i~l~~~~~~~~~~~~s~~~ 249 (539)
++.++..+.+.+..... ....+.++.+|++++..++.++.++.. .......+. ..++...
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKS----DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCG----GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCc----ccchHHH
Confidence 66777666554432211 012357899999986556666665421 111111121 2345544
Q ss_pred HHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009247 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (539)
Q Consensus 250 ~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~ 329 (539)
.+..+..+. .++. ..+|++|++.|+++|.+.++..|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~~----~~~~----~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENMY----RFGG----TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHHH----HHCS----CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHHH----hcCC----ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 444443321 2231 46899999999999999999999999999999999987 678888887 588999999
Q ss_pred EEEC-CCCCCCCCCccch-hhhhh-hhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCCcEEEEEeC
Q 009247 330 LVLD-PSFTVPGSLASSH-QQLQE-SFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLG 406 (539)
Q Consensus 330 VI~~-p~~~~~~l~~~~~-~~l~~-~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~ 406 (539)
||++ |.+...+|+.... .+.+. .++.+.. .......+..+.+++++.. ...+.+++.. .....+...+
T Consensus 244 VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~v~l~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~s 314 (425)
T 3ka7_A 244 VISNLGHAATAVLCSEALSKEADAAYFKMVGT-LQPSAGIKICLAADEPLVG---HTGVLLTPYT-----RRINGVNEVT 314 (425)
T ss_dssp EEECSCHHHHHHHTTTTCCTTTTHHHHHHHHH-CCCBEEEEEEEEESSCSSC---SSSEEECCSS-----SSEEEEECGG
T ss_pred EEECCCHHHHHHhcCCcccccCCHHHHHHhhC-cCCCceEEEEeecCCCccC---cCEEEECCCh-----hhcceEEecc
Confidence 9974 3332233332110 00011 1122211 1233344555557777532 2333444321 1222344443
Q ss_pred C-CCccCCCCcEEEEEEEeecCc--cchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceEEEEEeeE----eec
Q 009247 407 G-NLAVCPLGMFVLYFSALCDEV--NQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTLLWSALYI----QDL 479 (539)
Q Consensus 407 ~-~~~~cP~G~~vi~~st~~~~~--~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~ 479 (539)
. ++..+|+|+.+++++...... +..+++++.+++.|...... .++.++.--.|. |..
T Consensus 315 ~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~----------------~~~~~~~v~~~~~~~P~~~ 378 (425)
T 3ka7_A 315 QADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPG----------------KRYEVLLIQSYHDEWPVNR 378 (425)
T ss_dssp GTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTT----------------CCEEEEEEEEEBTTBCSBS
T ss_pred CCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCC----------------CceEEEEEEEECCCccccc
Confidence 3 468999999999887654321 12246677777777765311 112222111111 100
Q ss_pred --------CCCCCCcEEEcCCCCCC---CChHHHHHHHHHHHHHhCC
Q 009247 480 --------SLGQFGSIISTPTPDGN---LNYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 480 --------~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~i~~ 515 (539)
.....+|+++|...... +..++++.+|+++.++|+|
T Consensus 379 ~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 379 AASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp SCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred cccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 11223699999997766 9999999999999999875
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.94 E-value=1.1e-24 Score=228.49 Aligned_cols=383 Identities=12% Similarity=0.101 Sum_probs=226.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||+.|+++|++|+||||++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g---------------------------------- 46 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG---------------------------------- 46 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----------------------------------
Confidence 4899999999999999999999999999999999999999976543
Q ss_pred cCCCceEEecCCCeEEec---ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHHH
Q 009247 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 103 ~~~~~~~~dl~Gp~ll~~---~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l~ 179 (539)
|.+|. ||+.+.. ...+.+++.+.+.. .++...+....+..+|+.+.+|... ..+++.++..+.
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 47 -----FQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp -----EEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred -----EEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 44555 4554432 23566777777663 3444443332222267777776432 235666776666
Q ss_pred HHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCC-hhHHHHHHH-HHhcccCCchhhhhhhcchhHHHHHHHH
Q 009247 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLP-HKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~-~~l~~~~~~-~i~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (539)
+++...... . ....+.++.+|+++++++ +.++.++.. ......... ..++..+.+..+..+
T Consensus 113 ~~~~~~~~~--~-----------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMN--K-----------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL----SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTT--C-----------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCG----GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhc--c-----------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCc----ccCCHHHHHHHHHHH
Confidence 655443321 0 012347899999987444 444554321 111111111 234555555544433
Q ss_pred HHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCC
Q 009247 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (539)
Q Consensus 258 ~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~-p~~ 336 (539)
. .++. +.+|++|+++|+++|++.++..|++|+++++|++|..+ ++++ | +.+|++++||+||++ +..
T Consensus 176 ~----~~~g----~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V-~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWGG----PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--Y-TRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHCS----CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--E-ETTCCEEECSEEEECSCHH
T ss_pred h----hcCC----cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--E-EeCCcEEEeCEEEECCCHH
Confidence 2 2231 56999999999999999999999999999999999875 5665 6 468889999999974 333
Q ss_pred CCCCCCccchhhhhhh-hhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCCcEEEEEeC-CCCccCCC
Q 009247 337 TVPGSLASSHQQLQES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLG-GNLAVCPL 414 (539)
Q Consensus 337 ~~~~l~~~~~~~l~~~-~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~-~~~~~cP~ 414 (539)
...+|+. .+.++.. .+.+.+. .........+.++++.. ....+ .+++.. . .-.+...+ .++..+|+
T Consensus 243 ~~~~ll~--~~~~~~~~~~~~~~~-~~~~~~~v~l~~~~~~~--~~~~~-~~~~~~-----~-~~~i~~~s~~~p~~ap~ 310 (421)
T 3nrn_A 243 ETVKLIG--RDYFDRDYLKQVDSI-EPSEGIKFNLAVPGEPR--IGNTI-VFTPGL-----M-INGFNEPSALDKSLARE 310 (421)
T ss_dssp HHHHHHC--GGGSCHHHHHHHHTC-CCCCEEEEEEEEESSCS--SCSSE-EECTTS-----S-SCEEECGGGTCGGGSCT
T ss_pred HHHHhcC--cccCCHHHHHHHhCC-CCCceEEEEEEEcCCcc--cCCeE-EEcCCc-----c-eeeEeccCCCCCCcCCC
Confidence 2233321 1112221 1122111 22234444455666532 12223 344321 1 11233333 33578999
Q ss_pred CcEEEEEEEeecCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceE--EEEEeeEee-------cCCCCCC
Q 009247 415 GMFVLYFSALCDEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTL--LWSALYIQD-------LSLGQFG 485 (539)
Q Consensus 415 G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~-------~~~~~~~ 485 (539)
|+.+++++...... +.++.++.+++.|..... . .++.. .|.--+-|. ...+. +
T Consensus 311 G~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~p-~---------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~ 372 (421)
T 3nrn_A 311 GYTLIMAHMALKNG-NVKKAIEKGWEELLEIFP-E---------------GEPLLAQVYRDGNPVNRTRAGLHIEWPL-N 372 (421)
T ss_dssp TEEEEEEEEECTTC-CHHHHHHHHHHHHHHHCT-T---------------CEEEEEEEC-------------CCCCCC-S
T ss_pred CceEEEEEEeeccc-cHHHHHHHHHHHHHHHcC-C---------------CeEEEeeeccCCCCcccccCCCCCCCCC-C
Confidence 99999998876543 334567888888887642 1 01100 111111111 11234 8
Q ss_pred cEEEcCCCCCCC-Ch--HHHHHHHHHHHHHh
Q 009247 486 SIISTPTPDGNL-NY--NDLLDATEKLYRKL 513 (539)
Q Consensus 486 ~i~~~~~~~~~~-~~--~~~~~~~~~~~~~i 513 (539)
++++|....... .+ ++++.+++++.++|
T Consensus 373 gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 373 EVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred cEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 999999987777 56 99999999999999
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.93 E-value=5.9e-24 Score=226.71 Aligned_cols=407 Identities=15% Similarity=0.133 Sum_probs=235.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||..|+++|++|+|||+++++||+++|++.++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g-------------------------------- 62 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG-------------------------------- 62 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC--------------------------------
Confidence 358999999999999999999999999999999999999999976532
Q ss_pred cccCCCceEEecCCCeEEec-ChHHHHHHHhcCcccccccee--ccceeeEccCCceeecCCCHHHhhhccCCChHHHHH
Q 009247 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS--IDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~--~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~ 177 (539)
+.+|+ |++++.. ...+.+++.+.|+...+.+.. ....+++. +|+.+.+|.+..+.+....+++.++..
T Consensus 63 -------~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~ 133 (478)
T 2ivd_A 63 -------YLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLR 133 (478)
T ss_dssp -------EEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHH
T ss_pred -------eeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHH
Confidence 44566 5777655 346778888888876554332 11234443 788888898876666655555444433
Q ss_pred HHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCchhhhhhhcchhHHHHHHH
Q 009247 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLAL 256 (539)
Q Consensus 178 l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~-~i~l~~~~~~~~~~~~s~~~~l~~~~~ 256 (539)
+ + ...... . .....+.++.+|+++..-++.++.++.. .-.....+. .++++...+..+..
T Consensus 134 ~---~---~~~~~~-~--------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~ 194 (478)
T 2ivd_A 134 V---A---GELFSR-R--------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDV----EQLSVAATFPMLVK 194 (478)
T ss_dssp H---H---GGGGCC-C--------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCCCT----TTBBHHHHCHHHHH
T ss_pred H---h---hhhhcC-C--------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecCCH----HHhhHHHHhHHHHH
Confidence 2 1 121110 0 0124568999999874323333333321 111111111 23455444444333
Q ss_pred HHHhhcc------------------ccCC---CcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEE
Q 009247 257 YNSSIGR------------------FQNA---LGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYK 315 (539)
Q Consensus 257 ~~~s~g~------------------~g~~---~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~ 315 (539)
+....+. .+.. .+.+.+|++|++.|+++|++.+ |++|+++++|++|..+ +++ +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~ 268 (478)
T 2ivd_A 195 MEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-W 268 (478)
T ss_dssp HHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-C
T ss_pred HHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-E
Confidence 2211100 0000 0226799999999999998754 7899999999999876 444 5
Q ss_pred EEEe---CCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCC
Q 009247 316 GVRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRS 391 (539)
Q Consensus 316 gV~l---~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~ 391 (539)
+|++ .+|++++||+||++ |...+.+++ ++++..+...........+.+..+.+++++-+.+....+.+|...
T Consensus 269 ~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll----~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~ 344 (478)
T 2ivd_A 269 RLIIEEHGRRAELSVAQVVLAAPAHATAKLL----RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEE 344 (478)
T ss_dssp EEEEEETTEEEEEECSEEEECSCHHHHHHHH----TTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGG
T ss_pred EEEEeecCCCceEEcCEEEECCCHHHHHHHh----hccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCC
Confidence 6877 78889999999975 333222332 123322222112223456677777788875333223334445321
Q ss_pred CCCCCCCcEEEEEeCC-CCccCCCCcEEEEEEEeecCc-----cchHHHHHHHHHHHHhhhhcCCCCCCCCccccccccc
Q 009247 392 LFPEQVTSIRVLQLGG-NLAVCPLGMFVLYFSALCDEV-----NQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEA 465 (539)
Q Consensus 392 ~~~~~~~~v~v~~~~~-~~~~cP~G~~vi~~st~~~~~-----~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 465 (539)
- .....+...+. .+..+|+|..++.+....... .+.++..+.+++.|....... .
T Consensus 345 ~----~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~ 405 (478)
T 2ivd_A 345 Q----RRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT---------------A 405 (478)
T ss_dssp C----CSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC---------------S
T ss_pred C----CceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC---------------C
Confidence 0 11223333222 245678898776555433221 234556666666666543211 0
Q ss_pred Cce----EEEEEeeEeecCC------------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCCC
Q 009247 466 KPT----LLWSALYIQDLSL------------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYPN 516 (539)
Q Consensus 466 ~~~----~l~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 516 (539)
+|. .-|.--|.+.... ...+++++|+.-......++|+.+++++.++|...
T Consensus 406 ~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~gA~~SG~~aA~~i~~~ 472 (478)
T 2ivd_A 406 RPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGLNDCIRNAAQLADALVAG 472 (478)
T ss_dssp CCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSHHHHHHHHHHHHHHHCC-
T ss_pred CCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 111 1232211111000 01368999998765678999999999999999764
No 9
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.92 E-value=7.4e-23 Score=217.26 Aligned_cols=403 Identities=12% Similarity=0.135 Sum_probs=225.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (539)
++||||||||++||+||++|+++| ++|+|||+++++||+++|....+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999966432
Q ss_pred ccccccccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCH--------HHhhh
Q 009247 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (539)
Q Consensus 96 ~~~~~~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~--------~~~f~ 166 (539)
+.+|. |++.+.. ...+.+++.+.|+...+........+++. +|++..+|... ..+++
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 23454 4654433 34677888888887655433233345554 67777766431 12222
Q ss_pred ccCCChHHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCchhhhhhh
Q 009247 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVL 245 (539)
Q Consensus 167 ~~~ls~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~-~i~l~~~~~~~~~~~~ 245 (539)
...++..++... ....... . .....+.++.+|+++..-.+....++.. ...+ +..+. .++
T Consensus 124 ~~~~~~~~~~~~--~~~~~~~-----~--------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~ 184 (470)
T 3i6d_A 124 TGLFSLSGKARA--AMDFILP-----A--------SKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGI--YAGDI--DKL 184 (470)
T ss_dssp ------CCSHHH--HHHHHSC-----C--------CSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHT--TCSCT--TTB
T ss_pred cCcCCHHHHHHH--hcCcccC-----C--------CCCCCCcCHHHHHHHhcCHHHHHHhccchhcEE--ecCCH--HHh
Confidence 222222222111 1111110 0 1234568999999874322223332221 1122 22221 223
Q ss_pred cchhHHHHHHHHHHhhccc--c---------------CCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEe
Q 009247 246 KTRDGINRLALYNSSIGRF--Q---------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (539)
Q Consensus 246 s~~~~l~~~~~~~~s~g~~--g---------------~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~ 308 (539)
++...+..+..+....+.. + ...+.+.++++|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 185 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 262 (470)
T 3i6d_A 185 SLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS 262 (470)
T ss_dssp BHHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc
Confidence 4433322221111100000 0 00123778999999999988764432 799999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCC-CCceEEE
Q 009247 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVI 386 (539)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~-~~~~~~~ 386 (539)
+++ +.|++.+|++++||+||+. |...+.+++. ++++....+. ..+..+.+..+.+++++-+. .....+.
T Consensus 263 --~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~--~~~~~~~~~~----~~~~~~~~v~l~~~~~~~~~~~~~~g~l 333 (470)
T 3i6d_A 263 --GSC-YSLELDNGVTLDADSVIVTAPHKAAAGMLS--ELPAISHLKN----MHSTSVANVALGFPEGSVQMEHEGTGFV 333 (470)
T ss_dssp --SSS-EEEEESSSCEEEESEEEECSCHHHHHHHTT--TSTTHHHHHT----CEEEEEEEEEEEESSTTCCCSSCSSEEE
T ss_pred --CCe-EEEEECCCCEEECCEEEECCCHHHHHHHcC--CchhhHHHhc----CCCCceEEEEEEECchhcCCCCCCeEEE
Confidence 444 4688889989999999974 4333233321 1222222222 23556677777788876432 2233445
Q ss_pred eCCCCCCCCCCCcEEEEEeCC--CCccCCCCcEEEEEEEeecC-----ccchHHHHHHHHHHHHhhhhcCCCCCCCCccc
Q 009247 387 FPPRSLFPEQVTSIRVLQLGG--NLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKLLVTGTAGNSSTAQS 459 (539)
Q Consensus 387 ~p~~~~~~~~~~~v~v~~~~~--~~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 459 (539)
+|... ...+....+.+ ....+|.|..++.+...... ..+.++.++.+++.|.......
T Consensus 334 ~~~~~-----~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---------- 398 (470)
T 3i6d_A 334 ISRNS-----DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN---------- 398 (470)
T ss_dssp ECSTT-----CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCC----------
T ss_pred ccCCC-----CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCC----------
Confidence 55432 12233333322 24568989887776653221 1245677777777777654211
Q ss_pred ccccccCc----eEEEEEeeEeecCC-------------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCC
Q 009247 460 EDMEEAKP----TLLWSALYIQDLSL-------------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 460 ~~~~~~~~----~~l~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 515 (539)
..| ..-|.--+-+.... ...++|++|.........++++.+++++.++|..
T Consensus 399 -----~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 399 -----GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp -----SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHH
Confidence 122 23454322221110 1236899999977788899999999999988853
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.91 E-value=3.1e-22 Score=213.29 Aligned_cols=412 Identities=14% Similarity=0.130 Sum_probs=236.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (539)
|.++||||||||++||+||+.|+++| ++|+|||+++++||+++|....+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 44689999999999999999999999 99999999999999999866432
Q ss_pred ccccccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCC--------HHHhhhcc
Q 009247 98 SRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (539)
Q Consensus 98 ~~~~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s--------~~~~f~~~ 168 (539)
|.+|. |++.+.. ...+.+++.+.|+...+.+......+++. +|++..+|.. ...+++..
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 23444 4554433 34677888888887655433233345554 6777776643 34555666
Q ss_pred CCChHHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcch
Q 009247 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (539)
Q Consensus 169 ~ls~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~ 248 (539)
.++..+|..+..++ ..... . ......+.++.+|+++. +.+.+.+.+...+....+..+. .++++.
T Consensus 121 ~~~~~~~~~~~~~~---~~~~~--~-------~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQEVADLL---LHPSD--S-------LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHHHHHHH---HSCCT--T-------CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCT--TTSBST
T ss_pred CCChhHHHHhhCcc---cCCcc--c-------ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCCh--HHcCHH
Confidence 67766665222222 11100 0 01134568999999873 2333333222111111122221 234554
Q ss_pred hHHHHHHHHHHhhccc-------c-------------CCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEe
Q 009247 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (539)
Q Consensus 249 ~~l~~~~~~~~s~g~~-------g-------------~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~ 308 (539)
..+..+..+....+.+ . ...+.+.++++|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444443322211110 0 00133788999999999988765432 799999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEe
Q 009247 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (539)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~ 387 (539)
+++ +.|++.+| +++||+||+. |.+.+.+++. ++++ +. + ....+..+.+..+.+++++........+.+
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~--~~~~-~~---~-~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLLP--DAHL-PE---L-EQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHCT--TSCC-HH---H-HTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHcC--ccCH-HH---H-hcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 455 45888888 7999999974 4433233321 1111 11 1 122355667777778988722222334455
Q ss_pred CCCCCCCCCCCcEEEEEeCCC--CccCCCCcEEEEEEEeecC-----ccchHHHHHHHHHHHHhhhhcCCCCCCCCcccc
Q 009247 388 PPRSLFPEQVTSIRVLQLGGN--LAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKLLVTGTAGNSSTAQSE 460 (539)
Q Consensus 388 p~~~~~~~~~~~v~v~~~~~~--~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 460 (539)
|+.. ...+....+.+. ....|. ..++.+...... ..+.++.++.+++.|....... .+
T Consensus 333 ~~~~-----~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~-~~-------- 397 (475)
T 3lov_A 333 NRRA-----PYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRT-LE-------- 397 (475)
T ss_dssp CTTS-----SCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSC-CC--------
T ss_pred cCCC-----CCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCC-CC--------
Confidence 5432 123333333322 345666 555544442221 1234566777777776654311 00
Q ss_pred cccccCceEEEEEeeEeecCC-------------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCCCC
Q 009247 461 DMEEAKPTLLWSALYIQDLSL-------------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYPNE 517 (539)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 517 (539)
+...-..-|+--+-+.... ...++++++..-....+.++++.+++++.++|....
T Consensus 398 --p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 398 --PKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp --CSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSHHHHHHHHHHHHHHHHHTC
T ss_pred --CeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 0001123455332221110 123689999987777889999999999999998764
No 11
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.91 E-value=7.5e-23 Score=218.01 Aligned_cols=413 Identities=13% Similarity=0.064 Sum_probs=231.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
+||||||||++||+||++|+++|+ +|+|||+++++||+++++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999986432
Q ss_pred cccCCCceEEecCCCeEEecC----hHHHHHHHhcCcccccccee-----ccceeeEccCCceeecCCCHHHhhhccCCC
Q 009247 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKDKSLG 171 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~~----~~l~~~l~~~~~~~y~ef~~-----~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls 171 (539)
.+|.+|. ||+.+... ..+.+++.+.|+...+.... ....+++. +|+++++|.+...++.. +.
