BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009248
(539 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224065999|ref|XP_002301995.1| predicted protein [Populus trichocarpa]
gi|222843721|gb|EEE81268.1| predicted protein [Populus trichocarpa]
Length = 550
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/530 (80%), Positives = 465/530 (87%), Gaps = 14/530 (2%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
LLFCG+TCWD +GR+KGA +GNLVSPTRLRPLVGV+IRFVA+G SCHCVA+DVEGRCYT
Sbjct: 23 LLFCGATCWDIIGRKKGAQEGNLVSPTRLRPLVGVNIRFVASGSASCHCVALDVEGRCYT 82
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WGRNERGQLGHGD IQRDRPT+VSELSKYK+ KAGAGRSHTVVVTEDG SLAFGWNKHGQ
Sbjct: 83 WGRNERGQLGHGDTIQRDRPTVVSELSKYKLIKAGAGRSHTVVVTEDGLSLAFGWNKHGQ 142
Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
LGSGS RNEIE SPVRCLVS+V TACGADFTVWLSSVEGASIL+AGLPQYGQLGHGTDN
Sbjct: 143 LGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSVEGASILSAGLPQYGQLGHGTDN 202
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
EYNTKDSSV+LAYEAQPRPRA+ ALA ETIVKVACGTNHTVAVDS GYVYTWGFGGYGRL
Sbjct: 203 EYNTKDSSVRLAYEAQPRPRALTALARETIVKVACGTNHTVAVDSNGYVYTWGFGGYGRL 262
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
GHREQKDEWVPRRVDVF ++NVLPP+AVISAGSVNS+CTAGGGQLYMWGK+KN GDDWMY
Sbjct: 263 GHREQKDEWVPRRVDVFSKHNVLPPDAVISAGSVNSACTAGGGQLYMWGKIKNTGDDWMY 322
Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
PKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWGHAQ GELGYGP GQKSSA+PKKVDIL
Sbjct: 323 PKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHAQNGELGYGPSGQKSSAVPKKVDIL 382
Query: 382 EGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDN---EEIDRNSTVP---- 434
EGMHVI VACG GHS+VIVDR NVG++LDQLDVYDGKAS + ++I+ S P
Sbjct: 383 EGMHVIGVACGMGHSMVIVDRMNVGDQLDQLDVYDGKASGEAKGFPKDINEGSGEPERKN 442
Query: 435 -----PKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGK 489
KKGAAK S+NS+KR KSKDSS E E+EEN D ESD SE+Q NGQ+E+K + GGK
Sbjct: 443 PVKQSAKKGAAKASDNSRKR-KSKDSS-ESEDEENGDDESDASEDQVNGQTEKKSKRGGK 500
Query: 490 ASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRPRKS 539
SGRG+ K K + DGK TGRGRGRP S NKS+ S Q K GKRGRPRKS
Sbjct: 501 VSGRGQSKGGKKSTSDGKSTGRGRGRPLSGNKSTVSSQEKAGKRGRPRKS 550
>gi|302142613|emb|CBI19816.3| unnamed protein product [Vitis vinifera]
Length = 542
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/542 (77%), Positives = 470/542 (86%), Gaps = 7/542 (1%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
A +E+E VEE+ EKGGELL CGSTCWDA+GRRKG L+GNLVSPTRLRPLVGVDIRFV
Sbjct: 3 AAVESENKVEEKK-SEKGGELLLCGSTCWDAIGRRKGTLEGNLVSPTRLRPLVGVDIRFV 61
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
AAGC SCHCVA+DVEGRCYTWGRNERGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH
Sbjct: 62 AAGCASCHCVALDVEGRCYTWGRNERGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSH 121
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
+VVV+EDG SLAFGWNKHGQLGSGS++NE+E SPVRCLVSEV ACGA+FTVWLSS EG
Sbjct: 122 SVVVSEDGQSLAFGWNKHGQLGSGSVKNEVELSPVRCLVSEVKTVACGAEFTVWLSSAEG 181
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
ASIL AGLPQYGQLGHGTDNEYN+KDSSV+LAYE QPRP+AIA+L+GETIVKVACGTNHT
Sbjct: 182 ASILTAGLPQYGQLGHGTDNEYNSKDSSVRLAYEPQPRPKAIASLSGETIVKVACGTNHT 241
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
VAVDS G+VYTWGFGGYGRLGHREQKDEWVPRRV+VFQR NVLPPEAVISAGSVNSSCTA
Sbjct: 242 VAVDSSGHVYTWGFGGYGRLGHREQKDEWVPRRVEVFQRQNVLPPEAVISAGSVNSSCTA 301
Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
GGGQLYMWGK+K GDDWMYPKPLMDLSGW+L CMDSGNMHHFVGADSSCISWGHAQYGE
Sbjct: 302 GGGQLYMWGKIKITGDDWMYPKPLMDLSGWHLNCMDSGNMHHFVGADSSCISWGHAQYGE 361
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASS 421
LGYGP GQKSSA+PKKVDILEGMHVI+VACG+G+S+V+VDRTNVG+RLDQLD+YDGKA+
Sbjct: 362 LGYGPNGQKSSAVPKKVDILEGMHVITVACGFGNSMVVVDRTNVGDRLDQLDIYDGKAAG 421
Query: 422 QDNEEIDRNSTVP--PKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYE---SDDSEEQA 476
+ +EE + + VP K A + S+ KK K S E + E DYE SDDSE +
Sbjct: 422 EGSEEPESLNAVPKKTTKKGAAAAKASENSKKRKKSKESSDSESEEDYEDNDSDDSEVEV 481
Query: 477 NGQSERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRP 536
NG++E+K+Q GGKASGRGRGK A K + K +GRGRGRP + K+ Q QGK GKRGRP
Sbjct: 482 NGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPLAVEKTLQHSQGK-GKRGRP 540
Query: 537 RK 538
RK
Sbjct: 541 RK 542
>gi|224082962|ref|XP_002306909.1| predicted protein [Populus trichocarpa]
gi|222856358|gb|EEE93905.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/542 (78%), Positives = 469/542 (86%), Gaps = 6/542 (1%)
Query: 1 MAELEAEKMVEEETG-KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR 59
M+ +EAEK EET +EKGGELLFCG+TCW+ VGR+KGA +GNLVSP+RLRPLVGVDIR
Sbjct: 1 MSAVEAEKKAAEETKVEEKGGELLFCGATCWNVVGRKKGAQEGNLVSPSRLRPLVGVDIR 60
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA+G SCHCVA+DVEGRCYTWGRNERGQLGHGD IQRDRPT+VSELSKYK+ +AGAGR
Sbjct: 61 VVASGSASCHCVALDVEGRCYTWGRNERGQLGHGDTIQRDRPTVVSELSKYKLIRAGAGR 120
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
SH+VVVTEDG SLAFGWNKHGQLGSGS RNEIE SPVRCLVS+V TACGADFTVWLSSV
Sbjct: 121 SHSVVVTEDGLSLAFGWNKHGQLGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSV 180
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
EGASIL+AGLPQYGQLGHGTD EYNTKDSSV+LAYEAQPRPRAIA+LAGETIVKVACGTN
Sbjct: 181 EGASILSAGLPQYGQLGHGTDKEYNTKDSSVRLAYEAQPRPRAIASLAGETIVKVACGTN 240
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
HTVAVDS GYVYTWGFGGYGRLGHREQKDEWVPRRVD+F ++NVLPP AVISAGSV+S+C
Sbjct: 241 HTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDIFTKHNVLPPGAVISAGSVSSAC 300
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
TAGGGQLYMWGK+KN GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWG+A
Sbjct: 301 TAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGYALN 360
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKA 419
GELGYGP GQKSSA+PKKVDILEGMHVI VACG GHS+VIVDRTNVG+ LDQLDVYDGKA
Sbjct: 361 GELGYGPNGQKSSAVPKKVDILEGMHVIGVACGTGHSMVIVDRTNVGDGLDQLDVYDGKA 420
Query: 420 SSQDNEEIDRNSTVPP--KKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQAN 477
S + + E V KKGAAK ++ S+KR KSKD+SE EEE N + ++ D +Q N
Sbjct: 421 SDEGSGEPGSKDHVKQSGKKGAAKATDKSRKR-KSKDASESEEENSNDESDASD--DQVN 477
Query: 478 GQSERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRPR 537
GQ+E+K GGK SG G+ + K S GK TGRG+GRP S NKS+ S KTGKRGRPR
Sbjct: 478 GQTEKKSIRGGKVSGTGQSRGGKKSSSAGKSTGRGQGRPPSANKSTNSSLEKTGKRGRPR 537
Query: 538 KS 539
KS
Sbjct: 538 KS 539
>gi|225458061|ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinifera]
Length = 548
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/548 (76%), Positives = 470/548 (85%), Gaps = 13/548 (2%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
A +E+E VEE+ EKGGELL CGSTCWDA+GRRKG L+GNLVSPTRLRPLVGVDIRFV
Sbjct: 3 AAVESENKVEEKK-SEKGGELLLCGSTCWDAIGRRKGTLEGNLVSPTRLRPLVGVDIRFV 61
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
AAGC SCHCVA+DVEGRCYTWGRNERGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH
Sbjct: 62 AAGCASCHCVALDVEGRCYTWGRNERGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSH 121
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRN------EIEPSPVRCLVSEVTATACGADFTVW 175
+VVV+EDG SLAFGWNKHGQLGSGS++N ++E SPVRCLVSEV ACGA+FTVW
Sbjct: 122 SVVVSEDGQSLAFGWNKHGQLGSGSVKNGRFNFLKVELSPVRCLVSEVKTVACGAEFTVW 181
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LSS EGASIL AGLPQYGQLGHGTDNEYN+KDSSV+LAYE QPRP+AIA+L+GETIVKVA
Sbjct: 182 LSSAEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLAYEPQPRPKAIASLSGETIVKVA 241
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CGTNHTVAVDS G+VYTWGFGGYGRLGHREQKDEWVPRRV+VFQR NVLPPEAVISAGSV
Sbjct: 242 CGTNHTVAVDSSGHVYTWGFGGYGRLGHREQKDEWVPRRVEVFQRQNVLPPEAVISAGSV 301
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
NSSCTAGGGQLYMWGK+K GDDWMYPKPLMDLSGW+L CMDSGNMHHFVGADSSCISWG
Sbjct: 302 NSSCTAGGGQLYMWGKIKITGDDWMYPKPLMDLSGWHLNCMDSGNMHHFVGADSSCISWG 361
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVY 415
HAQYGELGYGP GQKSSA+PKKVDILEGMHVI+VACG+G+S+V+VDRTNVG+RLDQLD+Y
Sbjct: 362 HAQYGELGYGPNGQKSSAVPKKVDILEGMHVITVACGFGNSMVVVDRTNVGDRLDQLDIY 421
Query: 416 DGKASSQDNEEIDRNSTVP--PKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYE---SD 470
DGKA+ + +EE + + VP K A + S+ KK K S E + E DYE SD
Sbjct: 422 DGKAAGEGSEEPESLNAVPKKTTKKGAAAAKASENSKKRKKSKESSDSESEEDYEDNDSD 481
Query: 471 DSEEQANGQSERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKT 530
DSE + NG++E+K+Q GGKASGRGRGK A K + K +GRGRGRP + K+ Q QGK
Sbjct: 482 DSEVEVNGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPLAVEKTLQHSQGK- 540
Query: 531 GKRGRPRK 538
GKRGRPRK
Sbjct: 541 GKRGRPRK 548
>gi|356509755|ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]
Length = 538
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/520 (76%), Positives = 444/520 (85%), Gaps = 7/520 (1%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
LLFCG+TCWD +GRRKG +DGNLVSP+RLRPLVGVDIR+VA+GCVSCHCVA+DVEGRCYT
Sbjct: 24 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVASGCVSCHCVALDVEGRCYT 83
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WGRNE+GQLGHGD IQRDRPT+VSELSKYKI KAG+GRSHTVVVT+DGNSLAFGWNKHGQ
Sbjct: 84 WGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSGRSHTVVVTDDGNSLAFGWNKHGQ 143
Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
LGSGS+RNEIE SPVRCLVSEV TACG DFTVWLSS+EGASIL AGLPQYGQLGHGTDN
Sbjct: 144 LGSGSVRNEIESSPVRCLVSEVKHTACGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDN 203
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
EYN+KDSSV+L YE QPRPRAIAALAGE IVKVACGTNHTVAVD G+VYTWGFGGYGRL
Sbjct: 204 EYNSKDSSVRLVYEPQPRPRAIAALAGEAIVKVACGTNHTVAVDKNGFVYTWGFGGYGRL 263
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
GHREQKDEWVPRRV+VFQ NVLPP+A+ISAGSVNSSCTAGGGQLYMWGKLKN GDDWMY
Sbjct: 264 GHREQKDEWVPRRVEVFQNRNVLPPDAIISAGSVNSSCTAGGGQLYMWGKLKNTGDDWMY 323
Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
PKPLMDLSGWNL CMDSGNMHHFVGADSSCISWGHAQ GELGYGP GQKSSA+PKKVD+L
Sbjct: 324 PKPLMDLSGWNLLCMDSGNMHHFVGADSSCISWGHAQNGELGYGPTGQKSSAVPKKVDLL 383
Query: 382 EGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAK 441
EGMHVISVACG GHS+VIVDR NV +RLDQLD+YDGKA + NE + N+T PK+ A K
Sbjct: 384 EGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGKAVGEGNEAV--NTTPVPKQAAKK 441
Query: 442 VSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGKASGRGRGKAANK 501
+ + KK K S + + +E+++ +DSE+Q NG++E K+ G SG+GRGK K
Sbjct: 442 GAKGADNSKKRKQSKDSSDSDEDAEESEEDSEDQINGEAEAKRPRG---SGKGRGKTPKK 498
Query: 502 LSGDGK-GTGRGRGRPTSTNK-SSQSVQGKTGKRGRPRKS 539
GK T+ NK SS+S Q K+GKRGRPRKS
Sbjct: 499 SGAKGKGSVSGRGRGGTAANKNSSKSPQVKSGKRGRPRKS 538
>gi|356518146|ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]
Length = 548
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/535 (77%), Positives = 458/535 (85%), Gaps = 21/535 (3%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GGELLFCG+TCWD +GRRKGA+DGNLVSP+RLRPLVGVDIR+VA+GCVSCHCVA+DVEGR
Sbjct: 21 GGELLFCGATCWDIIGRRKGAVDGNLVSPSRLRPLVGVDIRYVASGCVSCHCVALDVEGR 80
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
CYTWGRNE+GQLGHGD IQRDRPT+VSELSKYKI KAG+GRSHTVVVTEDGNSLAFGWNK
Sbjct: 81 CYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSGRSHTVVVTEDGNSLAFGWNK 140
Query: 139 HGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
HGQLGSGS+RN +IE SPVRCLVS+V TACG DFTVWLSSVEGASIL AGLPQYG
Sbjct: 141 HGQLGSGSVRNGMLVFKIESSPVRCLVSDVKHTACGGDFTVWLSSVEGASILTAGLPQYG 200
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLGHGTDNEYN+KDSSV+L YE QPRPRAIAALAGETIVKVACGTNHTVAVD G+VYTW
Sbjct: 201 QLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGETIVKVACGTNHTVAVDKNGFVYTW 260
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
GFGGYGRLGHREQKDEWVPRRV+VFQ NVLPP++VISAGSVNSSCTAGGGQLYMWGKLK
Sbjct: 261 GFGGYGRLGHREQKDEWVPRRVEVFQNRNVLPPDSVISAGSVNSSCTAGGGQLYMWGKLK 320
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
N GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG AQ GELGYGP GQKSSA
Sbjct: 321 NTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGLAQNGELGYGPTGQKSSA 380
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTV 433
+PKKVD+LEGMHVISVACG GHS+VIVDR NV +RLDQLD+YDGKA + NE + N+T
Sbjct: 381 VPKKVDLLEGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGKAVGEGNEAV--NTTP 438
Query: 434 PPKK----GAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGK 489
PK+ GA ++NSKKRK+ KDSSE EEEE+ ES+DSE++ NG+ E K+ +
Sbjct: 439 VPKQAAKKGAKGAADNSKKRKQLKDSSESEEEEDAE--ESEDSEDEINGEVEAKRP---R 493
Query: 490 ASGRGR-----GKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRPRKS 539
+SG+GR A KG+GRGRG + SS+S Q KTGKRGRPRKS
Sbjct: 494 SSGKGRGKAPKKAGAKGKGAKEKGSGRGRGGTAANKSSSKSPQVKTGKRGRPRKS 548
>gi|255538862|ref|XP_002510496.1| Protein RCC2, putative [Ricinus communis]
gi|223551197|gb|EEF52683.1| Protein RCC2, putative [Ricinus communis]
Length = 529
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/544 (74%), Positives = 456/544 (83%), Gaps = 20/544 (3%)
Query: 1 MAELEAEKMVEEE---TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD 57
M+ +E +K +EE EKGGELLFCG+TCWD +GR+KGA +GNL+SPTRLRPLVGVD
Sbjct: 1 MSAVEEDKKGDEENEVAAAEKGGELLFCGATCWDIIGRKKGAQEGNLISPTRLRPLVGVD 60
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IRFVA+GC SCHCVA+DVEGRCYTWGRNE+GQLGHGD+IQRDRPT+VSELSKYKI +AGA
Sbjct: 61 IRFVASGCSSCHCVALDVEGRCYTWGRNEKGQLGHGDRIQRDRPTVVSELSKYKIIRAGA 120
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
GRSHTVVVTEDG SLAFGWNKHGQLGSGS ++E+E SPVRCLVS+V TACGA+FTVWLS
Sbjct: 121 GRSHTVVVTEDGLSLAFGWNKHGQLGSGSAKSEVESSPVRCLVSDVKNTACGAEFTVWLS 180
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
SVEGASIL AGLPQYGQLGHGTDNEYNTKDSSV+LAYEAQPRPRAIA+L+GETIVKVACG
Sbjct: 181 SVEGASILTAGLPQYGQLGHGTDNEYNTKDSSVRLAYEAQPRPRAIASLSGETIVKVACG 240
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
TNHTVAVDS GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR+NVLPP+AV+SAGSVNS
Sbjct: 241 TNHTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRHNVLPPDAVVSAGSVNS 300
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
SCTAGGGQLYMWGK+KN GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWGHA
Sbjct: 301 SCTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHA 360
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDG 417
QYGELGYGP QKSSA+PKKVDILEGMHVI VACG GHS+VIVDR NV RL+QLD+YDG
Sbjct: 361 QYGELGYGPNAQKSSAVPKKVDILEGMHVIGVACGMGHSMVIVDRANVDNRLEQLDIYDG 420
Query: 418 KASSQDNEEIDR--NSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQ 475
KAS + +EE + + K AA S+N+ K++K S E EEEE SD ES++SE Q
Sbjct: 421 KASGEGSEEPENKAPAAKQNAKKAAARSSNNSKKRKKSKDSSESEEEEISDDESENSEGQ 480
Query: 476 ANGQSERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGR 535
NGQ + K RG + G G+ T +TN+S+ S Q K GKRGR
Sbjct: 481 VNGQMRKGK--------RGEKASGGAGRGRGRST-------PATNRSTNSSQAKGGKRGR 525
Query: 536 PRKS 539
PRK+
Sbjct: 526 PRKT 529
>gi|449460213|ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sativus]
Length = 543
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/528 (75%), Positives = 452/528 (85%), Gaps = 13/528 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GELLFCG+T WD +GR+KG ++GNLVSPTRLRPLVG+DIRFVA+GC SCHCVA+DVEGRC
Sbjct: 21 GELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVASGCTSCHCVALDVEGRC 80
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWGRNE+GQLGHGD IQRDRPTIVS+LSKYK+ KAGAGR+HTVVVTEDGNSL+FGWNKH
Sbjct: 81 YTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKH 140
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
GQLGSGSI+NEIE SPVRCLVSEV TACG +FT WL+S+EGASIL AGLPQYGQLGHGT
Sbjct: 141 GQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFTAWLTSIEGASILTAGLPQYGQLGHGT 200
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
DNEYNTKDSSV+LAYEAQPRPRAIA+LAGE IVKVACGTNHTVAVDS G+VYTWGFGGYG
Sbjct: 201 DNEYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYG 260
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
RLGH+EQKDEW PRRVD+FQR N LPP+A+ISAGSVNSSCTAGGGQLYMWGK+KN GDDW
Sbjct: 261 RLGHKEQKDEWAPRRVDIFQRRNTLPPDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDW 320
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
MYPKPLMDLSGWN+RCMDSGNMHHFVGAD+SCISWGHAQYGELGYGP GQKSSA+PKKVD
Sbjct: 321 MYPKPLMDLSGWNIRCMDSGNMHHFVGADNSCISWGHAQYGELGYGPMGQKSSALPKKVD 380
Query: 380 ILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGA 439
ILE MHVISVACG GHS+V+VDRTNV +RLDQLD++DGKA + N ++ VP KG+
Sbjct: 381 ILENMHVISVACGAGHSMVVVDRTNVADRLDQLDIHDGKAFDEVNVVLE---AVPQSKGS 437
Query: 440 A-------KVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGKASG 492
A ++ K++K S + EEEE + + D S+E+ANG S+ +Q G K+
Sbjct: 438 AIKPSSKAAKASLKAKKRKKSKDSSDSEEEEEENEDGDSSDEEANGLSDTSEQYGSKS-- 495
Query: 493 RGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTG-KRGRPRKS 539
+GRGK + K S GKG+GRGRGRP S NK + QGK G KRGRPRK+
Sbjct: 496 KGRGKGSKKPSSGGKGSGRGRGRPPSNNKKPAASQGKAGAKRGRPRKT 543
>gi|30686578|ref|NP_173417.2| regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
gi|332191788|gb|AEE29909.1| regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
Length = 538
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/548 (68%), Positives = 436/548 (79%), Gaps = 19/548 (3%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MAE ++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1 MAEAMNSSEKKDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61 VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
HTVVV++DG SL FGWNK+GQLG GS +N E+E +P+ C+VS EVT ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACGTNHTVAVD GYVYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGS 300
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 301 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 360
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDV 414
GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+QL+V
Sbjct: 361 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQLEV 420
Query: 415 YDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDS--SEEEEEEENSDYESDDS 472
YDGK S +++ E + T+ PK+ A SKKRK SK S SE++ +E+NSD E +
Sbjct: 421 YDGKGSLEESVEEVKEETLAPKQQAVTKRGASKKRKASKASSDSEQDSDEDNSDKEKEVQ 480
Query: 473 EEQANGQ-SERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTG 531
A+ SE ++A GK G G T G+ P T G
Sbjct: 481 GSDADSDYSEDGEEANGKKQSARGRGRGRGARGRGGRTSNGKAPPVKTG----------G 530
Query: 532 KRGRPRKS 539
+RGRPRKS
Sbjct: 531 RRGRPRKS 538
>gi|297850394|ref|XP_002893078.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338920|gb|EFH69337.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/536 (70%), Positives = 437/536 (81%), Gaps = 19/536 (3%)
Query: 11 EEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRFVA+GC S HC
Sbjct: 11 KDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVASGCASFHC 70
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
VA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGRSHTVVV++DG
Sbjct: 71 VALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRSHTVVVSDDGL 130
Query: 131 SLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
SLAFGWNK+GQLGSGS +N E+E +P+ C+VS EVT ACGADFTVWLSS EGASI
Sbjct: 131 SLAFGWNKYGQLGSGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASI 190
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
L AGLPQYGQLGHGTDNE+N KDSSVKLAYEAQPRP+AIA+LAGETIVKVACGTNHTVAV
Sbjct: 191 LTAGLPQYGQLGHGTDNEFNMKDSSVKLAYEAQPRPKAIASLAGETIVKVACGTNHTVAV 250
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
D G+VYTWG+GGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS NS+CTAGGG
Sbjct: 251 DKNGFVYTWGYGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAIVSAGSANSACTAGGG 310
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
QLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISWGHAQYGELGY
Sbjct: 311 QLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISWGHAQYGELGY 370
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDN 424
GP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+QL++YDGK S +++
Sbjct: 371 GPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQLEIYDGKGSLEES 430
Query: 425 EEIDRNSTVPPKKGAAKVSNNSKKRKKSKDS-SEEEEEEENSDYESDDSEEQANGQ-SER 482
E + T+ PK+ AAK SKKRK SK S SE++ +E+NSD E + A+ SE
Sbjct: 431 VEEVKEETLAPKQQAAK-RGASKKRKTSKASDSEQDSDEDNSDKEKEVQGSDADSDYSED 489
Query: 483 KKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRPRK 538
++A GK G G T G+ P T G+RGRPRK
Sbjct: 490 GEEANGKKQSARGRGRGRGARGRGGRTSNGKAPPVKTG----------GRRGRPRK 535
>gi|22531040|gb|AAM97024.1| unknown protein [Arabidopsis thaliana]
gi|23197984|gb|AAN15519.1| unknown protein [Arabidopsis thaliana]
Length = 538
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/548 (68%), Positives = 435/548 (79%), Gaps = 19/548 (3%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MAE ++E+ +EKG ELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1 MAEAMNSSEKKDESSEEKGSELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61 VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
HTVVV++DG SL FGWNK+GQLG GS +N E+E +P+ C+VS EVT ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACGTNHTVAVD GYVYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGS 300
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 301 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 360
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDV 414
GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+QL+V
Sbjct: 361 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQLEV 420
Query: 415 YDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDS--SEEEEEEENSDYESDDS 472
YDGK S +++ E + T+ PK+ A SKKRK SK S SE++ +E+NSD E +
Sbjct: 421 YDGKGSLEESVEEVKEETLAPKQQAVTKRGASKKRKASKASSDSEQDSDEDNSDKEKEVQ 480
Query: 473 EEQANGQ-SERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTG 531
A+ SE ++A GK G G T G+ P T G
Sbjct: 481 GSDADSDYSEDGEEANGKKQSARGRGRGRGARGRGGRTSNGKAPPVKTG----------G 530
Query: 532 KRGRPRKS 539
+RGRPRKS
Sbjct: 531 RRGRPRKS 538
>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
Length = 537
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/539 (69%), Positives = 434/539 (80%), Gaps = 28/539 (5%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MA + ++E+ +EKGGELLFCG+T WD VGRRKG ++GNL+SPTRLRPL+GV+IRF
Sbjct: 1 MAATNSTLEKKDESSEEKGGELLFCGATSWDIVGRRKG-VEGNLLSPTRLRPLLGVNIRF 59
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA+GC SCHCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSKYKI KAGAGR+
Sbjct: 60 VASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKYKIVKAGAGRN 119
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
HTVVV+++G S AFGWNKHGQLG G+ +N E+E SPV C+VS EVT+ ACGADFTV
Sbjct: 120 HTVVVSDEGRSFAFGWNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTV 179
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
WLSS EGASIL AGLPQYGQLGHGTDNE+N KD SVKLAYEAQPRP+AIA+LAGETIVKV
Sbjct: 180 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGETIVKV 239
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG NHTVAVD G+VYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 240 ACGANHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNVLPPNAIVSAGS 299
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 300 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 359
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT-NVGERLDQLD 413
GHAQYGELGYGP+GQKSSA PKKVDILEGMHV+ VACG+ HS+VIVDRT ++ +RL+QL+
Sbjct: 360 GHAQYGELGYGPHGQKSSAAPKKVDILEGMHVMGVACGFCHSMVIVDRTEDIADRLEQLE 419
Query: 414 VYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEE--EENSDYE--- 468
+YDGK S ++ E + TV + +KRK +K SS+ E++ EENSD E
Sbjct: 420 IYDGKGSLEETVEQPKEETVATTTKQQVPAKRGRKRKAAKASSDSEQDSGEENSDKEKEA 479
Query: 469 -------SDDSEEQANGQSERKKQAGGKASGRGRGKAANKLSGDGKG----TGRGRGRP 516
S+D EE+ANG KKQ G+ +G+GK TGRGRGRP
Sbjct: 480 KGSDSDYSEDGEEEANG----KKQTTRGRGRGRGGRGRGGRTGNGKASPVKTGRGRGRP 534
>gi|212721294|ref|NP_001132288.1| uncharacterized protein LOC100193728 [Zea mays]
gi|195624280|gb|ACG33970.1| protein RCC2 [Zea mays]
gi|413919836|gb|AFW59768.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 549
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/523 (68%), Positives = 423/523 (80%), Gaps = 7/523 (1%)
Query: 19 GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
G ELL+CG T +DA+GR+ G GNLVSPTRLRPLVGVDIRFVA+GC +CHCVA+D G
Sbjct: 31 GWELLYCGGTSFDAMGRKVVGGAQGNLVSPTRLRPLVGVDIRFVASGCTACHCVALDAGG 90
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+CYTWGRNE+GQLGHGD + R+ PT+VS+LSKYKI KA GR+HTVVVT+DG SL+FG N
Sbjct: 91 KCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKACVGRNHTVVVTDDGKSLSFGHN 150
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
KHGQLG+GS+RNEIE SPV C+V+E T ACGADFT WLSSVEG+SIL AGLPQYGQLGH
Sbjct: 151 KHGQLGTGSLRNEIESSPVSCIVAEATNVACGADFTAWLSSVEGSSILTAGLPQYGQLGH 210
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GTDNEYN K+SSVKL YE QPRPRAIAA +G+T+VKVACGTNHTVAVDS G+VYTWGFGG
Sbjct: 211 GTDNEYNAKESSVKLTYEPQPRPRAIAAFSGKTVVKVACGTNHTVAVDSNGFVYTWGFGG 270
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
YGRLGHREQKDEW PR V+VFQ++NVLPP A++SAGSV+S+CTAGGGQLYMWGK+KN GD
Sbjct: 271 YGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIVSAGSVSSACTAGGGQLYMWGKMKNTGD 330
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
DWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYGP GQKSSA PKK
Sbjct: 331 DWMYPKPVMDLSGWNIRCMASGNMHHIVGADDSCISWGVAQNGELGYGPNGQKSSANPKK 390
Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKK 437
VDILEGMHV SV CG+G SL++VDR NVG+RL QL++YDG + E+++ KK
Sbjct: 391 VDILEGMHVTSVGCGFGLSLIVVDRANVGDRLGQLEIYDGDTGA----EVEKVEVQVTKK 446
Query: 438 GAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGKASGRGRGK 497
+A ++ + KRKK+KD SE E EE++ D E + +++ G E K + G K + RGRG+
Sbjct: 447 ASASTNSRANKRKKTKDVSESESEEDDDDDEDESGDDENGGVEESKGRRGRKPANRGRGR 506
Query: 498 AANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKT--GKRGRPRK 538
K + + K +GRGRGRP T S+Q G + GKRGRPRK
Sbjct: 507 GGKKATPEAKPSGRGRGRPKKTESSAQKAGGTSGRGKRGRPRK 549
>gi|242074680|ref|XP_002447276.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
gi|241938459|gb|EES11604.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
Length = 552
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/514 (68%), Positives = 413/514 (80%), Gaps = 7/514 (1%)
Query: 12 EETGKEKGGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
E G G ELL+CG T +DA+GR+ G GNLVSPTRLRPLVGVDIRFVA+GC +CHC
Sbjct: 24 EAKGTGSGWELLYCGGTSFDAMGRKVVGGAQGNLVSPTRLRPLVGVDIRFVASGCTACHC 83
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
VA+D EG+CYTWGRNE+GQLGHGD + R+ PT+VS+LSKYKI KA GR+HTVVVT+DG