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~--~~ 120 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRP--SP 120 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---C--CT
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccc--cc
Confidence 1244565 57765443 24667777888764433221 11235554 78888888764333321 11
Q ss_pred hHHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhHH
Q 009247 172 LMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGI 251 (539)
Q Consensus 172 ~~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~l 251 (539)
+..+..+.+.+. .... + .....+.++.+|+++. +...+.+.+...+....+..+. .+++....+
T Consensus 121 ~~~~~~~~~~~~---~~~~--~--------~~~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~~ls~~~~~ 184 (477)
T 3nks_A 121 PFSKPLFWAGLR---ELTK--P--------RGKEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNS--RELSIRSCF 184 (477)
T ss_dssp TSCSCSSHHHHT---TTTS--C--------CCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCT--TTBBHHHHC
T ss_pred hhhhHHHHHHHH---hhhc--C--------CCCCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCH--HHhhHHHHH
Confidence 111111112111 1110 0 0123467999999862 2223222221111000011111 234555544
Q ss_pred HHHHHHHHhhccc--------c--------------CCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEec
Q 009247 252 NRLALYNSSIGRF--------Q--------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQ 309 (539)
Q Consensus 252 ~~~~~~~~s~g~~--------g--------------~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~ 309 (539)
..+..+....+.. + .....++++++|++.|+++|++.+...|++|+++++|++|..+
T Consensus 185 ~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~- 263 (477)
T 3nks_A 185 PSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ- 263 (477)
T ss_dssp HHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-
T ss_pred HHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-
Confidence 4433321111100 0 0011267899999999999999999999999999999999876
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeC
Q 009247 310 NSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFP 388 (539)
Q Consensus 310 ~~g~~~gV~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p 388 (539)
+++.+.|++ +|+++.||+||+. |.+.+.+++.+..+++. ..+.+ ..+..+....+.+++++-+.. ..-..+|
T Consensus 264 -~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~---~~l~~-~~~~~~~~v~l~~~~~~~~~~-~~g~l~~ 336 (477)
T 3nks_A 264 -AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLA---RALSA-ITAVSVAVVNLQYQGAHLPVQ-GFGHLVP 336 (477)
T ss_dssp -GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHH---HHHHT-CCEEEEEEEEEEETTCCCSSC-SSEEECC
T ss_pred -CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHH---HHHhc-CCCCcEEEEEEEECCCCCCCC-CceEEcc
Confidence 444356765 6678999999974 44333343322222222 22221 234455566666788764433 2344455
Q ss_pred CCCCCCCCCCcEEEEEeCCC--CccC-CCCcEEEEEEEeec---------CccchHHHHHHHHHHHHhhhhcCCCCCCCC
Q 009247 389 PRSLFPEQVTSIRVLQLGGN--LAVC-PLGMFVLYFSALCD---------EVNQGKKLLHAALSALQKLLVTGTAGNSST 456 (539)
Q Consensus 389 ~~~~~~~~~~~v~v~~~~~~--~~~c-P~G~~vi~~st~~~---------~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 456 (539)
+.. ...+....+.+. ++.. |+|..++.+..-.. ...+.++.++.+++.|....... .+
T Consensus 337 ~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~---- 406 (477)
T 3nks_A 337 SSE-----DPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLK-EM---- 406 (477)
T ss_dssp TTT-----CSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCC-SC----
T ss_pred CCC-----CCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCC-CC----
Confidence 432 122333344332 2222 33777776654221 01145667777777776643211 00
Q ss_pred cccccccccCceEEEEEeeEeecCC-------------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCCCC
Q 009247 457 AQSEDMEEAKPTLLWSALYIQDLSL-------------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYPNE 517 (539)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 517 (539)
...--...|.--+-|.... ....++++|..--...+.++++.+++++.++|.+++
T Consensus 407 ------~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 407 ------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp ------CSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ------CcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhcc
Confidence 0001122455444443211 113579999987778899999999999999998753
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.91 E-value=6.7e-22 Score=212.27 Aligned_cols=419 Identities=13% Similarity=0.084 Sum_probs=232.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||+|++||+||+.|+++|++|+|||+++++||+++|+..++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g-------------------------------- 59 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG-------------------------------- 59 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT--------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC--------------------------------
Confidence 468999999999999999999999999999999999999999865432
Q ss_pred cccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceecc-ceeeEccCCceeecCCCHHHhhhccCCChHHHHHH
Q 009247 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~-~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l 178 (539)
|.+|. |++++.. ...+.+++.+.|+...+.|.... ..+++. +|+.+.+|.+...++....++..+|..+
T Consensus 60 -------~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 130 (504)
T 1sez_A 60 -------LIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIAR-NGTPVLLPSNPIDLIKSNFLSTGSKLQM 130 (504)
T ss_dssp -------EEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEES-SSSEEECCSSHHHHHHSSSSCHHHHHHH
T ss_pred -------eEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEEE-CCeEEECCCCHHHHhccccCCHHHHHHH
Confidence 44565 5776643 34677888889987766664322 234443 7888888988766666555665554432
Q ss_pred HHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHhcccCCchhhhhhhcchhHHHHHHHH
Q 009247 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~-~~i~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (539)
.. ..+...... . . .....+.++.+|+++..-++.++.++. +..... ..++ .++++...+..+..+
T Consensus 131 ~~--~~~~~~~~~-~-----~--~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~~~~~~~~~ 196 (504)
T 1sez_A 131 LL--EPILWKNKK-L-----S--QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTC--GGDP--DSLSMHHSFPELWNL 196 (504)
T ss_dssp HT--HHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHH--SCCG--GGSBHHHHCHHHHHH
T ss_pred hH--hhhccCccc-c-----c--ccCCCCccHHHHHHHHcCHHHHHHHHHHHHcccc--CCCh--HHhhHHHHhHHHHHH
Confidence 21 111110000 0 0 012345899999986422233333332 111111 1111 234444333222211
Q ss_pred HH-----------h-hccccC-------------CCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCC
Q 009247 258 NS-----------S-IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNS 311 (539)
Q Consensus 258 ~~-----------s-~g~~g~-------------~~~~~~~p~gG~geL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~ 311 (539)
.. . +...+. ....+++++||++.|+++|++ ..| ++|++|++|++|..+ +
T Consensus 197 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~--~ 271 (504)
T 1sez_A 197 EKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS--C 271 (504)
T ss_dssp HHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE--C
T ss_pred HHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec--C
Confidence 11 0 111000 001256899999999998875 456 789999999999887 3
Q ss_pred Cc-----EEEEEeC--CC---cEEEcCEEEEC-CCCCCCCCCcc-chhhhhhhhhhhccCCCCceEEEEEEEecCCC-CC
Q 009247 312 GS-----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLAS-SHQQLQESFQAFSLSDNKGKVARGICITRSSL-KP 378 (539)
Q Consensus 312 g~-----~~gV~l~--~G---~~i~a~~VI~~-p~~~~~~l~~~-~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l-~~ 378 (539)
++ .+.|++. +| ++++||+||++ |...+.+++.. ..++++..+ + .......+.+..+.+++++ ..
T Consensus 272 ~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~--l-~~~~~~~~~~v~l~~~~~~~~~ 348 (504)
T 1sez_A 272 TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF--I-PEVDYVPLSVVITTFKRENVKY 348 (504)
T ss_dssp SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT--S-CCCCEEEEEEEEEEEEGGGBSS
T ss_pred CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH--H-hcCCCCceEEEEEEEchhhcCC
Confidence 33 1456553 46 67899999975 43333344310 001111110 1 1112334566666677764 22
Q ss_pred CCCceEEEeCCCCCCCCCCCcEEEEEeC--CCCccCCCCcEEEEEEEeecC-----ccchHHHHHHHHHHHHhhhhcCCC
Q 009247 379 DLSNFLVIFPPRSLFPEQVTSIRVLQLG--GNLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKLLVTGTA 451 (539)
Q Consensus 379 ~~~~~~~~~p~~~~~~~~~~~v~v~~~~--~~~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~~~~~~~~ 451 (539)
......+.+|...... ...++...++ ..+..+|+|+.++...+.... ..+.++.++.+++.|........
T Consensus 349 ~~~~~~~l~~~~~~~~--g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~- 425 (504)
T 1sez_A 349 PLEGFGVLVPSKEQQH--GLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG- 425 (504)
T ss_dssp CCCSSEEECCGGGGGG--TCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS-
T ss_pred CCCceEEEcCCCCCCC--CCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC-
Confidence 2223455566422100 0011111222 234567999877665543321 12345677777777766543210
Q ss_pred CCCCCcccccccccCceEEEEEeeEeecCC------------CCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCC
Q 009247 452 GNSSTAQSEDMEEAKPTLLWSALYIQDLSL------------GQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 515 (539)
+ ...--..-|.--|.+.... ...++|++++.-......++++.+++++.++|..
T Consensus 426 ~----------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il~ 491 (504)
T 1sez_A 426 E----------PTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVIS 491 (504)
T ss_dssp C----------CSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred C----------CeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0000122454333332110 1237899999877778899999999999988864
No 13
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.91 E-value=1.3e-21 Score=211.00 Aligned_cols=295 Identities=14% Similarity=0.089 Sum_probs=180.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||..|+++|++|+|||+++++||+++|++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~--------------------------------- 49 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ--------------------------------- 49 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT---------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC---------------------------------
Confidence 45899999999999999999999999999999999999999997642
Q ss_pred cccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHHH
Q 009247 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l~ 179 (539)
..+.+|+ |++++.. ...+.+++.+.|+..+..+... ..+.+ .+|+.+.++.. +. ..+++.+...+.
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~-~~~~~-~~g~~~~~~~~----~p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 50 -----KVKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVE-RLIHH-VKGKSYPFRGP----FP-PVWNPITYLDHN 116 (520)
T ss_dssp -----TTSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSS-EEEEE-ETTEEEEECSS----SC-CCCSHHHHHHHH
T ss_pred -----CCccccc-CceEecCCcHHHHHHHHHcCCcceecccCC-ceEEE-ECCEEEEecCC----CC-CCCCHHHHHHHH
Confidence 1233566 5777644 3467778888888665443322 11222 25665555432 00 012333333344
Q ss_pred HHHHHHhcccccCccccc-cccccccccCCcHHHHHHhcCCChhHHHHHHHHH-hcccCCchhhhhhhcchhHHHHHHHH
Q 009247 180 RFFKLVQGHLSLDESEEN-NVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i-~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (539)
+++..+............ ......++.+.++.+|+++...++.++.++.... ... ..++ .++++...+. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--g~~~--~~~s~~~~~~----~ 188 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCV--TAET--HEVSALWFLW----Y 188 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHH--SSCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhc--CCCh--HHhHHHHHHH----H
Confidence 444333222111000000 0001123567899999999888888877654211 111 1111 2345544332 3
Q ss_pred HHhhccc----cC-CCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 258 NSSIGRF----QN-ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 258 ~~s~g~~----g~-~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
+...+.+ .. ..+...++++|++.|+++|++. .|++|++|++|++|..+ ++++. |++.+|+++.||+||+
T Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v~-v~~~~g~~~~ad~VI~ 262 (520)
T 1s3e_A 189 VKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENVL-VETLNHEMYEAKYVIS 262 (520)
T ss_dssp HHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSEE-EEETTSCEEEESEEEE
T ss_pred HhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeEE-EEECCCeEEEeCEEEE
Confidence 3222110 00 0122568999999999988764 38899999999999875 55554 8888999999999997
Q ss_pred C-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCC
Q 009247 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (539)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~ 377 (539)
+ |...+.++. +++++|..+....+...++.+.+..+.+++++-
T Consensus 263 a~p~~~l~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 263 AIPPTLGMKIH--FNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp CSCGGGGGGSE--EESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CCCHHHHccee--eCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 4 443334432 445666655544444456778888888888863
No 14
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.90 E-value=1.2e-21 Score=207.42 Aligned_cols=292 Identities=11% Similarity=0.105 Sum_probs=171.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+.++||||||+|++||+||..|+++|++|+|||+++++||++.++...+
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 4568999999999999999999999999999999999999999866432
Q ss_pred ccccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHH
Q 009247 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l 178 (539)
+.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+.+.+.... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 23344 3454432 346777888888876555443222222 2125544442210 01122222222
Q ss_pred HHHHHHHhc----ccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhh-hhcchhHHHH
Q 009247 179 MRFFKLVQG----HLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (539)
Q Consensus 179 ~kfl~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~-~~s~~~~l~~ 253 (539)
.+++..+.. .....+.. ......+.+.++.+||++++.++.++.++...+ ...+..++ . ++++...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~~ 189 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWA---HPLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVLM 189 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGG---STTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCC---CcchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHHH
Confidence 222221111 11000100 001123457899999999888888887654322 11122221 2 3455443332
Q ss_pred HHHHHHhhccc----cCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009247 254 LALYNSSIGRF----QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (539)
Q Consensus 254 ~~~~~~s~g~~----g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~ 329 (539)
+...+.+ ....+...+++||++.|+++|++. .|++|++|++|++|..+ +++.+.|++ +|++++||+
T Consensus 190 ----~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 190 ----AASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp ----HHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred ----hccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 2221111 000011468999999999998764 48899999999999876 555245765 788999999
Q ss_pred EEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCC
Q 009247 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (539)
||++ |...+.++. +++++|..+....+...++.+.+..+.+++++
T Consensus 260 VI~a~p~~~~~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 260 VILAVPPNLYSRIS--YDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp EEECSCGGGGGGSE--EESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred EEEcCCHHHHhcCE--eCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9974 444434432 34455554433222333556777777788875
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.89 E-value=2.9e-22 Score=215.35 Aligned_cols=243 Identities=17% Similarity=0.150 Sum_probs=143.4
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
++||||||||++||+||++|++ .|++|+|||+++++||+++|+..
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~---------------------------------- 55 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVT---------------------------------- 55 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEEC----------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEe----------------------------------
Confidence 5899999999999999999998 59999999999999999998431
Q ss_pred cccCCCceEEecCCCeEEecCh-HHHHHHHhcCccccccceeccce-eeEccCCceeecCCCHHHhhhccCCChHHHHHH
Q 009247 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDAT-FMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~-~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l 178 (539)
..+|.+|. ||++++... .+.+++.+.+.. ..+|....+. +++. +|+++++|... .+. .+....+...
T Consensus 56 ----~~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~-~~~~~~~~~~~~i~~-~g~~~~~p~~~-~~~---~~~~~~~~~~ 124 (513)
T 4gde_A 56 ----PEGFLYDV-GGHVIFSHYKYFDDCLDEALPK-EDDWYTHQRISYVRC-QGQWVPYPFQN-NIS---MLPKEEQVKC 124 (513)
T ss_dssp ----TTSCEEES-SCCCCCCCBHHHHHHHHHHSCS-GGGEEEEECCEEEEE-TTEEEESSGGG-GGG---GSCHHHHHHH
T ss_pred ----cCCEEEEe-CceEecCCCHHHHHHHHHhCCc-cceeEEecCceEEEE-CCeEeecchhh-hhh---hcchhhHHHH
Confidence 12456777 688887665 455666665432 2344443332 3443 78888887531 111 2222332222
Q ss_pred -HHHHHHHhcccccCccccccccccccccCCcHHHHHHh-cCCChhHHHHHH--HHHhcccCCchhhhhhhcchhHHH--
Q 009247 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTK-MKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGIN-- 252 (539)
Q Consensus 179 -~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~-~~l~~~l~~~~~--~~i~l~~~~~~~~~~~~s~~~~l~-- 252 (539)
..++....... .......++.+|+.+ ++ +.+.+.+. +.-.+...+. .++++.+...
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~~g--~~l~~~~~~~~~~~~~~~~~----~~ls~~~~~~~~ 186 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRMMG--TGIADLFMRPYNFKVWAVPT----TKMQCAWLGERV 186 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHHHH--HHHHHHTHHHHHHHHHSSCG----GGBCSGGGCSSC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHhhh--hhhhhhhcchhhhhhccCCh----HHhhHHHHHHhh
Confidence 22222211110 012234678888764 32 22222111 1111111111 1122221111
Q ss_pred -------HHHHHHHhh--ccccCCCcceEee-cCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCC
Q 009247 253 -------RLALYNSSI--GRFQNALGALIYP-IYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG 322 (539)
Q Consensus 253 -------~~~~~~~s~--g~~g~~~~~~~~p-~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G 322 (539)
.+...+... ..++.. ..+.+| +||++.|+++|++.+...|+++++|++|++|..+ ++ .|++.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G 260 (513)
T 4gde_A 187 AAPNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDG 260 (513)
T ss_dssp CCCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTS
T ss_pred cccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCC
Confidence 111111110 111111 224454 8999999999999999999999999999999765 44 3557899
Q ss_pred cEEEcCEEEEC
Q 009247 323 QDILSHKLVLD 333 (539)
Q Consensus 323 ~~i~a~~VI~~ 333 (539)
+++.||+||++
T Consensus 261 ~~~~ad~vI~t 271 (513)
T 4gde_A 261 TTIGYKKLVST 271 (513)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEECCEEEEC
Confidence 99999999975
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.89 E-value=2.4e-21 Score=207.54 Aligned_cols=295 Identities=15% Similarity=0.117 Sum_probs=174.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||..|+++|++|+|||+++++||+++|++.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~----------------------------------- 84 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID----------------------------------- 84 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC-----------------------------------
Confidence 899999999999999999999999999999999999999997643
Q ss_pred cCCCceEEecCCCeEEec-ChHHHHHHHhcCcccccccee----ccceeeEccC--CceeecCCCHHHhhhccCCChHHH
Q 009247 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (539)
Q Consensus 103 ~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~----~~~~~~~~~~--g~~~~vp~s~~~~f~~~~ls~~~k 175 (539)
++.+|+ |++++.. ...+.+++.+.|+...+.... ....+++. + |+...+|.. +... .-.
T Consensus 85 ----g~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 85 ----GYPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp ----TEEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred ----CeeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 244666 5776643 346777888888754443321 12233333 3 455555431 1110 001
Q ss_pred HHHHHHHH----HHhcccccCccccccccccccccCCcHHHHHHhcC--CChhHHHHHHHHHhcccCCchhhhhhhcchh
Q 009247 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (539)
Q Consensus 176 ~~l~kfl~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~--l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~ 249 (539)
..+.+|++ ..+..... +...........+.+.++.+||++++ +++.++.++...+... +..+. ..+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLPF-PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCSC-TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCCC-CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11223322 11111000 00000000112345789999999877 8887776654322111 11111 2245544
Q ss_pred HHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 009247 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (539)
Q Consensus 250 ~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~ 328 (539)
.+..+......+..+... ...+++++|+++|+++|.+.+...| ++|+++++|++|..+ +++ +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMDC-LMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHHH-HHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHhh-hceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 433222110000000000 1145789999999999999998888 999999999999875 444 46888889899999
Q ss_pred EEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCC
Q 009247 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (539)
+||+. |...+.++ .+.|++|..+....+...+..+.+..+.+++++
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99964 43333443 234555554333223334556778877788865
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.86 E-value=3.1e-20 Score=198.17 Aligned_cols=397 Identities=12% Similarity=0.071 Sum_probs=221.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCccccc-chhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
..+||+|||||++||++|..|+++| ++|+|+|+++++||+++++ ..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 56 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN------------------------------- 56 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT-------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC-------------------------------
Confidence 4689999999999999999999999 8999999999999999984 322
Q ss_pred cccccCCCceEEecCCCeEEecCh-HHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHH
Q 009247 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (539)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~ 177 (539)
+|.+|. |++.++... .+.+++.+.. .++..... ..+++. +|+++.+|... .+ ..++...+..
T Consensus 57 --------g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~~-~g~~~~~P~~~--~~--~~l~~~~~~~ 119 (484)
T 4dsg_A 57 --------GFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVWV-RGRWVPYPFQN--NI--HRLPEQDRKR 119 (484)
T ss_dssp --------SCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEEE-TTEEEESSGGG--CG--GGSCHHHHHH
T ss_pred --------CcEEee-CCcccccChHHHHHHHHHHh-hhhhhccC--ceEEEE-CCEEEEeCccc--hh--hhCCHHHHHH
Confidence 244565 466665544 3445555433 33332222 224443 78898888421 11 2234333322
Q ss_pred -HHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHH----HHHHHHHhcccCCchhhhhhhcchhHH-
Q 009247 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIK----SIVLYAIAMADYDQEVSEYVLKTRDGI- 251 (539)
Q Consensus 178 -l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~----~~~~~~i~l~~~~~~~~~~~~s~~~~l- 251 (539)
+..++..-... ....+.++.+|+.+. +...+. ..+...+.. .+. .++++.+.+
T Consensus 120 ~~~~ll~~~~~~--------------~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~--~~~----~~ls~~~~~~ 178 (484)
T 4dsg_A 120 CLDELVRSHART--------------YTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWA--VPP----CLMSTEWVEE 178 (484)
T ss_dssp HHHHHHHHHHCC--------------CSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHS--SCG----GGBCSSSCTT
T ss_pred HHHHHHHHHhcc--------------CCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcC--CCH----HHhcHHHHhc
Confidence 33333321110 123457899998753 111111 111111211 111 123332211
Q ss_pred -------HHH-HHHHHhhcc--ccCCCcceEeec-CCcchHHHHHHHHHHHcCcEEEeC--CceeEEEEecCCCcEEEEE
Q 009247 252 -------NRL-ALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVR 318 (539)
Q Consensus 252 -------~~~-~~~~~s~g~--~g~~~~~~~~p~-gG~geL~qal~r~~a~~Gg~~~L~--~~V~~I~~~~~~g~~~gV~ 318 (539)
..+ ...+..... ++ ..+.|.||. ||++.|+++|++.+.. ..|+++ ++|++|..+ ++ +|+
T Consensus 179 r~~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~ 250 (484)
T 4dsg_A 179 RVAPVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TIT 250 (484)
T ss_dssp TSCCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEE
T ss_pred cccCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEE
Confidence 111 111111110 11 123478886 7999999998875432 279999 569999765 44 355
Q ss_pred eCCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCC-CCceEEEeCCCCCCCCC
Q 009247 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPEQ 396 (539)
Q Consensus 319 l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~-~~~~~~~~p~~~~~~~~ 396 (539)
+.+|+++.||+||++ |...+.+++.+..++++...........+..+....+.++.+.... .....+.+|....
T Consensus 251 ~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~---- 326 (484)
T 4dsg_A 251 FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTS---- 326 (484)
T ss_dssp ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTC----
T ss_pred ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCC----
Confidence 689999999999975 3332233321101112222221112223445555555677764321 2345667775432
Q ss_pred CCcEEEEEeCCC-CccCCCCcEEEEEEEeecC--ccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCc-----e
Q 009247 397 VTSIRVLQLGGN-LAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKP-----T 468 (539)
Q Consensus 397 ~~~v~v~~~~~~-~~~cP~G~~vi~~st~~~~--~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 468 (539)
+...+..+++- +..+|+|+.++++...... ..+.+++++.+++.|....... ...+ .
T Consensus 327 -~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~--------------~~~~~~~~~v 391 (484)
T 4dsg_A 327 -PFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLL--------------PEDLLVSKWH 391 (484)
T ss_dssp -SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCC--------------TTCCEEEEEE
T ss_pred -eEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCC--------------ccceEEEEEE
Confidence 23355555543 5789999888876654321 1245788888888888753211 0011 2
Q ss_pred EEEEEeeEeecCC------------CCCCcEEEcCCCCC---C-CChHHHHHHHHHHHHHhC
Q 009247 469 LLWSALYIQDLSL------------GQFGSIISTPTPDG---N-LNYNDLLDATEKLYRKLY 514 (539)
Q Consensus 469 ~l~~~~~~~~~~~------------~~~~~i~~~~~~~~---~-~~~~~~~~~~~~~~~~i~ 514 (539)
..|.-+|-|.... ... +|++++-... . .+-|++|.+|.++++.|.
T Consensus 392 ~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 392 YRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 2466666554321 112 8999876332 1 356789999999999998
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.77 E-value=1.3e-18 Score=187.29 Aligned_cols=278 Identities=15% Similarity=0.155 Sum_probs=152.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
+..+||||||||++||+||..|+++| ++|+|||+++++||+++|+...
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 45689999999999999999999999 9999999999999999986531
Q ss_pred cccccCCCceEEecCCCeEEecC--hHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCCh-HHH
Q 009247 99 RLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL-MEK 175 (539)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~ll~~~--~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~-~~k 175 (539)
.++.+|+ |++++... .++.+++.+.++... ...+.+. +++...++.....+........ .-.
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDG------RTRFVFD-DDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHC------CCCEECC-CCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCc------ceeEEEC-CCCEEEEcCCCccccccHHHHHHHHH
Confidence 1245677 57877532 355555555443111 0011111 2332222221111100000000 001
Q ss_pred HHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhc------CCChhHHHHHHHHHh---c-ccCCchhhhhhh
Q 009247 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIA---M-ADYDQEVSEYVL 245 (539)
Q Consensus 176 ~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~l~~~l~~~~~~~i~---l-~~~~~~~~~~~~ 245 (539)
..+.++....... .....+.++.+|++++ .+++....++...+. . ..... ..+
T Consensus 120 ~~~~~~~~~~~~~-------------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~----~~~ 182 (516)
T 1rsg_A 120 NEMSKFAELEFHQ-------------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW----KLL 182 (516)
T ss_dssp HHHHHHHHHHC--------------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT----TTS
T ss_pred HHHHHHHHHHhhh-------------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh----HHC
Confidence 1222232211100 0112457888877642 233222222111110 0 00011 112
Q ss_pred cchhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEE
Q 009247 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI 325 (539)
Q Consensus 246 s~~~~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i 325 (539)
+... + +.... +...++++ ++.|+++|++.+. +++|++|++|++|..+ ++..+.|++.+|+++
T Consensus 183 s~~~-------~---~~~~~---~~~~~~~g-~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~ 244 (516)
T 1rsg_A 183 SAKD-------T---YFGHQ---GRNAFALN-YDSVVQRIAQSFP--QNWLKLSCEVKSITRE--PSKNVTVNCEDGTVY 244 (516)
T ss_dssp BHHH-------H---CCCCS---SCCEEESC-HHHHHHHHHTTSC--GGGEETTCCEEEEEEC--TTSCEEEEETTSCEE
T ss_pred ChHH-------H---Hhhcc---CcchhhhC-HHHHHHHHHHhCC--CCEEEECCEEEEEEEc--CCCeEEEEECCCcEE
Confidence 2211 0 11111 11356777 8888887765432 3679999999999875 333367888999999
Q ss_pred EcCEEEEC-CCCCCCCC---------CccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCC
Q 009247 326 LSHKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 326 ~a~~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~ 378 (539)
+||+||++ |...+... .+.+.|++|..+....+...++.+.+.++.+++++=+
T Consensus 245 ~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 245 NADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp EEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred ECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 99999975 33222110 1245667777666555555678889999999998743
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.74 E-value=8.1e-17 Score=171.29 Aligned_cols=409 Identities=11% Similarity=0.065 Sum_probs=205.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
..+||+|||+|++||++|..|+++|+ +|+|+|+++++||++++....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~------------------------------- 51 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG------------------------------- 51 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC-------------------------------
Confidence 45899999999999999999999999 8999999999999999865432
Q ss_pred ccccCCCceEEecCCCeEEec-----ChHHHHHHHh-cCcccccc-ceeccceeeEccCCceeecCCCHHHhhhccCCCh
Q 009247 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYLE-FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~-----~~~l~~~l~~-~~~~~y~e-f~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~ 172 (539)
+.+|+ |++++.. ...+.+++.+ .++..+.. |... ..+++..+|+.+..+.. ...+. .
T Consensus 52 --------~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~-----~ 115 (472)
T 1b37_A 52 --------INVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE-----L 115 (472)
T ss_dssp --------EEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH-----H
T ss_pred --------cEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH-----H
Confidence 34555 5676642 2356777777 67654321 2111 11233335554332110 00110 0
Q ss_pred HHHHHHHHHHHHHhcccccCccccccccccccccCCcHHH--HHHhcC---CChhHHHHHHHHH-hc-ccCCchhhhhhh
Q 009247 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAI-AM-ADYDQEVSEYVL 245 (539)
Q Consensus 173 ~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~l~~~~---l~~~l~~~~~~~i-~l-~~~~~~~~~~~~ 245 (539)
...+.+|.+.+.... .. ..+.+.++.+ ++.+.. ....+..++.... .+ ...+. ..+
T Consensus 116 --~~~~~~~~~~~~~~~---~~--------~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 178 (472)
T 1b37_A 116 --ADSVEEMGEKLSATL---HA--------SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPP----RVT 178 (472)
T ss_dssp --HHHHHHHHHHHHHTS---CT--------TCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCG----GGB
T ss_pred --HHHHHHHHHHHHHhh---cc--------ccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccc----ccc
Confidence 011222222221111 00 1223445443 454322 1111222221111 00 01111 111
Q ss_pred cchhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHc--------CcEEEeCCceeEEEEecCCCcEEEE
Q 009247 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGV 317 (539)
Q Consensus 246 s~~~~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~--------Gg~~~L~~~V~~I~~~~~~g~~~gV 317 (539)
+....+. ...| ..++.. ..+.++++|++.|+++|++.+... |++|+++++|++|..+ ++++ .|
T Consensus 179 s~~~~~~-~~~~----~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v 249 (472)
T 1b37_A 179 SLQNTVP-LATF----SDFGDD-VYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TV 249 (472)
T ss_dssp BSTTTSS-CHHH----HHHCSE-EEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EE
T ss_pred chhhccc-cccc----cccCCc-eeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EE
Confidence 2111100 0011 112211 113345899999999998766543 7899999999999876 4554 48
Q ss_pred EeCCCcEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCC-CCceEEEeCCCCCCCC
Q 009247 318 RLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPE 395 (539)
Q Consensus 318 ~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~-~~~~~~~~p~~~~~~~ 395 (539)
++.+|++++||+||++ |...+..++..+.+++|+.+....+...++.+.+..+.+++++-+. .....++..+...+
T Consensus 250 ~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~-- 327 (472)
T 1b37_A 250 KTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRG-- 327 (472)
T ss_dssp EETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTT--
T ss_pred EECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCc--
Confidence 8889999999999974 4333333333345666654433222233556778888888886433 22223333332111
Q ss_pred CCCcEEEEEeCCCCccCCCCcEEEEEEEeecC-----ccchHHHHHHHHHHHHhhh-hcCCCCCCCCccccccccc--Cc
Q 009247 396 QVTSIRVLQLGGNLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKLL-VTGTAGNSSTAQSEDMEEA--KP 467 (539)
Q Consensus 396 ~~~~v~v~~~~~~~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~--~~ 467 (539)
...++. . .+. ..| |..++.+...... ....++..+.+++.|.... .....+..... . ..+ .|
T Consensus 328 -~~~~~~-~--~~~-~~p-~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~--~--~~W~~~~ 397 (472)
T 1b37_A 328 -YYGVWQ-E--FEK-QYP-DANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDIL--V--PRWWSDR 397 (472)
T ss_dssp -SSCEEE-E--CTT-TST-TCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEE--C--CCTTTCT
T ss_pred -cceeee-c--ccC-CCC-CCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEE--e--cccCCCC
Confidence 123332 1 111 235 4455555443221 1134556666666666553 21111110000 0 000 00
Q ss_pred --eEEEEEeeE--ee-----cCCCCCCcEEEcCCCCCC--C-ChHHHHHHHHHHHHHhCC
Q 009247 468 --TLLWSALYI--QD-----LSLGQFGSIISTPTPDGN--L-NYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 468 --~~l~~~~~~--~~-----~~~~~~~~i~~~~~~~~~--~-~~~~~~~~~~~~~~~i~~ 515 (539)
.--|+. +. +. ......+++++++.-... - ..++|+.+++++.++|..
T Consensus 398 ~~~G~~~~-~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~ 456 (472)
T 1b37_A 398 FYKGTFSN-WPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILIN 456 (472)
T ss_dssp TTSSSEEE-CBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCC-CCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 001221 10 00 001233789999886543 2 567899999999888864
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.73 E-value=1.5e-16 Score=167.05 Aligned_cols=283 Identities=14% Similarity=0.102 Sum_probs=155.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||..|+++|++|+|||+++++||++.+.+....
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~ci--------------------------------- 48 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNV--------------------------------- 48 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSS---------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCC---------------------------------
Confidence 79999999999999999999999999999999999999988654310
Q ss_pred cCCCceEEecCCCeEEec--ChHHHHHHHhcCccccccceeccceeeE-ccCCceeec-CCCHHHhhhccCCChHHHHHH
Q 009247 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 103 ~~~~~~~~dl~Gp~ll~~--~~~l~~~l~~~~~~~y~ef~~~~~~~~~-~~~g~~~~v-p~s~~~~f~~~~ls~~~k~~l 178 (539)
..+.+++ |++++.. ...+.+++.+.|+....... .....+ ..++++... |... .... .-+..+
T Consensus 49 ---pg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 115 (431)
T 3k7m_X 49 ---PGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASE--FTSFRHRLGPTAVDQAFPIPG-SEAV------AVEAAT 115 (431)
T ss_dssp ---TTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCC--CCEECCBSCTTCCSSSSCCCG-GGHH------HHHHHH
T ss_pred ---CCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCC--CCcEEEEecCCeecCCCCCCH-HHHH------HHHHHH
Confidence 1233444 3555433 33556666666654321111 111111 112222111 1111 1100 112223
Q ss_pred HHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHh-cccCCchhhhhhhcchhHHHHHHHH
Q 009247 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIA-MADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~-l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (539)
.+++..........+.. ....... +.++.+|+++.+.++..+.++...+. ...... .+++....+. +
T Consensus 116 ~~l~~~~~~~~~~~~~~---~~~~~~~-d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~----~ 183 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLE---NQDLEDL-DIPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPA----DQASALWMLQ----L 183 (431)
T ss_dssp HHHHHHHTTCCTTTCTT---SSSCGGG-CSBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCT----TTSBHHHHHH----H
T ss_pred HHHHHHHHhcCCCCCcc---Ccchhhh-cCCHHHHHHhcCCCHHHHHHHHHHHHHhcCCCh----hhhhHHHHHH----H
Confidence 34444333321111100 0011223 38999999988888877665422111 111111 1234443332 2
Q ss_pred HHhhc------cccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 009247 258 NSSIG------RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (539)
Q Consensus 258 ~~s~g------~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI 331 (539)
+...+ ..+. .. ++.+|++.+.+++. +..| +|++|++|++|..+ ++++ .|++.+|++++||+||
T Consensus 184 ~~~~~~~~~~~~~~~---~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~vi 252 (431)
T 3k7m_X 184 VAAHHYSILGVVLSL---DE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDVV-NVTVKDGHAFQAHSVI 252 (431)
T ss_dssp HHHTTSCHHHHHHTC---CE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSSE-EEEETTSCCEEEEEEE
T ss_pred HHhcCCccceeecch---hh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCeE-EEEECCCCEEEeCEEE
Confidence 22111 0111 13 67899999888664 4556 99999999999875 4444 5888889889999999
Q ss_pred EC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCC
Q 009247 332 LD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 332 ~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (539)
+. |...+..+ .+.|+++..+.........+...+...-++.++
T Consensus 253 ~a~~~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 253 VATPMNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp ECSCGGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred EecCcchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 74 33332332 234555553333222233455677777778776
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.71 E-value=1.7e-16 Score=166.24 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=137.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
..+||||||||++||+||.+|+++| ++|+|+|+++++||+++|++.+|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4589999999999999999999999 99999999999999999976533
Q ss_pred ccccCCCceEEecCCCeEEecC-hHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHH
Q 009247 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l 178 (539)
+.+|+ |++++... ..+.+++.+.|+... .......+.+ .+|+.. .|.. +.... +.....+
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~~~~~----~~~~~~~ 114 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--DPVRG----PQVMAAV 114 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--CTTHH----HHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--Ccccc----hhHHHHH
Confidence 23444 45554333 356677777775421 1122222332 355543 2211 00000 0011122
Q ss_pred HHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCchhhhhhhcchhHHHHHHHHH
Q 009247 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (539)
.++...+.......... .......+....++.+|+++.+.+. +.+.+...+....+. ++ ..+++...+..+...
T Consensus 115 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~~~~~~~- 188 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDAN-GHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVLKYLDFV- 188 (424)
T ss_dssp HHHHHHHHTTTTTTTSS-SSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHHHHSCHH-
T ss_pred HHHHHHHhhhhhhcccc-cchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHHHhhhHh-
Confidence 23332222211100000 0000112344689999999877764 444322111111121 11 223443332211110
Q ss_pred HhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 259 ~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..+...+ +..+++.+|++++++++.+ ..+..+++|++|++|..+ ++++ .|++.+|+ ++||+||++
T Consensus 189 ~~~~~~~---~~~~~~~~g~~~l~~~l~~---~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a 253 (424)
T 2b9w_A 189 TMMSFAK---GDLWTWADGTQAMFEHLNA---TLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLT 253 (424)
T ss_dssp HHHHHHH---TCCBCCTTCHHHHHHHHHH---HSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEEC
T ss_pred hhhcccC---CceEEeCChHHHHHHHHHH---hhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEEC
Confidence 0011011 1134778999999997754 457789999999999876 5555 48877775 899999974
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.70 E-value=4.5e-16 Score=166.59 Aligned_cols=284 Identities=12% Similarity=0.081 Sum_probs=154.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||..|++.|++|+|||+++++||++.++...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~--------------------------------- 78 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNE--------------------------------- 78 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEET---------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccC---------------------------------
Confidence 35899999999999999999999999999999999999999886521
Q ss_pred cccCCCceEEecCCCeEEecCh-HHHHHHHhcCccccccceecc-ceeeEccCCceeecCC---CHHHhhhccCCChHHH
Q 009247 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGLMEK 175 (539)
Q Consensus 101 ~~~~~~~~~~dl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~-~~~~~~~~g~~~~vp~---s~~~~f~~~~ls~~~k 175 (539)
...+.+|+ |++++.... .+.+++.+.|+... .|...+ ..+++. +|.....+. .. ..+.. .+.+.++
T Consensus 79 ----~~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~-~~~~~~~ 149 (498)
T 2iid_A 79 ----EAGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLKY-PVKPSEA 149 (498)
T ss_dssp ----TTTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGCC-CCCGGGT
T ss_pred ----CCCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-ccccc-CCCcccc
Confidence 01234455 466554433 45566667776421 221111 112111 333221110 00 00100 0111110
Q ss_pred ---------HHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHHHhcccCCchhhhhhh
Q 009247 176 ---------NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMADYDQEVSEYVL 245 (539)
Q Consensus 176 ---------~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~-l~~~l~~~~~~~i~l~~~~~~~~~~~~ 245 (539)
..+.+++..+... . .......+.+.++.+|+++.+ +++..+..+...+... ... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 215 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRT----N----CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNED--SGY----YV 215 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHS----C----HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCG--GGT----TS
T ss_pred CCCHHHHHHHHHHHHHHHHhhc----c----HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcc--cch----hH
Confidence 0111222211111 0 000112345678999999865 5665555432211100 000 00
Q ss_pred cchhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc--
Q 009247 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-- 323 (539)
Q Consensus 246 s~~~~l~~~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-- 323 (539)
+...++... ..+. .+ ..+.++++|++.|+++|++.+ +..|++|++|++|..+ +++ +.|++.+|+
T Consensus 216 ~~~~~~~~~----~~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~~ 281 (498)
T 2iid_A 216 SFIESLKHD----DIFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSKE 281 (498)
T ss_dssp BHHHHHHHH----HHHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSSC
T ss_pred HHHHHHHHH----hccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCcc
Confidence 111111111 1111 12 126789999999999987654 3489999999999876 444 357666665
Q ss_pred --EEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCC
Q 009247 324 --DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 324 --~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (539)
+++||+||++ |...+..+ .+.|++|..+....+...++.+.+..+.+++++
T Consensus 282 ~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 282 TPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred cceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 4899999975 43332332 234556655443323334666788888888875
No 23
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.70 E-value=2.1e-15 Score=155.57 Aligned_cols=348 Identities=12% Similarity=0.149 Sum_probs=186.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccc-hhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (539)
....+||+|||||++||++|..|+++|++|+|+|+++++||++.+.. ..|
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 34579999999999999999999999999999999999999998854 222
Q ss_pred ccccccCCCceEE-ecCCCeEEecC-hHHHHHHHhcCccccccceec-cceeeEccCCceeecCCCHHHh--hhccCCCh
Q 009247 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSI-DATFMLDADAKLCSVPDSRAAI--FKDKSLGL 172 (539)
Q Consensus 98 ~~~~~~~~~~~~~-dl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~-~~~~~~~~~g~~~~vp~s~~~~--f~~~~ls~ 172 (539)
+.+ +. |+++++.. ..+.+++.+.+. |... ...+++. +|+++++|.+...+ +....+++
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~ 139 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTE-----WRPYQHRVLASV-DGQLLPIPINLDTVNRLYGLNLTS 139 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCC-----EEECCCBEEEEE-TTEEEEESCCHHHHHHHHTCCCCH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhh-----cccccccceEEE-CCEEEEcCCChHHHHHhhccCCCH
Confidence 121 33 56666544 356666766652 2221 2234443 89999999875332 11222333
Q ss_pred HHHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHh-cCCChhHHHHHH--HHHhcccCCchhhhhhhcchh
Q 009247 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTK-MKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRD 249 (539)
Q Consensus 173 ~~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~-~~l~~~l~~~~~--~~i~l~~~~~~~~~~~~s~~~ 249 (539)
.. +..++.. ... ....+.++.+|+.+ ++ +.+.+.++ +.-... ..++ .++|+..
T Consensus 140 ~~---~~~~l~~-~~~--------------~~~~~~s~~e~~~~~~G--~~~~e~~~~py~~k~~--~~~~--~~Lsa~~ 195 (397)
T 3hdq_A 140 FQ---VEEFFAS-VAE--------------KVEQVRTSEDVVVSKVG--RDLYNKFFRGYTRKQW--GLDP--SELDASV 195 (397)
T ss_dssp HH---HHHHHHH-HCC--------------CCSSCCBHHHHHHHHHH--HHHHHHHTHHHHHHHH--SSCG--GGSBTTT
T ss_pred HH---HHHHHhh-ccc--------------CCCCCcCHHHHHHHhcC--HHHHHHHHHHHhCchh--CCCH--HHHHHHH
Confidence 32 2333331 111 12346799999975 44 23333222 222222 2222 3455542
Q ss_pred HHHHHHHHHHhhccccCCCcce-EeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 009247 250 GINRLALYNSSIGRFQNALGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (539)
Q Consensus 250 ~l~~~~~~~~s~g~~g~~~~~~-~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~ 328 (539)
+.++......-.+|.+ +.| .+|++|.+.|.++|. +..|++|+||++|.++ +.++.+|
T Consensus 196 -~~Rvp~~~~~d~~yf~--~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d 253 (397)
T 3hdq_A 196 -TARVPTRTNRDNRYFA--DTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQ 253 (397)
T ss_dssp -GGGSCCCSSCCCBSCC--CSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEE
T ss_pred -HHhcCcccccCccchh--hhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCC
Confidence 1121100000001111 224 379999999988764 4569999999999832 2234588
Q ss_pred EEEECCCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCCcEEEEEeCCC
Q 009247 329 KLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (539)
Q Consensus 329 ~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~ 408 (539)
+||++... ..+. +.. + .......+......++.+-.+ ....+.+|... + --++.++..-
T Consensus 254 ~vI~T~P~--d~~~---~~~-------~-g~L~yrsl~~~~~~~~~~~~~--~~~~vn~~d~~-p-----~tRi~e~k~~ 312 (397)
T 3hdq_A 254 HMIYTGPV--DAFF---DFC-------Y-GKLPYRSLEFRHETHDTEQLL--PTGTVNYPNDY-A-----YTRVSEFKHI 312 (397)
T ss_dssp EEEECSCH--HHHT---TTT-------T-CCCCEEEEEEEEEEESSSCSC--SSSEEECSSSS-S-----CSEEEEHHHH
T ss_pred EEEEcCCH--HHHH---HHh-------c-CCCCCceEEEEEEEeccccCC--CCeEEEeCCCC-c-----ceEEEeeccc
Confidence 99964221 1110 000 0 011122222222335544222 35688888432 2 2356766654
Q ss_pred CccCCCCcEEEEEEEeecCc--------cchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCceEEEEEeeEeecC
Q 009247 409 LAVCPLGMFVLYFSALCDEV--------NQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPTLLWSALYIQDLS 480 (539)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~~--------~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 480 (539)
++. |.++.+|..-..+... .+..+++++..+.... .+.| +|.-..