Sbjct: 84 VALDAEGKCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKASVGRNHTVVVTDDGK 143
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
S +FG NKHGQLG+GS+RNEIE SPV C+V+E T CGADFTVWLSSVEG+SIL AGLP
Sbjct: 144 SFSFGHNKHGQLGTGSLRNEIESSPVSCIVAEATNVVCGADFTVWLSSVEGSSILTAGLP 203
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
QYGQLGHGTDNEYN K+SSV+L Y+ QPRPRAIAA +G+T+VKVACGTNHTVAVDS G+V
Sbjct: 204 QYGQLGHGTDNEYNAKESSVRLTYDPQPRPRAIAAFSGKTVVKVACGTNHTVAVDSSGFV 263
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A++SAGS +S+CTAGGGQLYMWG
Sbjct: 264 YTWGFGGYGRLGHREQKDEWQPRIVEVFQKHNVLPPNAIVSAGSASSACTAGGGQLYMWG 323
Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
K+KN GDDWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYGP GQK
Sbjct: 324 KMKNTGDDWMYPKPVMDLSGWNIRCMASGNMHHVVGADDSCISWGVAQNGELGYGPNGQK 383
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRN 430
SSA PKKVDILEGMHV SV CG+G SL++VDR NVG+RLDQL++YDG S E+++
Sbjct: 384 SSANPKKVDILEGMHVTSVGCGFGLSLIVVDRANVGDRLDQLEIYDGDTS----PEVEKV 439
Query: 431 STVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGKA 490
KK +A ++ + KRKK+KD SE E EE++ + D+S + NG E K G+
Sbjct: 440 EVQVTKKASASTNSRANKRKKTKDVSESESEEDDD--DDDESGDDENGDIEEPKGRRGRK 497
Query: 491 SGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQ 524
RGRG+ A K + + K +GRGRGRP T +Q
Sbjct: 498 PSRGRGRGAKKATPEAKPSGRGRGRPKKTESPAQ 531
>gi|218195760|gb|EEC78187.1| hypothetical protein OsI_17792 [Oryza sativa Indica Group]
Length = 549
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/532 (67%), Positives = 420/532 (78%), Gaps = 19/532 (3%)
Query: 5 EAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPL 53
E EK+ G+EK GGELL+CG+T ++ +GR+ G GNLVSPTR+R L
Sbjct: 6 EPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRMRSL 65
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
+GVDIRFVA+GC +CHCVA+D EGRCYTWGRNE+GQLGHGD +QR+ PT+VSELSKYK+
Sbjct: 66 MGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELSKYKVI 125
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
KA GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T CGADFT
Sbjct: 126 KASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGADFT 185
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
VWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+TIVK
Sbjct: 186 VWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVK 245
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+ISAG
Sbjct: 246 AACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIISAG 305
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD SCIS
Sbjct: 306 AASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDSCIS 365
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLD 413
WG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+ +RL+QLD
Sbjct: 366 WGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLNQLD 425
Query: 414 VYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSE 473
+YDG S+ E DR KK +A + S KRKK+KD SE EE+++ E DDS+
Sbjct: 426 IYDGDTST---EVEDRVEVQVAKKASASTNARSNKRKKTKDVSESEEDDD----EEDDSD 478
Query: 474 EQANGQ-SERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQ 524
+ NG+ K + G K S RGRG+ A K + + K + RGRGRP T +Q
Sbjct: 479 DDENGEIKGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPAQ 530
>gi|115461118|ref|NP_001054159.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|113565730|dbj|BAF16073.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|222629715|gb|EEE61847.1| hypothetical protein OsJ_16512 [Oryza sativa Japonica Group]
Length = 549
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/532 (67%), Positives = 420/532 (78%), Gaps = 19/532 (3%)
Query: 5 EAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPL 53
E EK+ G+EK GGELL+CG+T ++ +GR+ G GNLVSPTR+R L
Sbjct: 6 EPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRMRSL 65
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
+GVDIRFVA+GC +CHCVA+D EGRCYTWGRNE+GQLGHGD +QR+ PT+VSELSKYK+
Sbjct: 66 MGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELSKYKVI 125
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
KA GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T CGADFT
Sbjct: 126 KASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGADFT 185
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
VWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+TIVK
Sbjct: 186 VWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVK 245
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+ISAG
Sbjct: 246 AACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIISAG 305
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD SCIS
Sbjct: 306 AASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDSCIS 365
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLD 413
WG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+ +RL+QLD
Sbjct: 366 WGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLNQLD 425
Query: 414 VYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSE 473
+YDG S+ E DR KK +A + S KRKK+KD SE EE+++ E DDS+
Sbjct: 426 IYDGDTST---EVEDRVEVQVAKKASASTNARSNKRKKTKDVSESEEDDD----EEDDSD 478
Query: 474 EQANGQ-SERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQ 524
+ NG+ K + G K S RGRG+ A K + + K + RGRGRP T +Q
Sbjct: 479 DDENGEIKGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPAQ 530
>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
Length = 547
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/512 (68%), Positives = 410/512 (80%), Gaps = 12/512 (2%)
Query: 19 GGELLFCGSTCWDAVGRRK--GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
GGELL+CG+T +G++ G + GNL+SP+RLRPLVGVDIR VA+GC + HCVA+ +
Sbjct: 30 GGELLYCGATV-RTMGQKAVGGGIQGNLLSPSRLRPLVGVDIRSVASGCTAFHCVALGAD 88
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
GRCYTWGRNE+GQLGHGD +QRD PTIVSELSKYKI KA G++HTVVVT+DG + +FG
Sbjct: 89 GRCYTWGRNEKGQLGHGDTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSFGH 148
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
NK+GQLG+GS+RNEIE PV CLV+EVTA CG DFTVWLSSVEG+SIL AGLPQYGQLG
Sbjct: 149 NKYGQLGTGSLRNEIETLPVPCLVTEVTAAVCGGDFTVWLSSVEGSSILTAGLPQYGQLG 208
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HGTDNEYNTKDSSVKL+Y+ QPRPRAIA L+ +TIVKVACGTNHTVAVDS G+VYTWGFG
Sbjct: 209 HGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTIVKVACGTNHTVAVDSSGFVYTWGFG 268
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
GYGRLGHREQKDEW PR V+VFQ+NNVLPP A++SAGS + +CTAGGGQLYMWGK+KN G
Sbjct: 269 GYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGGGQLYMWGKMKNTG 328
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
DDWMYPKPLMDLSGWN+RCM SGNMHH VGAD SCISWG AQYGELGYGP GQKSSA PK
Sbjct: 329 DDWMYPKPLMDLSGWNIRCMASGNMHHVVGADDSCISWGAAQYGELGYGPNGQKSSANPK 388
Query: 377 KVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPK 436
KVD LEGMHV SV CGYG SL+IVDR +G++LD+LD+YDG+ S+Q E ++ T K
Sbjct: 389 KVDSLEGMHVTSVGCGYGMSLIIVDRAKIGDKLDELDIYDGETSTQVEERVEAKVT---K 445
Query: 437 KGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQA-GGKASGRGR 495
K +A ++ S KRKK+ + SE EE+E+ DSE+ NG + K G K S RGR
Sbjct: 446 KASASTNSRSNKRKKNNNLSESEEDEDED-----DSEDDENGVVKGTKGGRGRKPSNRGR 500
Query: 496 GKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQ 527
G+ A K + D K +GRGRGRP T Q +
Sbjct: 501 GRGAKKATPDPKPSGRGRGRPKKTESPPQKAE 532
>gi|38346072|emb|CAE04840.2| OSJNBa0084K01.12 [Oryza sativa Japonica Group]
Length = 521
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/532 (61%), Positives = 389/532 (73%), Gaps = 47/532 (8%)
Query: 5 EAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPL 53
E EK+ G+EK GGELL+CG+T ++ +GR+ G GNLVSPTR+R L
Sbjct: 6 EPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRMRSL 65
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
+GVDIRFVA+GC + V++ Y W V + +YK+
Sbjct: 66 MGVDIRFVASGCSAL----VEMN---YLW---------------------VLNVFRYKVI 97
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
KA GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T CGADFT
Sbjct: 98 KASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGADFT 157
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
VWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+TIVK
Sbjct: 158 VWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVK 217
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+ISAG
Sbjct: 218 AACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIISAG 277
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD SCIS
Sbjct: 278 AASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDSCIS 337
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLD 413
WG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+ +RL+QLD
Sbjct: 338 WGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLNQLD 397
Query: 414 VYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSE 473
+YDG S+ E DR KK +A + S KRKK+KD SE EE+++ E DDS+
Sbjct: 398 IYDGDTST---EVEDRVEVQVAKKASASTNARSNKRKKTKDVSESEEDDD----EEDDSD 450
Query: 474 EQANGQ-SERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQ 524
+ NG+ K + G K S RGRG+ A K + + K + RGRGRP T +Q
Sbjct: 451 DDENGEIKGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPAQ 502
>gi|10086484|gb|AAG12544.1|AC007797_4 Unknown Protein [Arabidopsis thaliana]
Length = 521
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/576 (55%), Positives = 376/576 (65%), Gaps = 92/576 (15%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MAE ++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1 MAEAMNSSEKKDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61 VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
HTVVV++DG SL FGWNK+GQLG GS +N E+E +P+ C+VS EVT ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACGTNHTV W + + + ++F
Sbjct: 241 ACGTNHTV---------FWSY---------------IKTKFNLFG--------------- 261
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
+GGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 262 -----LSGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 316
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-------------------ACGYGH 395
GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+ A
Sbjct: 317 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGTDIADRLEQVTKAREPFFIRALNRKL 376
Query: 396 SLVIVDRTNVGERLD-------QLDVYDGKAS--SQDNEEIDRNSTVPPKKGAAKVSNNS 446
I R + + QL+VYDGK S ++ EE+ + T+ PK+ A S
Sbjct: 377 KRYISSRFGISSSVSLHCLLCLQLEVYDGKGSLEAESVEEV-KEETLAPKQQAVTKRGAS 435
Query: 447 KKRKKSKDS--SEEEEEEENSDYESDDSEEQANGQ-SERKKQAGGKASGRGRGKAANKLS 503
KKRK SK S SE++ +E+NSD E + A+ SE ++A GK
Sbjct: 436 KKRKASKASSDSEQDSDEDNSDKEKEVQGSDADSDYSEDGEEANGKKQSARGRGRGRGAR 495
Query: 504 GDGKGTGRGRGRPTSTNKSSQSVQGKTGKRGRPRKS 539
G G T G+ P T G+RGRPRKS
Sbjct: 496 GRGGRTSNGKAPPVKTG----------GRRGRPRKS 521
>gi|168001938|ref|XP_001753671.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695078|gb|EDQ81423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 436
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/408 (64%), Positives = 319/408 (78%), Gaps = 3/408 (0%)
Query: 7 EKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGN--LVSPTRLRPLVGVDIRFVAAG 64
+K EE GELLFCGS+ W+ +G+++ DG+ L SPTRL L GV I FVA G
Sbjct: 13 KKSQEEAKPSRPAGELLFCGSSSWETIGKKQTG-DGSTLLPSPTRLSVLQGVPIVFVAGG 71
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
+CHC+A+D EGR YTWGRNE+GQLGHGD R+ PTIV+ L+++K+ KA GR+HT+V
Sbjct: 72 STACHCIALDTEGRTYTWGRNEKGQLGHGDTFTRNSPTIVASLARHKVVKAALGRTHTIV 131
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
+T +G SL FG+NKHGQLGSGS + E E SPV+CLV E T+ +CGADFTVWLSS G+SI
Sbjct: 132 ITAEGQSLGFGFNKHGQLGSGSCKEEFEKSPVKCLVQEATSVSCGADFTVWLSSASGSSI 191
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
L+AGLPQYGQLGHGTDNEYN K++SVKL YEAQPRPR IAA+A ++I KVACG NH+VAV
Sbjct: 192 LSAGLPQYGQLGHGTDNEYNAKEASVKLVYEAQPRPRPIAAIASKSITKVACGNNHSVAV 251
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
DS GYVYTWGFGG+GRLGH+EQKDE++PR V+ FQR NVLP AVI+AGS S+ TA GG
Sbjct: 252 DSDGYVYTWGFGGHGRLGHKEQKDEFLPRLVETFQRGNVLPSTAVIAAGSAYSAATAAGG 311
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
QLYMWG++K GD+WMYPKP+MDLSGWN+R +D GN A+ SCISWG YGELGY
Sbjct: 312 QLYMWGRVKTTGDNWMYPKPVMDLSGWNIRSLDCGNTSSIAAAEDSCISWGTGVYGELGY 371
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQL 412
GP G KSSA PKK+D LEG H ISVACG GHSL IVDR ++L+Q+
Sbjct: 372 GPTGPKSSANPKKIDALEGFHTISVACGLGHSLFIVDREKNVDKLEQV 419
>gi|302813443|ref|XP_002988407.1| hypothetical protein SELMODRAFT_128036 [Selaginella moellendorffii]
gi|300143809|gb|EFJ10497.1| hypothetical protein SELMODRAFT_128036 [Selaginella moellendorffii]
Length = 404
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/417 (60%), Positives = 307/417 (73%), Gaps = 32/417 (7%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MA E+ E+E ++GGELL+CG+T WD VGR++ A G+L +PTRL PL GV I F
Sbjct: 13 MAPDAPEQQDEQE---DRGGELLYCGTTSWDTVGRKQ-ADSGSLPAPTRLSPLKGVQIAF 68
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA+G S ++ ++ I +YK+ KAG+GR
Sbjct: 69 VASGSDSL---------------------------VREEKLEIYVLFYRYKVVKAGSGRQ 101
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HTVV+T+DGNS AFG+NKHGQLGSG +++E+E P++CLVSE T +CGADFTVWLSSVE
Sbjct: 102 HTVVITDDGNSFAFGFNKHGQLGSGHVKDEVEKLPLKCLVSEATHVSCGADFTVWLSSVE 161
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
GASIL AGLPQYGQLGHGTDNEYN K+ SVKLAYEAQ RPR +AA + + + KVACG NH
Sbjct: 162 GASILTAGLPQYGQLGHGTDNEYNMKEGSVKLAYEAQSRPRPVAAFSEKMVTKVACGHNH 221
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
TVA DS G+VYTWG+GGYGRLGH+EQKDEW PR V+VFQR NVLPP AV++AG+ S+CT
Sbjct: 222 TVASDSNGFVYTWGYGGYGRLGHKEQKDEWTPRLVEVFQRQNVLPPTAVVAAGAAFSACT 281
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
AGGGQLYMWG++K GD+WMYPKPL DL+GW +R MDSGN V A++SCISWG A G
Sbjct: 282 AGGGQLYMWGRVKATGDNWMYPKPLTDLNGWTIRSMDSGNTISMVAAETSCISWGTAFSG 341
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG-ERLDQLDVYD 416
ELGYGP G KSSA PKK+D LEGMHVISVACG HS++IV R+ G ERL+++ D
Sbjct: 342 ELGYGPSGPKSSANPKKIDSLEGMHVISVACGLAHSMMIVSRSKDGAERLEEVSFLD 398
>gi|302794490|ref|XP_002979009.1| hypothetical protein SELMODRAFT_109857 [Selaginella moellendorffii]
gi|300153327|gb|EFJ19966.1| hypothetical protein SELMODRAFT_109857 [Selaginella moellendorffii]
Length = 404
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/417 (59%), Positives = 306/417 (73%), Gaps = 32/417 (7%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
MA E+ E+E ++GGELL+CG+T WD VGR++ A G+L +PTRL PL GV I F
Sbjct: 13 MAPDAPEQQDEQE---DRGGELLYCGTTSWDTVGRKQ-ADSGSLPAPTRLSPLKGVQIAF 68
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA+G S ++ ++ I +YK+ KAG+GR
Sbjct: 69 VASGSDSL---------------------------VREEKLEIYVLFYRYKVVKAGSGRQ 101
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HTVV+T+DGNS AFG+NKHGQLGSG +++E+E P++CLVSE T +CGADFTVWLSSVE
Sbjct: 102 HTVVITDDGNSFAFGFNKHGQLGSGHVKDEVEKLPLKCLVSEATHVSCGADFTVWLSSVE 161
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G SIL AGLPQYGQLGHGTDNEYN K+ SVKLAYEAQ +PR +AA + + + KVACG NH
Sbjct: 162 GTSILTAGLPQYGQLGHGTDNEYNMKEGSVKLAYEAQSKPRPVAAFSEKMVTKVACGHNH 221
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
TVA DS G+VYTWG+GGYGRLGH+EQKDEW PR V+VFQR NVLPP AV++AG+ S+CT
Sbjct: 222 TVASDSNGFVYTWGYGGYGRLGHKEQKDEWTPRLVEVFQRQNVLPPTAVVAAGAAFSACT 281
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
AGGGQLYMWG++K GD+WMYPKPL DL+GW +R MDSGN V A++SCISWG A G
Sbjct: 282 AGGGQLYMWGRVKATGDNWMYPKPLTDLNGWTIRSMDSGNTISMVAAETSCISWGTAFSG 341
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG-ERLDQLDVYD 416
ELGYGP G KSSA PKK+D LEGMHVISVACG HS++IV R+ G ERL+++ D
Sbjct: 342 ELGYGPSGPKSSANPKKIDSLEGMHVISVACGLAHSMMIVSRSKDGAERLEEVSFLD 398
>gi|147828225|emb|CAN71115.1| hypothetical protein VITISV_033889 [Vitis vinifera]
Length = 445
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/501 (52%), Positives = 313/501 (62%), Gaps = 107/501 (21%)
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+RGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH+VVV+EDG SLAFGWNKHGQLGSG
Sbjct: 4 QRGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSHSVVVSEDGQSLAFGWNKHGQLGSG 63
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
S++NE+E SPVRCLVSEV ACGA+FTVWLSS EGASIL GLPQYGQLGHGTDNE +T
Sbjct: 64 SVKNEVELSPVRCLVSEVKTVACGAEFTVWLSSAEGASIL-YGLPQYGQLGHGTDNEVDT 122
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETI---VKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+S+ + +A ++A + + + + C +A G RLG
Sbjct: 123 --ASLDMVMDAG--HGSLAKFSPDDMALYLWFLCFMKFILA------------GKMFRLG 166
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
HREQKDEWVPRRV+VFQR NVLPPEAVISAGSVNSSCTAGGGQLYMWGK+K GDDWMYP
Sbjct: 167 HREQKDEWVPRRVEVFQRQNVLPPEAVISAGSVNSSCTAGGGQLYMWGKIKITGDDWMYP 226
Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
KPLMDL +SSA+PKKVDILE
Sbjct: 227 KPLMDL-----------------------------------------RSSAVPKKVDILE 245
Query: 383 GMHVISVACGYGHSLVIVDRTNVGERLDQ------------------------------- 411
GMHVI+VACG+G+S+V+VDRTNVG+RLDQ
Sbjct: 246 GMHVITVACGFGNSMVVVDRTNVGDRLDQVILLNLHVQLSFVRIECFSRSLQSGSGFKCV 305
Query: 412 ---------LDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEE 462
LD+YDGKA+ + +EE + + VP K + K +E +
Sbjct: 306 AFRGLGWHELDIYDGKAAGEGSEEPESLNAVPKKTTKKGAAAAKXSENSKKRKKSKESSD 365
Query: 463 ENSDY-----ESDDSEEQANGQSERKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPT 517
S+ +SDDSE + NG++E+K+Q GGKASGRGRGK A K + K +GRGRGRP
Sbjct: 366 SESEEDYEDNDSDDSEVEVNGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPL 425
Query: 518 STNKSSQSVQGKTGKRGRPRK 538
+ K+ Q QGK GKRGRPRK
Sbjct: 426 AVEKTXQHSQGK-GKRGRPRK 445
>gi|449477047|ref|XP_004154913.1| PREDICTED: protein RCC2-like [Cucumis sativus]
Length = 366
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/347 (70%), Positives = 282/347 (81%), Gaps = 13/347 (3%)
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N YNTKDSSV+LAYEAQPRPRAIA+LAGE IVKVACGTNHTVAVDS G+VYTWGFGGYGR
Sbjct: 25 NLYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYGR 84
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
LGH+EQKDEW PRRVD+FQR N LPP+A+ISAGSVNSSCTAGGGQLYMWGK+KN GDDWM
Sbjct: 85 LGHKEQKDEWAPRRVDIFQRRNTLPPDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDWM 144
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
YPKPLMDLSGWN+RCMDSGNMHHFVGAD+SCISWGHAQYGELGYGP GQKSSA+PKKVDI
Sbjct: 145 YPKPLMDLSGWNIRCMDSGNMHHFVGADNSCISWGHAQYGELGYGPMGQKSSALPKKVDI 204
Query: 381 LEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAA 440
LE MHVISVACG GHS+V+VDRTNV +RLDQLD++DGKA + N ++ VP KG+A
Sbjct: 205 LENMHVISVACGAGHSMVVVDRTNVADRLDQLDIHDGKAFDEVNVVLE---AVPQSKGSA 261
Query: 441 -------KVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAGGKASGR 493
++ K++K S + EEEE + + D S+E+ANG S+ +Q G K+ +
Sbjct: 262 IKPSSKAAKASLKAKKRKKSKDSSDSEEEEEENEDGDSSDEEANGLSDTSEQYGSKS--K 319
Query: 494 GRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKTG-KRGRPRKS 539
GRGK + K S GKG+GRGRGRP S NK + QGK G KRGRPRK+
Sbjct: 320 GRGKGSKKPSSGGKGSGRGRGRPPSNNKKPAASQGKAGAKRGRPRKT 366
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 78/200 (39%), Gaps = 44/200 (22%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV------SELSKYKI 112
+ V C + H VAVD G YTWG G+LGH ++ P V + L I
Sbjct: 54 KIVKVACGTNHTVAVDSNGFVYTWGFGGYGRLGHKEQKDEWAPRRVDIFQRRNTLPPDAI 113
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--------VRCLVSEVT 164
AG+ S T G L + W K G + + P P +RC+ S
Sbjct: 114 ISAGSVNSSC---TAGGGQL-YMWGKIKNAGD----DWMYPKPLMDLSGWNIRCMDSGNM 165
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
GAD S ++ G QYG+LG+G + ++ P+ +
Sbjct: 166 HHFVGAD----------NSCISWGHAQYGELGYGP------------MGQKSSALPKKVD 203
Query: 225 ALAGETIVKVACGTNHTVAV 244
L ++ VACG H++ V
Sbjct: 204 ILENMHVISVACGAGHSMVV 223
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
RP ++ L+ KI K G +HTV V +G +G+ +G+LG ++E P V
Sbjct: 43 RPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYGRLGHKEQKDEWAPRRVDIF 102
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
T D + SV + G L +G++ + D+
Sbjct: 103 QRRNTLP---PDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDWM--------------- 144
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVD 276
P+ + L+G I + G H V + +WG YG LG+ QK +P++VD
Sbjct: 145 YPKPLMDLSGWNIRCMDSGNMHHF-VGADNSCISWGHAQYGELGYGPMGQKSSALPKKVD 203
Query: 277 VFQRNNVL 284
+ + +V+
Sbjct: 204 ILENMHVI 211
>gi|384254222|gb|EIE27696.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 476
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/434 (49%), Positives = 281/434 (64%), Gaps = 28/434 (6%)
Query: 6 AEKMVEEETGKEKGGELLFCGSTCWDAVGR------RKGALDG--------NLVSPTRLR 51
AE+ E + KGGE+LF G T W +GR +KG D NLVSP RL+
Sbjct: 2 AEEKALESSSTFKGGEVLFAGGTDWGFIGRNLGGSKKKGDADDAGRAEKFPNLVSPVRLK 61
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
L+ V ++F+AAG SCHC+ DVEGRCYTWGRNE+GQLGHGD +QR+ PTIV L K
Sbjct: 62 SLLDVKVQFIAAGSASCHCIIGDVEGRCYTWGRNEKGQLGHGDLLQRNIPTIVDGLKNVK 121
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTAT 166
I G+ HT VV+ DG S +FG NK GQ G+G++++ E+ SPV+ LVS TA
Sbjct: 122 IVGGAGGKHHTTVVSSDGESYSFGSNKEGQCGTGTLKSNPKNEELLQSPVKALVSGCTAV 181
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACGA+FT+WL + +AG PQYGQLGHGTD+EYN KDSSVK+ Y AQP P I L
Sbjct: 182 ACGAEFTMWLCE---GKLYSAGCPQYGQLGHGTDHEYNAKDSSVKIMYAAQPTPELIKGL 238
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+ +TI VACG NHT+A+D YTWG GGYGRLGH+EQKDE+ P++V+V + +
Sbjct: 239 SDKTIRVVACGHNHTLALDDAAAAYTWGNGGYGRLGHKEQKDEFSPKQVEVLKGRMPVDA 298
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
+ ++ G+ +S CT G QL WGKLK +GD+ MYPK + +L+GW +R + +G
Sbjct: 299 NSPVACGATSSFCTMIGEQLVSWGKLKASGDNTMYPKVVYELAGWKIRSITAGAYTFAAA 358
Query: 347 ----ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D S I+WG AQ+GELGYGP G+KSSA P K LEG+H VA G G++L +VD
Sbjct: 359 ATGDTDISTITWGQAQHGELGYGPKGKKSSANPDKCMALEGVHCHQVAMGIGYALFLVDP 418
Query: 403 TNVGERLDQLDVYD 416
+ ++ +L+V++
Sbjct: 419 EH--PKVKELEVFE 430
>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 402
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/396 (52%), Positives = 260/396 (65%), Gaps = 12/396 (3%)
Query: 16 KEKGGELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+ + GE+LFCG T W VGR K + N++ PTR+ L GV I V G + HC+A
Sbjct: 4 QPEAGEVLFCGMTDWKQVGRGKTDDEDTFPNILEPTRIATLKGVSIAKVCGGSAATHCMA 63
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ +GR +TWGRNE GQLG GD R PT V L+ K+ G+SHTVVVT DGN+
Sbjct: 64 IAADGRVFTWGRNETGQLGLGDVDNRAAPTEVKALAGIKVVDGSCGKSHTVVVTADGNAY 123
Query: 133 AFGWNKHGQLGSGSI------RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
A+G NKHGQLG GSI ++ PV+C VS A ACGA+F++W+ +G +L+
Sbjct: 124 AWGSNKHGQLGVGSIARTKPKEDDNRLVPVQCSVSACVAVACGAEFSMWICGDDG-KLLS 182
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
AGLPQYGQLGHGTD EYN SSVKLAYEAQP+P IAALAG I KVA G NHT+AVD
Sbjct: 183 AGLPQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVDD 242
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQ 305
+G +TWGFGGYGRLGH+ QKDEW P+ V++ + N+ PP+ V++AG S TA GQ
Sbjct: 243 QGKFHTWGFGGYGRLGHKVQKDEWTPKMVEIQGGDRNLCPPDCVVAAGQTTSWVTALMGQ 302
Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH-AQYGELGY 364
+Y +G+LK GD+ MYP P +DL GW LR + G + + I+WG A GELGY
Sbjct: 303 MYCFGRLKTTGDNTMYPVPFLDLQGWRLRSVACGATTYAACGEDQAITWGQGAGCGELGY 362
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
GP G KSSA PK V+ L G HVI VACG GH+L ++
Sbjct: 363 GPEGPKSSANPKLVESLGGKHVIQVACGVGHTLFLI 398
>gi|307103665|gb|EFN51923.1| hypothetical protein CHLNCDRAFT_139571 [Chlorella variabilis]
Length = 470
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 252/408 (61%), Gaps = 30/408 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALD--GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
G LL CG+T + +GR K NL P RL+ L GV + F+AAG +CH + DV G
Sbjct: 14 GTLLVCGATDFYGIGRTKEVRPEYPNLSVPHRLKALEGVKVAFIAAGSSACHSIIGDVNG 73
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
CYTWGRNE+GQLG GD I R+ PT+V L KI AG+SH+ VVT G S FG N
Sbjct: 74 VCYTWGRNEKGQLGLGDTINRNNPTVVEGLRNKKIVAGSAGKSHSAVVTATGESYTFGLN 133
Query: 138 KHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
++GQLG+G ++ ++ +P LVS+ CG DFT+WL + +AG PQY
Sbjct: 134 QYGQLGTGQVKKLKGAEDMSLTPQLALVSKCGKVGCGVDFTMWLCD---GKLWSAGCPQY 190
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGHGTD+ YN DSSVK+ +E QP+PR IA+LA +T+ +VA G NHT+AV S G V+T
Sbjct: 191 GQLGHGTDHSYNAADSSVKMVFEPQPQPRIIASLAEKTVTQVAVGYNHTIAVCSDGGVWT 250
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WGFGGYGRLGH+ Q+DE+ PR ++ +P AV++AG S CT GGQL+ WGKL
Sbjct: 251 WGFGGYGRLGHKVQQDEFKPRLIEALTGRITVPANAVVAAGQTASFCTIVGGQLFAWGKL 310
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV----GADSSCISWGHAQ-YGELGYGPY 367
K +GD+ MYP P LSGWN+R + G+ GA+ S I+WGH+ Y ELGYGP
Sbjct: 311 KPSGDNLMYPVPYEGLSGWNIRSLTCGSSTFACAATYGAEKSTITWGHSNGYSELGYGPA 370
Query: 368 GQKSSAMPKKVDILEGMHVIS---------------VACGYGHSLVIV 400
G+KSSA P K LEG + VA G+GHSL +V
Sbjct: 371 GKKSSANPDKCMALEGAQTLQARLAAGRWPRSRRQGVAMGFGHSLFLV 418
>gi|145355761|ref|XP_001422119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582359|gb|ABP00436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 399
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/396 (47%), Positives = 250/396 (63%), Gaps = 16/396 (4%)
Query: 21 ELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
ELL+CG+T + +VGR+K G +LV P R L VA G + HC A+D EG
Sbjct: 1 ELLYCGATDFASVGRQKTNESGAHADLVEPHRYATLADKTWTRVAGGAAATHCAAIDDEG 60
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
R YTWGRNERGQLGHGD + R PT V L + + A G+ HTVVV E+G+ FG N
Sbjct: 61 RLYTWGRNERGQLGHGDYVSRGTPTRVEALGETRCASAACGKGHTVVVCENGDVYGFGSN 120
Query: 138 KHGQLGSGSIRNEIEP--------SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
K GQLG G+++ +++ +PV+ LV+ + +CGA+FT ++ + GL
Sbjct: 121 KFGQLGCGTMKKQMKKGDAEDDKLTPVKALVTNGKSASCGAEFTAVVT--RDGEVFTYGL 178
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSK 247
PQYGQLGHGTD+EYNT SS+K+ YE QP P+ + A IVK+ACGTNH D
Sbjct: 179 PQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLACGTNHVACFDDA 238
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQL 306
G ++TWG GGYGRLGHR QKDE+ P+ V++ + N++P +AV+ AGS ++ +A GQ+
Sbjct: 239 GKIWTWGNGGYGRLGHRVQKDEFAPKMVEIQGGDRNLVPADAVLGAGSTSTFVSALQGQM 298
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
Y +GKLK GD+ MYP PLMDL GW LR G++ A+ S ++WG YGELGYGP
Sbjct: 299 YAFGKLKTTGDNTMYPVPLMDLQGWVLRDFACGSVTFAGCAEKSAVTWGGGAYGELGYGP 358
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
G+KSSA P V LEG VACG G++L +VD+
Sbjct: 359 KGKKSSANPDLVPSLEGKTTRRVACGNGYTLFLVDK 394
>gi|159486187|ref|XP_001701125.1| hypothetical protein CHLREDRAFT_194222 [Chlamydomonas reinhardtii]