T Consensus 313 ~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a~~---------------------~~~v----~~~GRl- 365 (397)
T 3hdq_A 313 TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALADA---------------------AQDV----TFVGRL- 365 (397)
T ss_dssp HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHHHH---------------------CTTE----EECSTT-
T ss_pred CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHHhc---------------------CCCE----EEcccc-
Confidence 433 4567777655444321 2344555555544322 1111 121111
Q ss_pred CCCCCcEEEcCCCCCCCChHHHHHHHHHHHHHhCCCC
Q 009247 481 LGQFGSIISTPTPDGNLNYNDLLDATEKLYRKLYPNE 517 (539)
Q Consensus 481 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 517 (539)
+ + ---.+-|.+|.+|.++++++..++
T Consensus 366 -g---------~-y~Y~~md~~i~~al~~~~~~~~~~ 391 (397)
T 3hdq_A 366 -A---------T-YRYYNMDQVVAQALATFRRLQGQP 391 (397)
T ss_dssp -T---------T-TCCCCHHHHHHHHHHHHHHHHC--
T ss_pred -e---------E-EEeccHHHHHHHHHHHHHHHhcch
Confidence 0 1 125788899999999999998654
No 24
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.68 E-value=3.1e-16 Score=167.48 Aligned_cols=300 Identities=14% Similarity=0.087 Sum_probs=151.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+..+||||||||++||+||..|+++|++|+|||+++++||++++....+. +....+.. .
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~--~~~~~~~~---------~---------- 67 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSE--ETDLSGET---------Q---------- 67 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCE--EECTTSCE---------E----------
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcc--cccccchh---------h----------
Confidence 34689999999999999999999999999999999999999988764321 11111000 0
Q ss_pred ccccCCCceEEecCCCeEEecChHHHHHHHhcCccccccceecc-ceeeE-ccC----CceeecCCCHHHhhhccCCChH
Q 009247 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID-ATFML-DAD----AKLCSVPDSRAAIFKDKSLGLM 173 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~~~~l~~~l~~~~~~~y~ef~~~~-~~~~~-~~~----g~~~~vp~s~~~~f~~~~ls~~ 173 (539)
.......+.++. |+..++....+.+++.+.|+... .+.... ..+++ ..+ |+...+|....+.+
T Consensus 68 -~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 136 (489)
T 2jae_A 68 -KCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTF-------- 136 (489)
T ss_dssp -ECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHH--------
T ss_pred -hhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhhh--------
Confidence 001123445666 57766555577888888887421 121111 12333 312 44443322111100
Q ss_pred HHHHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChh--------HHHHHHH--HHhcccCCchhhhh
Q 009247 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLY--AIAMADYDQEVSEY 243 (539)
Q Consensus 174 ~k~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~--------l~~~~~~--~i~l~~~~~~~~~~ 243 (539)
..+..++........ ... ......+.++.+|+++++.... +..++.. .+.+. .... +
T Consensus 137 --~~~~~l~~~~~~~~~-~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 203 (489)
T 2jae_A 137 --GYMSELLKKATDQGA-LDQ------VLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNF--GTEK--K 203 (489)
T ss_dssp --HHHHHHHHHHHHHTT-TTT------TSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCC--CEEC--C
T ss_pred --ccHHHHHHHHHhccc-ccc------ccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCccccc--CCCC--C
Confidence 011112211111000 000 0001123467777775421100 0000000 00000 0000 0
Q ss_pred hhcchhHHHH--HHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCcEEEEEeC
Q 009247 244 VLKTRDGINR--LALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLA 320 (539)
Q Consensus 244 ~~s~~~~l~~--~~~~~~s~g~~g~~~~~~~~p~gG~geL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l~ 320 (539)
......+.. +..++........ ...+.++++|++.|+++|++.+ + ++|++|++|++|..+ ++++ .|++.
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~v-~v~~~ 275 (489)
T 2jae_A 204 -PFAMQEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEGV-TVEYT 275 (489)
T ss_dssp -CCCHHHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTEE-EEEEE
T ss_pred -CcCHHHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCeE-EEEEe
Confidence 000000000 0011111001111 1236789999999999987654 4 789999999999886 5554 47666
Q ss_pred CC---cEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCC
Q 009247 321 SG---QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 321 ~G---~~i~a~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (539)
+| ++++||+||++ |...+..+.. ++|..+....+...+..+.+..+.+++++
T Consensus 276 ~g~~~~~~~ad~vI~a~p~~~l~~l~~----~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 276 AGGSKKSITADYAICTIPPHLVGRLQN----NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp ETTEEEEEEESEEEECSCHHHHTTSEE----CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred cCCeEEEEECCEEEECCCHHHHHhCcc----CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 66 67999999975 4333344421 23332222212223566778888888875
No 25
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.60 E-value=1.7e-13 Score=153.07 Aligned_cols=225 Identities=12% Similarity=0.093 Sum_probs=121.0
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCccchhhh
Q 009247 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (539)
Q Consensus 271 ~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l 349 (539)
..+..+|++.|.+++++ |..|+++++|++|..+ +++ +.|++.+|++++||+||+. |...+....+.+.|++
T Consensus 526 ~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred eEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 45678899999987754 6789999999999876 444 4588889999999999974 4333222223356667
Q ss_pred hhhhhhhccCCCCceEEEEEEEecCCCCCC---CCceEEEeCCCCCCCCCCCcEEEEEeCCCCccCCCCc-EEEEEEEee
Q 009247 350 QESFQAFSLSDNKGKVARGICITRSSLKPD---LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM-FVLYFSALC 425 (539)
Q Consensus 350 ~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~---~~~~~~~~p~~~~~~~~~~~v~v~~~~~~~~~cP~G~-~vi~~st~~ 425 (539)
|..+....+....+.+.+.++.+++++=.. .....-.+++.. ....++...++. +|.|. .++...+..
T Consensus 598 p~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~----~~~~~~~~~~d~----~p~g~~~vL~~~i~G 669 (776)
T 4gut_A 598 SEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSA----SKRGLFAVFYDM----DPQKKHSVLMSVIAG 669 (776)
T ss_dssp CHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSG----GGTTEEEEEEES----CTTSCSCEEEEEECT
T ss_pred CHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCc----CCCceEEEEecC----CCCCCceEEEEEecc
Confidence 665443333334566788888899886321 111222233321 112333333332 35553 333332222
Q ss_pred c-----CccchHHHHHHHHHHHHhhhhcCC-CCCCCCcccccccccCc--eEEEEEeeEeecCC---------CCCCcEE
Q 009247 426 D-----EVNQGKKLLHAALSALQKLLVTGT-AGNSSTAQSEDMEEAKP--TLLWSALYIQDLSL---------GQFGSII 488 (539)
Q Consensus 426 ~-----~~~~~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~---------~~~~~i~ 488 (539)
. ...+.++.++.+++.|........ .+........ =...| .--|+ |...... ...++|+
T Consensus 670 ~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~--W~~dp~s~Gsys--~~~~g~~~~~~~~L~~p~~grL~ 745 (776)
T 4gut_A 670 EAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTR--WSTDPWIQMAYS--FVKTGGSGEAYDIIAEDIQGTVF 745 (776)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECC--GGGCTTTCCSEE--EEBTTCCTHHHHHHHCCBTTTEE
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEec--CCCCCccCCCCC--ccCCCCchhHHHHHhCcCCCcEE
Confidence 1 112445667777777766543210 0100000000 00001 00122 1111111 1136788
Q ss_pred EcCCCCC---CCChHHHHHHHHHHHHHhCC
Q 009247 489 STPTPDG---NLNYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 489 ~~~~~~~---~~~~~~~~~~~~~~~~~i~~ 515 (539)
+++.-+. .-..++|+.+++++..+|..
T Consensus 746 FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 746 FAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp ECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred EEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 8887655 23467899999999998853
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.59 E-value=4.9e-16 Score=161.57 Aligned_cols=300 Identities=12% Similarity=0.088 Sum_probs=157.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
.++||||||||++||+||..|+++ |++|+|+|+++++||+++|.....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 469999999999999999999999 999999999999999999976410
Q ss_pred ccccCCCceEEecCCCeEEec-ChHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHH---hhhccCCChHHH
Q 009247 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAA---IFKDKSLGLMEK 175 (539)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~ll~~-~~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~---~f~~~~ls~~~k 175 (539)
.++.+|-.|++++.. ...+.+++.+.++. ..+. ...+++. +|+.+++|.+... ++.. .+++.+
T Consensus 55 ------~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~--~~~~--~~~~~~~-~G~~~~~p~~~~~~~~l~~~-~~~~~~- 121 (399)
T 1v0j_A 55 ------TGIEVHKYGAHLFHTSNKRVWDYVRQFTDF--TDYR--HRVFAMH-NGQAYQFPMGLGLVSQFFGK-YFTPEQ- 121 (399)
T ss_dssp ------TCCEEETTSCCCEEESCHHHHHHHTTTCCB--CCCC--CCEEEEE-TTEEEEESSSHHHHHHHHTS-CCCHHH-
T ss_pred ------CCEEEEeCCCcEEcCCcHHHHHHHHHhhhh--hccc--cceEEEE-CCEEEeCCCCHHHHHHHhcc-cCCHHH-
Confidence 123343115666644 34667777777652 1221 1223333 7888888876422 2221 112222
Q ss_pred HHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHH-HHHH-HHHhcccCCchhhhhhhcchhHHHH
Q 009247 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIK-SIVL-YAIAMADYDQEVSEYVLKTRDGINR 253 (539)
Q Consensus 176 ~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~-~~~~-~~i~l~~~~~~~~~~~~s~~~~l~~ 253 (539)
+.+++....... ....+.++.+|+.+. +.+.+. .++. +.......+. .++++... .+
T Consensus 122 --~~~~l~~~~~~~-------------~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~----~~ls~~~~-~~ 180 (399)
T 1v0j_A 122 --ARQLIAEQAAEI-------------DTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDP----KELPAANI-TR 180 (399)
T ss_dssp --HHHHHHHHGGGS-------------CTTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCG----GGSCGGGC-SC
T ss_pred --HHHHHHHHhhcc-------------CCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCCh----hhcChHhh-hc
Confidence 222222211110 012346788888762 233333 3322 2212221121 23444332 00
Q ss_pred HHHHHHhhccccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEE-EcCEEE
Q 009247 254 LALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKLV 331 (539)
Q Consensus 254 ~~~~~~s~g~~g~~~~~~~-~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i-~a~~VI 331 (539)
+.........+.. ..+. +|+||+++|+++|++ ..|++|+||++|++|.. . | . ++ .||+||
T Consensus 181 ~~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v--~---~~~~aD~VI 242 (399)
T 1v0j_A 181 LPVRYTFDNRYFS--DTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L--R---PGSPAAPVV 242 (399)
T ss_dssp CCCCSSSCCCSCC--CSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H--T---TTSTTCCEE
T ss_pred ceeEeccccchhh--hhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h--h---hcccCCEEE
Confidence 0000000011111 1253 999999999998865 57899999999999842 1 2 1 35 689999
Q ss_pred EC-CCCCCCCCCccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCCcEEEEEeCCC-C
Q 009247 332 LD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN-L 409 (539)
Q Consensus 332 ~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~-~ 409 (539)
++ |...+.++. + ....+..+....+..+.+..+ ....+.+|..... ...+..+..- +
T Consensus 243 ~t~p~~~l~~~~-------------l-~~l~y~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~ri~~~~~~~~ 301 (399)
T 1v0j_A 243 YTGPLDRYFDYA-------------E-GRLGWRTLDFEVEVLPIGDFQ--GTAVMNYNDLDVP-----YTRIHEFRHFHP 301 (399)
T ss_dssp ECSCHHHHTTTT-------------T-CCCCEEEEEEEEEEESSSCSS--SSSEEEECCTTSS-----CSEEEEGGGGCT
T ss_pred ECCcHHHHHhhh-------------h-CCCCcceEEEEEEEEccccCC--CCeEEEeCCCCCC-----cceeEeecCCCC
Confidence 75 322112221 0 011222222333345655322 2346777743221 1234455433 4
Q ss_pred ccC-CCCcEEEEEEEe
Q 009247 410 AVC-PLGMFVLYFSAL 424 (539)
Q Consensus 410 ~~c-P~G~~vi~~st~ 424 (539)
... |+++.++++...
T Consensus 302 ~~~~~~~~~~v~~e~~ 317 (399)
T 1v0j_A 302 ERDYPTDKTVIMREYS 317 (399)
T ss_dssp TSCCCSSCEEEEEEEE
T ss_pred CCcCCCCCeEEEEeec
Confidence 555 667777777643
No 27
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.59 E-value=4e-14 Score=144.88 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=43.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC-CCCCCcccccch
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSI 66 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~-~~~GG~~~s~~~ 66 (539)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecc
Confidence 45689999999999999999999999999999999 999999998763
No 28
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.58 E-value=4.5e-13 Score=136.04 Aligned_cols=215 Identities=10% Similarity=0.041 Sum_probs=123.7
Q ss_pred EeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCccchhhhh
Q 009247 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQ 350 (539)
Q Consensus 272 ~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~-p~~~~~~l~~~~~~~l~ 350 (539)
+.+.+|+..+.+++++.. |++|+++++|++|..+ +++ +.|++.+|++++||.||+. |.....+++....+.+|
T Consensus 105 ~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 456889999999887643 8999999999999876 444 4588888888999999964 43333455433344454
Q ss_pred hhhhhhccCCCCceEEEEEEEecCCCC-CCCCceEEEeCCCCCCCCCCCcEEEEEeCCC-CccC--CCCcE-EEEEEEee
Q 009247 351 ESFQAFSLSDNKGKVARGICITRSSLK-PDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN-LAVC--PLGMF-VLYFSALC 425 (539)
Q Consensus 351 ~~~~~l~~~~~~~~v~r~i~i~~~~l~-~~~~~~~~~~p~~~~~~~~~~~v~v~~~~~~-~~~c--P~G~~-vi~~st~~ 425 (539)
+..........+..+....+.+++++. +.+ ..-+.+|.. ..+..+..++. .+.. |.|.. +++.+..-
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~-~~g~~~~~~-------~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~ 250 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGTKIDVP-WAGQYITSN-------PCIRFVSIDNKKRNIESSEIGPSLVIHTTVPF 250 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC--CCS-CSEEECSSC-------SSEEEEEEHHHHTTCCCC-CCCEEEEEECHHH
T ss_pred HHHHHHHhcCCccccEEEEEEECCCCccCCc-eeeEEccCC-------cceEEEEccccCCCCCCCCCCceEEEECCHHH
Confidence 433332233356667777777887632 222 222334421 22332322222 3332 33433 33332100
Q ss_pred ---cCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCce----EEEEEeeEeecC--C------CCCCcEEEc
Q 009247 426 ---DEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKPT----LLWSALYIQDLS--L------GQFGSIIST 490 (539)
Q Consensus 426 ---~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~--~------~~~~~i~~~ 490 (539)
.-..+.++..+.+++.|..... .. .+|. .-|..-.-|... . ...+++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~g-~~--------------~~p~~~~v~rW~~a~p~~~~~~~~~~~~~~~~~~l~la 315 (342)
T 3qj4_A 251 GVTYLEHSIEDVQELVFQQLENILP-GL--------------PQPIATKCQKWRHSQVTNAAANCPGQMTLHHKPFLACG 315 (342)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHSC-SC--------------CCCSEEEEEEETTCSBSSCCSSSCSCEEEETTTEEEEC
T ss_pred HHHhhcCCHHHHHHHHHHHHHHhcc-CC--------------CCCceeeeccccccccccccCCCcceeEecCCccEEEE
Confidence 0122456666777777766532 11 1111 123211111110 0 133789999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhCC
Q 009247 491 PTPDGNLNYNDLLDATEKLYRKLYP 515 (539)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~i~~ 515 (539)
.........++++.+++++.++|..
T Consensus 316 Gd~~~g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 316 GDGFTQSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp SGGGSCSSHHHHHHHHHHHHHHHTT
T ss_pred ccccCCCCccHHHHHHHHHHHHHHh
Confidence 9988899999999999999999865
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.57 E-value=2e-15 Score=155.13 Aligned_cols=226 Identities=13% Similarity=0.191 Sum_probs=128.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCccccccccccccccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (539)
++||+|||+|++||++|..|+++|++|+|+|+++++||++.++...+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g--------------------------------- 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG--------------------------------- 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT---------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC---------------------------------
Confidence 37999999999999999999999999999999999999999865432
Q ss_pred ccCCCceEEecCCCeEEecCh-HHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHhhhccCCChHHHHHHHH
Q 009247 102 SQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMR 180 (539)
Q Consensus 102 ~~~~~~~~~dl~Gp~ll~~~~-~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~f~~~~ls~~~k~~l~k 180 (539)
+.+|..||+++.... .+.+++.+.+. ...+... .+.+ .+|+.+.+|.+...+.. .+.......+.+
T Consensus 48 ------~~~~~~G~~~~~~~~~~~~~~~~~l~~--~~~~~~~--~~~~-~~g~~~~~p~~~~~~~~--l~~~~~~~~~~~ 114 (367)
T 1i8t_A 48 ------IQIHKYGAHIFHTNDKYIWDYVNDLVE--FNRFTNS--PLAI-YKDKLFNLPFNMNTFHQ--MWGVKDPQEAQN 114 (367)
T ss_dssp ------EEEETTSCCCEEESCHHHHHHHHTTSC--BCCCCCC--CEEE-ETTEEEESSBSHHHHHH--HHCCCCHHHHHH
T ss_pred ------ceeeccCCceecCCCHHHHHHHHHhhh--hhhcccc--ceEE-ECCeEEEcCCCHHHHHH--HhccCCHHHHHH
Confidence 334312577665443 45565655443 1122211 1223 37888888876433221 111111223344
Q ss_pred HHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcccCCchhhhhhhcchhHHHHHHHHH
Q 009247 181 FFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 181 fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~--~~i~l~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (539)
|+....... ....+.++.+|+.+. +.+.+.+.++ +..+..+.+. .++++... .++....
T Consensus 115 ~l~~~~~~~-------------~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~----~~lsa~~~-~~l~~~~ 175 (367)
T 1i8t_A 115 IINAQKKKY-------------GDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSA----KELPAFII-KRIPVRF 175 (367)
T ss_dssp HHHHHTTTT-------------CCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCG----GGSCTTSS-CCCCBCS
T ss_pred HHHHHhhcc-------------CCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCCh----HHcCHHHH-hhceeee
Confidence 444332210 112457899999864 3334333222 2222222222 23444321 0000000
Q ss_pred HhhccccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 259 SSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 259 ~s~g~~g~~~~~~~-~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..-..+. .+.+. +|+||+++|+++|++ |++|+||++|++|. . + | .+.+|+||++
T Consensus 176 ~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~-~----~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 176 TFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK-D----S---L------ASKAHRIIYT 230 (367)
T ss_dssp SSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH-H----H---H------HTTEEEEEEC
T ss_pred ccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec-h----h---h------hccCCEEEEe
Confidence 0000111 12353 999999999998865 68999999999873 1 1 2 1358999974
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.54 E-value=1.2e-14 Score=150.38 Aligned_cols=213 Identities=13% Similarity=0.167 Sum_probs=123.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccchhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
+++||+|||+|++||++|..|+++|++|+|+|+++++||++.+.....
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 458999999999999999999999999999999999999999865420
Q ss_pred cccCCCceEE-ecCCCeEEecC-hHHHHHHHhcCccccccceeccceeeEccCCceeecCCCHHHh---hhccCCChHHH
Q 009247 101 LSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAI---FKDKSLGLMEK 175 (539)
Q Consensus 101 ~~~~~~~~~~-dl~Gp~ll~~~-~~l~~~l~~~~~~~y~ef~~~~~~~~~~~~g~~~~vp~s~~~~---f~~~~ls~~~k 175 (539)
.++.+ |. |++++... ..+.+++.+.+.. ..+. ...+++. +|+.+.+|.+...+ |.. .+++.
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~--~~~~~~~-~g~~~~~P~~~~~~~~l~~~-~~~~~-- 115 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEM--MPYV--NRVKATV-NGQVFSLPINLHTINQFFSK-TCSPD-- 115 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCE--EECC--CCEEEEE-TTEEEEESCCHHHHHHHTTC-CCCHH--
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhh--cccc--cceEEEE-CCEEEECCCChhHHHHHhcc-cCCHH--
Confidence 12223 33 57766543 3666777666541 1111 1223333 78888888875322 211 12222
Q ss_pred HHHHHHHHHHhcccccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcccCCchhhhhhhcchhHHHH
Q 009247 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINR 253 (539)
Q Consensus 176 ~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~l~~~~~--~~i~l~~~~~~~~~~~~s~~~~l~~ 253 (539)
.+.+++...... ....+.++.+|+.+. +.+.+.+.++ +..+....+. .++++... .+
T Consensus 116 -~~~~~l~~~~~~--------------~~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~----~~ls~~~~-~r 174 (384)
T 2bi7_A 116 -EARALIAEKGDS--------------TIADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQP----SELPASIL-KR 174 (384)
T ss_dssp -HHHHHHHHHSCC--------------SCSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCG----GGSBGGGC-CS
T ss_pred -HHHHHHHHhhhc--------------cCCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCH----HHhCHHHH-hc
Confidence 223344322211 012467999999864 3444444332 2222222122 23444321 00
Q ss_pred HHHHHHhhccccCCCcceE-eecCCcchHHHHHHHHHHHcCcEEEeCCcee-EE
Q 009247 254 LALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SL 305 (539)
Q Consensus 254 ~~~~~~s~g~~g~~~~~~~-~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~-~I 305 (539)
+.........+.. +.+. +|+||+++|+++|++ ..|++|+||++|+ +|
T Consensus 175 ~~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i 223 (384)
T 2bi7_A 175 LPVRFNYDDNYFN--HKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEE 223 (384)
T ss_dssp CCCCSSSCCCSCC--CSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGG
T ss_pred ccccccccccccc--ccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhh
Confidence 0000000011111 2353 999999999998864 4689999999999 76
No 31
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.52 E-value=5.9e-12 Score=139.14 Aligned_cols=100 Identities=11% Similarity=-0.035 Sum_probs=70.6
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCCC-
Q 009247 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL- 342 (539)
Q Consensus 271 ~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~a~~VI~~-p~~~~~~l~- 342 (539)
+..+++|++.|+++|++ |..|+||++|++|..+ ++. +.|++.+ |++++||+||+. |...+.++.
T Consensus 393 ~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 393 HLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp CEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 56789999999998865 4589999999999887 444 3566544 568999999975 433333321
Q ss_pred -ccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCC
Q 009247 343 -ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 343 -~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~ 378 (539)
+.+.|+||..+....+...++.+.+.++.+++++-+
T Consensus 465 ~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 465 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred ceEEcCCCCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 235677777554433334577788988889998744
No 32
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.43 E-value=3.4e-12 Score=143.41 Aligned_cols=101 Identities=11% Similarity=-0.031 Sum_probs=70.2
Q ss_pred ceEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCCC
Q 009247 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (539)
Q Consensus 270 ~~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~a~~VI~~-p~~~~~~l~ 342 (539)
.++.+++|++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||+. |...+.++.
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 366889999999998865 3469999999999887 444 3466544 568999999975 433333321
Q ss_pred --ccchhhhhhhhhhhccCCCCceEEEEEEEecCCCCC
Q 009247 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 343 --~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~ 378 (539)
+.+.|+||..+....+...++.+.+.++.+++++-+
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~ 672 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 672 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred cccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccC
Confidence 235667776554433333467788888889998744
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.36 E-value=3.4e-10 Score=114.03 Aligned_cols=207 Identities=8% Similarity=-0.012 Sum_probs=111.2
Q ss_pred eecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEE-cCEEEE-CCCCCCCCCCccchhhhh
Q 009247 273 YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL-SHKLVL-DPSFTVPGSLASSHQQLQ 350 (539)
Q Consensus 273 ~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~-a~~VI~-~p~~~~~~l~~~~~~~l~ 350 (539)
....|+..|.+++.+ |.+++++++|++|..+ ++. +.|++.+|+.+. |+.||+ +|.....+++ ...+.++
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~--~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~~~~~l~ 174 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRG--EEH-WNLLDAEGQNHGPFSHVIIATPAPQASTLL-AAAPKLA 174 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEEC--SSC-EEEEETTSCEEEEESEEEECSCHHHHGGGG-TTCHHHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEe--CCE-EEEEeCCCcCccccCEEEEcCCHHHHHHhh-ccCHHHH
Confidence 456688888877654 7899999999999876 444 458888898764 899985 4443223332 2223332
Q ss_pred hhhhhhccCCCCceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCCcE-EEEEeCCCCccCCCCc-EEEEEEEe-e--
Q 009247 351 ESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSI-RVLQLGGNLAVCPLGM-FVLYFSAL-C-- 425 (539)
Q Consensus 351 ~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v-~v~~~~~~~~~cP~G~-~vi~~st~-~-- 425 (539)
.. + ....+..+..+.+.+++++.... ... .++. .++ ++...+..++..|.|. .+++.+.. .
T Consensus 175 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--------~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~ 240 (336)
T 1yvv_A 175 SV---V-AGVKMDPTWAVALAFETPLQTPM-QGC-FVQD--------SPLDWLARNRSKPERDDTLDTWILHATSQWSRQ 240 (336)
T ss_dssp HH---H-TTCCEEEEEEEEEEESSCCSCCC-CEE-EECS--------SSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHH
T ss_pred HH---H-hhcCccceeEEEEEecCCCCCCC-CeE-EeCC--------CceeEEEecCcCCCCCCCCcEEEEEeCHHHHHH
Confidence 22 2 11223444555555777754322 222 2331 123 2333232244444433 33332200 0
Q ss_pred cCccchHHHHHHHHHHHHhhhhcCCCCCCCCcccccccccCc----eEEEEEeeEeecCC-----CCCCcEEEcCCCCCC
Q 009247 426 DEVNQGKKLLHAALSALQKLLVTGTAGNSSTAQSEDMEEAKP----TLLWSALYIQDLSL-----GQFGSIISTPTPDGN 496 (539)
Q Consensus 426 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~-----~~~~~i~~~~~~~~~ 496 (539)
....+.++.++.+++.+....... ..+| ..-|...+.+.... ...++|+++......
T Consensus 241 ~~~~~~~~~~~~l~~~l~~~lg~~--------------~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g 306 (336)
T 1yvv_A 241 NLDASREQVIEHLHGAFAELIDCT--------------MPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS 306 (336)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCSSC--------------CCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT
T ss_pred HHhCCHHHHHHHHHHHHHHHhCCC--------------CCCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC
Confidence 011234555555555555432211 0112 12355333332211 123789999998888
Q ss_pred CChHHHHHHHHHHHHHhCCC
Q 009247 497 LNYNDLLDATEKLYRKLYPN 516 (539)
Q Consensus 497 ~~~~~~~~~~~~~~~~i~~~ 516 (539)
...++++.++.++.+.|...
T Consensus 307 ~gv~~a~~sg~~lA~~l~~~ 326 (336)
T 1yvv_A 307 GRVEGAWLSGQEAARRLLEH 326 (336)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988543
No 34
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.35 E-value=2e-12 Score=141.71 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=47.2
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCcee--EEEEecCCC-----cEEEE-EeCCCc--EEEcCEEEEC
Q 009247 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~--~I~~~~~~g-----~~~gV-~l~~G~--~i~a~~VI~~ 333 (539)
+.++.||++.|+++|.+.+.. |+.|+|+++|+ +|..+. ++ ..+.| ...+|+ +++||+||+.
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvT 409 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILA 409 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEEC
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEEC
Confidence 567999999999999876532 77899999999 998863 33 12456 446777 7899999984
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.15 E-value=1.8e-10 Score=117.27 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=48.0
Q ss_pred eEeecCC---cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCC--cEEEcCEEEEC
Q 009247 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG---~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G--~~i~a~~VI~~ 333 (539)
..+|..| ...+.++|.+.++..|++++++++|++|..+ +++.+.|++.+| .+++||+||..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 3445555 3588999999999999999999999999876 444356888888 47999999853
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.14 E-value=1.1e-09 Score=114.85 Aligned_cols=60 Identities=22% Similarity=0.223 Sum_probs=51.5
Q ss_pred eEeecC-C---cchHHHHHHHHHHHcCcEEEeCC---ceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~g-G---~geL~qal~r~~a~~Gg~~~L~~---~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
+++|.. | ...+.++|.+.++..|++|++++ +|++|..+ ++++++|++.+|++++||+||+
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~ 215 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFL 215 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEE
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEE
Confidence 445655 5 35888999999999999999999 99999887 7788889999998999999995
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.02 E-value=2.6e-09 Score=118.33 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=49.6
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+|.+|. ..+.++|.+.++..|++++++++|++|..+ +++ ++|++.+|++++||.||+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVl 467 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVL 467 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEE
Confidence 45666663 588899999999999999999999999887 555 578888888999999995
No 38
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.00 E-value=1.9e-10 Score=110.82 Aligned_cols=44 Identities=27% Similarity=0.344 Sum_probs=41.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccch
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~ 66 (539)
+||+|||||++||+||..|+++|++|+||||++.+||++++...
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~ 46 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS 46 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccc
Confidence 89999999999999999999999999999999999999987544
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.00 E-value=2.9e-09 Score=109.03 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.3
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
+++|.+|. ..+.++|.+.++..|++++++++|++|..+ +++ ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 45566663 588899999999999999999999999886 555 67887776 8999999963
No 40
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.96 E-value=1.5e-08 Score=108.50 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
.++||||||+|++||+||+.|+++|++|+||||++..||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.94 E-value=7.1e-09 Score=115.10 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.3
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~a~~VI~ 332 (539)
+.+|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ +.|++.+|+ +++||.||+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVl 463 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVIL 463 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEE
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEE
Confidence 45666664 588999999999999999999999999886 455 578888887 899999995
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.91 E-value=4e-09 Score=109.80 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=49.8
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE-CCCC
Q 009247 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSF 336 (539)
Q Consensus 271 ~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~-~p~~ 336 (539)
..||......+.++|.+.++..|++++++++|++|..+ ++. +.|++.+| +++||.||. +...
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEECCCCS
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEECCCCc
Confidence 35676666799999999999999999999999999876 444 56888777 899999995 3433
No 43
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.90 E-value=1.9e-08 Score=103.89 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=49.7
Q ss_pred eEeecCCcc---hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~g---eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..+|..|.. .+.++|.+.++..|++++++++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 456666654 78899999999999999999999999876 667788988777 7999999853
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.88 E-value=7.9e-08 Score=104.31 Aligned_cols=53 Identities=17% Similarity=0.243 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC--CCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~--~G~--~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++|+++++|++|..+ ++++++||++. +|+ +++|+.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 478899999999999999999999999886 13788888765 676 689999885
No 45
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.87 E-value=7.8e-09 Score=108.79 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=51.0
Q ss_pred eEeecCC-cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG-~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+|..+ ...+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 3577554 4688999999999999999999999999876 6777889998888899999985
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.87 E-value=5.4e-08 Score=105.50 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.8
Q ss_pred EeecCC---cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009247 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 272 ~~p~gG---~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~a~~VI~ 332 (539)
.+|..| ...+.+.|.+.++..|++|+++++|++|..+ + ++++||++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 345554 3478899999999999999999999999876 5 888888764 676 689998885
No 47
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.87 E-value=2.8e-08 Score=101.86 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=48.5
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
+++|..|. ..+.++|.+.++..|++++.+++|++|..+ ++++++|++.+| +++||+||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 34455553 578889999999999999999999999876 667777888777 7999999953
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=2.7e-08 Score=106.65 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..+.+.|.+.++..|++++++++|++|..+ ++++++|++.+|+++.|+.||..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 467788888888899999999999999876 67788899999999999999963
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.77 E-value=6.8e-08 Score=109.47 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=49.6
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
+++|..|. ..+.++|.+.++..|++++++++|++|..+ ++++++|++.+| +++||+||..
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 44566663 378999999999999999999999999876 677778888777 7999999953
No 50
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.74 E-value=5.2e-09 Score=107.38 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
|++|||||||||++||+||..|+++|++|+|+||++.+|..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 67899999999999999999999999999999999988764
No 51
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.60 E-value=1.2e-06 Score=94.81 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++|+++++|++|..+ + ++++||++. +|+ +++|+.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 478899999999999999999999999876 5 788888765 675 589999985
No 52
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.56 E-value=4e-08 Score=97.67 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=35.1
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 18 l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|++|||||||+|.+|++||.+|+|+|++|+++|++. +||.
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 35789999999999999999999999999999999975 5554
No 53
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.55 E-value=3.9e-08 Score=98.85 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~--~G~~VlvlE~~~~~GG~~~s 63 (539)
++||+|||+|.+||+||.+|++ .|++|+|+|+++++||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5899999999999999999974 69999999999999998753
No 54
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.50 E-value=7.4e-08 Score=98.63 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=38.0
Q ss_pred ccCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 9 ~~~~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
+.|.+|.++..+.++||||||||++|+++|+.|+++|++|+|||+++..||
T Consensus 4 ~~~~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 4 HHHHMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp ----------CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred chhhHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 456777777777889999999999999999999999999999999976555
No 55
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.49 E-value=6.6e-08 Score=96.96 Aligned_cols=59 Identities=8% Similarity=0.055 Sum_probs=40.1
Q ss_pred CccccCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC----CCCCCccccc
Q 009247 6 SESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN----PFYGSHFSSL 64 (539)
Q Consensus 6 ~~~~~~~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~----~~~GG~~~s~ 64 (539)
....++.++.++..+..+||||||+|++||++|..|++.|++|+++|++ ..+||.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 6 HHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp ---------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred cccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 3444555555555566799999999999999999999999999999994 5899987653
No 56
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.45 E-value=2e-06 Score=89.25 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=49.1
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009247 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~~ 336 (539)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+....
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 4578888889899999999999999999765 67888899999999999999975443
No 57
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.44 E-value=1.2e-07 Score=94.26 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=37.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
.+|||||||+|.+|++||..|++.|++|+++|++ .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 3699999999999999999999999999999985 6777664
No 58
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.42 E-value=4.8e-06 Score=86.09 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=49.3
Q ss_pred CcchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 277 G~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
...++.+.+.+.++..|.++++++.|++|..+ ++++.+|++.+|+++.||.||+...
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECCC
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECcC
Confidence 34578888889999999999999999999876 6788889999999999999997543
No 59
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.41 E-value=1.5e-07 Score=96.82 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
|.++||||||||++||++|+.|+++|++|+|+|+++..|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 457999999999999999999999999999999999887643
No 60
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.40 E-value=1.5e-07 Score=97.47 Aligned_cols=48 Identities=17% Similarity=0.045 Sum_probs=34.9
Q ss_pred CCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 12 VPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 12 ~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.++.++-.++++||||||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 13 ~~~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 13 SSGENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp ----------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred CCCCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 334444556789999999999999999999999999999999987653
No 61
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.38 E-value=2.1e-07 Score=93.93 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
|.++||+|||+|++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 45699999999999999999999999999999999999998764
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.36 E-value=2.6e-07 Score=92.16 Aligned_cols=43 Identities=28% Similarity=0.384 Sum_probs=38.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||+|||+|++|+++|..|++.|++|+++|+ ..+||.+..
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 3469999999999999999999999999999999 568887653
No 63
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.34 E-value=1.9e-07 Score=96.67 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
|.++||||||+|++|++||..|++.|.+|+|+|+++.+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 5679999999999999999999999999999999999887653
No 64
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.32 E-value=2.4e-07 Score=98.59 Aligned_cols=44 Identities=32% Similarity=0.429 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
|.+|||||||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 44699999999999999999999999999999999999998764
No 65
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.32 E-value=3.6e-07 Score=94.15 Aligned_cols=58 Identities=22% Similarity=0.222 Sum_probs=44.7
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
++.|.+|. ..+.++|.+.++..|++++++++|++|..+ ++.+ .|++.+| +++|++||.
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~v-~v~t~~g-~i~a~~VV~ 202 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADGV-SVTTDRG-TYRAGKVVL 202 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTEE-EEEESSC-EEEEEEEEE
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCeE-EEEECCC-EEEcCEEEE
Confidence 44555553 467888988888999999999999999876 4544 4776554 799999885
No 66
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=2.8e-07 Score=97.87 Aligned_cols=53 Identities=23% Similarity=0.337 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+|+++.||.||+..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~v-~v~~~~g~~i~aD~Vi~A~ 284 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENCY-NVVLTNGQTICADRVMLAT 284 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSSE-EEEETTSCEEEESEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCEE-EEEECCCcEEEcCEEEEee
Confidence 467888888888999999999999999765 4454 6888999999999999643
No 67
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.30 E-value=3.4e-07 Score=90.90 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|||||||+|.+|++||..|+|.|++|+++|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 359999999999999999999999999999999764
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.30 E-value=3.2e-07 Score=92.12 Aligned_cols=44 Identities=20% Similarity=0.344 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 45699999999999999999999999999999999999998753
No 69
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.30 E-value=3.8e-07 Score=89.76 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCcc
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG~~ 61 (539)
.++||||||+|++|+.+|..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999998743
No 70
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.29 E-value=3e-07 Score=97.17 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 4699999999999999999999999999999999999998764
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.29 E-value=3.3e-07 Score=93.09 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++..+||||||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 456799999999999999999999999999999999999998753
No 72
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.29 E-value=4.1e-07 Score=98.31 Aligned_cols=60 Identities=27% Similarity=0.356 Sum_probs=48.3
Q ss_pred eEeecCC--cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCC---C--cEEEcCEEEE
Q 009247 271 LIYPIYG--QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG--~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~---G--~~i~a~~VI~ 332 (539)
+.|+.+- ...+.+++.+.++..|++++++++|++|..+ ++++++|++.+ | .+++|+.||.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEE
Confidence 5566443 2578899999999999999999999999887 77888888753 4 3689999885
No 73
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.26 E-value=5.3e-07 Score=93.46 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=37.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~~~GG~~~ 62 (539)
|..+||||||||++||++|..|+++|.+ |+|+|+++.++....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~ 45 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 45 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccccee
Confidence 4568999999999999999999999999 999999988765433
No 74
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.26 E-value=7.5e-07 Score=88.84 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCcc
Q 009247 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (539)
++||+|||+|++||++|..|+++ |++|+|+|+++..||..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 46999999999999999999999 99999999999998744
No 75
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.26 E-value=5.6e-07 Score=91.67 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=45.4
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
++.|..|. ..+.++|.+.++..|++++.+++|++|..+ +++ +.|++.+| +++||+||.
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 198 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIV 198 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEE
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEE
Confidence 34455553 478899999999999999999999999875 444 46777776 599999985
No 76
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.25 E-value=4.4e-07 Score=97.74 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=41.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~ 65 (539)
.+.++||||||||++|+.+|..|++.|++|+++|+++.+||.|....
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 34569999999999999999999999999999999999999876443
No 77
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.24 E-value=8.6e-07 Score=98.29 Aligned_cols=60 Identities=15% Similarity=0.191 Sum_probs=47.1
Q ss_pred CCCCccccCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 3 GNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
|.|.+..|+..+.++ ....+||||||+|.+||.||..|++.|++|+++|+++++||.+..
T Consensus 373 g~e~~~~~~~~~~~~-~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 373 GEEWRRGWHPERIRA-KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTCCCSSCCCC-CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred CcccccccCccccCc-ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 444444444333333 345689999999999999999999999999999999999998654
No 78
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.24 E-value=8.6e-07 Score=90.15 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.++||||||+|++|+++|+.|+++|++|+|||++...+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 569999999999999999999999999999999875444
No 79
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.23 E-value=7.1e-07 Score=89.54 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCcc
Q 009247 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (539)
++||||||+|++||++|++|++. |++|+|+|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999998754
No 80
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.22 E-value=9.5e-07 Score=92.71 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~~~GG~~~s 63 (539)
..+||+|||||++||++|.+|++.|. +|+++|+++.+||.|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 46899999999999999999999999 99999999999998754
No 81
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.22 E-value=9.4e-07 Score=95.93 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC-CC--cEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~-~G--~~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467777888888899999999999999875 5666788876 67 5799999984
No 82
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.22 E-value=8.6e-07 Score=94.49 Aligned_cols=51 Identities=20% Similarity=0.100 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
..+.++|.+.++..|++++.+++|++|..+ + ++++|++ .+|+ +++|+.||.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEE
Confidence 578899999999999999999999999876 4 5677877 3676 789999985
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.22 E-value=5.9e-07 Score=89.71 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|++|+++|..|++.|++|+++|+++.+||.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 358999999999999999999999999999999999999885
No 84
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.21 E-value=8.5e-07 Score=88.09 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++||||||+|++|+++|..|++.|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 8998765
No 85
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.21 E-value=8.8e-07 Score=91.88 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~--~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++++.+++|++|..+. ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 3556677777777899999999999998762 3434567778888 699999884
No 86
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.21 E-value=1e-06 Score=90.89 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
+..+||||||||++||++|..|++.|.+|+|+|+++.++++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 45689999999999999999999999999999999877653
No 87
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.20 E-value=1e-06 Score=90.23 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..+.++|.+.++..|++++++++|++|..+ +++ +.|++.+| +++||.||..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 588899999999999999999999999875 444 45776555 7999999953
No 88
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.20 E-value=1e-06 Score=90.26 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
|..+||||||||++||++|..|++.|++|+|+|+++.+++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 45689999999999999999999999999999999988753
No 89
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.20 E-value=8.1e-07 Score=91.97 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=36.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCc
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~ 60 (539)
.++||||||+|++|+++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 359999999999999999999999 9999999998765554
No 90
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.19 E-value=6.8e-07 Score=94.30 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEE-eCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~-l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.+++++++|++|..+ +++.+.|+ +.+|+ +.||.||+..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a~ 264 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLAL 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEee
Confidence 477888888899999999999999999765 33435788 88888 9999999643
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.19 E-value=1e-06 Score=94.82 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=41.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+.++||||||||++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 345799999999999999999999999999999999999998753
No 92
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.18 E-value=1.1e-06 Score=83.75 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
|.++||||||+|++|+.+|..|++.|.+|+++|++.
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 356999999999999999999999999999999984
No 93
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.17 E-value=1.1e-06 Score=87.77 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 35699999999999999999999999999999999 78987754
No 94
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.17 E-value=8.4e-07 Score=90.19 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s 63 (539)
|.++||||||+|++|+++|..|++.|+ +|+++|+++ +||.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 456899999999999999999999999 999999999 9987654
No 95
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.17 E-value=1.1e-06 Score=93.05 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=36.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
.+|||||||+|.+|++||..|++.|++|+++|+++..||.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998555544
No 96
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.17 E-value=1.4e-06 Score=93.47 Aligned_cols=45 Identities=33% Similarity=0.468 Sum_probs=41.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++.++||||||||.+|++||..|++.|++|+++|+++++||.|..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 345799999999999999999999999999999999989998753
No 97
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.16 E-value=1.5e-06 Score=89.73 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
+..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 45689999999999999999999999999999999874
No 98
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.16 E-value=9.9e-07 Score=92.48 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=47.6
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEE---------------ecCCCcEEEEEeCCCcEE--EcCEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKL 330 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~---------------~~~~g~~~gV~l~~G~~i--~a~~V 330 (539)
+.+|..|. ..+.++|.+.++..|++++.+++|++|.. + ++++++|++.+| ++ +||.|
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~V 246 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKL 246 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEE
Confidence 34454442 37889999999999999999999999987 3 566778888777 68 99999
Q ss_pred EEC
Q 009247 331 VLD 333 (539)
Q Consensus 331 I~~ 333 (539)
|..