gi|158272019|gb|EDO97827.1| predicted protein [Chlamydomonas reinhardtii]
Length = 463
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 252/406 (62%), Gaps = 21/406 (5%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGR-----RKGALD-----GNLVSPTRLRPLVGVDIRFVA 62
E K +GG LLFCG T + +GR RK LD NL+ PTRL+ V I F+A
Sbjct: 7 EEPKWEGGVLLFCGGTDFAQLGRTGGKTRKEDLDKESQYPNLLRPTRLKTFNDVKIMFIA 66
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
AG +CHC A D EG Y+WGRNERGQLGHGD QR+ PT V+ L+ + + A G++H+
Sbjct: 67 AGPAACHCFAGDSEGNLYSWGRNERGQLGHGDFAQRNVPTKVAALTGHFVIGASGGKNHS 126
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSI-------RNEIEPSPVRCLVSEVTATACGADFTVW 175
VT DG++ A+G N HGQ G+G + + +I +P RC++ ACG DFT+W
Sbjct: 127 AAVTRDGSAYAWGINAHGQCGTGRVSAAKAPFKEDIVLNPTRCIIENCQQVACGIDFTLW 186
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L I+ AG QYG LG G D+ YN KDSS+++ +EA P +A L ++++A
Sbjct: 187 LCD---GKIMAAGNGQYGVLGDGVDHSYNAKDSSIQILFEAVATPHRVAGLDDVKVLRIA 243
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G NH +A D +G Y+WG GGYGRLGH+ Q+DE PR+++VF R N++P A+++AG
Sbjct: 244 AGHNHCLAYDDQGSAYSWGNGGYGRLGHKIQQDEDKPRKLEVFTRRNLVPHNAILAAGGT 303
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
+S CT Q++ WGKLK NGD+ MYP P+ DL GWN+R G AD++ I+WG
Sbjct: 304 SSFCTGVANQVHCWGKLKVNGDNQMYPVPVNDLVGWNVRSFACGPGTFAAAADNAVITWG 363
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
A GELG+GP +KSSA P K + LEG H VACG G ++ +VD
Sbjct: 364 AATNGELGFGP-NKKSSANPAKCEPLEGGHTHQVACGIGFTMFLVD 408
>gi|308813660|ref|XP_003084136.1| regulator of chromosome condensation (ISS) [Ostreococcus tauri]
gi|116056019|emb|CAL58552.1| regulator of chromosome condensation (ISS) [Ostreococcus tauri]
Length = 484
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/403 (46%), Positives = 249/403 (61%), Gaps = 22/403 (5%)
Query: 20 GELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVA--AGCVSCHCVAVD 74
GEL + G+T + VGR K DG +L P L D+RFVA G + HC A+D
Sbjct: 52 GELAYAGATDYARVGRGKTNPDGHRPDLTEPHAYEALR--DVRFVALGGGAAATHCAAID 109
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSL 132
EGR +TWGRNERGQLGHGD+ R PT V L + +K G+SHT VV +G+
Sbjct: 110 SEGRLWTWGRNERGQLGHGDRTTRGAPTEVRALRELDVKCVSVACGKSHTAVVCSNGDVY 169
Query: 133 AFGWNKHGQLGSGSIRNEIEP--------SPVRCLVSEVTATACGADFTVWLSSVEGASI 184
FG NK GQ+G G+++ ++ +PV+ LV+ + +CG +FT L+ +
Sbjct: 170 GFGSNKQGQIGCGTMKKVMKKGDAEDDKLTPVKALVANGASVSCGGEFTAVLT--RDGEV 227
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTV 242
GLPQYGQLGHGTD+EYNT SS+K+ YE QP P+ + A IVK++CG NH
Sbjct: 228 FTYGLPQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLSCGVNHVA 287
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTA 301
D G ++TWGFGGYGRLGHR QKDE+ P+ V++ + N+ P +AVI AGS ++ +A
Sbjct: 288 CFDDAGKIWTWGFGGYGRLGHRVQKDEFAPKMVEIQGGDRNLCPADAVIGAGSTSTFVSA 347
Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
GQLY +GK+K GD+ MYP P MDL GW LR +GN+ A+ S ++WG QYGE
Sbjct: 348 LQGQLYAFGKIKTTGDNLMYPTPFMDLQGWVLRDFSAGNVTFAACAEKSAVTWGGGQYGE 407
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
LGYGP G+KSSA P V LEG +VACG G++L +VD+ +
Sbjct: 408 LGYGPKGKKSSANPDLVPSLEGKRTYAVACGVGYTLFLVDKED 450
>gi|302830842|ref|XP_002946987.1| hypothetical protein VOLCADRAFT_79393 [Volvox carteri f.
nagariensis]
gi|300268031|gb|EFJ52213.1| hypothetical protein VOLCADRAFT_79393 [Volvox carteri f.
nagariensis]
Length = 417
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 221/351 (62%), Gaps = 9/351 (2%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
V + F+AAG +CHC D G ++WGRNE+GQLGHGD QR+ P V+ L + A
Sbjct: 13 VKVMFIAAGPAACHCFVGDSAGNLWSWGRNEKGQLGHGDFAQRNVPAKVAGLDGKFVIGA 72
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGA 170
GR+H+ V +DG+S A+G N+H + N +I +P RC++ T ACG
Sbjct: 73 SGGRNHSACVCQDGSSYAWGINQHVDVACLFSLNVPLGADIILTPTRCVIENCTQVACGI 132
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFT+WL G ++ AG QYG +G G D+ YN KDSS+++ YEA PR +A L T
Sbjct: 133 DFTMWLC---GGRVMTAGNGQYGVIGDGVDHSYNAKDSSIQILYEAVATPRRVAGLDDVT 189
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
++K+A G NH + D +G Y+WG GGYGRLGH+ Q+DE PR+++VF R N++P +A++
Sbjct: 190 VLKIAAGHNHCLCYDDQGSCYSWGNGGYGRLGHKIQQDEDKPRKIEVFTRRNLVPKDAIL 249
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
+AG +S CT GQ++ WGKLK NGD+ MYP P+ DL GWN+R G AD+S
Sbjct: 250 AAGGTSSFCTGVAGQVHCWGKLKVNGDNQMYPVPVNDLVGWNVRSFACGPGTFAAAADNS 309
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
I+WG A GELG+GP +KSSA P K + L+G + VACG G +L +VD
Sbjct: 310 VITWGAATNGELGFGP-NKKSSANPAKCEPLDGGYTHQVACGIGFTLFLVD 359
>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
Length = 484
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 248/420 (59%), Gaps = 35/420 (8%)
Query: 6 AEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDG--------NLVSPTRLRPLVGVD 57
A+K + G + GELL CG T WD +GR + + NL P R + GV
Sbjct: 53 ADKPPLKLEGSKVAGELLICGGTNWDLIGRNQLPKNATGSANRGQNLWGPHRYGSMSGVR 112
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R V +G S H + + +G+ +WGRN++GQLGHGD + D PT++ L+ + I +A
Sbjct: 113 VRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAAC 172
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVW 175
GR+HT+ +T+DG AFG NK GQLG G+ N PSP + + + V ACGA+F++
Sbjct: 173 GRNHTLCLTDDGKVFAFGENKMGQLGLGN-ENAAVPSPTQIVYTGPPVVKVACGAEFSMV 231
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET----- 230
+ GA + + G P+YGQLG+ TD +Y +S K+AY+ + PR I+ +T
Sbjct: 232 I-DCRGA-LYSFGCPEYGQLGNNTDGQYFV--TSNKMAYDCELVPRRISVFIEKTKDGFI 287
Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+V + CGTNHTVA+D + V+TWGFGGYGRLGH EQKDE VPR V +F
Sbjct: 288 NPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFD---- 343
Query: 284 LPPEA--VISAGSVNS-SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
P I AG+ S GGQLY+WG+ K G+ MYPKP+ DLSGW++R + N
Sbjct: 344 YPGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKTTGEANMYPKPVQDLSGWDVRSVGCSN 403
Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V AD S ISWG + YGELGYG KSS +PK+V L+G+++ V+CGYGH++ I
Sbjct: 404 RSIVVAADESTISWGPSPTYGELGYGENKAKSSTIPKEVKTLDGIYIHKVSCGYGHTIFI 463
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG--NMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N G + P +SG +R + SG ++H + D +SWG G+LG+G K
Sbjct: 94 NRGQNLWGPHRYGSMSGVRVRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHG--DTK 151
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+P ++ L G +++ ACG H+L + D
Sbjct: 152 RVDVPTVIESLAGFNIVEAACGRNHTLCLTD 182
>gi|303290458|ref|XP_003064516.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454114|gb|EEH51421.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 361
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/323 (52%), Positives = 217/323 (67%), Gaps = 10/323 (3%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLA 133
+GR + WGRNE GQLG GD + R PT++ EL K G+ HTV++ E G + A
Sbjct: 24 DGRVFAWGRNENGQLGLGDTVDRGIPTVIKELQDKGAKAIDGACGKHHTVILCEGGVTYA 83
Query: 134 FGWNKHGQLGSGSI-----RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
FG NKHGQLG G+I +++ +PV+ V+ TA ACG +FT+W++ GA + +AG
Sbjct: 84 FGSNKHGQLGIGTIARKAREDDVRTTPVQTQVANATAVACGGEFTMWIAGENGA-LYSAG 142
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
LPQYGQLGHG+D+EYN K+ SVKLAY+ QP PRAIAAL+ + I++VACG NHT+ VDS G
Sbjct: 143 LPQYGQLGHGSDHEYNMKEGSVKLAYQPQPSPRAIAALSDKKIIRVACGHNHTICVDSVG 202
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQLY 307
VYTWGFGGYGRLGH+ QKDE+ P++V+V + N+ PP+ V++AGSV S TA GQ+Y
Sbjct: 203 KVYTWGFGGYGRLGHKVQKDEFAPKQVEVQGGDRNLCPPDCVVAAGSVTSWFTALMGQMY 262
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW-GHAQYGELGYGP 366
+GKLK NGD+ MYP P +DL GWNLR + G + I+W GELGYG
Sbjct: 263 CFGKLKTNGDNTMYPIPFLDLQGWNLRSVACGATTFAACGEREAITWGQGGGNGELGYGA 322
Query: 367 YGQKSSAMPKKVDILEGMHVISV 389
G KSSA PK VD L G V V
Sbjct: 323 SGPKSSANPKLVDSLSGKMVHRV 345
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD--RP 101
PT ++ L + + C H V + G Y +G N+ GQLG G K + D R
Sbjct: 49 PTVIKELQDKGAKAIDGACGKHHTVILCEGGVTYAFGSNKHGQLGIGTIARKAREDDVRT 108
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS------------IRN 149
T V A G + E+G + G ++GQLG GS +
Sbjct: 109 TPVQTQVANATAVACGGEFTMWIAGENGALYSAGLPQYGQLGHGSDHEYNMKEGSVKLAY 168
Query: 150 EIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYN 204
+ +PSP R + + ++ ACG + T+ + SV + G YG+LGH +E+
Sbjct: 169 QPQPSP-RAIAALSDKKIIRVACGHNHTICVDSV--GKVYTWGFGGYGRLGHKVQKDEFA 225
Query: 205 TKDSSVK 211
K V+
Sbjct: 226 PKQVEVQ 232
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 65/191 (34%), Gaps = 70/191 (36%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-------HREQKDEWVPRRVDVFQR 280
G + ACG +HTV + G Y +G +G+LG RE P + V
Sbjct: 59 GAKAIDGACGKHHTVILCEGGVTYAFGSNKHGQLGIGTIARKAREDDVRTTPVQTQV--- 115
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
N++ A GG+ MW
Sbjct: 116 --------------ANATAVACGGEFTMW------------------------------- 130
Query: 341 MHHFVGADSSCISWGHAQYGELGYGP---YGQKSSAM---------PKKVDILEGMHVIS 388
G + + S G QYG+LG+G Y K ++ P+ + L +I
Sbjct: 131 ---IAGENGALYSAGLPQYGQLGHGSDHEYNMKEGSVKLAYQPQPSPRAIAALSDKKIIR 187
Query: 389 VACGYGHSLVI 399
VACG+ H++ +
Sbjct: 188 VACGHNHTICV 198
>gi|291235191|ref|XP_002737524.1| PREDICTED: CG9135-like [Saccoglossus kowalevskii]
Length = 483
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 242/435 (55%), Gaps = 33/435 (7%)
Query: 7 EKMVEEETGKEKGGELLFCGSTCWDAVGRRK--GALDG-------NLVSPTRLRPLVGVD 57
E+M G + G+LLFCG T WD +GR A G NL P + + +
Sbjct: 51 ERMKIRLEGSKTSGDLLFCGGTNWDLIGRASLPKAAAGVKPQGGRNLWGPHHITSIGKIR 110
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR V +G +CH + + +G+ +WGRN+R QLGHGD ++RD PT++ L ++ I A
Sbjct: 111 IRSVISGPTACHSIIITEDGKAMSWGRNDREQLGHGDNVRRDNPTLIESLKEHNIVSAAC 170
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWL 176
GR+HT+ +TE G AFG N++GQLG G + P V + ACGADF++ L
Sbjct: 171 GRNHTLCLTEYGTVFAFGDNRYGQLGIGLQSASVGNPVKVGHKGQPIVKVACGADFSMIL 230
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------ 230
S+ + G P+Y QLGH D +Y +S KL+++ Q PR I +
Sbjct: 231 DC--KGSLHSFGHPEYSQLGHNNDGQYFV--TSNKLSFDCQLVPRKIQMFVEKNKGHVMP 286
Query: 231 -----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ VACGTNH +A+D + V+TWGFGGYGRLGH E KDE VPR + F
Sbjct: 287 VPNVLLTDVACGTNHVIALDIRKRVFTWGFGGYGRLGHAEPKDEKVPRNLKTFDVTG--R 344
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
+ I G+ S + G LY WG+ K G+ MYPKP+ DL+GW +R + N +
Sbjct: 345 GASSIYCGASFSMAVSEQGILYFWGQTKTTGEATMYPKPVQDLTGWKIRSVGCSNHSIVI 404
Query: 346 GADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV---- 400
AD S ISWG + YGELGYG +G KSS PK++ +L+G+++ SVACGYGH+L+I
Sbjct: 405 AADDSVISWGPSPTYGELGYGDHGAKSSTQPKEIKLLDGINIHSVACGYGHTLMIARNDS 464
Query: 401 -DRTNVGERLDQLDV 414
+ TN +L + V
Sbjct: 465 DEDTNSINKLPEFSV 479
>gi|449527695|ref|XP_004170845.1| PREDICTED: protein RCC2 homolog, partial [Cucumis sativus]
Length = 186
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 155/166 (93%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GELLFCG+T WD +GR+KG ++GNLVSPTRLRPLVG+DIRFVA+GC SCHCVA+DVEGRC
Sbjct: 21 GELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVASGCTSCHCVALDVEGRC 80
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWGRNE+GQLGHGD IQRDRPTIVS+LSKYK+ KAGAGR+HTVVVTEDGNSL+FGWNKH
Sbjct: 81 YTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKH 140
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
GQLGSGSI+NEIE SPVRCLVSEV TACG +FT WL+S+EGASIL
Sbjct: 141 GQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFTAWLTSIEGASIL 186
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 149 NEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
N + P+ +R LV A+ C + V L VEG G + GQLGHG +
Sbjct: 44 NLVSPTRLRPLVGIDIRFVASGCTSCHCVALD-VEG-RCYTWGRNEKGQLGHG---DLIQ 98
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+D RP ++ L+ +VK G NHTV V G ++G+ +G+LG
Sbjct: 99 RD-----------RPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKHGQLGSGS 147
Query: 266 QKDE 269
K+E
Sbjct: 148 IKNE 151
>gi|424513123|emb|CCO66707.1| predicted protein [Bathycoccus prasinos]
Length = 472
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 238/422 (56%), Gaps = 37/422 (8%)
Query: 20 GELLFCGSTCWDAVGRRKG---ALDGNLVSPTRLRPLVG---VDIRFVAAGCVSCHCVAV 73
G +LFCG T + VGR K ++ N+ P+++ ++ F+A+G + H VA+
Sbjct: 20 GAILFCGCTDFKNVGRTKQIDESVFANVNVPSKISTFENENDLEFTFIASGSAAAHNVAI 79
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-----------SKYKIKKAGAGRSHT 122
D +GR + WGRNE GQLG GDK R+ P++V + KI A G++HT
Sbjct: 80 DTKGRLWAWGRNENGQLGTGDKDNRNAPSVVKGIHFGENADGEGEEAVKIVWAACGKNHT 139
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSI-----------RNEIEPSPVRCLVSEVTATACGAD 171
+ + +G A G NK GQLG R E S V AT CG D
Sbjct: 140 IAIDSEGGFYACGSNKSGQLGVPITWSRQKKNVDDERVEFVKSASATQAKFVKAT-CGVD 198
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGE 229
FTV L+ +G + + G PQYGQLGHG D+EYN K+ +VKLAYE QP P+ I + L E
Sbjct: 199 FTV-LTDADG-KMWSFGCPQYGQLGHGDDHEYNMKEGTVKLAYEPQPTPKMIRSGDLNAE 256
Query: 230 T---IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLP 285
+VKV CG NH G +YTWG GGYGRLGHR QKDE+ P+ V+V + N++P
Sbjct: 257 KDYKVVKVCCGHNHVACFCEDGKLYTWGNGGYGRLGHRVQKDEFSPKMVEVQGGDRNLIP 316
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
+A+++ GS + +A GQLY +GKLK +GD+ MYP P MDL GW LR SG +
Sbjct: 317 KDAILACGSTATHFSACMGQLYAFGKLKVSGDNTMYPMPQMDLQGWVLRDFASGAVTFAT 376
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D ++WG YGELGYGP G+KSSA P V L+G I VACG G +L +V +V
Sbjct: 377 CQDEMTVTWGAGGYGELGYGPEGKKSSACPDVVPSLQGKRTIMVACGLGQTLFLVKSEDV 436
Query: 406 GE 407
E
Sbjct: 437 KE 438
>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 235/419 (56%), Gaps = 38/419 (9%)
Query: 20 GELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
G LL CG T WD +GR+ K NL P + L G+ +R A+G +CH + V
Sbjct: 69 GTLLICGGTNWDLIGRKELPKSAKNYGGPNLWEPHLISTLSGIRVRHAASGPSACHSIIV 128
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
+GR ++GRN++GQLGHG + D P ++ L + I +A GR HT+++T+ G
Sbjct: 129 CEDGRVMSFGRNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFG 188
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLP 190
FG NK GQ+G G + P P++ + +VT CGA+F++ L E I + G P
Sbjct: 189 FGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLD--ENGDIFSFGSP 246
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA------------GETIVKVACGT 238
+YGQLGH TD +Y SS K+ ++ + PR + G I V CG
Sbjct: 247 EYGQLGHNTDGQYIV--SSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGN 304
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
NHT+A+D +G V+TWGFGGYGRLGH++ KDE VPR + F N +VI AGS S
Sbjct: 305 NHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPRLLTFF---NTKGNPSVIFAGSTYSM 361
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
GQLY WG+ K +G+ MYPKP+ DLSGW +R + + AD S +SWG +
Sbjct: 362 AVC-MGQLYFWGQTKQSGEAAMYPKPVQDLSGWQVRSVGCSKSSIVIAADDSVVSWGPSP 420
Query: 358 QYGELGYGPY--GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV------DRTNVGER 408
YGELGYG GQKSS PK V+ LE ++V SV CG GH+L I D+T +G++
Sbjct: 421 TYGELGYGLKKGGQKSSTNPKIVEPLEDIYVHSVTCGMGHTLFIAKDVTPEDKTMLGKK 479
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 246/438 (56%), Gaps = 36/438 (8%)
Query: 11 EEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVA 62
E+ G + G+LL G+T WD +GR++ L NL P R L GV +R V
Sbjct: 55 EKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVV 114
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LSK I A GR+HT
Sbjct: 115 SGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHT 174
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVE 180
+ +TE G+ AFG NK GQLG G+ + I PSP + + + +T ACGA+F++ +
Sbjct: 175 LALTETGSVFAFGENKMGQLGLGNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMDC-- 231
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET---------- 230
++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 232 KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPN 289
Query: 231 --IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE- 287
+ VACGTNHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 290 VVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRG 345
Query: 288 -AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
A I AG S + G L+ WG + + MYPK + DL GW +R + G V
Sbjct: 346 AAQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVA 405
Query: 347 ADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRT 403
AD S ISWG + +GELGYG + KSS ++V L+G++ VA GY HSLVI +
Sbjct: 406 ADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARDESE 465
Query: 404 NVGERLDQLDVYDGKASS 421
E+L +L Y+ + S
Sbjct: 466 TEKEKLKKLPEYNPRTLS 483
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 243/429 (56%), Gaps = 36/429 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 20 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL 79
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LSK I A GR+HT+ +TE G+
Sbjct: 80 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSV 139
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + I PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 140 FAFGENKMGQLGLGNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 196
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 197 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 254
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAGSV 295
TNHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P A I AG
Sbjct: 255 TNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGAAQIYAGYT 310
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 311 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWG 370
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQL 412
+ +GELGYG + KSS ++V L+G++ VA GY HSLVI D + E+L +L
Sbjct: 371 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARDESEAEKEKLKKL 430
Query: 413 DVYDGKASS 421
Y+ + S
Sbjct: 431 PEYNPRTLS 439
>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
Length = 453
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 244/440 (55%), Gaps = 36/440 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVG 55
L+A + E+ G + G+LL G+T WD +GR++ L NL P R L G
Sbjct: 19 LQAPALREKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAG 78
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
V +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A
Sbjct: 79 VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLA 138
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F+
Sbjct: 139 ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 197
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 198 MIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDG 253
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 254 QILPVPNVVVRDVACGANHTLILDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-- 311
Query: 282 NVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
P I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 312 --FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACG 369
Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLV
Sbjct: 370 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 429
Query: 399 IV--DRTNVGERLDQLDVYD 416
I + E++ +L Y+
Sbjct: 430 IARDESETEKEKIKRLPEYN 449
>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
Length = 520
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 221
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 278
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 392
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESETEKEKIKKL 512
Query: 413 DVYD 416
Y+
Sbjct: 513 PEYN 516
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 146 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 205
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 206 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 265
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 266 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 322
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 323 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 380
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 381 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 436
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 437 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 496
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 497 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 556
Query: 413 DVYD 416
Y+
Sbjct: 557 PEYN 560
>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
Length = 520
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/405 (39%), Positives = 228/405 (56%), Gaps = 34/405 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P +V LS I A GR+HT+ +TE G+
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSV 221
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 278
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 392
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVI 497
>gi|281346734|gb|EFB22318.1| hypothetical protein PANDA_013306 [Ailuropoda melanoleuca]
Length = 427
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 237/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
LAFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 LAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 360 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVIARDESETEKEKIKKL 419
Query: 413 DVYD 416
Y+
Sbjct: 420 PEYN 423
>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
AltName: Full=Telophase disk protein of 60 kDa
gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
Length = 522
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 223
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 224 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 280
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 281 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 338
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 339 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 394
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 395 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 454
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 455 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 514
Query: 413 DVYD 416
Y+
Sbjct: 515 PEYN 518
>gi|301777289|ref|XP_002924055.1| PREDICTED: protein RCC2-like [Ailuropoda melanoleuca]
Length = 447
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 237/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 29 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 88
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 89 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSV 148
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
LAFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 149 LAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 205
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 206 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 263
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 264 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 319
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 320 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 379
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 380 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVIARDESETEKEKIKKL 439
Query: 413 DVYD 416
Y+
Sbjct: 440 PEYN 443
>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
Length = 464
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 245/435 (56%), Gaps = 36/435 (8%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRF 60
++++ G + G+LL G+T WD +GR++ L NL P R L GV +R
Sbjct: 35 LLQKLEGSKCRGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRS 94
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ L I A GR+
Sbjct: 95 VVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRN 154
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSS 178
HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ +
Sbjct: 155 HTLALTETGSVYAFGENKMGQLGLGNQTDAV-PSPTQIMYNGQPITKMACGAEFSMIMDC 213
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-------- 230
++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 214 --KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPV 269
Query: 231 ----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 270 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPG 325
Query: 287 E--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
A I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 326 RGAAQIYAGYTCSFAVSETGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSII 385
Query: 345 VGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DR 402
V AD S ISWG + +GELGYG + KSS ++V L+G++ VA GY HSLVI D
Sbjct: 386 VAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSLVIARDE 445
Query: 403 TNV-GERLDQLDVYD 416
++ E+L +L Y+
Sbjct: 446 SDAEKEKLHKLPEYN 460
>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
Length = 521
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 98 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 157
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 158 AAHSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 217
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
E G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 218 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 274
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 332
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVI 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P A I
Sbjct: 333 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGAAQI 388
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 389 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 448
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI
Sbjct: 449 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVI 498
>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
Length = 523
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 105 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 164
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 165 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 224
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 225 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 281
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 282 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 339
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 340 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 395
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 396 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 455