T Consensus 247 V~A 249 (448)
T 3axb_A 247 VVA 249 (448)
T ss_dssp EEC
T ss_pred EEC
Confidence 853
No 99
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.15 E-value=7.8e-07 Score=94.21 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=39.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++.+|||||||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 345799999999999999999999999999999976 78988744
No 100
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.15 E-value=1.6e-06 Score=91.14 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=40.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
.+.+||+|||+|.+||+||..|++.|++|+++|+++++||.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4568999999999999999999999999999999999999754
No 101
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.14 E-value=1.2e-06 Score=86.77 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-eccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~~~~~GG~~~s 63 (539)
..+||+|||+|++||+||..|++.|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 458999999999999999999999999999 999 788998754
No 102
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.13 E-value=1.6e-06 Score=94.67 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
..+||||||+|++|+++|..|+++|++|+++|+.+..||.+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~ 87 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIG 87 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTT
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccc
Confidence 4699999999999999999999999999999999999986533
No 103
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.13 E-value=8e-07 Score=94.12 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=40.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 34699999999999999999999999999999999999997754
No 104
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.12 E-value=1.6e-06 Score=92.85 Aligned_cols=43 Identities=30% Similarity=0.366 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC--------CCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~--------~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+++ .+||.|..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 46999999999999999999999999999999975 78997754
No 105
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=1.5e-06 Score=91.76 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
..++||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 34699999999999999999999999999999999999998754
No 106
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.5e-06 Score=87.29 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 345699999999999999999999999999999976 78887643
No 107
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.11 E-value=1.2e-06 Score=94.02 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=41.6
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCeEEEeccCCCCCCcccccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLS 65 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La-~~G~~VlvlE~~~~~GG~~~s~~ 65 (539)
+.++||||||||++|+.+|..|+ +.|++|+++|+++.+||.|....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ 52 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR 52 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC
Confidence 35689999999999999999999 99999999999999999876443
No 108
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.11 E-value=1.3e-06 Score=92.26 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+|||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999998764
No 109
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.11 E-value=1.3e-06 Score=92.41 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 34699999999999999999999999999999999999998754
No 110
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.10 E-value=1.1e-06 Score=93.07 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=39.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 4699999999999999999999999999999999999997643
No 111
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.10 E-value=1.8e-06 Score=92.94 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=42.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccccch
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~ 66 (539)
+.++||||||||++|+.+|..|++.|++|+++|+++.+||.|....+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~y 53 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRY 53 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 45689999999999999999999999999999999999998764433
No 112
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.10 E-value=1.8e-06 Score=91.73 Aligned_cols=43 Identities=30% Similarity=0.314 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEecc--------CCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~--------~~~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+ +..+||.|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 469999999999999999999999999999998 6689997754
No 113
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.10 E-value=1.6e-06 Score=94.22 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
.++.++|.+.+...|.++++++.|++|..+. +++++||.. .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 5788999998888999999999999998752 577888875 4676 589999885
No 114
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.09 E-value=1.5e-06 Score=91.49 Aligned_cols=42 Identities=26% Similarity=0.333 Sum_probs=39.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+|||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 489999999999999999999999999999999999998754
No 115
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.08 E-value=2.3e-06 Score=88.13 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCcEE-EEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~-gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.+... |++++++++|++|..+ +++++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 35666677777776 8999999999999876 44543 68888999999999984
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.08 E-value=1.4e-06 Score=91.78 Aligned_cols=43 Identities=26% Similarity=0.461 Sum_probs=38.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
|.++||||||+|++|+++|..|++.|++|+++|++ .+||.|..
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 34689999999999999999999999999999998 78887643
No 117
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.08 E-value=2.2e-06 Score=91.62 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=41.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe--CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l--~~G~--~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++++++++|++|..+ ++++++|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 367777878888899999999999999886 677766655 4574 799999984
No 118
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.08 E-value=1.4e-06 Score=92.74 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
+|||||||+|.+|++||..|++.|++|+++|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 5999999999999999999999999999999975 899764
No 119
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.07 E-value=1.4e-06 Score=91.69 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 009247 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~a~~VI~ 332 (539)
.+.+.|.+.++..|+++++++.|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 56677777777889999999999999876 6777777664 676 799999984
No 120
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.07 E-value=2.6e-06 Score=92.22 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=46.6
Q ss_pred eEeecCCc--chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 009247 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~--geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~a~~VI~ 332 (539)
+.|+.+.. ..+..++.+.++..|++++.+++|++|..+ ++++++|++. +|+ +++|+.||.
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~ 244 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVIN 244 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEE
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEE
Confidence 45664332 468888888889999999999999999887 6777788753 343 699999985
No 121
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.07 E-value=2.8e-06 Score=90.51 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=36.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.+.++||||||||++||++|+.|+++|.+|+||||++..+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 34679999999999999999999999999999999987754
No 122
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.06 E-value=3.2e-06 Score=90.76 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=36.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.++||||||||++||++|+.|++.|.+|+||||++..+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~ 42 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP 42 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 468999999999999999999999999999999987653
No 123
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.06 E-value=1.7e-06 Score=86.59 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEecc----CCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~----~~~~GG~~~s 63 (539)
+..+||+|||+|++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4568999999999999999999999999999999 6677887643
No 124
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.06 E-value=1.8e-06 Score=85.82 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
|..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 45689999999999999999999999999999975 7888654
No 125
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.05 E-value=2.2e-06 Score=90.49 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||||||+|.+|+++|..|++.|++|+++|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 35689999999999999999999999999999998 78998753
No 126
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.05 E-value=2.6e-06 Score=91.79 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=37.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
.++||||||||++||++|+.|++.|.+|+||||++..++..+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~ 66 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPR 66 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc
Confidence 468999999999999999999999999999999988765443
No 127
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.05 E-value=2.1e-06 Score=94.20 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
..|.++|.+.+...|++|+.++.|.+|..+ +++++||.. .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 378899999888899999999999999886 788888765 4676 489999985
No 128
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.05 E-value=2.5e-06 Score=92.67 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCeEEEeccCCCCCCcc
Q 009247 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~------G~~VlvlE~~~~~GG~~ 61 (539)
++||||||||++||++|+.|++. |.+|+||||++.+|+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 58999999999999999999999 99999999999988753
No 129
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.05 E-value=2.1e-06 Score=90.55 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEEC
Q 009247 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~a~~VI~~ 333 (539)
++.+.+.+.++..|.+++++++|++|..+ ++. +.|++.+|+ ++.+|.||+.
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a 259 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWA 259 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEEC
Confidence 67788888888999999999999999765 333 568888999 8999999964
No 130
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.9e-06 Score=91.20 Aligned_cols=54 Identities=4% Similarity=-0.031 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCC-cEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG-QDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G-~~i~a~~VI~~ 333 (539)
.++.+.+.+.++..|.++++++.|++|..+. +++.+.|++.+| +++.||.||+.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a 280 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWT 280 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEEC
Confidence 3677888888889999999999999997641 343456888899 78999999964
No 131
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.04 E-value=3.4e-06 Score=89.72 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
...+||+|||||++||++|..|++.|++|+|+|+++.+|++
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 34689999999999999999999999999999999988754
No 132
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.04 E-value=2.9e-06 Score=89.98 Aligned_cols=54 Identities=7% Similarity=0.135 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-----EEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-----~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+. ++. +.|++.+|+ ++.+|.||+..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~D~vi~a~ 285 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVYDTVLWAI 285 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEESEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEcCEEEECc
Confidence 4678888888899999999999999997652 333 346665554 78999999643
No 133
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.03 E-value=3.4e-06 Score=83.50 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCcccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s 63 (539)
|||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 68887653
No 134
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.03 E-value=2.2e-06 Score=90.08 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
++.+.+.+.++..|.++++++.|++|..+ ++..+.|++.+|+++.||.||+..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a~ 261 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWAI 261 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEECC
Confidence 67788888888999999999999999764 333346888899999999999643
No 135
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.03 E-value=2.9e-06 Score=91.21 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
..++||||||+|++||+||+.|++ |.+|+||||++..||..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 346899999999999999999999 99999999999887653
No 136
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.03 E-value=2.1e-06 Score=86.84 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~~~~~GG 59 (539)
+||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 49999999999999999999998 99999999986544
No 137
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.02 E-value=3.7e-06 Score=90.93 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
.++||||||||++||++|+.|+++|++|+|||+++..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 36899999999999999999999999999999998765
No 138
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.00 E-value=3.9e-06 Score=86.33 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
.+|+|||||++||++|..|+++|++|+||||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997643
No 139
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.00 E-value=2.5e-06 Score=89.96 Aligned_cols=43 Identities=30% Similarity=0.377 Sum_probs=39.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
|.++||||||+|.+|+.||..|++.|++|+++|+++ +||.|..
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~ 46 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLN 46 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCC
Confidence 346999999999999999999999999999999998 8987643
No 140
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.99 E-value=3.3e-06 Score=92.02 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
.+|.++|.+.+...|.+++.++.|.+|..+ +++++||.. .+|+ .++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899988888899999999999999887 788888875 4676 689999885
No 141
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.99 E-value=3.2e-06 Score=86.88 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
++||||||||++||++|..|+++|++|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999875
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.98 E-value=4.4e-06 Score=88.95 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=36.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.++||+|||||++||++|+.|+++|.+|+|||+++..+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999987653
No 143
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.98 E-value=4.4e-06 Score=81.88 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
+||+|||+|++|+++|..|++.|++|+++|+++..|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~ 40 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF 40 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc
Confidence 89999999999999999999999999999998765543
No 144
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.98 E-value=3.3e-06 Score=89.74 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+ +++.+.|++.+|+++.||.||+..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~ 284 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLAI 284 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEcc
Confidence 367888888889999999999999999765 333356888899899999999643
No 145
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.96 E-value=4.9e-06 Score=87.71 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCe---EEEeccCCCCCCccccc
Q 009247 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~---~G~~---VlvlE~~~~~GG~~~s~ 64 (539)
+||+|||||.+||+||..|++ .|.+ |+++|+++.+||.|...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999988753
No 146
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.96 E-value=3.1e-06 Score=90.01 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+ +++.+.|++.+|+++.||.||+..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~ 288 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMAI 288 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEECC
Confidence 367888888889999999999999999765 333356888899999999999653
No 147
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.95 E-value=5.6e-06 Score=92.26 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
...+||+|||||.+|+.||..|++.|++|+++|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 34689999999999999999999999999999999999998754
No 148
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=3.7e-06 Score=88.39 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+|||||||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 88987743
No 149
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.94 E-value=5.7e-06 Score=90.76 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHc--CcEEEeCCceeEEEEecCC--CcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNS--GSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~--Gg~~~L~~~V~~I~~~~~~--g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
.++.++|.+.+... |.+++.++.|..|+++. + |+++||.. .+|+ .++|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 47788888888777 99999999999998872 3 38888864 4565 589999985
No 150
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.94 E-value=5.1e-06 Score=89.96 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=35.5
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCCC
Q 009247 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (539)
Q Consensus 18 l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~-~~GG 59 (539)
....+|||||||||++|+.||.+|++.|.+|+++|++. .+|+
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 34456999999999999999999999999999999985 4554
No 151
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.94 E-value=1.1e-05 Score=88.61 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~GG 59 (539)
.++||||||||++||++|+.|++ .|.+|+||||++..+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~ 70 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME 70 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 46999999999999999999999 9999999999987653
No 152
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=3.5e-06 Score=88.68 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 458999999999999999999999999999999 789998763
No 153
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.93 E-value=5.5e-06 Score=84.86 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~ 57 (539)
.||||||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999999876
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.92 E-value=6.6e-06 Score=81.38 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
+|||+|||+|++|+++|..|++.|++|+++|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 4788765
No 155
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.91 E-value=3.6e-06 Score=89.59 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~a 274 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALMT 274 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEEC
Confidence 67888888889999999999999999765 444 3577788999999999963
No 156
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.91 E-value=9.2e-06 Score=82.21 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=36.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
+||||||+|++|+.||.+|++.|++|+++|++...+...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~ 42 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHG 42 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcccc
Confidence 69999999999999999999999999999999876665543
No 157
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.91 E-value=6.6e-06 Score=89.18 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 280 ELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 280 eL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
.+.++|.+.++. .|.++ +++.|+.|..+ ++++++|++.+|++++|+.||+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 566777777766 57777 67899998776 6778888888888899999885
No 158
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.91 E-value=8.5e-06 Score=87.56 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.+...|++++.+ .|++|..+ +++.+++|++.+|++++||.||.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLN-NRGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEECCSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEc-CCCcEEEEEECCCcEEEeCEEEE
Confidence 578888888888899999999 89999875 25566788888898999999994
No 159
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.90 E-value=9.7e-06 Score=89.51 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 458999999999999999999999999999999999999864
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=5.4e-06 Score=88.30 Aligned_cols=55 Identities=7% Similarity=0.005 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcE-EEcCEEEECCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~-i~a~~VI~~p~ 335 (539)
.++.+.+.+..+..|.++++++.|++|..+. ++. +.|++++|++ +.||.||+...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~~~g~~~~~~D~vi~a~G 272 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHLSDGRIYEHFDHVIYCVG 272 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEETTSCEEEEESEEEECCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEECCCcEEEECCEEEECCC
Confidence 4778888888899999999999999997641 233 4677889988 99999997543
No 161
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.90 E-value=5.6e-06 Score=88.00 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.++||||||+|++|+++|..|++. ++|+++|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 468999999999999999999999 999999999999998764
No 162
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.90 E-value=5.7e-06 Score=88.69 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
.++++.+.+..+..|..+++++.|+++... +++ +.|.+.+++++.+|.|++.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLvA 314 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLYA 314 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEEc
Confidence 578899999999999999999999999876 444 4577889999999999863
No 163
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.89 E-value=6e-06 Score=86.12 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999986
No 164
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.89 E-value=7.5e-06 Score=88.42 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.++. .|.++ +++.|+.|..+ ++++++|++.+|++++|+.||+
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEE
Confidence 3567777777776 47787 68899999876 6788899999999999999885
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.86 E-value=5.7e-06 Score=90.03 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHHcC-cEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
.+|.++|.+.+...| .+++.++.|++|..+ +++++||.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478888988888888 999999999999887 678877753 5676 689999885
No 166
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.85 E-value=1e-05 Score=87.17 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
..+||+||||+|.+|+++|.+|+++|++|++||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35699999999999999999999999999999998754
No 167
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.85 E-value=1.1e-05 Score=85.34 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC-CCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~-~G~~i~a~~VI~ 332 (539)
.++.++|.+.++..|.+++.+++| +|..+ ++++.+|.+. ++.++.|+.||+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~~a~~VVl 170 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVEDVDKLVL 170 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEEECCCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCCeEEeeeEEE
Confidence 478888988888889999999999 99876 6788787653 334578999885
No 168
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.84 E-value=1.1e-05 Score=73.07 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
|||+|||+|++|+.+|..|++.|++|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 169
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.84 E-value=1.1e-05 Score=87.17 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~ 56 (539)
..+||+||||+|.+|+++|.+|++.| .+|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999765
No 170
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.81 E-value=1e-05 Score=86.63 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~ 56 (539)
+||+||||+|.+|+++|.+|++ .|++|||||+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 6899999999644
No 171
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.81 E-value=1e-05 Score=85.03 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CeEEEeccCCCCCCcc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G-----~~VlvlE~~~~~GG~~ 61 (539)
..+||||||+|++||++|..|++.| .+|++||+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998444
No 172
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.78 E-value=1.7e-05 Score=85.69 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.5
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009247 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (539)
Q Consensus 18 l~~~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~ 55 (539)
+...+||+||||+|.+|+++|.+|++. |++|+|||+..
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 455689999999999999999999975 89999999987
No 173
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.76 E-value=1.1e-05 Score=84.79 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=39.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-C------CCeEEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~-~------G~~VlvlE~~~~~GG~~~ 62 (539)
|..+||+|||+|.+|+.||..|++ . |++|+++|+++++||.++
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 346899999999999999999999 7 999999999999999774
No 174
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.76 E-value=1.5e-05 Score=91.36 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
.++||||||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999887
No 175
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.76 E-value=1.8e-05 Score=86.84 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHHc-Cc-EEEeCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg-~~~L~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~a~~VI~ 332 (539)
..+.+.+.+.+... |. +++.++.|.+|..+ ++ +++||.. .+|+ .++|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 99999999999886 45 8888764 5666 589999985
No 176
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.76 E-value=2e-05 Score=84.97 Aligned_cols=52 Identities=25% Similarity=0.204 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.++.. |++++++ +|++|..+ +++.+++|++.+|++++||.||.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~-~~g~~~~v~~~~G~~i~ad~vI~ 246 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRD-ANGNIESVRTATGRVFDADLFVD 246 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEECCEEEE
Confidence 46888898888888 9999999 99999875 25667789888998999999994
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.74 E-value=2e-05 Score=84.34 Aligned_cols=41 Identities=15% Similarity=0.356 Sum_probs=37.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (539)
+..+||+|||||.+|++||.+|++.|++|+++|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 3469999999999999999999999999999996 5788775
No 178
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.74 E-value=1.3e-05 Score=86.00 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999877644
No 179
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.73 E-value=1.5e-05 Score=85.32 Aligned_cols=52 Identities=10% Similarity=0.180 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.++. .|++++.+ .|++|..+ +++.+++|++.+|++++||.||.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~ 227 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINN-QHGDIEKLITKQNGEISGQLFID 227 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEec-CCCcEEEEEECCCCEEEcCEEEE
Confidence 4678888888888 89999999 59999875 24566688888888899999994
No 180
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.71 E-value=1.9e-05 Score=83.49 Aligned_cols=52 Identities=8% Similarity=0.077 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +++++.||.||+..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a~ 278 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVSV 278 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEECS
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEECc
Confidence 46778888888999999999999999864 345656766 45689999999643
No 181
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.70 E-value=2.2e-05 Score=82.28 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCcc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (539)
|+.+||||||+|.+|+++|..|++. |++|+++|++++.|+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 3458999999999999999999998 88999999999887543
No 182
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.69 E-value=2.2e-05 Score=85.22 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
.++.+.+.+.++..|.+++++++|++|..+ ++ +|++.+|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 477888888889999999999999999653 23 477889999999999964
No 183
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.69 E-value=2e-05 Score=85.72 Aligned_cols=43 Identities=30% Similarity=0.329 Sum_probs=36.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC-C-------CCCCccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-P-------FYGSHFS 62 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~-~-------~~GG~~~ 62 (539)
...|||||||+|.+|++||.+|++.|++|+++|+. + .+||.|.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~ 155 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCV 155 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEe
Confidence 45699999999999999999999999999999983 3 3677543
No 184
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.69 E-value=1.5e-05 Score=84.97 Aligned_cols=52 Identities=21% Similarity=0.225 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.+...|++++.+ +|++|..+ +++.+++|++.+|++++||.||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~~~~~~v~~~~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQD-ERGWISGVHTKQHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEEcCEEEE
Confidence 478888888888899999999 99999875 25667789888898999999994
No 185
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.68 E-value=1.9e-05 Score=83.27 Aligned_cols=55 Identities=11% Similarity=0.127 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
..++.+.+.+.++..|.+++++++|++|..+ ++++. |++.+|+++.||.||+...
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~~~g~~i~aD~Vv~a~G 255 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVITDKRTLDADLVILAAG 255 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEEESSCEEECSEEEECSC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEEeCCCEEEcCEEEECCC
Confidence 4578888888899999999999999999764 55554 7778999999999996543
No 186
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.68 E-value=2.5e-05 Score=86.04 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=38.1
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCeEEEeccCCCC--CCcccccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSLS 65 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~-----~G~~VlvlE~~~~~--GG~~~s~~ 65 (539)
.++||+|||||++||++|+.|++ .|.+|+|+||++.. .|+...+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~ 58 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQ 58 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEC
Confidence 46899999999999999999999 99999999998764 45544444
No 187
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.66 E-value=2.8e-05 Score=89.85 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCcc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~ 61 (539)
+.+||+|||+|.+|++||..|++.|+ +|+++|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 188
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.64 E-value=2.5e-05 Score=82.14 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|++|+.+|..|++.| ++|+++|+++++||+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3479999999999999999999999 99999999999998764
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.60 E-value=3.9e-05 Score=81.63 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
+.+||+||||+|.+|+++|.+|++.|++|++||+....+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998765
No 190
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.56 E-value=4.2e-05 Score=80.21 Aligned_cols=52 Identities=6% Similarity=0.137 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
..++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+| ++.||.||+.
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEEC
Confidence 3578888888889999999999999999765 5555 7887666 8999999964
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.54 E-value=4.3e-05 Score=79.57 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.4
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~--~G~~VlvlE~~~~~GG~~ 61 (539)
.||||||||++|+++|..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 192
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.54 E-value=7.1e-05 Score=79.73 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
+.+||+||||+|.+|+++|.+|++.|++|++||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999999999999999998754
No 193
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.53 E-value=4.2e-05 Score=82.37 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.9
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~GG 59 (539)
+||+||||+|.+|+++|.+|++ .|++|+|||+....++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999887643
No 194
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.52 E-value=7.3e-05 Score=77.87 Aligned_cols=57 Identities=7% Similarity=0.014 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+.+++++.+|++.+|+++.||.||+...
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 467888888888999999999999999751015677788899999999999997543
No 195
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.52 E-value=5.2e-05 Score=79.46 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
..++.+.+.+.++..|.+++++++|++|..+ ++++..|.+ +|+++.||.||+..
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a~ 243 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILCI 243 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEECC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEECc
Confidence 3578888888899999999999999999764 566666765 78899999999643
No 196
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.47 E-value=9.1e-05 Score=80.28 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~ 57 (539)
+.+||+||||+|.+|+++|.+|++ .|++|++||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 89999999998755
No 197
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.45 E-value=9.4e-05 Score=79.50 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG 59 (539)
.+||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 569999999999999999999998 999999999987644
No 198
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.44 E-value=6.8e-05 Score=79.47 Aligned_cols=52 Identities=10% Similarity=0.141 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +|+++.||.||+..
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a~ 287 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILAV 287 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEECC
Confidence 46778888888899999999999999864 345545666 78899999999653
No 199
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.44 E-value=8.1e-05 Score=78.99 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
.++.+.+.+..+..|.++++++.|++|..+ +++ +.|++++|+++.||.||+...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a~G 279 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAAVG 279 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEECCC
Confidence 357788888889999999999999999765 444 468889999999999996533
No 200
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.44 E-value=5.2e-05 Score=78.29 Aligned_cols=51 Identities=14% Similarity=0.122 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~~ 336 (539)
.++.+.+.+..+..|.++++++.|++|.. + +|++++|+++.||.||+.+..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~---~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE----H---EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS----S---EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC----C---eEEECCCCEEeeeEEEECCCC
Confidence 46778888888999999999999999842 2 367789999999999965443
No 201
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.43 E-value=7.7e-05 Score=78.04 Aligned_cols=52 Identities=10% Similarity=0.026 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +|+++.||.||+..
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~d~vi~a~ 242 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DKNAYDADLVVVAV 242 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CCCEEECCEEEECc
Confidence 46788888888899999999999999864 344445665 67789999999643
No 202
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.43 E-value=9e-05 Score=75.86 Aligned_cols=53 Identities=17% Similarity=0.078 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p 334 (539)
.++.+.+.+.++..|.+++++++|++|..+ ++. +.|++++|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a~ 239 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSAV 239 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEECc
Confidence 467888888888999999999999999765 343 46888899999999999754
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.38 E-value=0.00011 Score=76.06 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=41.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
.++.+.+.+..+..|.++++++.|++|. + + +|++.+|+++.||.||+...
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECcC
Confidence 4677888888899999999999999986 3 3 57788999999999997543
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.30 E-value=0.00016 Score=73.67 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
++.+.+.+..+..|.++++++.|++|. .+ +|++.+|+ +.+|.||+.
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~----~~---~v~~~~g~-i~~D~vi~a 229 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN----EE---GVLTNSGF-IEGKVKICA 229 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC----SS---EEEETTEE-EECSCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE----ee---EEEECCCE-EEcCEEEEC
Confidence 677888888889999999999999985 12 46778888 999999864
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.29 E-value=0.00013 Score=76.14 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~~ 57 (539)
..||||||||++|+++|..|++ .|++|+++|+++++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 3699999999999999999999 89999999999975
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.25 E-value=0.00021 Score=73.79 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~p~ 335 (539)
.++.+.+.+..+..|.++++++.|++|..+ +++.+|++++|+++.||.||+...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a~G 238 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALICVG 238 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEeeC
Confidence 467778888888999999999999998653 355678899999999999997543
No 207
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.24 E-value=7.8e-05 Score=79.28 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+-|||||||+|.+||++|++|.++|...+++|+.+..|+.+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKIC 80 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEE
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCccee
Confidence 34599999999999999999999988776677776666665543
No 208
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.22 E-value=0.00019 Score=77.43 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~G 58 (539)
.||+|||||++|++||..|++. |++|+++|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 89999999999987
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.03 E-value=0.0003 Score=74.66 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
++..|||||+|.+|+.+|..|++.|++|+++|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 456899999999999999999999999999999986
No 210
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.93 E-value=0.00047 Score=70.78 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~~~GG~~ 61 (539)
..|||||+|.+|++||.+|++.|+ +|+++|++++++.+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p 43 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY 43 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc
Confidence 369999999999999999998874 899999999765443
No 211
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.89 E-value=0.00072 Score=69.20 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
++..|||||+|++|+.||..|++.|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 356899999999999999999888999999999999874
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.79 E-value=0.00077 Score=70.24 Aligned_cols=48 Identities=10% Similarity=0.137 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
.++.+.+.+..+..|.++++++.|+++. .+ .|++++|+++.||.||+.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEEC
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEEE
Confidence 5777888888899999999999999873 22 366799999999999964
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.75 E-value=0.00078 Score=69.99 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCC
Q 009247 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~ 57 (539)
.|||||+|.+|++||..|++.| .+|+++|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 789999999874
No 214
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.62 E-value=0.011 Score=50.31 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|||+|..|..+|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 215
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.54 E-value=0.012 Score=51.44 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|+|||+|..|+.+|..|++.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 216
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.50 E-value=0.014 Score=60.78 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=35.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..+|+|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999987653
No 217
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.42 E-value=0.011 Score=60.25 Aligned_cols=39 Identities=15% Similarity=0.003 Sum_probs=35.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh
Confidence 479999999999999999999999999999999887653
No 218
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.32 E-value=0.018 Score=50.22 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+..|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34579999999999999999999999999999973
No 219
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.16 E-value=0.026 Score=48.41 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
-.|+|||.|-.|..+|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999974
No 220
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.08 E-value=0.017 Score=56.59 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999987643
No 221
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.96 E-value=0.023 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|..|..+|..|++.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.78 E-value=0.021 Score=59.55 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998865
No 223
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.75 E-value=0.028 Score=57.12 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++....
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 579999999999999999999999999999999876653
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.67 E-value=0.028 Score=58.73 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988755
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.61 E-value=0.028 Score=58.50 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 226
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.57 E-value=0.032 Score=58.41 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999988763
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.55 E-value=0.027 Score=56.88 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 5799999999999999999999999999999998766
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.54 E-value=0.029 Score=58.39 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 5799999999999999999999999999999988653
No 229
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.48 E-value=0.034 Score=49.98 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~ 55 (539)
....|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 345799999999999999999999 99999999975
No 230
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.48 E-value=0.037 Score=45.34 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 55 (539)
..|+|+|+|..|..++..|.+.| ++|.+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 9999999863
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.20 E-value=0.043 Score=56.27 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999987654
No 232
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.20 E-value=0.053 Score=56.28 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4699999999999999999999999999999876
No 233
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.20 E-value=0.037 Score=54.05 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
..|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.13 E-value=0.04 Score=57.25 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988654
No 235
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.12 E-value=0.048 Score=52.94 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 34699999999999999999999999999999863
No 236
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.10 E-value=0.04 Score=54.40 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-.|.|||+|.-|.-.|..++++|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998753
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.75 E-value=0.053 Score=56.63 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4799999999999999999999999999999988653
No 238
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.71 E-value=0.066 Score=57.23 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3467999999999999999999999999999998763
No 239
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.69 E-value=0.055 Score=54.47 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=32.3
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 17 ~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
++++....|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456666789999999999999999999999999999875
No 240
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.68 E-value=0.071 Score=56.85 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45799999999999999999999999999999876
No 241
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.65 E-value=0.074 Score=56.78 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 3457999999999999999999999999999998763
No 242
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.64 E-value=0.039 Score=57.90 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 35799999999999999999999999999999988765
No 243
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.61 E-value=0.054 Score=46.06 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|.+.|++|.++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999999999999863
No 244
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.53 E-value=0.065 Score=52.72 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
....|.|||+|..|...|..|+++|++|.+++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346799999999999999999999999999999864
No 245
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.52 E-value=0.051 Score=50.41 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|+|||+|-.|..+|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999864
No 246
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.50 E-value=0.066 Score=55.97 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998765
No 247
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.47 E-value=0.07 Score=55.12 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999887554
No 248
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.43 E-value=0.062 Score=56.50 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 4799999999999999999999999999999988655
No 249
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.37 E-value=0.078 Score=51.90 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++|++|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999874
No 250
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.37 E-value=0.054 Score=53.42 Aligned_cols=49 Identities=20% Similarity=0.165 Sum_probs=31.1
Q ss_pred ccccCCC-CCCCC-CCCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 7 ESELPVP-PYPPI-EPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 7 ~~~~~~~-~~~~l-~~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
+..|+.+ +++.. .+....|.|||+|..|...|..|+++|+ +|.+++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 7 HSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred cccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4556655 45444 2234679999999999999999999999 999999973
No 251
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.34 E-value=0.11 Score=52.08 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.8
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
+.+|..|. .++.++|.+.++..|++++++++|++|..+ ++++ +|++.+| +++||.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 55666664 578899999999999999999999999875 5555 7887766 8999999853
No 252
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.34 E-value=0.068 Score=55.73 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 253
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.31 E-value=0.066 Score=56.14 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 254
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.29 E-value=0.057 Score=56.64 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 5799999999999999999999999999999988754
No 255
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=93.27 E-value=0.076 Score=55.89 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 57999999999999999999999999999999987654
No 256
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.25 E-value=0.073 Score=54.54 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 47999999999999999999999999999999887543
No 257
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.21 E-value=0.072 Score=53.28 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|.|||+|..|...|..|+++|++|.+++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34579999999999999999999999999999863
No 258
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.09 E-value=0.08 Score=51.55 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998773
No 259
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.08 E-value=0.092 Score=48.41 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|.|||+|..|...|..|+++|++|.+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998865
No 260
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.06 E-value=0.071 Score=53.29 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 479999999999999999999999999999988754
No 261
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.06 E-value=0.086 Score=54.67 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=34.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
.|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 8999999999999999999999999999999987654
No 262
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.99 E-value=0.06 Score=56.15 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988764
No 263
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.89 E-value=0.09 Score=50.76 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.|.|||+|..|...|..|+++|++|.+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998864
No 264
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.88 E-value=0.085 Score=52.49 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
...|.|||+|.-|...|..|+++|++|.+++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 357999999999999999999999999999985
No 265
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.87 E-value=0.09 Score=48.70 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999863
No 266
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.87 E-value=0.089 Score=51.96 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999976
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.87 E-value=0.11 Score=53.69 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++....
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~ 186 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM 186 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc
Confidence 379999999999999999999999999999999876543
No 268
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.85 E-value=0.094 Score=49.65 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.....|.|||+|.-|...|..|+++|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 344679999999999999999999999999999874
No 269
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.83 E-value=0.097 Score=53.97 Aligned_cols=33 Identities=30% Similarity=0.389 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..+.|||.|..||.+|+.||++|++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999875
No 270
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.82 E-value=0.092 Score=51.40 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999875
No 271
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.80 E-value=0.088 Score=52.03 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999999853
No 272
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.80 E-value=0.089 Score=55.11 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4799999999999999999999999999999988653
No 273
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.77 E-value=0.097 Score=52.61 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|.|||+|.-|...|..|+++|++|.++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999874
No 274
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.70 E-value=0.092 Score=51.09 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 46999999999999999999999999999999887
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.70 E-value=0.092 Score=55.34 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999988754
No 276
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.67 E-value=0.11 Score=51.73 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
...|.|||+|-.|..+|..|++.|+ +|.++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3579999999999999999999998 999999985
No 277
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.65 E-value=0.11 Score=53.01 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999999876553
No 278
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.59 E-value=0.095 Score=51.57 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|--|.+.|..|+++|++|.+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999975
No 279
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.54 E-value=0.094 Score=51.90 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCC----CeEEEeccCC
Q 009247 15 YPPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (539)
Q Consensus 15 ~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~~~ 55 (539)
.+++++....|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 15 ~~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 15 TENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CchhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3556666678999999999999999999999 8999999875
No 280
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.48 E-value=0.11 Score=50.90 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 281
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.47 E-value=0.11 Score=54.26 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4799999999999999999999999999999987654
No 282
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.43 E-value=0.12 Score=52.92 Aligned_cols=40 Identities=25% Similarity=0.218 Sum_probs=35.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
...|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 3469999999999999999999999999999999876543
No 283
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.42 E-value=0.11 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988764
No 284
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.41 E-value=0.12 Score=53.78 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|.|||.|.+|+++|..|++.|++|.+.|++..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 45799999999999999999999999999999874
No 285
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.40 E-value=0.11 Score=51.21 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 286
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.40 E-value=0.19 Score=51.85 Aligned_cols=41 Identities=27% Similarity=0.294 Sum_probs=36.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~ 60 (539)
|.++||||||+|++|+++|+.|+++| ++|+|||++..+|+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g 62 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSG 62 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCC
Confidence 46799999999999999999999999 999999996666543
No 287
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.33 E-value=0.11 Score=54.07 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
+.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999975
No 288
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=92.32 E-value=0.1 Score=54.47 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
-.|+|||+|.+|+-+|..|++.|.+|+++++++.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 469999999999999999999999999999987653
No 289
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.32 E-value=0.11 Score=50.75 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999998763
No 290
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.32 E-value=0.11 Score=50.93 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 469999999999999999999999999999998764
No 291
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.29 E-value=0.11 Score=53.86 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4699999999999999999999999999999987654
No 292
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.26 E-value=0.11 Score=51.24 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 579999999999999999999999999999998763
No 293
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.19 E-value=0.17 Score=52.85 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.15 E-value=0.11 Score=53.76 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~~~ 57 (539)
.+|+|||+|.+|+-+|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 295
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.10 E-value=0.12 Score=50.51 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999875
No 296
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.06 E-value=0.12 Score=50.79 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999987644
No 297
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.05 E-value=0.13 Score=50.13 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=30.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+..|.|||+|+-|...|..|+ +|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3568999999999999999999 999999999875
No 298
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.01 E-value=0.14 Score=53.51 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-eEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~-G~-~VlvlE~~~~ 56 (539)
..|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999999976
No 299
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.98 E-value=0.13 Score=53.21 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...+.|||+|.-|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46799999999999999999999999999999865
No 300
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.97 E-value=0.12 Score=53.50 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 301
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.88 E-value=0.13 Score=54.92 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987654
No 302
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.85 E-value=0.32 Score=49.09 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
.++||||||+|++|+++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999998765
No 303
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.74 E-value=0.14 Score=53.75 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 46999999999999999999999999999999987653
No 304
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.70 E-value=0.14 Score=47.65 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=31.1
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|+|.|+ |.-|..+|..|.++|++|.++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4467999997 9999999999999999999999874
No 305
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.62 E-value=0.16 Score=47.27 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
+.....|+|||+|-.|...|..|.++|.+|+|++++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 455678999999999999999999999999999975
No 306
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.62 E-value=0.083 Score=49.54 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
...|.|||+|+-|...|..|+++|++|..+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 357999999999999999999999999999985
No 307
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.60 E-value=0.098 Score=54.55 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+.|||+|+|-.|..+|..|+..|++|+++|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999984
No 308
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=91.60 E-value=0.14 Score=50.05 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 469999999999999999999999999999988764
No 309
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.58 E-value=0.23 Score=51.71 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 210 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT 210 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC
Confidence 57999999999999999999999999999999987654
No 310
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.52 E-value=0.18 Score=52.36 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..++|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999887553
No 311
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.45 E-value=0.16 Score=53.01 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 579999999999999999999999999999998865
No 312
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.43 E-value=0.32 Score=48.48 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
++||||||+|++|+++|+.|+++|++|+|||+++..+|..++
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999887765443
No 313
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.42 E-value=0.19 Score=49.47 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999986
No 314
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.37 E-value=0.23 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.3
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.||| +|.-|...|..|+++|++|.+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998764
No 315
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=91.35 E-value=0.25 Score=52.85 Aligned_cols=45 Identities=27% Similarity=0.347 Sum_probs=40.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+.+|||||||||++|+.+|+.|+++|++|+++|+++..||....
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ 59 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSR 59 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccC
Confidence 345799999999999999999999999999999999887776543
No 316
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.34 E-value=0.12 Score=53.59 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~ 57 (539)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999999 9999999998753
No 317
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.28 E-value=0.17 Score=49.02 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.|||+|..|...|..|+++|++|.+++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3689999999999999999999999999999854
No 318
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.23 E-value=0.12 Score=50.38 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|--|.+.|..|+++|++|.+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999874
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.22 E-value=0.1 Score=50.21 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=33.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
+.....|+|||+|-.|+..|..|.+.|.+|+|++++..
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 33556799999999999999999999999999998653
No 320
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.22 E-value=0.17 Score=49.63 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999987654
No 321
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.13 E-value=0.2 Score=49.50 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|.|||+|..|...|..|+++|++|.+++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999875
No 322
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.13 E-value=0.18 Score=50.35 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 4799999999999999999999999999999987654
No 323
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.13 E-value=0.2 Score=48.18 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|+|.|||.-|..++..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998754
No 324
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.11 E-value=0.18 Score=49.98 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
...|.|||+|--|...|..|+++|++|.+++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 367999999999999999999999999999986
No 325
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.09 E-value=0.48 Score=44.07 Aligned_cols=52 Identities=17% Similarity=0.061 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
.++.+.|.+.++.. |.+++ +++|++|..+ ++++++|++.+|++++||.||..
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~A 120 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVLA 120 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 36667777777776 77777 6899999876 67777888889989999999953
No 326
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.00 E-value=0.15 Score=52.82 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|.|||.|.+|+++|..|++.|++|.+.|.+...=
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 469999999999999999999999999999988653
No 327
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.97 E-value=0.19 Score=53.22 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999876553
No 328
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.93 E-value=0.19 Score=49.55 Aligned_cols=34 Identities=15% Similarity=0.401 Sum_probs=29.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|.|||+|--|...|..|+++|++|.++ ++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3467999999999999999999999999999 664
No 329
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.93 E-value=0.23 Score=48.74 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|.|||+|..|...|..|++.|++|.+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36799999999999999999999999999998753
No 330
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.84 E-value=0.2 Score=52.49 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 331
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.81 E-value=0.19 Score=51.61 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.|||+|..|+..|..|++ |++|+++|++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 579999999999999999998 999999998753
No 332
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.74 E-value=0.12 Score=47.92 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-eccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~~~ 55 (539)
....|.|||+|.-|...|..|+++|++|.+ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 346799999999999999999999999999 88764
No 333
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.73 E-value=0.19 Score=52.55 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=32.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|++.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4567889999999999999999999999999999873
No 334
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.73 E-value=0.21 Score=52.14 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 5799999999999999999999999999999988754
No 335
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.73 E-value=0.21 Score=49.16 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
..|.|||+|-.|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999974
No 336
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.69 E-value=0.37 Score=51.62 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
.++||||||||++|+.+|+.|+++|++|+|||+++..+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4699999999999999999999999999999999876664
No 337
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.65 E-value=0.22 Score=45.63 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.7
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999864
No 338
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.64 E-value=0.18 Score=54.34 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
-.|+|||+|..|+-+|..|++.|.+|++++++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 339
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.62 E-value=0.31 Score=49.01 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCcEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~~i~a~~VI~ 332 (539)
..+.+.|.+.++..|++++++++|++|..+ ++++++|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 467788888888899999999999999887 677777876 3566899999884
No 340
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.62 E-value=0.22 Score=50.66 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999999864
No 341
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.61 E-value=0.22 Score=49.13 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999975
No 342
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.56 E-value=0.24 Score=53.29 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 46999999999999999999999999999999887654
No 343
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.55 E-value=0.25 Score=48.32 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 344
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=90.47 E-value=0.22 Score=52.35 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCc
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc
Confidence 57999999999999999999999999999999987653
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.42 E-value=0.13 Score=44.10 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999874
No 346
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.39 E-value=0.18 Score=51.84 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-..-|||.|..|+..|..|+++|++|+++|++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3578999999999999999999999999999854
No 347
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.39 E-value=0.26 Score=49.12 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||.|+-|...|..|+++|++|.++|++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.30 E-value=0.23 Score=50.91 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|||||.|-.|..+|..|.+.|++|+++|++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999853
No 349
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.30 E-value=0.2 Score=51.11 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 350
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.26 E-value=0.25 Score=51.62 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999985
No 351
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.23 E-value=0.45 Score=47.70 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
++||||||+|++|+++|+.|+++|++|+|+|+++..|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999998766
No 352
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.20 E-value=0.28 Score=48.29 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=32.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
|....|.|||+|..|..+|..|++.|+ .|.++|.+.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 445679999999999999999999999 999999973
No 353
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.16 E-value=0.19 Score=53.21 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998875
No 354
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.13 E-value=0.19 Score=49.66 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 53 (539)
.|.|||+|..|...|..|+++|++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 355
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.09 E-value=0.24 Score=48.03 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 5799999999999999999999999999999988765
No 356
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.04 E-value=0.26 Score=48.31 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|--|.+.|..|+ +|++|.+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 357
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.03 E-value=0.22 Score=50.06 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 358
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.01 E-value=0.19 Score=48.57 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999864
No 359
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.88 E-value=0.64 Score=48.79 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~ 56 (539)
+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 699999999999999999999 9999999999864
No 360
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.77 E-value=0.27 Score=47.83 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 361
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.76 E-value=0.31 Score=48.29 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|..+|..|++.|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999985
No 362
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.75 E-value=0.32 Score=48.01 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|..+|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 363
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.68 E-value=0.29 Score=47.92 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999974
No 364
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.67 E-value=0.25 Score=46.88 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 457999999999999999999999 79999999865
No 365
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.64 E-value=0.2 Score=48.94 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CeEEEecc
Q 009247 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~-----G-~~VlvlE~ 53 (539)
..|.|||+|.-|...|..|+++ | ++|.++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 366
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.63 E-value=0.22 Score=50.19 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999985
No 367
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.60 E-value=0.29 Score=50.91 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~ 57 (539)
..+|+|||+|..|+-+|..|.+.|. +|+++++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999997 59999998865
No 368
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.58 E-value=0.25 Score=51.48 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 55 (539)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999874
No 369
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=89.53 E-value=0.64 Score=49.44 Aligned_cols=37 Identities=8% Similarity=0.146 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~ 56 (539)
+..+||||||||++|+++|+.|++ .|.+|+|||+.+.