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 456 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 515
Query: 413 DVYD 416
Y+
Sbjct: 516 PEYN 519
>gi|427796171|gb|JAA63537.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 550
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 222/403 (55%), Gaps = 31/403 (7%)
Query: 19 GGELLFCGSTCWDAVGRRK-------GALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHC 70
G LLF G T WD +GRR + + NL P RL P ++ V +GC +CH
Sbjct: 137 AGTLLFSGGTNWDTIGRRPKDKQKAGASQERNLWGPHRLAWPH---RVKAVFSGCSACHT 193
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
V + +G+ +TWGRN++GQLG D +RD PT+V L + A GR+HT+ +T+ G+
Sbjct: 194 VLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLTDHGS 253
Query: 131 SLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
A G NK GQ G GS + P+ V + +CG +F+V L G + G
Sbjct: 254 VFACGDNKMGQCGVGSQNASVHVPTRVAFKLRPAVRVSCGGEFSV-LVDCRG-HVYTFGC 311
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH TD Y +S KL ++ + PR + IV+VA G
Sbjct: 312 PEYGQLGHNTDGRYFV--TSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVEVASG 369
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
NHT+A+D + ++WGFGGYGRLGH E KDE VPR + F+ N + AG S
Sbjct: 370 LNHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVPRLIKAFEGPN--RGLCSVYAGGTFS 427
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG-H 356
+ G LY WG + G+ MYPKP+ DL+GW++R + N V AD S ISWG H
Sbjct: 428 MAVSELGVLYFWGMNNHGGEATMYPKPIQDLTGWHIRGIGCSNKSIVVLADESVISWGPH 487
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YGELGYG QKSS P++V +LEG+HV +VACG GHS+ I
Sbjct: 488 PTYGELGYGEGRQKSSTTPQEVRLLEGIHVHAVACGLGHSVFI 530
>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
cuniculus]
Length = 560
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 239/424 (56%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 142 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 201
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 202 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 261
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ ++ +G ++ + G
Sbjct: 262 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSM-ITDCKG-NLYSFGC 318
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 319 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 376
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 377 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 432
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 433 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 492
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E+L +L
Sbjct: 493 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDEAETEKEKLRKL 552
Query: 413 DVYD 416
Y+
Sbjct: 553 PEYN 556
>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
Length = 520
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 236/423 (55%), Gaps = 36/423 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T+ G+
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 221
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGC 278
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYT 392
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E+L +L
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRL 512
Query: 413 DVY 415
Y
Sbjct: 513 PEY 515
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 243/443 (54%), Gaps = 36/443 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 20 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGC 79
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I
Sbjct: 80 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 139
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA
Sbjct: 140 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 198
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 199 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 254
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 255 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 314
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P I AG S + G L+ WG + + MYPK + DL GW +R +
Sbjct: 315 D----FPGRGASRIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 370
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY H
Sbjct: 371 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 430
Query: 396 SLVIV--DRTNVGERLDQLDVYD 416
SLVI + E++ +L Y+
Sbjct: 431 SLVIARDESETEKEKIKKLPEYN 453
>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
Length = 460
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 239/429 (55%), Gaps = 36/429 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 37 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 96
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 97 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 156
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
E G+ LAFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 157 ETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 213
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 214 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 271
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 272 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 327
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 328 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 387
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI + E
Sbjct: 388 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVIARDESETEKE 447
Query: 408 RLDQLDVYD 416
++ +L Y+
Sbjct: 448 KIKKLPEYN 456
>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
Length = 448
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 243/440 (55%), Gaps = 36/440 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVG 55
L A V++ G + G+LL G+T WD +GR++ L NL P R L G
Sbjct: 14 LSALWEVKKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAG 73
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
V +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A
Sbjct: 74 VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSA 133
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F+
Sbjct: 134 ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 192
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 193 MIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDG 248
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 249 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-- 306
Query: 282 NVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
P I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 307 --FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACG 364
Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLV
Sbjct: 365 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 424
Query: 399 IV--DRTNVGERLDQLDVYD 416
I + E++ +L Y+
Sbjct: 425 IARDESETEKEKIKKLPEYN 444
>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
Length = 427
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 360 PSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIARDESETEKEKIKKL 419
Query: 413 DVYD 416
Y+
Sbjct: 420 PEYN 423
>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
Length = 484
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 235/421 (55%), Gaps = 34/421 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVG 55
L+ ++ + G + G+LL G+T WD +GR++ L NL P R L G
Sbjct: 50 LKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSG 109
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
V +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A
Sbjct: 110 VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLA 169
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
GR+HT+ +T+ G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F+
Sbjct: 170 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 228
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 229 MLMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDG 284
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 285 QILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-- 342
Query: 282 NVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
P I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 343 --FPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACG 400
Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLV
Sbjct: 401 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 460
Query: 399 I 399
I
Sbjct: 461 I 461
>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
Length = 500
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 238/428 (55%), Gaps = 36/428 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 77 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 136
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 137 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 196
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
+ G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 197 DTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNL 253
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 311
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 312 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQI 367
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 368 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 427
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E
Sbjct: 428 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKE 487
Query: 408 RLDQLDVY 415
RL +L Y
Sbjct: 488 RLQRLPEY 495
>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
Length = 522
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGSV 223
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 224 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 280
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 281 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 338
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 339 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 394
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 395 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 454
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 455 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 514
Query: 413 DVYD 416
Y+
Sbjct: 515 PEYN 518
>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
Length = 427
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/405 (39%), Positives = 228/405 (56%), Gaps = 34/405 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P +V LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI
Sbjct: 360 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVI 404
>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
Length = 427
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 360 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 419
Query: 413 DVYD 416
Y+
Sbjct: 420 PEYN 423
>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
Length = 427
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKVACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 360 PSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIARDESETEKEKIKKL 419
Query: 413 DVYD 416
Y+
Sbjct: 420 PEYN 423
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 236/423 (55%), Gaps = 36/423 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 66 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 125
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T+ G+
Sbjct: 126 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 185
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 186 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGC 242
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 243 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 300
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 301 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYT 356
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 357 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 416
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E+L +L
Sbjct: 417 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRL 476
Query: 413 DVY 415
Y
Sbjct: 477 PEY 479
>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
africana]
Length = 523
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 227/405 (56%), Gaps = 34/405 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R GV +R V +G + H +
Sbjct: 105 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCXSGVRVRTVVSGSCAAHSL 164
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 165 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSV 224
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 225 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 281
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 282 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 339
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 340 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 395
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 396 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWG 455
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI
Sbjct: 456 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVI 500
>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
Length = 427
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 9 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 69 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 129 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 185
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 186 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 244 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 299
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 300 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 359
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 360 PSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 419
Query: 413 DVYD 416
Y+
Sbjct: 420 PEYN 423
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 238/429 (55%), Gaps = 36/429 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 84 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 143
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 144 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 203
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
E G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 204 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 260
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 318
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 319 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 374
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 375 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 434
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI + E
Sbjct: 435 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKE 494
Query: 408 RLDQLDVYD 416
++ +L Y+
Sbjct: 495 KIKKLPEYN 503
>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
Length = 655
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 238/426 (55%), Gaps = 36/426 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 237 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 296
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 297 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 356
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 357 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 413
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 414 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 471
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 472 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 527
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 528 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 587
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E++ +L
Sbjct: 588 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESEAEKEKIRKL 647
Query: 413 DVYDGK 418
Y+ +
Sbjct: 648 PEYNPR 653
>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
Length = 474
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 237/432 (54%), Gaps = 40/432 (9%)
Query: 7 EKMVEEETG-KEKG-GELLFCGSTCWDAVGRR--KGALDGNLVSPTRLRP-------LVG 55
EK+ EE +KG G+LL G W+ G+R KG T++RP G
Sbjct: 52 EKLPEELLAVYDKGPGKLLIAGMVSWEMTGKRDSKGV--------TKIRPNLFTFHRFTG 103
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
R +A+ C + H V +D + +T+GRN+ QLGHGD + ++PT V++L+ + + +A
Sbjct: 104 ETYRSMASFCSAAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQA 163
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
GR+HT+ +T+ G A G NK GQ G G+ I SP R + + CGA+F+
Sbjct: 164 ACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTIT-SPTRISYNGPPIIKVGCGAEFS 222
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------I 223
V L ++G ++ GLP+YGQLGH TD Y + + +E QPR +
Sbjct: 223 VIL-DIKG-NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHV 280
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ I+ ACG NHTVA+DSK Y+WGFGG GRLGH EQKDE VPR + F N
Sbjct: 281 LPIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQN- 339
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
+ GS S + G LY++G+ K G+ MYPKP+ DL+GWN+ + +G
Sbjct: 340 -RKVMRVFCGSSYSLAISDIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITSIGTGYTSI 398
Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ AD S I+WG + YGELG G QKSS+ PK+V +EGM + VA GY HS+++V+
Sbjct: 399 VISADDSLIAWGASPTYGELGLGDL-QKSSSTPKEVTRMEGMKIPMVALGYSHSMLLVNT 457
Query: 403 TN--VGERLDQL 412
+ E+ D L
Sbjct: 458 EHEKTKEKYDNL 469
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 240/428 (56%), Gaps = 36/428 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 75 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 134
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 135 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 194
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
+ G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ L +G ++
Sbjct: 195 DTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSM-LMDCKG-NL 251
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 309
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 310 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQI 365
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 366 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 425
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E
Sbjct: 426 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKE 485
Query: 408 RLDQLDVY 415
+L +L Y
Sbjct: 486 KLQRLPEY 493
>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
Length = 427
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 238/429 (55%), Gaps = 36/429 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 4 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 63
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 64 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLATCGRNHTLALT 123
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
E G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T +
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI + E
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKE 414
Query: 408 RLDQLDVYD 416
++ +L Y+
Sbjct: 415 KIKRLPEYN 423
>gi|390336513|ref|XP_791849.3| PREDICTED: protein RCC2 homolog [Strongylocentrotus purpuratus]
Length = 477
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 220/425 (51%), Gaps = 33/425 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDG---------NLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
G LLF G T WD +GR K NL P RL L G+ +R V +G SCH
Sbjct: 53 GTLLFSGGTNWDLIGRHKLTKAAASRPIIGGRNLWGPHRLSALEGIRVRNVFSGPSSCHS 112
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
V + EG+ T+GRN+R QLGHGD +RD PT+V L + I A GR+HT+ +T+DG
Sbjct: 113 VIITEEGKAMTFGRNDREQLGHGDDYRRDVPTLVEGLEDHHIVTAACGRNHTMCLTDDGT 172
Query: 131 SLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVW-----LSSVEGASI 184
AFG N+ GQ G G + + P S + ACGADF++
Sbjct: 173 VFAFGDNRMGQCGIGVQSSSVGTPCKPNYYGSPIVKVACGADFSMIXXXXXXXXXXXXXX 232
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-----------LAGETIVK 233
G P Y H T+ +Y+ S KL+ E P+ + L G I
Sbjct: 233 XXXGSPDYTDHCHNTNGQYSVTAS--KLSSECVSTPKKVTCFLEKGREGKKYLEGTVIKD 290
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ACG NH+VA+D + V+TWGFGGYGRLGH++ DE VPR V F+ L I+AG
Sbjct: 291 IACGNNHSVAMDMQKRVFTWGFGGYGRLGHQKPDDEPVPRSVKFFEMP--LKGAKTINAG 348
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
S GQ++ WG+ K G+ MYPKP+ DLSGWN+R + N V AD + IS
Sbjct: 349 SSYCMVVTEQGQVFFWGQAKTTGEATMYPKPVQDLSGWNVRSIGCSNHSIVVAADDAIIS 408
Query: 354 WGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLD 410
WG + YGEL YG KSS + KK L+ ++V + CG GHSL I D E L+
Sbjct: 409 WGPSPTYGELAYGEADSKSSTVAKKARPLDNIYVHHLTCGAGHSLFIARDDTEKDKEELE 468
Query: 411 QLDVY 415
+L V+
Sbjct: 469 KLPVF 473
>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
Length = 458
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 243/443 (54%), Gaps = 40/443 (9%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+A L K+ G + G+LL G+T WD +GR++ L NL P R
Sbjct: 25 LAALAPRKL----EGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 80
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I
Sbjct: 81 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVI 140
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+++ E G+ AFG NK GQLG G+ + + PSP + + + +T ACGA
Sbjct: 141 VSAACGRNHTLLLPETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 199
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 200 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 255
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 256 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 315
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P I AG S + G L+ WG + + MYPK + DL GW +R +
Sbjct: 316 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 371
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY H
Sbjct: 372 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSH 431
Query: 396 SLVIV--DRTNVGERLDQLDVYD 416
SLVI + E++ +L Y+
Sbjct: 432 SLVIARDESETEKEKIKKLPEYN 454
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 36/443 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 76 VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R VA+G + H + + VEG+ ++WGRN++GQLGHGD + D P ++ L
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE+G+ AFG NK GQLG G+ + + PSP + L + +T ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D +Y + + ++ Y+ + R IA +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +ACG NH++ +DS+ V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370
Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P A I AG+ S + G L+ WG + D MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG KSS ++V L+G++ V G H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSH 486
Query: 396 SLVIV-DRTNVG-ERLDQLDVYD 416
+LV+ D T E+L +L Y+
Sbjct: 487 TLVVARDETEQDKEKLKKLPEYN 509
>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
Length = 488
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 237/429 (55%), Gaps = 36/429 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 65 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 124
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T
Sbjct: 125 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 184
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
E G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++
Sbjct: 185 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 241
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
+ G P+YGQLGH +D ++ + ++ Y+ + PR +A +T +
Sbjct: 242 YSFGCPEYGQLGHNSDGKFIARAQRIE--YDCELVPRRVAIFIEKTKDGQILPVPNVVVR 299
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I
Sbjct: 300 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 355
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
AG S + G L+ WG + + MYPK + DL GW +R + G V AD S
Sbjct: 356 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 415
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGE 407
ISWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI + E
Sbjct: 416 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKE 475
Query: 408 RLDQLDVYD 416
++ +L Y+
Sbjct: 476 KIKKLPEYN 484
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 234/424 (55%), Gaps = 34/424 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 76 VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R VA+G + H + + VEG+ ++WGRN++GQLGHGD + D P ++ L
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE+G+ AFG NK GQLG G+ + + PSP + L + +T ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D +Y + + ++ Y+ + R IA +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +ACG NH++ +DS+ V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370
Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P A I AG+ S + G L+ WG + D MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG KSS ++V L+G++ G H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQAIMGNSH 486
Query: 396 SLVI 399
+LV+
Sbjct: 487 TLVV 490
>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
Length = 426
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 232/420 (55%), Gaps = 34/420 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 16 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 75
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I
Sbjct: 76 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 135
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE G+ LAFG NK GQLG G+ + + PSP + + + +T ACGA
Sbjct: 136 VSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 194
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 195 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 250
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 251 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 310
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P I AG S + G L+ WG + + MYPK + DL GW +R +
Sbjct: 311 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 366
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY H
Sbjct: 367 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAH 426
>gi|405974201|gb|EKC38864.1| Protein RCC2 [Crassostrea gigas]
Length = 502
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 236/446 (52%), Gaps = 56/446 (12%)
Query: 20 GELLFCGSTCWDAVGRR---KGALD-------------------------------GNLV 45
GELL G T WD VGR+ KG ++ NL
Sbjct: 61 GELLISGGTNWDLVGRKSLPKGGININDCPGQVKSLFGQVKLWVDLSDRATKNAGGPNLW 120
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R+ LVGV IR +GC +CH V + +G+ T+GRN+ GQLG GD +RD PT V
Sbjct: 121 RPHRMSSLVGVKIRSAISGCTACHSVIITADGKAMTFGRNDCGQLGQGDLNRRDLPTEVP 180
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVT 164
L I A G++HT+ +T+ G+ A G NK GQLG G + I P+ + V
Sbjct: 181 LLQGLNIVDACCGKNHTLFLTDKGHVYACGDNKMGQLGLGHQSSTILVPTKISYKGPPVR 240
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA-- 222
A G +F++ ++ + G ++ + G P+YGQLGH TD +Y +S K+++ + RPR
Sbjct: 241 KVAGGGEFSM-MADIRG-NLYSFGCPEYGQLGHNTDGKYFV--TSNKMSFRCETRPRKVN 296
Query: 223 ----------IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
I + + ++ACG NHT +DSK V+TWGFGGYGRLGH E KDE VP
Sbjct: 297 VFIEKARDGHIVPVTDVEVRELACGANHTAIIDSKKRVFTWGFGGYGRLGHAEPKDEMVP 356
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN 332
R + F N + I AGS + T G LYMWG K G+ MYPK + DLSGW
Sbjct: 357 RHLKFFDGPNRGATQ--IHAGSTFTLATNEYGALYMWGINKAVGEAAMYPKLVQDLSGWR 414
Query: 333 LRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+R + N V AD S ISWG + YGEL YG KSS P++V L G ++ SV C
Sbjct: 415 IRSVGCCNKSIVVAADESLISWGPSPTYGELCYGEDKAKSSTTPQEVKTLYGGYIQSVGC 474
Query: 392 GYGHSLVIV--DRTNVGERLDQLDVY 415
GYGH+L+I D ++++++V+
Sbjct: 475 GYGHTLLIFRADSEEDKVKIEKINVF 500
>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
Length = 494
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 227/421 (53%), Gaps = 30/421 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 76 GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 135
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRN++GQLGHGD + + P ++ L+++ I GR+HT+ +TEDG
Sbjct: 136 FITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHTLALTEDGAV 195
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG G+ + + P+ + + ACGA+F++ + ++ + G P
Sbjct: 196 YSFGENKLGQLGQGNQTDAVLTPALISYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 253
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E PR A I + + VACG NH
Sbjct: 254 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGANH 313
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
T+ +DS+ V+TWGFGGYGRLGH EQKDE VPR V +F P I AG S
Sbjct: 314 TLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYAGYQCSF 369
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
+ G L+ WG + + MYPK + DL GW +R + G + AD S ISWG +
Sbjct: 370 AVSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAADESTISWGPSP 429
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVY 415
+GELGYG KSS ++V L+G+++ V GY HSLVI D E+L +L Y
Sbjct: 430 TFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSLVIARQDTQQEQEKLKKLPEY 489
Query: 416 D 416
+
Sbjct: 490 N 490
>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
Length = 479
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 223/420 (53%), Gaps = 36/420 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTR-----LRPLVGVDIRFVAAGCVSCHCVAVD 74
G LL G WD V +R D N T R + +GC + H + +
Sbjct: 72 GVLLISGLVSWDLVAKR----DNNPSKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILIS 127
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
EG Y++GRN GQLG GD R+ P + L + I A GR+H++ VT+ G A
Sbjct: 128 AEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYAC 187
Query: 135 GWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G NK Q G G +I P+ VR + + CGA+F++ L ++ + GLP+YG
Sbjct: 188 GDNKSAQCGLGHTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDC--NGALHSFGLPEYG 245
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHT 241
QLGH TD +Y +S KL+Y + P+ IA ++ IV +CG NHT
Sbjct: 246 QLGHNTDGKYFV--TSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIVDFSCGNNHT 303
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRNNVLPPEAVISAGSVNSSC 299
VA+DSK Y+WGFGG+GRLGH EQ+DE VPR + F Q V + G+ S
Sbjct: 304 VAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGV----RSVHCGATYSLA 359
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG-HAQ 358
G L+M+G+ K G+ MYPKP+ DL+GWN+R + + N + AD S I+WG
Sbjct: 360 VNEHGALFMFGQTKRTGEANMYPKPVQDLTGWNIRSVGTSNTSIVIAADDSLIAWGVSPT 419
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQLDVYD 416
YGELG G KS+A PK+V +EG+++ VA GY H+L++ D T+ V ++L + ++
Sbjct: 420 YGELGTGDI-NKSTARPKEVTRMEGLNITQVAMGYSHTLLLSDDTSDEVKQKLASMPTFN 478
>gi|297282340|ref|XP_002808321.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Macaca mulatta]
Length = 491
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 39/427 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 70 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 129
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 130 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 189
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 190 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 246
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VAC
Sbjct: 247 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACX 304
Query: 238 TNHT---VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISA 292
+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I A
Sbjct: 305 XXXXXXPLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYA 360
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
G S + G L+ WG + + MYPK + DL GW +R + G V AD S I
Sbjct: 361 GYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 420
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERL 409
SWG + +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++
Sbjct: 421 SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKI 480
Query: 410 DQLDVYD 416
+L Y+
Sbjct: 481 KKLPEYN 487
>gi|432959904|ref|XP_004086396.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 homolog [Oryzias
latipes]
Length = 496
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 228/424 (53%), Gaps = 33/424 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P L V + V +G + H +
Sbjct: 75 GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHHYGCLNDVQVSCVVSGPCAAHSL 134
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ +G+ ++WGRN++GQLGHGD + + P ++ L++ I A GR+HT+V+TEDG +
Sbjct: 135 LMTTDGKLWSWGRNDKGQLGHGDTKRIEAPKLIEALAEQVIVSAACGRNHTLVLTEDGTA 194
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG G+ + + P+P+ + +CGA+F++ + ++ + G P
Sbjct: 195 YSFGENKLGQLGQGNQTDAVLSPAPISYNGQPLVKVSCGAEFSMVVDC--KGNLYSFGCP 252
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E PR A I + + VACG NH
Sbjct: 253 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGGNH 312
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAG---SV 295
T+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P A I AG S
Sbjct: 313 TLVLDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGAAQIYAGYQCSF 368
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
G L+ WG + + MYPK + DL GW +R + G + AD S ISWG
Sbjct: 369 AVXXXXXXGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAADESTISWG 428
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG KSS ++V L+G+++ V GY H+L I D ERL +L
Sbjct: 429 PSPTFGELGYGDNKPKSSTTAQEVKTLDGIYIEQVVMGYSHTLAIARQDTPQEEERLKKL 488
Query: 413 DVYD 416
Y+
Sbjct: 489 PEYN 492
>gi|156555775|ref|XP_001602946.1| PREDICTED: protein RCC2 homolog [Nasonia vitripennis]
Length = 486
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 218/410 (53%), Gaps = 33/410 (8%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R VA+G
Sbjct: 67 EGGWGKAGTLLMCGLTNWDIAGRKAPPKGAKANIGRSLWTPHTFKNLNGARVRLVASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H V V + RC +GRN++GQLG GD +RD PT V L + + A GR+HT+ +T
Sbjct: 127 ASHSVIVTEDNRCLVFGRNDKGQLGLGDTKRRDDPTEVEALKGHTVIGAACGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNE-IEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G G N GQ G G I + V+ + CGADF++ L V+G +
Sbjct: 187 SRGIVYGAGANNLGQCGVGKTDAMIITATKVKYSGPPIVKVGCGADFSMIL-DVKGG-LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA------------LAGETIVK 233
+ G P+YG LGH TD +Y +S KLA+ + P+ I L G I
Sbjct: 245 SFGTPEYGVLGHNTDGKYFV--TSTKLAFHFEKAPKRIVIYVERTKDGHITPLDGVEITD 302
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVI 290
+CG H VA+DSK ++WGFGG+GRLGH EQ+DE VPR + + PP +
Sbjct: 303 FSCGYQHVVAIDSKNRSFSWGFGGFGRLGHNEQRDELVPRLIKYLE-----PPNRGAKAV 357
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
GS S G + ++G+ K G+ MYPKP+ DLSGW++RC+ VGAD S
Sbjct: 358 FCGSTFSLVLNVHGTMLLFGQAKRTGEANMYPKPIQDLSGWDIRCVACSQTSVVVGADES 417
Query: 351 CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
I+WG +GELG+G +KSS P +V LEG+++ +V CG H+L+I
Sbjct: 418 VIAWGCSPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGP 366
G N G P +L+G +R + SG + V D+ C+ +G G+LG G
Sbjct: 95 GAKANIGRSLWTPHTFKNLNGARVRLVASGPAASHSVIVTEDNRCLVFGRNDKGQLGLGD 154
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
++ P +V+ L+G VI ACG H+L + R
Sbjct: 155 TKRRDD--PTEVEALKGHTVIGAACGRNHTLFLTSR 188
>gi|242008071|ref|XP_002424836.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508386|gb|EEB12098.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 487
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 230/428 (53%), Gaps = 43/428 (10%)
Query: 6 AEKMVEEETGKEKGGELLFCGSTCWDAVGRR---KGALDG-----NLVSPTRLRPLVGVD 57
+EK+ E+ +G G LL CG WD GR+ K + NL P R+ P
Sbjct: 64 SEKLKEKLSGNV--GVLLICGGVNWDLAGRKVPPKSVKNACLTPINLYIPHRMVP--EFR 119
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VA GC S H V + EG+ T+G QLG GD RD PT+V L +Y I A
Sbjct: 120 VRLVATGCNSAHSVIITEEGKAMTFG-----QLGVGDTKTRDLPTLVESLKEYIIVGAAT 174
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLVSEVTATACGADFTVW 175
GRSHT+ +TE G + G NK+GQLG GS I+ P ++ + CGA+F++
Sbjct: 175 GRSHTLFLTERGTVFSVGDNKNGQLGIGSSTIQTLETPRMIKYKGPPIVKVDCGAEFSMI 234
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG------- 228
L V G S+ + GLP+YGQLGH TD +Y +S KL++ P+ I
Sbjct: 235 LD-VRG-SLHSFGLPEYGQLGHNTDGQYFV--NSNKLSFHCVLAPKKIGMFIEKGKDNHP 290
Query: 229 -----ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRN 281
+ I+ +CG NHTVA+D + +++WGFGGYGRLGH E KDE+VPR + F Q
Sbjct: 291 VPVKVDEILDFSCGQNHTVAIDGRKRLFSWGFGGYGRLGHAEPKDEFVPRLIKFFDSQSR 350
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
V + GS + G +Y++G+ K G+ MYPKPL DLSGWN+R +
Sbjct: 351 GV----KSVYCGSSYTLAINDYGAVYLFGQTKRTGEANMYPKPLQDLSGWNVRSVGCSVT 406
Query: 342 HHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V AD S I+WG + +GELG G ++SS +P +V L+G+H+ VACG H+L I
Sbjct: 407 SIVVAADESVIAWGPSPTHGELGIGEL-RRSSTVPVEVKTLDGIHINQVACGIAHTLFIA 465
Query: 401 DRTNVGER 408
+ E+
Sbjct: 466 RDSTEAEK 473
>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
Length = 475
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 226/428 (52%), Gaps = 33/428 (7%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDG---------NLVSPTRLRPLVGVDIRFVAAGCVS 67
E GE+L CG T W +V RK A G NL P R + LVG+ + V GC S
Sbjct: 52 ENSGEVLICGGTNW-SVNSRKKARKGDEKYENVGKNLFKPHRYKSLVGIKVSRVITGCCS 110
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H + + EG Y+WGRNE GQLGHG++++ D P + L YK+ G++HT+ +TE
Sbjct: 111 NHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTE 170
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASIL 185
+G+ AFG N GQLG G++ + PSP + + +CG +F+V L EG +
Sbjct: 171 NGDVFAFGDNAQGQLGLGNLSTNV-PSPTHIAYKGNPIVDVSCGGEFSVIL-DCEGY-VY 227
Query: 186 NAGLPQYGQLGHGTDNEY----------NTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ G P+YGQLG+ TD +Y N K++ + + + + L I ++
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDVKITSIS 287
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG NH VA+DSK V+TWGFGGYGRLGH EQKDE PR + VF+R + AG
Sbjct: 288 CGNNHVVALDSKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAG--RGAVQVYAGYS 345
Query: 296 NSSCTAGGGQLYMWGKL--KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
S G WG ++ + MYPKPL DL GW +R + G H V AD S I
Sbjct: 346 FSIALNEMGSTMFWGLQGSISSRETTMYPKPLPDLQGWEIRSIGCGYRHTVVAADESVIV 405
Query: 354 WGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER--LD 410
WG GELG G +KSSA P + + + V+CG H+L+I + ++ LD
Sbjct: 406 WGTGTSNGELGLGE-SRKSSANPDLMKSASNLFIQRVSCGQTHTLMIARNKDEKDQAALD 464
Query: 411 QLDVYDGK 418
++ +YD K
Sbjct: 465 EIPLYDPK 472
>gi|350418381|ref|XP_003491841.1| PREDICTED: protein RCC2 homolog [Bombus impatiens]
Length = 486
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 31/426 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R VA+G
Sbjct: 67 EGGWGKPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLVASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + V + RC +GRN++GQLG GD +RD PT V+ L + + A GR+HT+ +T
Sbjct: 127 ASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G A G NK GQ G G S + + V+ + CGADF++ L G +
Sbjct: 187 SRGIVFAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGADFSMILDIKGG--LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVA 235
+ G P+YG LGH TD +Y ++ + +E P+ RA + L I +
Sbjct: 245 SFGSPEYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFS 304
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISA 292
CG +HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + + PP I
Sbjct: 305 CGHHHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPTRGVRAIYC 359
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS S G M+G+ K G+ MYPKP+ DLSGW +RC+ V AD S I
Sbjct: 360 GSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVI 419
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RL 409
+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L+I + E ++
Sbjct: 420 AWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMICRDESEEEKTKI 478
Query: 410 DQLDVY 415
++L VY
Sbjct: 479 NKLQVY 484
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 233/436 (53%), Gaps = 31/436 (7%)
Query: 5 EAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGV 56
+ ++ ++ E K KG +LL G+T WD +GR++ L NL P R L V
Sbjct: 63 DVKEKIKLEVPKVKG-QLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDV 121
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+ V +G + H + + EG+ ++WGRN++GQLGHGD + + P ++ L + I A
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVW 175
GR+HT+ +TE+G FG NK GQLG G+ + + P+ ++ + ACGA+F++
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMI 241
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALA 227
+ ++ + G P+YGQLGH +D ++ + ++ E PR AI L
Sbjct: 242 VDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLP 299
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+V VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 300 VPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FP 355
Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I G S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 356 GRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 415
Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-- 400
V AD S ISWG + +GELGYG KSS ++V L+G++ V GY HSLVI
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
Query: 401 DRTNVGERLDQLDVYD 416
D E+L +L Y+
Sbjct: 476 DTEQEKEKLKKLPEYN 491
>gi|340726568|ref|XP_003401628.1| PREDICTED: protein RCC2 homolog [Bombus terrestris]
Length = 486
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 226/426 (53%), Gaps = 31/426 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R VA+G
Sbjct: 67 EGGWGKPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLVASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + V + RC +GRN++GQLG GD +RD PT V+ L + + A GR+HT+ +T
Sbjct: 127 ASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G A G NK GQ G G S + + V+ + CGADF++ L G +
Sbjct: 187 SRGIVFAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGADFSMILDIKGG--LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVA 235
+ G P+YG LGH TD +Y ++ + +E P+ RA + L I +
Sbjct: 245 SFGSPEYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFS 304
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISA 292
CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + + PP I
Sbjct: 305 CGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPTRGVRAIYC 359
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS S G M+G+ K G+ MYPKP+ DLSGW +RC+ V AD S I
Sbjct: 360 GSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVI 419
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RL 409
+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L+I + E ++
Sbjct: 420 AWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMICRDESEEEKTKI 478
Query: 410 DQLDVY 415
++L VY
Sbjct: 479 NKLQVY 484
>gi|383852547|ref|XP_003701788.1| PREDICTED: protein RCC2 homolog [Megachile rotundata]
Length = 486
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 228/426 (53%), Gaps = 31/426 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R +A+G
Sbjct: 67 EGGWGKPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLIASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + V + RC +GRN++GQLG GD +RD PT V+ L + + A GR+HT+ +T
Sbjct: 127 ASHSIIVTEDNRCLAFGRNDKGQLGVGDMKRRDEPTEVTALKGHTVIAASCGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G A G NK GQ G G S + + V+ + CGA+F++ L G +
Sbjct: 187 SRGIVFAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGAEFSMILDIKGG--LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVA 235
+ G P+YG LGH TD +Y ++ + +E P+ RA + L I +
Sbjct: 245 SFGSPEYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYVERAKDGHVTPLDRVEITDFS 304
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--- 292
CG +HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + + PP + A
Sbjct: 305 CGHHHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPNRGVRAVYC 359
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS S G M+G+ K G+ MYPKP+ DLSGW +RC+ V AD S I
Sbjct: 360 GSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVI 419
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RL 409
+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L+I + E ++
Sbjct: 420 AWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMICRDESEDEKAKI 478
Query: 410 DQLDVY 415
++L VY
Sbjct: 479 NKLQVY 484
>gi|380023928|ref|XP_003695761.1| PREDICTED: protein RCC2 homolog [Apis florea]
Length = 486
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 31/426 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R VA+G
Sbjct: 67 EGGWGKPGTLLMCGLTNWDMAGRKAPPKGVKANVGRSLWTPHTFKNLNGSRVRLVASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + V + RC +GRN++GQLG GD +RD PT V+ L + + A GR+HT+ +T
Sbjct: 127 ASHSIIVTEDNRCLAFGRNDKGQLGIGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G A G NK GQ G G S I + V+ + CGA+F++ L G +
Sbjct: 187 SRGIVFAAGDNKLGQCGVGKSDACIISATKVKYSGPPIVKVGCGAEFSMILDIKGG--LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVA 235
+ G P+YG LGH TD +Y ++ + +E P+ RA + L I +
Sbjct: 245 SFGSPEYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFS 304
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--- 292
CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + + PP + A
Sbjct: 305 CGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPSRGVRAVYC 359
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS S G M+G+ K G+ MYPKP+ DLSGW +RC+ V AD S I
Sbjct: 360 GSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVI 419
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RL 409
+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L+I + E ++
Sbjct: 420 AWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMICRDESEEEKAKI 478
Query: 410 DQLDVY 415
++L VY
Sbjct: 479 NKLQVY 484
>gi|66562328|ref|XP_392946.2| PREDICTED: protein RCC2 homolog [Apis mellifera]
Length = 486
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 31/426 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
E G K G LL CG T WD GR+ K + +L +P + L G +R VA+G
Sbjct: 67 EGGWGKPGTLLMCGLTNWDMAGRKAPPKGVKANIGRSLWTPHTFKNLNGSRVRLVASGPA 126
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ H + V + RC +GRN++GQLG GD +RD PT V+ L + + A GR+HT+ +T
Sbjct: 127 ASHSIIVTEDNRCLAFGRNDKGQLGIGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLT 186
Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G A G NK GQ G G S I + V+ + CGA+F++ L G +
Sbjct: 187 SRGIVFAAGDNKLGQCGIGKSDACIISATKVKYSGPPIVKVGCGAEFSMILDIKGG--LH 244
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVA 235
+ G P+YG LGH TD +Y ++ + +E P+ RA + L I +
Sbjct: 245 SFGSPEYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFS 304
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--- 292
CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + + PP + A
Sbjct: 305 CGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPSRGVRAVYC 359
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS S G M+G+ K G+ MYPKP+ DLSGW +RC+ V AD S I
Sbjct: 360 GSTYSIAINIHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVI 419
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RL 409
+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L+I + E ++
Sbjct: 420 AWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMICRDESEEEKTKI 478
Query: 410 DQLDVY 415
++L VY
Sbjct: 479 NKLQVY 484
>gi|195434691|ref|XP_002065336.1| GK14718 [Drosophila willistoni]
gi|194161421|gb|EDW76322.1| GK14718 [Drosophila willistoni]
Length = 486
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 229/425 (53%), Gaps = 34/425 (8%)
Query: 3 ELEAEKMVEEE---TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP------- 52
EL+ + E+ T ++ G+LL G WD G+R + + T++RP
Sbjct: 56 ELDPPSKLPEDLLATMEKTPGQLLVAGMVTWDLTGKR------DRKNVTKVRPNLYSFHR 109
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYK 111
R+VA+G + H + ++++ + +GRN GQLG I+ ++PT++ L +
Sbjct: 110 FTDEKYRYVASGPAAAHSIIINMDRKALGFGRNPSGQLGLSQDIKLVEKPTLIPALEQLN 169
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGA 170
+ +A GR HT+ +T+ G A G NK GQ G G+ I P+P+ + CGA
Sbjct: 170 VVQAACGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRVGCGA 229
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA-------- 222
+F+V L ++G ++ GLP+YGQLGH TD +Y + + +E P+
Sbjct: 230 EFSVILD-IKG-NLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKE 287
Query: 223 --IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ + G IV ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F
Sbjct: 288 GHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDA 347
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
+ GS S G LY++G+ K G+ MYPKP+ DLSGWN+ + N
Sbjct: 348 QGR--GARSVFCGSTFSLIVNELGLLYLFGQNKKTGEANMYPKPVQDLSGWNITAIGCAN 405
Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ AD + I+WG + +GELG G + QKSS +PK+V ++G+ + VA GY H+ ++
Sbjct: 406 TSIMISADDTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVAMGYSHTALL 464
Query: 400 VDRTN 404
VD T+
Sbjct: 465 VDTTH 469
>gi|195030320|ref|XP_001988016.1| GH10796 [Drosophila grimshawi]
gi|193904016|gb|EDW02883.1| GH10796 [Drosophila grimshawi]
Length = 491
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 227/417 (54%), Gaps = 43/417 (10%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF-------VAAGCV 66
T ++ G+LL G WD G+R + + T++RP + RF VA+G
Sbjct: 75 TLEKTPGQLLLAGMVTWDLTGKR------DRKNVTKVRPNLFSFHRFTDEKYRSVASGPA 128
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
S H + ++++ + +GRN GQLG I+ ++P+++ L + I +A AGR HT+ +
Sbjct: 129 SAHTILINMDRKALGFGRNPSGQLGLSSDIKLVEKPSLIPALEQLNIVQAAAGRHHTLFL 188
Query: 126 TEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
T+ G A G NK GQ G G+ N P+P+ + CGA+F+V L ++G ++
Sbjct: 189 TDTGTVYACGENKSGQCGVGNAHPNVFAPTPINYRGPPIIRIGCGAEFSVILD-IKG-NL 246
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
GLP+YGQLGH TD +Y + + +E P+ + + G IV
Sbjct: 247 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 306
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEA 288
ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+
Sbjct: 307 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS------- 359
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
I GS S G LY++G+ K G+ MYPKP+ DL+GWN+ + N + AD
Sbjct: 360 -IYCGSTFSLIINELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISAD 418
Query: 349 SSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ I+WG + +GELG G + QKSS +PK+V ++G+ + V+ GY H+ ++VD T+
Sbjct: 419 DTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVSMGYSHTALLVDTTH 474
>gi|307189423|gb|EFN73833.1| Protein RCC2-like protein [Camponotus floridanus]
Length = 491
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 229/440 (52%), Gaps = 40/440 (9%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
M EL A E G K G LL CG T W+ GR+ K + +L +P + L
Sbjct: 65 MPELPAP-----EGGWGKPGVLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 119
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
IR +A+G + H + V + +C +GRN++GQLG GD +RD PT V L + I
Sbjct: 120 NARIRLIASGPAASHSIIVTEDDKCLAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTIIG 179
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
A GR+HT+ +T G A G NK GQ G G +N+ + S V+ + CGA+
Sbjct: 180 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGVG--KNDPCVVTASKVKYSGPPIVKVGCGAE 237
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
F++ L G + + G P+YG LGH TD +Y ++ + YE P+ + G+
Sbjct: 238 FSMILDIKGG--LHSFGCPEYGALGHNTDGKYFVTNTKMAFHYEKVPKRIVLYVERGKDG 295
Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + +
Sbjct: 296 HAIPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 353
Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
PP + A GS S G M+G+ K G+ MYPKP+ DLSGW +RC+
Sbjct: 354 ---PPSRGVRAVYCGSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 410
Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
V AD S I+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L
Sbjct: 411 SQTSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 469
Query: 398 VIVDRTNVGER--LDQLDVY 415
+I ER +++L VY
Sbjct: 470 MICRDDTEEERAKINKLQVY 489
>gi|332021353|gb|EGI61727.1| Protein RCC2-like protein [Acromyrmex echinatior]
Length = 488
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 229/440 (52%), Gaps = 40/440 (9%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
M EL A E G K G LL CG T W+ GR+ K + +L +P + L
Sbjct: 62 MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 116
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+R +A+G + H + V + RC +GRN++GQLG GD +RD PT V L + +
Sbjct: 117 DAKVRLIASGPAASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTVIG 176
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
A GR+HT+ +T G A G NK GQ G G +N+ + + V+ + CGA+
Sbjct: 177 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGIG--KNDPCVVTATKVKYSGPPIVKVGCGAE 234
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
F++ L G + + G P+YG LGH TD +Y ++ + YE P+ + G+
Sbjct: 235 FSMILDIKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKAPKRIVLYVERGKDG 292
Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + +
Sbjct: 293 HAMPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 350
Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
PP + A GS S G M+G+ K G+ MYPKP+ DLSGW +RC+