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 346899999999999999999999 9999999999764
No 370
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.51 E-value=0.19 Score=50.25 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999999876
No 371
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=89.45 E-value=0.57 Score=48.42 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
.++||||||||++||++|..|+++|++|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3689999999999999999999999999999999864
No 372
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.40 E-value=0.31 Score=47.32 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 373
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.39 E-value=0.32 Score=47.46 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999988744
No 374
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.37 E-value=0.31 Score=47.17 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999999887
No 375
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.33 E-value=0.3 Score=51.12 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 55 (539)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999863
No 376
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.22 E-value=0.34 Score=46.51 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999874
No 377
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.12 E-value=0.36 Score=50.56 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 4699999999999999999999999999998753
No 378
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.01 E-value=0.3 Score=48.12 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 379
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.92 E-value=0.54 Score=47.47 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
.++||||||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 380
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.89 E-value=0.31 Score=46.32 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999874
No 381
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.88 E-value=0.36 Score=50.39 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 382
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.87 E-value=0.37 Score=47.31 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|++. |++|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 89999999985
No 383
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.82 E-value=0.38 Score=50.83 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 243 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 243 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc
Confidence 359999999999999999999999999999853
No 384
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=88.72 E-value=0.38 Score=47.56 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~-aA~~La~~G~~VlvlE~~~~ 56 (539)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 78899999999999999865
No 385
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.70 E-value=0.37 Score=46.66 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999875
No 386
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.32 E-value=0.44 Score=45.99 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---eEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~---~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999975
No 387
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.31 E-value=0.38 Score=46.02 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|.|+|.-|..++..|.++|++|..+.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999875
No 388
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=88.23 E-value=0.69 Score=46.94 Aligned_cols=38 Identities=26% Similarity=0.392 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 58 (539)
.++||||||||++||++|+.|+++|++|+|+|+++..+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45999999999999999999999999999999997543
No 389
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=88.21 E-value=1 Score=47.05 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 63 (539)
.+|||||||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 46788997754
No 390
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.19 E-value=0.53 Score=45.14 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.|.+|.+++++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998873
No 391
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=88.17 E-value=0.46 Score=44.80 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=29.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.-|+|.|+ |--|..+|..|++.|++|.+++++..
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 35888886 67899999999999999999998764
No 392
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.14 E-value=0.41 Score=45.81 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 57999999999999999999999 9999998876
No 393
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.12 E-value=0.47 Score=43.26 Aligned_cols=32 Identities=31% Similarity=0.364 Sum_probs=29.4
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|+|+| +|..|..++..|.++|++|.++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 489999 59999999999999999999999874
No 394
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=88.11 E-value=0.94 Score=47.03 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~G 58 (539)
..+||||||+|++|++||..|++. |++|+++|++++.|
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 347999999999999999999999 99999999999875
No 395
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.10 E-value=0.22 Score=46.55 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999874
No 396
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=88.05 E-value=1.1 Score=46.89 Aligned_cols=44 Identities=32% Similarity=0.359 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCcccc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 63 (539)
..+|||||||+|.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 346999999999999999999999 999999999 46789997754
No 397
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.03 E-value=0.42 Score=46.27 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 398
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.01 E-value=0.48 Score=50.33 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.++|||+|..|+-.|..+++-|.+|+++++...+-+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~ 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc
Confidence 4699999999999999999999999999998765533
No 399
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.01 E-value=0.43 Score=49.93 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+|.|||+|..|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 400
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.90 E-value=0.93 Score=48.64 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeC------CC---------cEEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA------SG---------QDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~------~G---------~~i~a~~VI~ 332 (539)
+.|.+.|.+.++..|++|++++.|++|..++ ++++++|++. +| .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 4788888888888999999999999998862 4677788875 33 6899999995
No 401
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.87 E-value=0.37 Score=53.12 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 402
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.83 E-value=0.5 Score=46.62 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
|....|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 344679999999999999999999999 999999976
No 403
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.81 E-value=0.42 Score=48.78 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999875
No 404
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.78 E-value=0.52 Score=42.35 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+ |..|..++..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999999874
No 405
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=87.74 E-value=0.42 Score=49.73 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-eEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La--------------------~~G~-~VlvlE~~~~~ 57 (539)
-.|+|||+|..|+-+|..|+ +.|. +|.++++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6787 79999998654
No 406
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.73 E-value=0.46 Score=47.52 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-|+|||+|..|..+|.++.+.|++|.++|+++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 489999999999999999999999999998764
No 407
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.67 E-value=0.45 Score=45.88 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.7
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+ |..|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999874
No 408
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.66 E-value=0.51 Score=49.23 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
-.++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 469999999999999999999999999999854
No 409
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.64 E-value=0.46 Score=46.93 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=31.3
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
...-|+|.|| |.-|..++..|.+.|++|.++.++..-
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 4467999998 999999999999999999999998643
No 410
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.60 E-value=0.46 Score=49.88 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 411
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.58 E-value=0.48 Score=45.47 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 412
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.51 E-value=0.46 Score=49.70 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
++|.|||+|..|...|..|+++|++|.+++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999863
No 413
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=87.45 E-value=1.1 Score=46.66 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+ +.+||.|..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 369999999999999999999999999999999 789997754
No 414
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.43 E-value=0.43 Score=45.19 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
...|+|||+|=.|+.+|..|+++|. +++++|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999996 899999863
No 415
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.42 E-value=0.41 Score=47.14 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 416
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.39 E-value=0.58 Score=46.12 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
|....|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 344679999999999999999999998 999999986
No 417
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=87.38 E-value=1.3 Score=46.36 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~G 58 (539)
+.++||||||+|.+|+.||..|+++ |.+|+++|++++.|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4679999999999999999999887 89999999998765
No 418
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.27 E-value=0.59 Score=45.11 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=30.9
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 24 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
.|+|.|| |+-|..++..|.++|++|.++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5899997 999999999999999999999887644
No 419
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.26 E-value=0.55 Score=43.01 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=29.4
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|+|.|+ |..|..++..|.++|++|.++.++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899997 9999999999999999999998863
No 420
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.18 E-value=0.52 Score=46.84 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|++|.+.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 459999999999999999999999999999875
No 421
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.15 E-value=0.65 Score=45.58 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.2
Q ss_pred CCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 15 YPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 15 ~~~l~~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.++-.....-|+|.|+ |.-|..++..|+++|++|.++.++.
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3333344457999997 9999999999999999999999864
No 422
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.10 E-value=0.85 Score=48.39 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
...|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 45799999999999999999999999999998754
No 423
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=87.08 E-value=1.1 Score=46.86 Aligned_cols=40 Identities=38% Similarity=0.464 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
|+++||||||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 3569999999999999999999999999999999975444
No 424
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.02 E-value=0.33 Score=49.50 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCeEEEecc
Q 009247 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLDP 53 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~ 53 (539)
+.|.|||+|..|...|..|++ +|++|.++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 469999999999999999998 5999999983
No 425
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=86.97 E-value=0.32 Score=49.54 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=40.9
Q ss_pred eEeecCCc---chHHHHHHHHHHHcCcEEEeCCcee---------EEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~---geL~qal~r~~a~~Gg~~~L~~~V~---------~I~~~~~~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
++.|..|. ..+.++|.+.++..|++++.+++|+ +|..+ ++++ +|++.+| +++||.||.
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~ 230 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIV 230 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEE
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEE
Confidence 44555553 5788999999999999999999999 88665 4555 7776666 799999885
No 426
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.94 E-value=0.55 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 427
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=86.83 E-value=1.5 Score=38.57 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=40.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~a~~VI~~ 333 (539)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++.+| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 477888888888999999999 99999765 333 46787788 8999999964
No 428
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.82 E-value=0.38 Score=48.52 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~~~~ 56 (539)
..|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999998765
No 429
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=86.74 E-value=1.2 Score=47.24 Aligned_cols=37 Identities=5% Similarity=0.170 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~~ 57 (539)
..+||||||||++|+++|+.|++ .|.+|+|||+.+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 46899999999999999999999 99999999997643
No 430
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.70 E-value=0.55 Score=47.26 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|+.+|..|+..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 431
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.64 E-value=0.52 Score=45.88 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.|-+||-|..|+..|..|.++|++|.++|++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998764
No 432
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.59 E-value=0.58 Score=44.27 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999874
No 433
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.53 E-value=0.57 Score=46.99 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 434
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.53 E-value=0.62 Score=45.64 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999874
No 435
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=86.53 E-value=1.2 Score=46.04 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcccc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||+|.+|+++|..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 369999999999999999999999999999999 789997653
No 436
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=86.47 E-value=1.1 Score=47.02 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
+.++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 45699999999999999999999999999999999854
No 437
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.46 E-value=0.42 Score=52.63 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999985
No 438
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.44 E-value=0.56 Score=45.08 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999875
No 439
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.38 E-value=0.5 Score=46.23 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7999999974
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.35 E-value=0.53 Score=44.75 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 99999864
No 441
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.29 E-value=0.68 Score=44.33 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|+|||+|-+|..+|.+|++.|.+|.|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998874
No 442
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=86.23 E-value=1.5 Score=44.56 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.2
Q ss_pred eEeecCCcchHHHHHHHHHHHcCcEEEeCCceeEEEEecC--CCcEEEEEeCCCcEEEcCEEEE
Q 009247 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~~~p~gG~geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~--~g~~~gV~l~~G~~i~a~~VI~ 332 (539)
..||..-..++.+.|.+.++..|.+++++++|++|..+++ +++ +.|++.+| +++||+||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3567554568999999999999999999999999976410 233 56777666 799999985
No 443
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.01 E-value=0.57 Score=48.62 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=32.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 19 ~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
+.....|+|||+|-.|...|..|.++|.+|+|++++
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 344567999999999999999999999999999985
No 444
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.01 E-value=0.66 Score=45.81 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~ 54 (539)
...|.|||+|..|.++|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999997 89999986
No 445
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=85.98 E-value=1.4 Score=47.94 Aligned_cols=41 Identities=32% Similarity=0.340 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999998776554
No 446
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=85.91 E-value=1.4 Score=47.18 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=38.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
+.++||||||+|++||+||+.|+++|.+|+||||+...||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999998876644
No 447
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.90 E-value=1 Score=43.63 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=30.0
Q ss_pred CCcccEEEECCC---hhHHHHHHHHhhCCCeEEEeccCC
Q 009247 20 PTAFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGaG---l~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
+...-|+|.|++ --|..+|..|+++|.+|.+++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 334568999985 678999999999999999999874
No 448
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.88 E-value=0.71 Score=43.44 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~----~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999974
No 449
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=85.87 E-value=0.71 Score=45.38 Aligned_cols=44 Identities=16% Similarity=0.056 Sum_probs=30.2
Q ss_pred cCCCCCCCCCCCcccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 10 LPVPPYPPIEPTAFDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 10 ~~~~~~~~l~~~~~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
-|.++...+.+ ..|+|.| +|..|..++..|.+.|++|.++.++.
T Consensus 11 ~~~~~~~~~~~--~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 11 SSGLVPRGSHM--KKVFITGICGQIGSHIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp ----------C--CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCceeeecCCC--CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35556566654 3599998 69999999999999999999998874
No 450
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=85.87 E-value=0.54 Score=51.96 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=33.0
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
..|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799998 99999999999999999999999998 654
No 451
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.86 E-value=0.57 Score=44.93 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.|.+|.++.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999998874
No 452
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.84 E-value=0.58 Score=42.99 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.3
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|.| +|..|..++..|.++|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4699999 59999999999999999999999974
No 453
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.82 E-value=0.8 Score=44.94 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=34.3
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCeEEEeccC--------CCCCCcccc
Q 009247 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN--------PFYGSHFSS 63 (539)
Q Consensus 21 ~~~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~--------~~~GG~~~s 63 (539)
....|+|||+| +.|..+|..|.+.|.+|++++++ ..+++..++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~ 227 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH 227 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc
Confidence 44689999999 67999999999999999988664 556654443
No 454
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=85.81 E-value=1.6 Score=45.91 Aligned_cols=36 Identities=11% Similarity=0.255 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCeEEEeccCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~------------~G~~VlvlE~~~~ 56 (539)
..+||||||||++|+++|+.|++ .|.+|+|+|+++.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 35899999999999999999999 9999999999765
No 455
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=85.69 E-value=0.39 Score=54.85 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4699999999999999999999999999999998754
No 456
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.57 E-value=0.64 Score=44.10 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 53 (539)
.|.|||+|..|...|..|+++|++|.++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999876
No 457
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.52 E-value=0.6 Score=45.04 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++ |++|.+++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999998 68999999874
No 458
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.42 E-value=0.89 Score=44.23 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
..|+|||+|-.|..+|..|++.|. +|.|+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 999998873
No 459
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=85.42 E-value=1.3 Score=42.73 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=33.9
Q ss_pred cCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 10 ~~~~~~~~l~~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
++.+..+...+...-|+|.|+ |--|..+|..|+++|++|.++.++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 333333444444456888875 7889999999999999999998864
No 460
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=85.33 E-value=1.4 Score=47.70 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
+.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 346899999999999999999999999999999998776653
No 461
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=85.28 E-value=1 Score=48.28 Aligned_cols=42 Identities=21% Similarity=0.204 Sum_probs=37.4
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009247 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 18 l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 59 (539)
.+|.++||||||||++|+++|+.|+++|++|+|+|+++..++
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 356679999999999999999999999999999999976554
No 462
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.28 E-value=0.71 Score=46.58 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 463
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=85.23 E-value=1.7 Score=46.78 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~-~~G 58 (539)
.+|||||||||++|+.||.+|++.|.+|+++|++. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 46999999999999999999999999999999984 444
No 464
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.19 E-value=0.69 Score=42.33 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.8
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|+|.| +|..|..++..|.++|++|.++.++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 89999999999999999999999875
No 465
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.95 E-value=0.84 Score=44.88 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
...|.|||+|-.|+.+|..|+..|. .|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999874
No 466
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.90 E-value=0.61 Score=44.97 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 54
No 467
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.88 E-value=1.3 Score=41.96 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=30.1
Q ss_pred CcccEEEECC-Ch-hHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGT-GL-PESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGa-Gl-~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...-|+|.|+ |- -|..+|..|+++|++|++++++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3456999998 74 89999999999999999998874
No 468
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.83 E-value=0.78 Score=46.20 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 55 (539)
.+..|||+|+|-+|..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 44679999999999999999999998 999999984
No 469
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.72 E-value=1.1 Score=49.49 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
-.|.|||+|..|.-.|..++++|++|+++|.++.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 4799999999999999999999999999998764
No 470
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.71 E-value=0.79 Score=46.06 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 54 (539)
.+..|+|+|+|-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 44679999999999999999999998 89999998
No 471
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.63 E-value=0.7 Score=44.37 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|+|||+|-.|...|..|++.|.+|.+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999873
No 472
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.44 E-value=0.73 Score=53.02 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-eEEEeccCCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~ 56 (539)
.|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999995 8999999873
No 473
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.35 E-value=0.81 Score=47.39 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|..|..+|..|++.|.+|.+++++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 469999999999999999999999999998863
No 474
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.15 E-value=0.88 Score=44.24 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34569999999999999999999999999999874
No 475
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=84.06 E-value=0.75 Score=50.45 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.3
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCCcc
Q 009247 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (539)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 4599999 99999999999999999999999999876654
No 476
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.95 E-value=1.1 Score=42.58 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.|+|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 477
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.90 E-value=0.79 Score=44.52 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|.++|..|++.|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 999999875
No 478
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.85 E-value=0.91 Score=47.15 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..-|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4569999999999999999999999999999874
No 479
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=83.52 E-value=0.79 Score=42.58 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=30.0
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCC-CeEEEeccCC
Q 009247 23 FDLIVIG-TGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIG-aGl~Gl~aA~~La~~G-~~VlvlE~~~ 55 (539)
..|+|.| +|..|..+|..|+++| ++|.++.++.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 4699999 6999999999999999 8999999874
No 480
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=83.50 E-value=1.1 Score=44.01 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=30.7
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|+|.|+ |.-|..++..|+++|++|.++.++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 45899997 99999999999999999999998754
No 481
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.48 E-value=1.1 Score=42.33 Aligned_cols=37 Identities=11% Similarity=0.002 Sum_probs=30.4
Q ss_pred CCCcccEEEECC---ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 19 EPTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 19 ~~~~~DViIIGa---Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.....-|+|.|+ |--|..+|..|++.|.+|.++.++.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 334456999996 4679999999999999999998873
No 482
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.47 E-value=0.88 Score=45.61 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=28.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009247 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 18 l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
+...++.|+|+|+|..|..+|.+|++ .++|.+.+++
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~ 47 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVN 47 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcC
Confidence 44456789999999999999999986 4789988765
No 483
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=83.41 E-value=2 Score=41.20 Aligned_cols=53 Identities=8% Similarity=0.050 Sum_probs=40.8
Q ss_pred cchHHHHHHHHHHH-cCcEEEeCCceeEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEE
Q 009247 278 QGELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVL 332 (539)
Q Consensus 278 ~geL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---------~G-----~~i~a~~VI~ 332 (539)
..++.+.+.+.+.. .|.++++++.|++|..+ ++++.+|++. +| .+++||.||.
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 35677777776665 69999999999999876 6777777753 32 5789999995
No 484
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.39 E-value=1.1 Score=43.30 Aligned_cols=32 Identities=6% Similarity=0.236 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.| +|.+++++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998863
No 485
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.39 E-value=1 Score=43.71 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999874
No 486
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.35 E-value=1.8 Score=42.83 Aligned_cols=36 Identities=17% Similarity=0.106 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
....|.|||.|..|...|..|+..|.+|++++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 345699999999999999999999999999998764
No 487
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=83.35 E-value=1.2 Score=44.70 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCceeEEEEecCCCcEEEEEe-CCCc--EEEcCEEEE
Q 009247 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l-~~G~--~i~a~~VI~ 332 (539)
.++.+.|.+.+...|++++++++|++|..+ ++..+.|++ .+|+ +++||.||.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAG 157 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEE
Confidence 467788888888889999999999999764 222235666 6887 799999994
No 488
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.26 E-value=0.91 Score=44.54 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|..+|..|++.|. .|.++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999997 899999986
No 489
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.17 E-value=1.1 Score=44.48 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 22 AFDLIVIGT-GLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 22 ~~DViIIGa-Gl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
...|.|||+ |..|+++|..|+..|. +|.++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 457999998 9999999999999995 899999863
No 490
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=82.96 E-value=1.2 Score=44.92 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 57 (539)
..++|+|+|..+..+|..++..|++|+|+|.++.+
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 57999999999999999999999999999998754
No 491
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.95 E-value=0.97 Score=48.20 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..++|||.|-.|..+|..|.+.|++|+++|++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999999999975
No 492
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=82.89 E-value=1.9 Score=46.54 Aligned_cols=35 Identities=34% Similarity=0.498 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
.+|||||||||++|+.||.+|++.|.+|+++|++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 46999999999999999999999999999999984
No 493
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=82.88 E-value=1.1 Score=43.31 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=31.3
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
..|+|.|+ |..|..++..|.+.|++|.++.++..
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 46999998 99999999999999999999998765
No 494
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=82.87 E-value=1.1 Score=44.34 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.9
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 20 PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
|....|+|+|| |..|..++..|.+.|++|.++.|+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33457999998 9999999999999999999999976
No 495
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.48 E-value=0.24 Score=45.27 Aligned_cols=46 Identities=22% Similarity=0.205 Sum_probs=35.7
Q ss_pred ccCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 9 ~~~~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.+|.....+ .....|.|||+|-.|...|..|+++|++|.+++++..
T Consensus 8 ~~~~~~~~~--~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 8 EFPLTVDSS--EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 445443333 2335699999999999999999999999999988754
No 496
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=82.76 E-value=1.6 Score=42.33 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=30.9
Q ss_pred CCcccEEEECCC-hhHHHHHHHHhhCCCeEEEeccC
Q 009247 20 PTAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 20 ~~~~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~ 54 (539)
.....|+|||+| +.|.-+|..|.+.|.+|+++.++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 345689999999 68999999999999999999755
No 497
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=82.70 E-value=1.6 Score=43.12 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 55 (539)
....|.|||.|..|...|..|+..|.+|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34579999999999999999999999999999875
No 498
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=82.58 E-value=1.1 Score=44.80 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=30.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.|+|.|+ |.-|..++..|.+.|++|.++.++..
T Consensus 30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 6999997 99999999999999999999998754
No 499
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=82.57 E-value=1.1 Score=44.21 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=31.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009247 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 21 ~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 55 (539)
....|.|||+|..|.++|..|+..|. .+.++|.+.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34579999999999999999999998 899999863
No 500
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=82.55 E-value=1.7 Score=42.00 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=36.9
Q ss_pred ccCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009247 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 9 ~~~~~~~~~l~~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 56 (539)
.|...++..+. ...|.|||.|..|...|..|+..|.+|+.++++..
T Consensus 111 ~w~~~~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 156 (290)
T 3gvx_A 111 IFRQSPTTLLY--GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSV 156 (290)
T ss_dssp CCCCCCCCCCT--TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred ccccCCceeee--cchheeeccCchhHHHHHHHHhhCcEEEEEecccc
Confidence 46544443443 34699999999999999999999999999998754
Done!