Sbjct: 351 ---PPSRGVRAVHCGSTYSIAINIHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 407
Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
V AD S I+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L
Sbjct: 408 SQTSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 466
Query: 398 VIVDRTNVGER--LDQLDVY 415
+I ER +++L VY
Sbjct: 467 MICRDDTEEERTKINKLQVY 486
>gi|125986855|ref|XP_001357190.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
gi|195146500|ref|XP_002014222.1| GL19056 [Drosophila persimilis]
gi|54645520|gb|EAL34258.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
gi|194106175|gb|EDW28218.1| GL19056 [Drosophila persimilis]
Length = 486
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 43/417 (10%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCV 66
T ++ G+LL G WD G+R + + T++RP R+VA+G
Sbjct: 70 TLEKTPGQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPS 123
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
+ H + ++++ + +GRN GQLG ++ ++PTI+ L + I +A GR HT+ +
Sbjct: 124 AAHTILINMDRKALGFGRNPSGQLGFSPDVKLVEKPTIIPALEQLNIVQASVGRHHTLFL 183
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
T+ G A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++
Sbjct: 184 TDTGTVYALGENKSGQCGVGNAHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-NL 241
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
GLP+YGQLGH TD +Y + + +E P+ + + G IV
Sbjct: 242 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 301
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEA 288
ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+
Sbjct: 302 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDTQGRGGRS------- 354
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+ GS S G LY++G+ K G+ MYPKP+ DLSGWN+ + N + AD
Sbjct: 355 -VFCGSTFSLIVNELGLLYLFGQNKKTGEANMYPKPVQDLSGWNITDLGCANTSIMISAD 413
Query: 349 SSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ I+WG + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+
Sbjct: 414 DTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469
>gi|322803212|gb|EFZ23233.1| hypothetical protein SINV_03602 [Solenopsis invicta]
Length = 488
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 230/440 (52%), Gaps = 40/440 (9%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
M EL A E G K G LL CG T W+ GR+ K + +L +P + L
Sbjct: 62 MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 116
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G +R +A+G + H + V + +C +GRN++GQLG GD +RD PT V L + +
Sbjct: 117 GARVRLIASGPAASHSIIVTEDNKCMAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTVIG 176
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
A GR+HT+ +T G A G NK GQ G G +N+ + + V+ + CGA+
Sbjct: 177 AFCGRNHTLFLTSRGIVFAAGDNKLGQCGVG--KNDPCIMTATKVKYSGPPIVKVGCGAE 234
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
F++ L G + + G P+YG LGH TD +Y ++ + YE P+ + G+
Sbjct: 235 FSMILDLKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKVPKRIVLYVERGKDG 292
Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + +
Sbjct: 293 HATPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 350
Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
PP + A GS S G M+G+ K G+ MYPKP+ DLSGW +RC+
Sbjct: 351 ---PPSRGVRAVHCGSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 407
Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
V AD S I+WG + +GELG+G +KSS P +V LEG+++ +V CG H+L
Sbjct: 408 SQTSVVVAADDSVIAWGPSPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 466
Query: 398 VIVDRTNVGER--LDQLDVY 415
+I ER +++L VY
Sbjct: 467 MICRDDTEEERAKINKLQVY 486
>gi|194860035|ref|XP_001969502.1| GG23921 [Drosophila erecta]
gi|190661369|gb|EDV58561.1| GG23921 [Drosophila erecta]
Length = 487
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 43/417 (10%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCV 66
T ++ G++L G WD G+R + + T++RP R+VA+G
Sbjct: 71 TLEKTAGQMLVAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPS 124
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
+ H + ++++ + +GRN GQLG I+ ++PTI+ L + I +A GR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
T+ G A G NK GQ G G+ I P+P+ + CGA+F+V L ++G S+
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SL 242
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
GLP+YGQLGH TD +Y + + +E P+ + + G IV
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 302
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEA 288
ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS------- 355
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+ GS S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD
Sbjct: 356 -VFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISAD 414
Query: 349 SSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ I+WG + +GELG G + QKSS +PK+V L+ + + V GY H++++VD T+
Sbjct: 415 DTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
>gi|195342914|ref|XP_002038043.1| GM18595 [Drosophila sechellia]
gi|195576918|ref|XP_002078320.1| GD23381 [Drosophila simulans]
gi|194132893|gb|EDW54461.1| GM18595 [Drosophila sechellia]
gi|194190329|gb|EDX03905.1| GD23381 [Drosophila simulans]
Length = 487
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 222/414 (53%), Gaps = 37/414 (8%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
T ++ G++L G WD G+R + NL S R R+VA+G + H
Sbjct: 71 TLEKTPGQMLVAGMVTWDLTGKRDRKNVAKVRPNLYSFHRF---TEEKYRYVASGPSAAH 127
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ ++++ + +GRN GQLG I+ ++PTI+ L + I +A GR HT+ +T+
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT 187
Query: 129 GNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G A G NK GQ G G+ I P+P+ + CGA+F+V L ++G S+
Sbjct: 188 GTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SLHTF 245
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACG 237
GLP+YGQLGH TD +Y + + +E P+ + + G IV ACG
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACG 305
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVIS 291
NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+ +
Sbjct: 306 NNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS--------VF 357
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
GS S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD +
Sbjct: 358 CGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTL 417
Query: 352 ISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
I+WG + +GELG G + QKSS +PK+V L+ + + V GY H++++VD T+
Sbjct: 418 IAWGASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
>gi|195473703|ref|XP_002089132.1| GE25855 [Drosophila yakuba]
gi|194175233|gb|EDW88844.1| GE25855 [Drosophila yakuba]
Length = 487
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 222/414 (53%), Gaps = 37/414 (8%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
T ++ G++L G WD G+R + NL S R R+VA+G + H
Sbjct: 71 TLEKTPGQMLVAGMVTWDLTGKRDRKNVAKVRPNLYSFHRF---TEEKYRYVASGPSAAH 127
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ ++++ + +GRN GQLG I+ ++PTI+ L + I +A GR HT+ +T+
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT 187
Query: 129 GNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G A G NK GQ G G+ I P+P+ + CGA+F+V L ++G S+
Sbjct: 188 GTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SLHTF 245
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACG 237
GLP+YGQLGH TD +Y + + +E P+ + + G IV ACG
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACG 305
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVIS 291
NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+ +
Sbjct: 306 NNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS--------VF 357
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
GS S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD +
Sbjct: 358 CGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTL 417
Query: 352 ISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
I+WG + +GELG G + QKSS +PK+V L+ + + V GY H++++VD T+
Sbjct: 418 IAWGASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
>gi|20129257|ref|NP_608985.1| CG9135, isoform A [Drosophila melanogaster]
gi|24582121|ref|NP_723150.1| CG9135, isoform B [Drosophila melanogaster]
gi|7297063|gb|AAF52332.1| CG9135, isoform A [Drosophila melanogaster]
gi|16185397|gb|AAL13911.1| LD39815p [Drosophila melanogaster]
gi|22945734|gb|AAN10577.1| CG9135, isoform B [Drosophila melanogaster]
gi|116812093|emb|CAL26239.1| CG9135 [Drosophila melanogaster]
gi|116812095|emb|CAL26240.1| CG9135 [Drosophila melanogaster]
gi|116812097|emb|CAL26241.1| CG9135 [Drosophila melanogaster]
gi|116812099|emb|CAL26242.1| CG9135 [Drosophila melanogaster]
gi|116812101|emb|CAL26243.1| CG9135 [Drosophila melanogaster]
gi|116812103|emb|CAL26244.1| CG9135 [Drosophila melanogaster]
gi|116812105|emb|CAL26245.1| CG9135 [Drosophila melanogaster]
gi|116812107|emb|CAL26246.1| CG9135 [Drosophila melanogaster]
gi|116812109|emb|CAL26247.1| CG9135 [Drosophila melanogaster]
gi|116812111|emb|CAL26248.1| CG9135 [Drosophila melanogaster]
gi|220946256|gb|ACL85671.1| CG9135-PA [synthetic construct]
gi|220955942|gb|ACL90514.1| CG9135-PA [synthetic construct]
gi|223967143|emb|CAR93302.1| CG9135-PA [Drosophila melanogaster]
gi|223967145|emb|CAR93303.1| CG9135-PA [Drosophila melanogaster]
gi|223967147|emb|CAR93304.1| CG9135-PA [Drosophila melanogaster]
gi|223967149|emb|CAR93305.1| CG9135-PA [Drosophila melanogaster]
gi|223967151|emb|CAR93306.1| CG9135-PA [Drosophila melanogaster]
gi|223967153|emb|CAR93307.1| CG9135-PA [Drosophila melanogaster]
gi|223967155|emb|CAR93308.1| CG9135-PA [Drosophila melanogaster]
gi|223967157|emb|CAR93309.1| CG9135-PA [Drosophila melanogaster]
gi|223967159|emb|CAR93310.1| CG9135-PA [Drosophila melanogaster]
gi|223967161|emb|CAR93311.1| CG9135-PA [Drosophila melanogaster]
gi|223967163|emb|CAR93312.1| CG9135-PA [Drosophila melanogaster]
gi|223967165|emb|CAR93313.1| CG9135-PA [Drosophila melanogaster]
Length = 487
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 43/417 (10%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCV 66
T ++ G++L G WD G+R + + T++RP R+VA+G
Sbjct: 71 TLEKTPGQMLIAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPS 124
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
+ H + ++++ + +GRN GQLG I+ ++PTI+ L + I +A GR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
T+ G A G NK GQ G G+ I P+P+ + CGA+F+V L ++G S+
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SL 242
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
GLP+YGQLGH TD +Y + + +E P+ + + G IV
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 302
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEA 288
ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS------- 355
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+ GS S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD
Sbjct: 356 -VFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISAD 414
Query: 349 SSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ I+WG + +GELG G + QKSS +PK+V L+ + + V GY H++++VD T+
Sbjct: 415 DTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
>gi|195385523|ref|XP_002051454.1| GJ15738 [Drosophila virilis]
gi|194147911|gb|EDW63609.1| GJ15738 [Drosophila virilis]
Length = 487
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 225/417 (53%), Gaps = 43/417 (10%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF-------VAAGCV 66
T ++ G+LL G WD G+R + + T++RP + RF VA+G
Sbjct: 71 TLEKTPGQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRSVASGPT 124
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
+ H + ++++ + +GRN GQLG I+ ++PTI+ L + I +A AGR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLVEKPTIIPALEQLNIVQAAAGRHHTLFL 184
Query: 126 TEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
T+ G A G NK GQ G G+ N P+P+ + CGA+F+V L ++G ++
Sbjct: 185 TDTGTVYACGENKSGQCGVGNAHPNIFTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NL 242
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
GLP+YGQLGH TD +Y + + +E P+ + + G IV
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKRVVLYIEKSKEGHVTPVDGVQIVDF 302
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEA 288
ACG NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDAQGRGGRS------- 355
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+ GS S G LY++G+ K G+ MYPKP+ DL+GWN+ + N + AD
Sbjct: 356 -VYCGSTFSLIINELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISAD 414
Query: 349 SSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ I+WG + +GELG G + QKSS +PK+V ++ + + V GY H+ ++VD T+
Sbjct: 415 DTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKMDNIKIPQVTMGYSHTALLVDTTH 470
>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
Length = 494
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 222/421 (52%), Gaps = 30/421 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 76 GQLLVFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 135
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ L+ + + A GR+HT+ +T++G+
Sbjct: 136 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDNGSV 195
Query: 132 LAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG S + P+ + + ACGA+F++ + ++ + G P
Sbjct: 196 YSFGENKLGQLGQCSQTYAVLSPALISYDGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 253
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E PR AI + + VACG NH
Sbjct: 254 EYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVVRDVACGANH 313
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
T+ +DS+ V++WGFGGYGRLGH EQKDE VPR + +F P I G S
Sbjct: 314 TLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLIKLFD----FPGRGASQIYTGYQCSF 369
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQ 358
G L WG + + MYPK + DL GW +R + G + AD S ISWG +
Sbjct: 370 AVTENGSLSFWGVTNTSRESTMYPKAVQDLGGWKIRSLACGKSSIILAADESTISWGPSP 429
Query: 359 Y-GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVY 415
GELGYG KSS ++V L+G++V V GY HSLVI D ERL +L Y
Sbjct: 430 TCGELGYGDNKPKSSTTAQEVKTLDGVYVEKVMMGYSHSLVIARQDTEQEKERLKKLPEY 489
Query: 416 D 416
+
Sbjct: 490 N 490
>gi|269973065|emb|CBE67077.1| CG9135-PA [Drosophila phaeopleura]
Length = 486
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKFDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 222/421 (52%), Gaps = 30/421 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 78 GQLLIFGATNWDLIGRKEVPKAQAAFRNLGQNLWGPHRYGCLNDVQVSSVVSGPCAAHSL 137
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ L+ + A GR+HT+ +TE G +
Sbjct: 138 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTA 197
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG G+ + + P+ ++ + ACGA+F++ + ++ + G P
Sbjct: 198 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 255
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E R I + + VACG NH
Sbjct: 256 EYGQLGHNSDGKFIARAQRIEFDCETIARRVTIFIEKSKDGQVTPVPNVVVRDVACGGNH 315
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
T+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I G S
Sbjct: 316 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 371
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
G L+ WG + + MYPK + DL GW +R + G + AD S ISWG +
Sbjct: 372 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 431
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVY 415
+GELGYG KSS ++V L+G++ V GY HSLVI D E+L +L Y
Sbjct: 432 TFGELGYGDNKAKSSTTAQEVKSLDGVYAEQVVMGYAHSLVIARQDTPQEQEKLKKLPEY 491
Query: 416 D 416
+
Sbjct: 492 N 492
>gi|195115491|ref|XP_002002290.1| GI17306 [Drosophila mojavensis]
gi|193912865|gb|EDW11732.1| GI17306 [Drosophila mojavensis]
Length = 486
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 223/414 (53%), Gaps = 37/414 (8%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
T ++ G+LL G WD G+R + NL S R + R+ A+G + H
Sbjct: 70 TLEKTPGQLLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTDEM---YRYAASGPAAAH 126
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ ++++ + +GRN GQLG ++ ++PT++ L + I + AGR HT+ +T+
Sbjct: 127 TILINMDRKALGFGRNPSGQLGLSQDMKLVEKPTLIPALEQLNIVQVAAGRHHTLFLTDT 186
Query: 129 GNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G A G NK GQ G G+ N P+P+ + CGA+F+V L ++G ++
Sbjct: 187 GTVYACGENKSGQCGVGNAHPNIFTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTF 244
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACG 237
GLP+YGQLGH TD +Y + + +E P+ + + G IV ACG
Sbjct: 245 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACG 304
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVIS 291
NHTVA+DSK VY+WGFGG+GRLGH E KDE VPR + F R+ +
Sbjct: 305 NNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDSQGRGGRS--------VY 356
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
GS S G LY++G+ K G+ MYPKP+ DL+GWN+ + N + AD +
Sbjct: 357 CGSTFSLIINELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISADDTL 416
Query: 352 ISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
I+WG + +GELG G + QKSS +PK+V ++G+ + V GY H++++VD T+
Sbjct: 417 IAWGASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTVLLVDTTH 469
>gi|269972838|emb|CBE66999.1| CG9135-PA [Drosophila ananassae]
Length = 486
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKYDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|269972828|emb|CBE66994.1| CG9135-PA [Drosophila ananassae]
gi|269972834|emb|CBE66997.1| CG9135-PA [Drosophila ananassae]
gi|269972836|emb|CBE66998.1| CG9135-PA [Drosophila ananassae]
gi|269972840|emb|CBE67000.1| CG9135-PA [Drosophila ananassae]
gi|269972842|emb|CBE67001.1| CG9135-PA [Drosophila ananassae]
gi|269972915|emb|CBE67002.1| CG9135-PA [Drosophila ananassae]
gi|269972917|emb|CBE67003.1| CG9135-PA [Drosophila ananassae]
Length = 486
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKYDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|269973011|emb|CBE67050.1| CG9135-PA [Drosophila atripex]
Length = 486
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKYDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|194760185|ref|XP_001962322.1| GF14497 [Drosophila ananassae]
gi|190616019|gb|EDV31543.1| GF14497 [Drosophila ananassae]
gi|269972830|emb|CBE66995.1| CG9135-PA [Drosophila ananassae]
Length = 486
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G+ I P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKYDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|269972832|emb|CBE66996.1| CG9135-PA [Drosophila ananassae]
Length = 486
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 227/424 (53%), Gaps = 45/424 (10%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
G+LL G WD G+R + + T++RP R+VA+G + H +
Sbjct: 76 GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++ + +GRN GQLG I+ ++PTI+ L + + +A GR HT+ +T+ G
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189
Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
A G NK GQ G G S N P+P+ + CGA+F+V L ++G ++ GLP
Sbjct: 190 YACGENKSGQCGVGNSHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
+YGQLGH TD +Y + + +E P+ + + G IV ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ------RNNVLPPEAVISAGS 294
TVA+DSK VY+WGFGG+GRLGH E KDE VPR + + R+ + GS
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGRGGRS--------VFCGS 359
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
S G L+++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+W
Sbjct: 360 TFSLVVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAW 419
Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQ 411
G + +GELG G + QKSS +PK+V ++G+ + V GY H+ ++VD T+ ++ D+
Sbjct: 420 GASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKYDK 478
Query: 412 LDVY 415
L Y
Sbjct: 479 LSEY 482
>gi|307214889|gb|EFN89757.1| Protein RCC2-like protein [Harpegnathos saltator]
Length = 486
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 225/438 (51%), Gaps = 36/438 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
M EL A E G K G LL CG T W+ GR+ K + +L +P + L
Sbjct: 60 MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 114
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+R +A+G + H + V + RC +G+N++GQLG GD +RD PT V L + +
Sbjct: 115 NARVRLIASGPAASHNIIVTEDDRCLVFGKNDKGQLGIGDTKRRDEPTEVEALKGHTVIG 174
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFT 173
A GR+HT+ +T G A G NK GQ G G S + + V+ + CGA+F+
Sbjct: 175 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGVGKSDACIVTATKVKYSGPPIVKIGCGAEFS 234
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------I 223
+ L G + + G P+YG LGH TD +Y ++ + YE P+ +
Sbjct: 235 MILDIKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKVPKRIVLYVERTKDGHV 292
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L I +CG HTVA+DSK ++WGFGG GRLGH EQ+DE VPR + +
Sbjct: 293 TPLDRVEITDFSCGHYHTVAIDSKSRAFSWGFGGVGRLGHNEQRDELVPRLIKFLE---- 348
Query: 284 LPPE---AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
PP + GS S G M+G+ K G+ MYPKP+ DLSGW +RC+
Sbjct: 349 -PPNRGVRTVHCGSTYSIAINVHGFALMFGQSKRTGEANMYPKPIQDLSGWEIRCVGCSQ 407
Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V AD S I+WG + +GELG+G +KSS P +V LEG++V +V CG H+L+I
Sbjct: 408 TSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYVTAVTCGMSHTLMI 466
Query: 400 V--DRTNVGERLDQLDVY 415
D ++++L VY
Sbjct: 467 CRDDTEEEKAKINKLQVY 484
>gi|157119218|ref|XP_001653306.1| regulator of chromosome condensation [Aedes aegypti]
gi|108875404|gb|EAT39629.1| AAEL008575-PA [Aedes aegypti]
Length = 478
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 233/426 (54%), Gaps = 45/426 (10%)
Query: 4 LEAEKMVEE--ETGKEKGGELLFCGSTCWDAVGRR---KGALDGNLVSPTRLRPLVGVDI 58
+ EK+ E+ +T ++ G+LL G WD GR+ KG T++RP +
Sbjct: 51 INQEKLPEDLLKTYDKEPGKLLMAGMVTWDMTGRKAPSKGT--------TKIRPALNSFH 102
Query: 59 RFVA-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
RF + +GC S H V + ++ + +GRN+ GQLG + ++PT V+ L +
Sbjct: 103 RFTSETYRSAVSGCSSAHSVLITLDRKALAFGRNQFGQLGQSELRTFEKPTPVTGLEEVN 162
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGA 170
+ +A GR+HT+ +++ G A G NK GQ G G+ + I + + + + ACGA
Sbjct: 163 VIQAACGRNHTLFLSDTGVVYACGDNKSGQCGVGNTQPTILKATRLNYAGPPIIKVACGA 222
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ L ++G ++ + GLP+YGQLGH T+ +Y +S K+++ + P+ I +T
Sbjct: 223 EFSMILD-IKG-NVYSFGLPEYGQLGHNTEGKYFV--TSTKMSFHFETSPKKIVLYVEKT 278
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
IV +CG NHTVA+DSK ++WGFGG GRLGH EQKDE VPR + F
Sbjct: 279 KDGHVTPIDDVKIVDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPRLIKFF 338
Query: 279 --QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
Q VL + GS S G LY++G+ K G+ MYPKP+ DL+GWN+ +
Sbjct: 339 DIQNRKVLR----VFCGSSFSLAITDIGALYLFGQNKKTGEANMYPKPVQDLAGWNITSI 394
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
N + AD S ISWG + YGELG G KSS+ PK V EGM + V+ GY H
Sbjct: 395 GVANTSIVISADDSLISWGASPTYGELGLGDL-IKSSSTPKTVSRCEGMKIPQVSMGYSH 453
Query: 396 SLVIVD 401
+L++V+
Sbjct: 454 TLLLVN 459
>gi|390370006|ref|XP_001201663.2| PREDICTED: protein RCC2 homolog, partial [Strongylocentrotus
purpuratus]
Length = 412
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 214/426 (50%), Gaps = 56/426 (13%)
Query: 20 GELLFCGSTCWDAVGRRK---GALDGN------------LVSPTRLRPLVGVDIRFVAAG 64
G LLF G T WD +GR K A GN V PT + D V+A
Sbjct: 9 GTLLFSGGTNWDLIGRHKLTKAAASGNDREQLGHGEEYRRVVPTMVEG--SEDHHMVSAA 66
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C RN+R QLGHGD +RD PT+V L + I A GR+HT+
Sbjct: 67 C------------------RNDREQLGHGDDYRRDVPTLVEGLEDHHIVTAACGRNHTMC 108
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+T+DG AFG N+ GQ G G + + P S + ACGADF++ L
Sbjct: 109 LTDDGTVFAFGDNRMGQCGIGVQSSSVGTPCKPNYYGSPIVKVACGADFSMILDC--KGV 166
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-----------LAGETIV 232
I + G +Y QLGH T+ +Y+ S KL+ E P+ + L G I
Sbjct: 167 IHSFGSQEYSQLGHNTNGQYSVTAS--KLSSECVSTPKKVTCFLEKGREGKKYLEGTVIK 224
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+ACG NH+VA+D + V+TWGFGGYGRLGH++ DE VPR V F+ L I+A
Sbjct: 225 DIACGNNHSVAMDMQKRVFTWGFGGYGRLGHQKPDDEPVPRSVKFFEMP--LKGAKTINA 282
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
GS GQ++ WG+ K G+ MYPKP+ DLSGWN+R + N V AD + I
Sbjct: 283 GSSYCMVVTEQGQVFFWGQAKTTGEATMYPKPVQDLSGWNVRSIGCSNHSIVVAADDAII 342
Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERL 409
SWG + YGEL YG KSS + KK L+ ++V + CG GHSL I D E L
Sbjct: 343 SWGPSPTYGELAYGEADSKSSTVAKKARPLDNIYVHHLTCGAGHSLFIARDDTEKDKEEL 402
Query: 410 DQLDVY 415
++L V+
Sbjct: 403 EKLPVF 408
>gi|299471641|emb|CBN76863.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 582
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 217/398 (54%), Gaps = 24/398 (6%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+LF G T W A+GRR +G+++ P RL I+ VA+G +CH V +DV+G YT
Sbjct: 119 VLFIGGTDWTALGRR--PTEGDILCPKRLLSFPK-KIKSVASGPTACHSVCIDVQGGVYT 175
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WGRNE G LGHGD R PT+V+ LS ++K+A G++HT ++ E+G G K GQ
Sbjct: 176 WGRNEFGGLGHGDTAPRAHPTLVAALSGTRMKQASCGKTHTGILAENGTLYMMGGGKLGQ 235
Query: 142 LGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG G ++ + EP V V ACGA+FT + + +L G PQ GQLG GT
Sbjct: 236 LGLGRAVESCTEPKAVEVPGGTVEKVACGAEFTAIIDN--RGRLLTFGSPQDGQLGGGTT 293
Query: 201 NEYNTK-----------DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD--SK 247
E+ K + V + R +AI G + +ACG +H VAV+ +
Sbjct: 294 GEFIEKAGKISYDLVLAPAVVPTFFSKDARTKAIEEFRGVELADIACGKSHGVAVEKGPR 353
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V+TWGFGGYGRLGH Q E PR VDV R L V +AG+ S G L+
Sbjct: 354 ARVFTWGFGGYGRLGHACQDQELRPRMVDVLARMTHLKVTKV-AAGAGCSLAITENGHLF 412
Query: 308 MWGKLKN--NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
WGKL N G+ MYPK + DLS W R + N V A++S ISWG + GELGYG
Sbjct: 413 YWGKLPNAPRGEATMYPKIVEDLSNWQTRSVAGSNGALLVAAETSTISWGTSVAGELGYG 472
Query: 366 PY--GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++S PK V+ LEG+ V+ VA G GHSL++ +
Sbjct: 473 EEIGTPRTSTKPKLVNALEGLTVMQVAMGLGHSLLLAE 510
>gi|194693980|gb|ACF81074.1| unknown [Zea mays]
Length = 229
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
MWGK+KN GDDWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYGP
Sbjct: 1 MWGKMKNTGDDWMYPKPVMDLSGWNIRCMASGNMHHIVGADDSCISWGVAQNGELGYGPN 60
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEI 427
GQKSSA PKKVDILEGMHV SV CG+G SL++VDR NVG+RL QL++YDG + E+
Sbjct: 61 GQKSSANPKKVDILEGMHVTSVGCGFGLSLIVVDRANVGDRLGQLEIYDGDTGA----EV 116
Query: 428 DRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSERKKQAG 487
++ KK +A ++ + KRKK+KD SE E EE++ D E + +++ G E K + G
Sbjct: 117 EKVEVQVTKKASASTNSRANKRKKTKDVSESESEEDDDDDEDESGDDENGGVEESKGRRG 176
Query: 488 GKASGRGRGKAANKLSGDGKGTGRGRGRPTSTNKSSQSVQGKT--GKRGRPRK 538
K + RGRG+ K + + K +GRGRGRP T S+Q G + GKRGRPRK
Sbjct: 177 RKPANRGRGRGGKKATPEAKPSGRGRGRPKKTESSAQKAGGTSGRGKRGRPRK 229
>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 223/421 (52%), Gaps = 30/421 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 78 GQLLIFGATNWDLIGRKEVPKAQVAFRNLGQNLWGPHRYGSLSDVQVSSVVSGPCAAHSL 137
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ L+ + A GR+HT+ +TE G +
Sbjct: 138 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTA 197
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG G+ + + P+ ++ + ACGA+F++ + ++ + G P
Sbjct: 198 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 255
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E R AI + + VACG NH
Sbjct: 256 EYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRDVACGGNH 315
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
T+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I G S
Sbjct: 316 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 371
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
G L+ WG + + MYPK + DL GW +R + G + AD S ISWG +
Sbjct: 372 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 431
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVY 415
+GELGYG KSS ++V L+G++ V GY H LVIV D E+L +L Y
Sbjct: 432 TFGELGYGDNKAKSSTTAQEVKTLDGVYTEQVVMGYAHCLVIVRQDTPQEQEKLKKLPEY 491
Query: 416 D 416
+
Sbjct: 492 N 492
>gi|193671838|ref|XP_001951667.1| PREDICTED: protein RCC2 homolog [Acyrthosiphon pisum]
Length = 477
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 216/404 (53%), Gaps = 27/404 (6%)
Query: 15 GKEKGGELLFCGSTCWDAVGRR---KG--ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
G + G +L G T WD GR+ KG ++ NL P PL IR V + C S H
Sbjct: 59 GPDHIGVVLLTGGTNWDLNGRKSMPKGCKSVGRNLYEPHLFGPLKDNRIRLVVSSCNSSH 118
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
+ + EG+ + GRNE+GQLG D ++RD PT + L + I A GR HT+++T+ G
Sbjct: 119 TIFITEEGKALSLGRNEKGQLGVKDLLRRDIPTPIEGLPDHAIVNAATGRGHTLLLTDRG 178
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNA 187
+ G NK+ Q G S + + + +R + + CGA+F++ L ++ +
Sbjct: 179 AVYSCGDNKNSQCGVKS-KEPVVTTAMRVKYNGPPIVKVGCGAEFSILLDC--KGTLYSF 235
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP---------RAIAALAGETIVKVACGT 238
GLP+YGQLGH T+ EY + ++ A P+P + L I ACGT
Sbjct: 236 GLPEYGQLGHNTNGEYIERAGAINFATVKLPKPIITFVEKTKNKVEILPKPEIRDFACGT 295
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRNNVLPPEAVISAGSVN 296
NHTVA+D Y+WGFGGYGRLGH E KDE PR + F QR+ V ++ G
Sbjct: 296 NHTVAIDDHKKAYSWGFGGYGRLGHSEPKDELQPRLIKYFDVQRSGV----KHVACGPAF 351
Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
S G +Y++G++ + G+ MYPKP+ DL GWNLR + + ++ AD SCI WG
Sbjct: 352 SIAINEFGAVYLFGQMSSRGEANMYPKPVQDLHGWNLRSIGTCSIGLVAAADDSCIVWGS 411
Query: 357 -AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
GELG G +KSSA P ++ L+G++V V CG H+ ++
Sbjct: 412 GTSSGELGLGEL-KKSSAKPCEMKKLDGLYVEQVTCGSAHTFLL 454
>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
Length = 426
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 210/376 (55%), Gaps = 34/376 (9%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V+A C H +A+ GRNE+GQLGHGD + + P ++ LS I A GR
Sbjct: 62 IVSAACGRNHTLALT------DLGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGR 115
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLS 177
+HT+ +TE G+ AFG NK GQLG G+ + I PSP + + + +T ACGA+F++ +
Sbjct: 116 NHTLALTETGSVFAFGENKMGQLGLGNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMD 174
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------- 230
++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 175 C--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILP 230
Query: 231 -----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ VACGTNHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 231 VPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FP 286
Query: 286 PE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
A I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 287 GRGAAHIYAGYTCSFAVSEIGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 346
Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-- 400
V AD S ISWG + +GELGYG + KSS ++V L+G++ VA GY HSLVI
Sbjct: 347 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARD 406
Query: 401 DRTNVGERLDQLDVYD 416
+ E+L +L Y+
Sbjct: 407 ESETEKEKLKKLPEYN 422
>gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo salar]
Length = 569
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 221/421 (52%), Gaps = 30/421 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 151 GQLLIFGATNWDLIGRKEVPKAQVAFRNLGQNLWGPHRYSSLSDVQVSSVVSGPCAAHSL 210
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ L+ + A GR+HT+ +TE G +
Sbjct: 211 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEPLADEVVVAAACGRNHTLALTEGGTA 270
Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG G+ + + P+ ++ + ACGA+F++ + ++ + G P
Sbjct: 271 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 328
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
+YGQLGH +D ++ + ++ E R AI + + VACG NH
Sbjct: 329 EYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRDVACGGNH 388
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
T+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I G S
Sbjct: 389 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 444
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
G L+ WG + + MYPK + DL GW +R + G + AD S ISWG +
Sbjct: 445 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 504
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVY 415
+GELGYG KSS ++V L+G++ V GY H LVI D E L +L Y
Sbjct: 505 TFGELGYGDNKAKSSTTAQEVKTLDGVYTEQVVMGYAHCLVIARQDTPQEQETLKKLPEY 564
Query: 416 D 416
+
Sbjct: 565 N 565
>gi|301625970|ref|XP_002942173.1| PREDICTED: protein RCC2 homolog [Xenopus (Silurana) tropicalis]
Length = 456
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 213/390 (54%), Gaps = 34/390 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 76 VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R VAAG + H + + VEG+ ++WGRN++GQLGHGD + D P ++ L
Sbjct: 136 LTGVQVRTVAAGPCAAHSLLITVEGKLWSWGRNDKGQLGHGDVKRIDVPKLIESLKGEVF 195
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
GR+HT+ +TE+G+ AFG NK GQLG G+ + + PSP + L + +T ACGA
Sbjct: 196 VHGACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D +Y + + ++ Y+ + R IA +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +ACG NH++ +DS+ V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQVLPVPNVVVRDIACGINHSLVLDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P I AG+ S + G L+ WG + D MYPK + DL GW +R +
Sbjct: 371 D----FPGRGASQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKTVQDLCGWKVRNL 426
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYG 365
G + AD S ISWG + +GEL G
Sbjct: 427 ACGKSSIILAADESTISWGPSPTFGELFLG 456
>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 220/411 (53%), Gaps = 21/411 (5%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L V + V +G + H +
Sbjct: 9 GQLLVFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 68
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRN++GQLGHGD + + P ++ L+ + + A GR+HT+ +T+DG+
Sbjct: 69 LITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDDGSV 128
Query: 132 LAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
+FG NK GQLG GS + P+ + + ACGA+F++ + ++ + G P
Sbjct: 129 YSFGENKLGQLGQGSQTYAVLSPALISYDGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 186
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+YGQLGH +D ++ + ++ E PR AI + +V N + +DS+ V
Sbjct: 187 EYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI-FIEKSKDGQVMPVPNVVLVLDSQKRV 245
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYM 308
++WGFGGYGRLGH EQKDE VPR + +F P I G S + G L+
Sbjct: 246 FSWGFGGYGRLGHAEQKDEMVPRLIKLFD----FPGRGASQIYTGYQCSFAVSENGGLFF 301
Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY-GELGYGPY 367
WG + + MYPK + DL GW +R + G + AD S I+WG + GELGYG
Sbjct: 302 WGVTNTSRESTMYPKVVPDLCGWKIRSLACGKSSIIIAADESTITWGPSPTCGELGYGDN 361
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVYD 416
KSS ++V L+G++V V GY HSLVI D ERL +L Y+
Sbjct: 362 KPKSSTTAQEVKTLDGVYVEKVMMGYSHSLVIARQDTEQEKERLKKLPEYN 412
>gi|13436272|gb|AAH04933.1| RCC2 protein, partial [Homo sapiens]
Length = 351
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 202/356 (56%), Gaps = 28/356 (7%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+ AFG NK
Sbjct: 1 WSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKM 60
Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G P+YGQLGH
Sbjct: 61 GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGCPEYGQLGH 117
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
+D ++ + + ++ Y+ + PR +A +T + VACG NHT+ +D
Sbjct: 118 NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 175
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
S+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S +
Sbjct: 176 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYTCSFAVSEV 231
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
G L+ WG + + MYPK + DL GW +R + G V AD S ISWG + +GEL
Sbjct: 232 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 291
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVYD 416
GYG + KSS ++V L+G+ VA GY HSLVI + E++ +L Y+
Sbjct: 292 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKLPEYN 347
>gi|157137553|ref|XP_001664005.1| Bj1 protein, putative [Aedes aegypti]
gi|108869688|gb|EAT33913.1| AAEL013820-PA [Aedes aegypti]
Length = 484
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 222/423 (52%), Gaps = 40/423 (9%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
AEL + M + ++ G+LL G W+ G K N+ RP + RF
Sbjct: 60 AELSDKLM--KRFDEQPPGKLLIAGLVTWELTGGPKAKPVSNV------RPNLYSFHRFT 111
Query: 62 A-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+ GC S H V + ++ + +GRN+ GQLG D ++PT V+ L K+ +
Sbjct: 112 SEMYRSAVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKVVQ 171
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFT 173
A GR+HT+ +T++G A G N+HGQ G G + + + ++ + ACGA+F+
Sbjct: 172 AACGRNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKYTGPPIVKVACGAEFS 231
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ L + + GLP++GQLGH TD +Y ++ +LAY + PR I +T
Sbjct: 232 MILDI--NGRLYSFGLPEHGQLGHNTDGKYFI--TANRLAYHYETVPRQIVTYVEKTNEG 287
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--Q 279
I+ ACG NHTVA+DSK ++WGFGGYGRLGH +DEWVPR F Q
Sbjct: 288 RTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQ 347
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+ VL + G+ S G ++++G+ + N D MYPKP+ DL+GW + + +G
Sbjct: 348 KRKVL----RVFCGTAFSVAITDVGCVHLFGRNRVNADANMYPKPVQDLTGWKVTSIGAG 403
Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ AD S I+WG + YGELG G KSS+ PK V +EG+ + A G HSL+
Sbjct: 404 YSSILISADDSLIAWGASPTYGELGLGD-EVKSSSKPKLVPGMEGVKISHAAVGQSHSLL 462
Query: 399 IVD 401
+V+
Sbjct: 463 LVN 465
>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
Length = 333
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 192/337 (56%), Gaps = 26/337 (7%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I A
Sbjct: 6 VRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 65
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVW 175
GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA+F++
Sbjct: 66 GRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMI 124
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET----- 230
+ ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 125 MDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQI 180
Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD---- 236
Query: 284 LPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
P I AG S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 237 FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS 296
Query: 342 HHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKK 377
V AD S ISWG + +GELGYG + KSS ++
Sbjct: 297 SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQR 333
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 54/321 (16%)
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-CGADFT 173
+G+ +H++++T +G ++G N+ GQLG G + P + L EV +A CG + T
Sbjct: 11 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 70
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ L+ E S+ G + GQLG G N+ + S ++ Y QP I K
Sbjct: 71 LALT--ETGSVFAFGENKMGQLGLG--NQTDAVPSPAQIMYNGQP------------ITK 114
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGH--------REQKDEW----VPRRVDVF--- 278
+ACG ++ +D KG +Y++G YG+LGH R Q+ E+ VPRRV +F
Sbjct: 115 MACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 174
Query: 279 -QRNNVLP-PEAVI---SAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPK--PL 325
+ +LP P V+ + G+ ++ +++ WG +L + D M P+ L
Sbjct: 175 TKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 234
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D G + +G F V WG ++S+ PK V L G
Sbjct: 235 FDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTS--------RESTMYPKAVQDLCGW 286
Query: 385 HVISVACGYGHSLVIVDRTNV 405
+ S+ACG +V D + +
Sbjct: 287 RIRSLACGKSSIIVAADESTI 307
>gi|157137551|ref|XP_001664004.1| Bj1 protein, putative [Aedes aegypti]
gi|108869687|gb|EAT33912.1| AAEL013819-PA [Aedes aegypti]
Length = 484
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 222/423 (52%), Gaps = 40/423 (9%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
AEL + M + ++ G+LL G W+ G K N+ RP + RF
Sbjct: 60 AELSDKLM--KRFDEQPPGKLLIAGLVTWELTGGPKAKPVSNV------RPNLYSFHRFT 111
Query: 62 A-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+ GC S H V + ++ + +GRN+ GQLG D ++PT V+ L K+ +
Sbjct: 112 SEMYRSAVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKVVQ 171
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFT 173
A GR+HT+ +T++G A G N+HGQ G G + + + ++ + ACGA+F+
Sbjct: 172 AACGRNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKYTGPPIVKVACGAEFS 231
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ L + + GLP++GQLGH TD +Y ++ +LAY + PR I +T
Sbjct: 232 MILDI--NGRLYSFGLPEHGQLGHNTDGKYFI--TANRLAYHYETVPRQIVTYVEKTNEG 287
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--Q 279
I+ ACG NHTVA+DSK ++WGFGGYGRLGH +DEWVPR F Q
Sbjct: 288 RTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQ 347
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+ VL + G+ S G ++++G+ + N D MYPKP+ DL+GW + + +G
Sbjct: 348 KRKVL----RVFCGTAFSVAITDVGCVHLFGRNRVNADANMYPKPVQDLTGWKVTSIGAG 403
Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ AD S I+WG + YGELG G KS++ PK V +EG+ + A G HSL+
Sbjct: 404 YSSILISADDSLIAWGASPTYGELGLGDV-VKSTSKPKLVPGMEGVKISHAAVGQSHSLL 462
Query: 399 IVD 401
+V+
Sbjct: 463 LVN 465
>gi|328767985|gb|EGF78033.1| hypothetical protein BATDEDRAFT_91148 [Batrachochytrium
dendrobatidis JAM81]
Length = 497
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 221/422 (52%), Gaps = 30/422 (7%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA----LDG---NLVSPTRLRPLV 54
A + E + G L+FCG+T WD VGR+ +D +P
Sbjct: 10 AGMSPETSADISKNSHSTGGLVFCGATIWDWVGRKSSTNSKTMDFGSHEFPAPHIYGAAA 69
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+++ V + C S H V +D +G YT+GRN+ GQLG G R P ++ + K
Sbjct: 70 YINVVDVFSHCTSAHAVIIDDQGAAYTFGRNQNGQLGDGTTTSRSDPFRIN-IKGETFVK 128
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGAD 171
A G++HT++VT G A G NK Q G + I+ ++ + ++ ACG D
Sbjct: 129 AAVGKAHTLLVTASGRVYAAGENKVQQCGVKAGVDIKTFVQVTAIKG--QHAVDVACGLD 186
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
F+ L+ E ++ G PQYGQLG G D+ Y + S ++ Y+ Q P+ I L + I
Sbjct: 187 FS--LAITEDGTLFAWGSPQYGQLGDGKDHSYISGTS--RMIYDPQ-MPKPITKLEDKKI 241
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQ-RNNVLPPEA 288
V +ACGTNH++A+D +G VY+WG GGYGRLG + KD +VP V F+ RNN++
Sbjct: 242 VAIACGTNHSLALDDQGAVYSWGCGGYGRLGLPDSPPKDIFVPTEVPGFKDRNNMV---K 298
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHH 343
I+ G+ + G LY+WGK K +GD W+YPK LSGW + + +G
Sbjct: 299 KIACGTTSCMAIDGRNALYLWGKWKQSGDGGQGTPWLYPKHYPGLSGWEVWEISAGGSTL 358
Query: 344 FVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
F A S +SWG +A +GELG+GP +S V +EG+ V+CG G +L++ D+
Sbjct: 359 FALAGESTVSWGQNAYHGELGHGPNAPRSCVNADIVKGMEGISCKKVSCGLGFTLMVADK 418
Query: 403 TN 404
++
Sbjct: 419 SS 420
>gi|426328132|ref|XP_004024855.1| PREDICTED: protein RCC2, partial [Gorilla gorilla gorilla]
Length = 661
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 196/353 (55%), Gaps = 28/353 (7%)
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
GRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+ AFG NK GQL
Sbjct: 314 GRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQL 373
Query: 143 GSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
G G+ + + PSP + + + +T ACGA+F++ + ++ + G P+YGQLGH +D
Sbjct: 374 GLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGCPEYGQLGHNSD 430
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVDSKG 248
++ + + ++ Y+ + PR +A +T + VACG NHT+ +DS+
Sbjct: 431 GKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 488
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
V++WGFGGYGRLGH EQKDE VPR V +F P I AG S + G L
Sbjct: 489 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYTCSFAVSEVGGL 544
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGYG 365
+ WG + + MYPK + DL GW +R + G V AD S ISWG + +GEL
Sbjct: 545 FFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELVSR 604
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQLDVYD 416
+ KSS ++V L+G+ V GY HSLV D++ E++ +L Y+
Sbjct: 605 DHKPKSSTAAQEVKTLDGIFSEKVTMGYSHSLVTPRDKSETEKEKIKKLPEYN 657
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-CGADFTV 174
G GRS ++ GN G N+ GQLG G + P + L EV +A CG + T+
Sbjct: 297 GPGRSLLWILAVVGN--LEGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 354
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ E S+ G + GQLG G N+ + S ++ Y QP I K+
Sbjct: 355 ALT--ETGSVFAFGENKMGQLGLG--NQTDAVPSPAQIMYNGQP------------ITKM 398
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGH--------REQKDEW----VPRRVDVF---- 278
ACG ++ +D KG +Y++G YG+LGH R Q+ E+ VPRRV +F
Sbjct: 399 ACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKT 458
Query: 279 QRNNVLP-PEAVI---SAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPK--PLM 326
+ +LP P V+ + G+ ++ +++ WG +L + D M P+ L
Sbjct: 459 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 518
Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
D G + +G F V WG ++S+ PK V L G
Sbjct: 519 DFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTS--------RESTMYPKAVQDLCGWR 570
Query: 386 VISVACGYGHSLVIVDRTNV 405
+ S+ACG +V D + +
Sbjct: 571 IRSLACGKSSIIVAADESTI 590
>gi|270007881|gb|EFA04329.1| hypothetical protein TcasGA2_TC014623 [Tribolium castaneum]
Length = 430
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 179/322 (55%), Gaps = 19/322 (5%)
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATA 167
K ++ +G +H+V++TE+G +L FG NK GQLG + P+ V L + V A
Sbjct: 113 KVRLAVSGCVATHSVLITEEGKALTFGRNKFGQLGLEHTETKEIPTVVPALENMNVIGAA 172
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----- 222
CG + T++L+ G + + GLP+YGQLGH TD +Y ++ + +E P+
Sbjct: 173 CGRNHTLFLTDTGG--LHSFGLPEYGQLGHNTDGKYFKTNTKLCFNFETSPKRIVLYIEK 230
Query: 223 -----IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+A + IV +CG NHTVA+DSK ++WGFGG+GRLGH E +DE VPR +
Sbjct: 231 SKDGHVAPVDVTEIVDFSCGQNHTVAIDSKKRAFSWGFGGFGRLGHAEPRDELVPRLIKY 290
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
F + I GS S G L+M+G+ K G+ MYPKP+ DLSGW + +
Sbjct: 291 FDTQS--KGLRSIHCGSTYSLAVTEFGALFMFGQTKRTGEANMYPKPIQDLSGWTINHVA 348
Query: 338 SGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+GN V AD S ISWG +GELG G KSS PK+V L G+ V+ ++ G+GH+
Sbjct: 349 AGNTSIIVSADESVISWGSTPTFGELGLGEI-TKSSTTPKEVTKLTGVKVLGLSMGFGHT 407
Query: 397 LVIVDRTNVGE--RLDQLDVYD 416
L+I E +L+ DV++
Sbjct: 408 LLIAQNETPEEKTKLETFDVFE 429
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 58/272 (21%)
Query: 19 GGELLFCGSTCWDAVGRR-----KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
G+LL G WD + K L NL SP R L +R +GCV+ H V +
Sbjct: 72 AGQLLIFGLINWDYTSNKVPKEVKIKLHPNLYSPHRF--LTDQKVRLAVSGCVATHSVLI 129
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
EG+ T+GRN+ GQLG ++ PT+V L + A GR+HT+ +T+ G +
Sbjct: 130 TEEGKALTFGRNKFGQLGLEHTETKEIPTVVPALENMNVIGAACGRNHTLFLTDTGGLHS 189
Query: 134 FGWNKHGQLGSGS----------IRNEIEPSPVRCL---------------VSEVTATAC 168
FG ++GQLG + + E SP R + V+E+ +C
Sbjct: 190 FGLPEYGQLGHNTDGKYFKTNTKLCFNFETSPKRIVLYIEKSKDGHVAPVDVTEIVDFSC 249
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR----PRAIA 224
G + TV + S + A + G +G+LGH A+PR PR I
Sbjct: 250 GQNHTVAIDSKKRA--FSWGFGGFGRLGH------------------AEPRDELVPRLIK 289
Query: 225 ALAGET--IVKVACGTNHTVAVDSKGYVYTWG 254
++ + + CG+ +++AV G ++ +G
Sbjct: 290 YFDTQSKGLRSIHCGSTYSLAVTEFGALFMFG 321
>gi|428163470|gb|EKX32539.1| hypothetical protein GUITHDRAFT_121290 [Guillardia theta CCMP2712]
Length = 453
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 209/434 (48%), Gaps = 45/434 (10%)
Query: 22 LLFCGSTCWDAVGR--RKGALDG--NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
LL G T W+ GR +KG NL PT P + + + G S HC+A+ +G
Sbjct: 3 LLLAGCTSWEQSGRNPKKGETPSGENLNVPTVFAPALKLKFDSIFTGPSSTHCIALTSDG 62
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
CY++GRNE GQLG GDK R PT++ L + G++HT+ + + G G N
Sbjct: 63 SCYSFGRNETGQLGQGDKSNRSSPTLIKALENETVVNIAVGKTHTIFLGDAGQVWCCGTN 122
Query: 138 KHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K G+ G G E +P PV S++ GA+F++ ++ E + + G P+YG LG
Sbjct: 123 KFGECGIGRTSEVEDKPKPVN-FGSKIVHAGAGAEFSIAVN--EEGKVFSFGHPEYGALG 179
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAI---------------AALAGETIVKVACGTNHT 241
HGTD + ++ + + P I A + I +V CG HT
Sbjct: 180 HGTDGRFII--ATGRQGFREVSTPTQITQWHLSDSKGKEFLGAIVEPPVIQRVYCGNKHT 237
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+AV G ++ WG+ GYGRLG + D P +V+ FQ + + ++ AG +S
Sbjct: 238 LAVGDDGSLWAWGYNGYGRLGLNDPHDRKRPCKVEFFQGPHAIKNPDLVVAGGASSGAVD 297
Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS----------- 350
G GQLY WG++K G+ + P +L GW +R + GN + D +
Sbjct: 298 GIGQLYTWGQIKKVGESQVRPHAEHNLGGWRVRSLSFGNESFAISCDGNKEPRRPWVEGC 357
Query: 351 -----CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
I+WG ++YGELGYG +KSSA P V L G V VA G GH+ ++D+ +V
Sbjct: 358 ESIPHVITWGTSKYGELGYGG-SKKSSANPDIVSSLTGFTVKKVAAGVGHTCFLLDK-DV 415
Query: 406 GERLDQLDVYDGKA 419
E VYD A
Sbjct: 416 DE--SSFPVYDPPA 427
>gi|449670564|ref|XP_004207295.1| PREDICTED: protein RCC2-like [Hydra magnipapillata]
Length = 481
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 190/376 (50%), Gaps = 30/376 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R + L G+ I V++G VS AV EGR Y+ G N +GQLGH D R P ++
Sbjct: 61 SPHRYQTLDGIKIHTVSSGSVSYFFYAVSDEGRVYSCGLNAKGQLGHDDLKNRRNPCLIE 120
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT 164
L ++I+ GR H + +T++G + G NK+GQ G G+ + + P+P+ +
Sbjct: 121 SLKDHQIETVATGRQHGLFLTKEGIVFSCGDNKNGQCGIGNKKEVVTVPTPINYTGPPIV 180
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE--------YNTKDSSVKLA--Y 214
ACG +F++ L+ E + + GLP+YGQLG G++N+ ++ + S V L
Sbjct: 181 QIACGGEFSLILN--EDGVVFSFGLPEYGQLGLGSENKEISARKEVFHCEYSPVPLTSFV 238
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E P L I K+ACG NH A+D K ++TWGFGGYGRLGH + K+E VPR
Sbjct: 239 EIDPDEGGTIFLGKPKITKIACGVNHCCAIDDKQRLFTWGFGGYGRLGHNDTKNELVPRL 298
Query: 275 VDVFQR---------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
+ + R NV + ++ C ++G+ N + MYPK +
Sbjct: 299 MKCWYRITGRADGGITNVFCGQQFTIVQTIVPKCAL------LFGQQATNKEANMYPKFI 352
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
DL+GW+++ + + V AD I S YG L GP KSSA PK + L+ +
Sbjct: 353 DDLNGWDVKHISCNQSGYIVCADDKVIASQPSPCYGTLAMGP-TVKSSAAPKIITTLKDV 411
Query: 385 HVISVACGYGHSLVIV 400
GY HSL +V
Sbjct: 412 VCFQTGVGYMHSLYLV 427
>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
Length = 402
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 173/300 (57%), Gaps = 27/300 (9%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 83 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P +V LS I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 261
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 262 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 317
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 95/251 (37%), Gaps = 54/251 (21%)
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V V + +C A L + EG + + G + GQLGHG
Sbjct: 148 VRTVVSGSCAAH--SLLITTEG-KLWSWGRNEKGQLGHGDTKRVEA-------------- 190
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + L+ E IV ACG NHT+A+ G V+ +G G+LG Q D VP +
Sbjct: 191 PRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMY 249
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+ A + S+ C G LY +G C + G
Sbjct: 250 NGQPITKMACGAEFSMIMDCK---GNLYSFG------------------------CPEYG 282
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV---DILEGMHVI--SVACGYG 394
+ H +D I+ AQ E ++ + +K IL +V+ VACG
Sbjct: 283 QLGH--NSDGKFIA--RAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGAN 338
Query: 395 HSLVIVDRTNV 405
H+LV+ + V
Sbjct: 339 HTLVLDSQKRV 349
>gi|391337262|ref|XP_003742989.1| PREDICTED: protein RCC2 homolog [Metaseiulus occidentalis]
Length = 486
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 205/415 (49%), Gaps = 32/415 (7%)
Query: 11 EEETGKEKG--GELLFCGSTCWDAVGR---RKGALDGN-LVSPTRLRPLVGVDIRFVAAG 64
E+E K G G L+ G WD+ G+ K ++ N L SP R P + V G
Sbjct: 60 EDELQKHLGEPGRLILAGCVSWDSTGKSSKNKISMPFNCLWSPMRFGPCADKKVCKVITG 119
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
SCH V + EG+ + +GRN GQLG D R+ P IV L + + A G++HT+
Sbjct: 120 RQSCHTVLITNEGKAWVFGRNTNGQLGTCDTKARNIPVIVDTLKESTVINAAMGKNHTLF 179
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+T +G G NK GQ+G G + N + P+ + +V CG +F++ + S
Sbjct: 180 LTINGTVFGCGENKCGQVGVGHTQPNILVPTRINMKGRKVVKLDCGNEFSMMVDS--NGQ 237
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAI--------AALAGETIVK 233
+ G P+YGQLG+ TD +Y S + Y P+ P + + ++V
Sbjct: 238 LFGCGSPEYGQLGNNTDGQYFITSSKLAFNYVTSPKRVPLFVEKDKDNRATPIHDVSVVD 297
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
++CG NHT +DS V+TWGFGGYGRLGH Q DE VPR + F+ P+ +
Sbjct: 298 LSCGINHTAVIDSNRRVFTWGFGGYGRLGHASQADEKVPRLLRGFEG-----PQKGAARI 352
Query: 294 SVNSSCTAGGGQ---LYMWGKLKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
SCT LYM GK+ + MYP+ + DLSGW + M + AD
Sbjct: 353 WCGGSCTFVLNHLNILYMAGKIHTGASREANMYPQVVQDLSGWTVTDMSVSCHAVAIAAD 412
Query: 349 SSCISWGHAQ-YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH-SLVIVD 401
++ + G + YGEL G G+KSSA V LEG+ V VA G GH +L+ +D
Sbjct: 413 NNLVVQGGGKTYGELALGE-GRKSSANYDTVKTLEGIKVKQVATGLGHLALLAID 466
>gi|327290825|ref|XP_003230122.1| PREDICTED: protein RCC2-like, partial [Anolis carolinensis]
Length = 500
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 211/462 (45%), Gaps = 68/462 (14%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
G + G+LL G+T WD +GR++ L NL P R L GV +R V +G
Sbjct: 46 GSKFKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPC 105
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSEL------------------ 107
+ H + + EG+ ++W +++ +R P +V L
Sbjct: 106 AAHSLLITTEGKLWSWASSKKDVPSSVASSRRSSPIQLVQRLRSSSHGQSSDADAQVSPN 165
Query: 108 ----SKYKIKKAGAGRSHT-------VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
+ K+ + R E G + + + S +I P P
Sbjct: 166 RSVRTVIKVPQPAPSRPQARQELFPPAQTPERGRQM----TRLARAVQASTSKDIRPQPA 221
Query: 157 RCLV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
L +T ACGA+F++ + ++ + G P+YGQLGH +D ++ + ++
Sbjct: 222 AALEIMYNGQPITKVACGAEFSMVMDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIE 279
Query: 212 LAYEAQPRPRAI----------AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
E PR AI + + VACG NHT+ +DS+ V++WGFGGYGRL
Sbjct: 280 FDCELVPRRVAIFIEKTKDGQILPVPNVVVRAVACGANHTLVLDSQKRVFSWGFGGYGRL 339
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
GH EQ+DE VPR V +F P A I AG S + G L+ WG + D
Sbjct: 340 GHAEQRDEMVPRLVKLFD----FPGRGAAQIYAGYTCSFAISETGGLFFWGATNTSRDST 395
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKV 378
MYPK + DL GW +R + G V AD S ISWG + +GELGYG + KSS ++V
Sbjct: 396 MYPKTVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTSAQEV 455
Query: 379 DILEGMHVISVACGYGHSLVI--VDRTNVGERLDQLDVYDGK 418
L+G++V VA GY HSL I V+ E+ +L Y+ +
Sbjct: 456 KTLDGIYVEQVAMGYSHSLAIARVESEAESEKAKKLPEYNPR 497
>gi|443714898|gb|ELU07096.1| hypothetical protein CAPTEDRAFT_168471 [Capitella teleta]
Length = 293
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 168/294 (57%), Gaps = 24/294 (8%)
Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G +++ PSP + S + +CG +F++ + + G ++ + G P+YGQLGH
Sbjct: 2 GQLGLG-LQSPYVPSPSKIKFSGAPIKRISCGGEFSM-IVDMRG-NLFSFGHPEYGQLGH 58
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
D +Y +S KL Y + PR +A + IV VACG NH+VA+D
Sbjct: 59 NNDGKYFV--TSNKLTYNCEVAPRKVAVFVEKARDGHVSAINDVEIVDVACGANHSVAID 116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
K +YTWGFGGYGRLGH EQKDE VPR V VF+ + I+AGS G
Sbjct: 117 QKKRLYTWGFGGYGRLGHAEQKDELVPRVVKVFE--GIRRGAVEIAAGSSFCLAVNECGG 174
Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGY 364
L+ WG+ K G+ MYPKP+MDL+GW +R + N V AD S ISWG + YGELGY
Sbjct: 175 LFFWGQNKPTGEATMYPKPVMDLNGWKIRSIGCCNRSIVVAADDSVISWGSSPTYGELGY 234
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQLDVYD 416
G KSS P+++ +L+G+ + ++CGY H++++ D RL++L ++
Sbjct: 235 GDSKSKSSTTPQEMKLLDGVFIQKISCGYAHTILLARCDSDEEKTRLEKLPSFN 288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK--IKK 114
D+ V C + H VA+D + R YTWG G+LGH ++ P +V + +
Sbjct: 99 DVEIVDVACGANHSVAIDQKKRLYTWGFGGYGRLGHAEQKDELVPRVVKVFEGIRRGAVE 158
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
AG S + V E G F W ++ G ++ P PV L ++ + C
Sbjct: 159 IAAGSSFCLAVNECGG--LFFWGQNKPTGEATMY----PKPVMDLNGWKIRSIGCCNRSI 212
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
V + + + I P YG+LG+G DS K + P+ + L G I K
Sbjct: 213 V--VAADDSVISWGSSPTYGELGYG--------DSKSK----SSTTPQEMKLLDGVFIQK 258
Query: 234 VACGTNHTVAV 244
++CG HT+ +
Sbjct: 259 ISCGYAHTILL 269
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 54/252 (21%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---------- 95
SP++++ G I+ ++ G + VD+ G +++G E GQLGH +
Sbjct: 15 SPSKIK-FSGAPIKRISCG--GEFSMIVDMRGNLFSFGHPEYGQLGHNNDGKYFVTSNKL 71
Query: 96 --------------IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
+++ R VS ++ +I G +H+V + + +G+ +G+
Sbjct: 72 TYNCEVAPRKVAVFVEKARDGHVSAINDVEIVDVACGANHSVAIDQKKRLYTWGFGGYGR 131
Query: 142 LGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
LG ++E+ P V+ + A G+ F + ++ GL +GQ
Sbjct: 132 LGHAEQKDELVPRVVKVFEGIRRGAVEIAAGSSFCLAVNEC-------GGLFFWGQ---- 180
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG-G 257
K EA P+ + L G I + C N ++ V + V +WG
Sbjct: 181 -----------NKPTGEATMYPKPVMDLNGWKIRSIGC-CNRSIVVAADDSVISWGSSPT 228
Query: 258 YGRLGHREQKDE 269
YG LG+ + K +
Sbjct: 229 YGELGYGDSKSK 240
>gi|60099075|emb|CAH65368.1| hypothetical protein RCJMB04_23b17 [Gallus gallus]
Length = 385
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 162/276 (58%), Gaps = 27/276 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 111 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL 170
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ L I A GR+HT+ +TE G+
Sbjct: 171 LITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGSV 230
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 231 YAFGENKMGQLGLGNQTDAV-PSPTQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 287
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 288 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 345
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR
Sbjct: 346 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 381
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 37/218 (16%)
Query: 220 PRAIAALAGETIVKVACG--TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P L+G + V G H++ + ++G +++WG G+LGH + K P+ ++V
Sbjct: 146 PHRYGCLSGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEV 205
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
++ + + G ++ G +Y +G+ L N D P +M +G
Sbjct: 206 LGSEAIV----LAACGRNHTLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQIM-YNG 260
Query: 331 WNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQ----------KSSAMPKKVD 379
+ M G + + S+G +YG+LG+ G+ +P++V
Sbjct: 261 QPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 320
Query: 380 IL------------EGMHVISVACGYGHSLVIVDRTNV 405
I + V VACG H+LV+ + V
Sbjct: 321 IFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRV 358
>gi|149024443|gb|EDL80940.1| regulator of chromosome condensation 2 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 296
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 28/304 (9%)
Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G P+YGQLGH
Sbjct: 2 GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
+D ++ + + ++ Y+ + PR +A +T + VACG NHT+ +D
Sbjct: 59 NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
S+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S +
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
G L+ WG + + MYPK + DL GW +R + G V AD S ISWG + +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQLDVYDGKAS 420
GYG + KSS ++V L+G+ VA GY HSLVI D + ERL +L Y + S
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKERLQRLPEYTPRTS 292
Query: 421 SQDN 424
+ N
Sbjct: 293 PELN 296
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
++ P+ V +R VA C + H + +D + R ++WG G+LGH ++ P +V +L
Sbjct: 93 QILPVPNVVVRDVA--CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLF 149
Query: 109 KYKIKKAG---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
+ + A AG + + V+E G +G + S + + P V+ L +
Sbjct: 150 DFPGRGATQIYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIR 203
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG + + + ++I P +G+LG+G ++ K S+ + +
Sbjct: 204 SLACGKSSII--VAADESTISWGPSPTFGELGYG---DHKPKSSTAA---------QEVK 249
Query: 225 ALAGETIVKVACGTNHTVAV 244
L G +VA G +H++ +
Sbjct: 250 TLDGIFSEQVAMGYSHSLVI 269
>gi|149024444|gb|EDL80941.1| regulator of chromosome condensation 2 (predicted), isoform CRA_b
[Rattus norvegicus]
gi|149024445|gb|EDL80942.1| regulator of chromosome condensation 2 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 292
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 162/295 (54%), Gaps = 28/295 (9%)
Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G P+YGQLGH
Sbjct: 2 GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
+D ++ + + ++ Y+ + PR +A +T + VACG NHT+ +D
Sbjct: 59 NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
S+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S +
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
G L+ WG + + MYPK + DL GW +R + G V AD S ISWG + +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQLDVY 415
GYG + KSS ++V L+G+ VA GY HSLVI D + ERL +L Y
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKERLQRLPEY 287
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
++ P+ V +R VA C + H + +D + R ++WG G+LGH ++ P +V +L
Sbjct: 93 QILPVPNVVVRDVA--CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLF 149
Query: 109 KYKIKKAG---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
+ + A AG + + V+E G +G + S + + P V+ L +
Sbjct: 150 DFPGRGATQIYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIR 203
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG + + + ++I P +G+LG+G ++ K S+ + +
Sbjct: 204 SLACGKSSII--VAADESTISWGPSPTFGELGYG---DHKPKSSTAA---------QEVK 249
Query: 225 ALAGETIVKVACGTNHTVAV 244
L G +VA G +H++ +
Sbjct: 250 TLDGIFSEQVAMGYSHSLVI 269
>gi|344242881|gb|EGV98984.1| Protein RCC2 [Cricetulus griseus]
Length = 292
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 28/295 (9%)
Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G P+YGQLGH
Sbjct: 2 GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
+D ++ + + ++ Y+ + PR +A +T + VACG NHT+ +D
Sbjct: 59 NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLD 116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
S+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S +
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
G L+ WG + + MYPK + DL GW +R + G V AD S ISWG + +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQLDVY 415
GYG + KSS ++V L+G+ VA GY HSLVI D + E+L +L Y
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLKKLPEY 287
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ F+ C + H + +D + R ++WG G+LGH ++ P +V +L + + A
Sbjct: 99 NVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGAT 157
Query: 117 ---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADF 172
AG + + V+E G +G + S + + P V+ L + + ACG
Sbjct: 158 QIYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIRSLACGKSS 211
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ + + ++I P +G+LG+G ++ K S+ + + L G
Sbjct: 212 II--VAADESTISWGPSPTFGELGYG---DHKPKSSTAA---------QEVKTLDGIFSE 257
Query: 233 KVACGTNHTVAV 244
+VA G +H++ +
Sbjct: 258 QVAMGYSHSLVI 269
>gi|358054870|dbj|GAA99083.1| hypothetical protein E5Q_05772 [Mixia osmundae IAM 14324]
Length = 561
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 198/422 (46%), Gaps = 37/422 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G L+ G T W GR+ ++ +P+ +R + V R + VA+D+ G
Sbjct: 26 GRLVVTGCTDWATAGRKAVQNSADVTTPSIVRSVAHVAFRRIFTSHSGATHVAIDINGTA 85
Query: 80 YTWGRNERGQLGHGDKIQRDRP------------TIVSELSKYKIKKAGAGRSHTVVVTE 127
+ WGRNE G LG P T+ S LS+ I A GR H ++VTE
Sbjct: 86 WLWGRNEHGALGTNAPDPVSGPVSLLNSSFYPANTLPSGLSQSPIVHAAIGRHHLLLVTE 145
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS------EVTATACGADFTVWLSSVEG 181
G A G N GQ G +++ + +V+ + A G ++++ L++
Sbjct: 146 AGEVYAAGANAMGQCGQDDLKDL---HAFKRVVAGGIGKEKAIQVAAGINYSLILTTT-- 200
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G + G LG G EY T LA++ QP P + L G+ I++++ G H
Sbjct: 201 GRVYAFGSHEKGVLGSGKTGEYITGKG---LAFQEQPTPMPVRGLEGKDIIQISSGQQHN 257
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+DS GY+Y WG+ GR G Q D V + V F + NVL + I G NS
Sbjct: 258 LALDSDGYLYAWGYSALGRTGMGNQVDLLVAKPVSQFAQTNVLMRASYICCGPQNSFVID 317
Query: 302 GGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-----SSC 351
G LY++G+ K +GD WM+P+P+ ++ + R + G F AD +
Sbjct: 318 GQRMLYLFGRWKTSGDGSSGQPWMHPRPVHEIQAYKQRLISLGGATLFAVADDEGTNNVT 377
Query: 352 ISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
I WG + GELG G +KS+ +P +V+ L+G+ ++ +A G + +V + E L+
Sbjct: 378 IGWGQNCTNGELGLGVDQRKSATLPIRVETLDGLQILDLAAGQNTTYFLVRPPHALEVLE 437
Query: 411 QL 412
+L
Sbjct: 438 KL 439
>gi|388855483|emb|CCF50929.1| uncharacterized protein [Ustilago hordei]
Length = 546
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 205/457 (44%), Gaps = 61/457 (13%)
Query: 20 GELLFCGSTCWDAVGRRKGAL---------DGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
G +L G W +GR+ +L +P LR + V ++ V + SCH
Sbjct: 10 GRVLVAGGIDWPTLGRKASKAGPPLTVNPDHPDLPAPHILRSVSNVRMKRVFSSHSSCHA 69
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQR----------------------DRPTIVSELS 108
V + V+G Y GRNE+GQ G IQR D + S
Sbjct: 70 VLLSVDGDAYIIGRNEQGQCGL--PIQRIPTSSKPSGPAVWDAYLLDPSTDFSPALPSGS 127
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEV 163
K +I A GRSHT+++T G+ + G N GQ + I IE +P +
Sbjct: 128 KGQIVFAACGRSHTLLITSSGSVYSAGLNTSGQCAHPESQTVPIFTRIETAPFIKERDPI 187
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A +CG F++ L++ + G + GQLG+G E+ T SS +LA+ P +
Sbjct: 188 IAASCGLTFSMLLTA--SGKVYTMGSSEKGQLGNGRTGEHFT--SSNRLAFNTFSEPFLV 243
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
LA + I ++ACG HT+A+D GYVY WGFGGYGRLG Q+D+ P V F R NV
Sbjct: 244 KQLADKKITQIACGQQHTIAMDEDGYVYVWGFGGYGRLGLGSQQDQLTPTLVPQFARENV 303
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDS 338
+ I AG NS+ G ++ GK K +GD +M K L DL G +
Sbjct: 304 VMRAKAIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDLMGVKITNAAL 363
Query: 339 GNMHHFVGADSSC-----------ISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G + A I WG +A GELG G +S+ P + + L+G+ +
Sbjct: 364 GGVTLLCTAIEEASVVGEHGATMNICWGQNANCGELGLGEGKPRSATKPLRNETLDGIAI 423
Query: 387 ISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQD 423
I +A G + + N+GER +L + SQ+
Sbjct: 424 IDLAAGQNTTFYLA--RNLGERYGELPRWPEVVQSQE 458
>gi|224012154|ref|XP_002294730.1| rcc1-repeat-containing protein [Thalassiosira pseudonana CCMP1335]
gi|220969750|gb|EED88090.1| rcc1-repeat-containing protein [Thalassiosira pseudonana CCMP1335]
Length = 377
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 179/368 (48%), Gaps = 34/368 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGA 117
V GC +CH V + +G Y WGRNE QLG G I + K AG
Sbjct: 1 VFTGCSACHSVVITEDGEAYGWGRNETSQLGLGPPSPLIATPTKLTIPNEESLKFVSAGV 60
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-CGADFTVWL 176
G+ HT++V E+GN+ A G NK GQLG S E +V +V A CG + + +
Sbjct: 61 GKYHTILVAENGNAYAAGGNKCGQLGVNSSVEVCERFRKCSVVGQVIVQASCGENISALI 120
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALAG 228
SS + G ++GQLG+G EY + A ++ R++ A G
Sbjct: 121 SST--GQLYTTGSSEFGQLGNGETGEYIISAGKLGFANCSKFIRRSVFVQSEGDAAIEKG 178
Query: 229 ETIV--KVACGTNHTVAVDSKGY------VYTWGFGGYGRLGHREQKDEWVPRRVDV--- 277
+ I VACG NH +A++++ V+TWG G YG LGH Q DE+ PR V V
Sbjct: 179 DCICIGSVACGRNHLIAIEAQSTSGEVPRVFTWGCGDYGCLGHAVQADEYTPRLVGVMRG 238
Query: 278 --FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS--GWNL 333
F N+ P AV AGS + G +Y WGK + G+ M P + L+ G N+
Sbjct: 239 PIFASNH--PVAAV--AGSNCTLIRTKNGHVYYWGKHRQMGEATMRPTLVDALANNGHNV 294
Query: 334 RCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
GN F A+ +SWG YGELGYG QKSSA PK V+ L+ V +ACG
Sbjct: 295 IAFGVGNQTVFCSTANGVTVSWGAGAYGELGYGKGEQKSSAKPKFVNGLDSCLVTDLACG 354
Query: 393 YGHSLVIV 400
+GH+L ++
Sbjct: 355 FGHTLFLI 362
>gi|343425648|emb|CBQ69182.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 544
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 212/456 (46%), Gaps = 59/456 (12%)
Query: 20 GELLFCGSTCWDAVGRRKGAL---------DGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
G +L G W +GR+ +L +P LR + V ++ + + SCH
Sbjct: 10 GRVLVAGGIDWPTLGRKATKAGPPLTVNPDHPDLPAPHILRSVSNVRMKRIFSSHSSCHA 69
Query: 71 VAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SKY 110
V + V+G Y GRNE+GQ G D D T S +
Sbjct: 70 VLLSVDGDAYIIGRNEQGQCGLPIRQIPASSKPSGPAVWDAYLLDPATDFSPALPAGASG 129
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTA 165
+I A GRSHT+++T G+ + G N GQ G + + IE P V A
Sbjct: 130 QIVSAACGRSHTLLITAAGSVYSAGLNTSGQCGHPESQTVPLFTRIETGPFIKDRDPVVA 189
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+CG F++ L+ + + G + GQLG+G E+ T +S +LA+ P +
Sbjct: 190 ASCGLTFSMLLT--QSGKVYTMGSSEKGQLGNGRTGEHFT--TSNRLAFNTFSDPFLVKQ 245
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LA +TIV++ACG HT+A+D +G+VY WGFGGYGRLG Q+D+ VP V F R NV+
Sbjct: 246 LADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQDQLVPTLVPQFARENVVM 305
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMD----------LSG 330
I AG NS+ G ++ GK K +GD +M K L D L G
Sbjct: 306 RAKSIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNAGLGG 365
Query: 331 WNLRC--MDSGNMHHFVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
L+C ++ ++ GA + I WG +A GELG G +S+ P + + L+G+ ++
Sbjct: 366 VTLQCTAIEEASLAGDHGATMN-ICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAIL 424
Query: 388 SVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQD 423
+A + + N+GER +L + SQ+
Sbjct: 425 DIAAAQNTTFYLA--RNLGERYGELPRWPELVQSQE 458
>gi|390596949|gb|EIN06350.1| RCC1/BLIP-II [Punctularia strigosozonata HHB-11173 SS5]
Length = 588
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 206/425 (48%), Gaps = 41/425 (9%)
Query: 20 GELLFCGSTCWDAVGRRK--GALDGN-----LVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
G++L CG T W +GR+ G +GN L+ P LR L V + V A C CH +A
Sbjct: 46 GKVLICGGTDWPKLGRKDKGGKSEGNDDHPDLLEPHILRSLSNVHVVSVHASCAGCHFIA 105
Query: 73 VDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSK-----YKIKKAGAGRSHTVVV 125
+D EG + +GRN+ LG + + + P V+ K+ A GR HT++V
Sbjct: 106 IDAEGNAWLFGRNQHSALGISKLEAVSENAPRKVTAAQLGAAEGTKLVWAACGRGHTILV 165
Query: 126 TEDGNSLAFGWNKHGQLGSG------SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
DGN+ + G N +GQ G S RN +PV+ V E A G F++ L++
Sbjct: 166 GSDGNAWSAGLNVNGQCGHAPCPEISSFRNI--KAPVKDDVKERFVKAAAGISFSLLLTA 223
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ G ++GQLG+G E+ S+ K A+E P + L IV V+CG
Sbjct: 224 --SGRVYACGSGEHGQLGNGRTGEHIV--SAGKTAFEVVSEPLLVRGLDDRKIVDVSCGQ 279
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+VA+DS+G VY WG+ GY RLG Q+D VP+ V + N + + ISAG ++
Sbjct: 280 QHSVALDSQGLVYVWGYNGYCRLGLGNQQDVMVPKVVPQYAGPNEITMGSAISAGPTSTV 339
Query: 299 CTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSS 350
G +M GK KN GD + + + D+ G + SG + HF D +
Sbjct: 340 VIDKQGMYWMAGKWKNTGDGSGGQPYSTFRYMQDIMGCKITHAASGGVTHFALCPEEDGT 399
Query: 351 CISWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
++ + Q GELG G KS+ P K LEG+ V +A G +L + R+N E
Sbjct: 400 VMTIAYGQNAGNGELGLGSDQPKSATKPTKHVPLEGVDVFQIAAGQNTTLFLA-RSN--E 456
Query: 408 RLDQL 412
+L +L
Sbjct: 457 KLSEL 461
>gi|312382134|gb|EFR27690.1| hypothetical protein AND_05265 [Anopheles darlingi]
Length = 464
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 192/425 (45%), Gaps = 90/425 (21%)
Query: 7 EKMVEEETGK-EKG-GELLFCGSTCWDAVGRR--KGALDGNLVSPTRLRPLVGVDIRFVA 62
EK+ EE G +KG G+LL G W+ G+R KG T++RP + RF
Sbjct: 60 EKLPEELLGAYDKGPGKLLIAGMVSWEMTGKRDSKGV--------TKIRPNLFSFHRFTG 111
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
QLGHGD ++PT V++L+ + + +A GR+HT
Sbjct: 112 ETL----------------------SQLGHGDTTTYEKPTQVADLADFNVIQAACGRNHT 149
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVE 180
+ +T+ G G NK GQ G G+ I SP R + + CGA+F+V L ++
Sbjct: 150 LFLTDTGTVYECGDNKSGQCGVGNKTPTIT-SPTRISYNGPPIIKVGCGAEFSVIL-DIK 207
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGET 230
G ++ GLP+YGQLGH TD Y + + +E QPR + +
Sbjct: 208 G-NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFELQPRKVLVYMEKNKEGHVLPIENVN 266
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
I+ ACG NHT F R R +
Sbjct: 267 IIDFACGNNHTF------------FDTQNRKVMR-------------------------V 289
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
GS S G LY++G+ K G+ MYPKP+ DL+GWN+ + +G + AD S
Sbjct: 290 FCGSSYSLAITDIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITSIGTGYTSIVISADDS 349
Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGE 407
I+WG + YGELG G QKSS+ PK+V +EGM + V GY H+L++V+ + E
Sbjct: 350 LIAWGASPTYGELGLGDL-QKSSSTPKEVTRMEGMKIPLVTLGYSHTLMLVNTEHEKTKE 408
Query: 408 RLDQL 412
+ D L
Sbjct: 409 KYDNL 413
>gi|392585986|gb|EIW75324.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
Length = 530
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 191/418 (45%), Gaps = 37/418 (8%)
Query: 15 GKEKGGELLFCGSTCWDAVGR--RKGALDG---------NLVSPTRLRPLVGVDIRFVAA 63
G++ G +L CG T W +GR R G G +L+ P LR L V I +
Sbjct: 13 GEQTWGRVLICGGTDWPKLGRKDRGGKAAGGEDEDEAPPDLLEPHILRSLSNVKIASIHT 72
Query: 64 GCVSCHCVAVDVEGRCYTWGRN-ERGQLGHGDKI---QRDRPTIVSELSKYK---IKKAG 116
C SCHC+A+D+ G Y +GRN + LG ++ Q+ R EL K A
Sbjct: 73 SCASCHCIALDIHGTAYMFGRNAPQTPLGVPQEVVSEQKPRKLTAPELGAGKGTRFVHAA 132
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGAD 171
GR H+++V +G+ + G N GQ G + N +IE + V A G
Sbjct: 133 CGRYHSLLVDSEGDIWSAGANNVGQCGHETCSNIPGFRKIESPEAGGVKQRVIKAAAGIT 192
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
F+V L+ E + G + GQLG+G E+ + E P P + L + I
Sbjct: 193 FSVILT--ENGRVFTFGSGEKGQLGNGRTGEHIVTGNKTAFDIEVDPIP--VKGLNDKVI 248
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG H VA+D K VY WG+ GY RLG Q+D VP+ V F N I+
Sbjct: 249 TDIACGQQHAVAIDEKNVVYVWGYNGYCRLGLGNQQDVLVPKAVPQFAGPNESGTGKYIA 308
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
AG ++ +M GK KN+G+ + +P+ DL G + SG + HF
Sbjct: 309 AGPSSTIVVDQLQAFWMAGKWKNSGEGSSGSPYSSFRPIQDLMGIKVLHASSGGVTHFAL 368
Query: 347 ADSS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
A ++WG A GELG GP KS++ P + L G+ V+SVA G + ++
Sbjct: 369 ATEEEGVMTVAWGQGASNGELGLGPEEPKSTSKPTRHMPLSGIDVLSVAAGQNTTYIL 426
>gi|449016556|dbj|BAM79958.1| similar to guanine nucleotide exchanging fractor [Cyanidioschyzon
merolae strain 10D]
Length = 532
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 211/466 (45%), Gaps = 70/466 (15%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGR-RKGALD--GNLVSPTRLR----------PLVG 55
MV G + G ELLFCGS WD GR RKGA++ +++P RL P
Sbjct: 1 MVHPNAGAQ-GAELLFCGSCKWDTQGRDRKGAIEYGEEVLAPHRLTGSVTLGGLTTPADR 59
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI--VSELSKYKIK 113
+ + +G V+ H V + +GR GRN G+LG G +R P V + +
Sbjct: 60 AQMLRIVSGPVAAHAVLILTDGRALAIGRNTHGELGIGTA-RRFAPVFMPVVFIKGGRCT 118
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS---------IRNEIEPSPVRCLVSEVT 164
A GR+HT+ + +DG A G N GQLG G+ + + P + L +
Sbjct: 119 GAACGRTHTLFLMDDGVVYATGANDAGQLGVGARGISASGANVPAAVTPIRLTYLAEHMG 178
Query: 165 ATA----CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A CG F+V L+ + S+ G + G LG GT E K ++ E++P P
Sbjct: 179 VRAAQVGCGEQFSVVLA--DDGSLYTFGTHRDGVLGLGTTGEVIGKQ---RMEVESEPLP 233
Query: 221 RAIAALA-GETIV--------------------KVACGTNHTVAVDSKGYVYTWGFGGYG 259
R + + IV +V CG H VA+DS+ V++WGFGGYG
Sbjct: 234 RRVTRFVRSDGIVVALDESKSMDEQSEDIPRFTQVVCGQRHVVALDSRHRVWSWGFGGYG 293
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
RLGHR DE PR ++ F+R V + AG+ G +Y WG K G+
Sbjct: 294 RLGHRTPNDELRPRCMEFFERLRDDRRRCVKLYAGASCCYALTEMGTVYFWGITKMTGEA 353
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA-QYGELGYGP--YGQ----- 369
P+ L DL GW +R + G + + + I+WG + YGE+G+G G+
Sbjct: 354 TTSPQMLYDLHGWKIRDIAVGISSTMIACEECTTIAWGPSPAYGEMGFGETVVGRSFAGR 413
Query: 370 ----KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQ 411
KSS P+ VD L+G+ V +A G + +++ V DQ
Sbjct: 414 TGVLKSSTQPRIVDPLKGVQVSQLAMGAFFTFLLLRPEEVQASDDQ 459
>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
Length = 548
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 208/455 (45%), Gaps = 57/455 (12%)
Query: 20 GELLFCGSTCWDAVGRRKG----ALDGN-----LVSPTRLRPLVGVDIRFVAAGCVSCHC 70
G +L G W +GR+ L N L +P LR + V ++ V + SCH
Sbjct: 10 GRVLVAGGIDWPTLGRKATKSGPPLTVNPDHPDLPAPHILRSVSNVRMKRVFSSHSSCHA 69
Query: 71 VAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SKY 110
V + V+G Y GRNE+GQ G D D T S +
Sbjct: 70 VLLSVDGNAYIIGRNEQGQCGLPIRPIPASSKPSGPAVWDAYLLDHATDFSPALPTGANG 129
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTA 165
+I A GRSHT+++T G+ + G N GQ G + I IE +P + A
Sbjct: 130 QIVYAACGRSHTLLLTASGSVYSAGLNTSGQCGHPESQTVPIFTRIETAPFIKERDAIVA 189
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+CG F++ L+ + + G + GQLG+G E+ T SS +LA+ P +
Sbjct: 190 ASCGLTFSMLLT--QSGKVYTMGSSEKGQLGNGRTGEHFT--SSNRLAFNTFSEPFLVKQ 245
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LA + IV +ACG HT+A+D +G+VY WGFGGYGRLG Q+D+ VP V F R NV+
Sbjct: 246 LADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQDQLVPTLVPQFARENVVM 305
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGN 340
I AG NS+ G ++ GK K +GD +M K L D+ G + + G
Sbjct: 306 RAKAIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNVGLGG 365
Query: 341 MHHFVGA-----------DSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ A + I WG +A GELG G +S+ P + + L+G+ +I
Sbjct: 366 VTLLCTAIEEPSLSGDHGATMNICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAIID 425
Query: 389 VACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQD 423
+A + + N+GER +L + SQ+
Sbjct: 426 IAAAQNTTFYLA--RNMGERYGELPRWPEVVPSQE 458
>gi|219130523|ref|XP_002185413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403127|gb|EEC43082.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 657
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 209/447 (46%), Gaps = 68/447 (15%)
Query: 16 KEKGGELLFCGSTCWDAVGRRKGALDG--NLVSPTRLRPLVGVDIRF--VAAGCVSCHCV 71
++ G LL G+ VGR K +L+ PTR + +D +F + C + H +
Sbjct: 217 QQPGYTLLQAGTLDSTIVGRVKIKTPEPYHLMVPTR----IAMDRKFTKIFTSCNAVHSI 272
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+D G Y WGRNE QLG PT + EL K+ A G+SHT++ D +
Sbjct: 273 AIDEAGVAYGWGRNESSQLGASLPNVVVLPTEL-ELPD-KVVGAALGKSHTILQLADQSL 330
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG 188
A G NK GQ G + E+ P+ +C+V E + +CG DF+V L S EG + + G
Sbjct: 331 WAVGANKAGQCGV-RVGTEVIPNFRKCVVPESVTIVQISCGEDFSVALDS-EG-YLYSTG 387
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLA-------------------YEAQPRPRAIAALAGE 229
+YGQLG+G EY + + A + + + + +
Sbjct: 388 SSEYGQLGNGETGEYFIAANKLGFANCNVFTKRSVFCHTPGENAHSSNAKDKVVPLAEDV 447
Query: 230 TIVKVACGTNHTVAV----DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR----N 281
I +ACG +H VAV D K V++WG G YG LGH Q DE+ PR + F N
Sbjct: 448 RIQSIACGKHHVVAVEAPSDQKPRVFSWGSGDYGCLGHGVQADEYFPRMIGGFINTPLGN 507
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
N + V++AG+ S G +Y WGK + G+ M P+ L+D+ N ++
Sbjct: 508 N---KDVVVTAGAHCSLIRTSNGHVYYWGKHRPVGEAVMRPQ-LVDVLANNQH-----DV 558
Query: 342 HHFVGADSSCI---------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
HF + + +WG +GELG G KSSA P V L+G V+ V CG
Sbjct: 559 RHFAAGAQTVVCSTSLGQTVAWGQGPHGELGLG--TPKSSAKPSFVSALDGAQVMDVVCG 616
Query: 393 YGHSLVIV-----DRTNVGERLDQLDV 414
YGH+L +V + T + L +LD+
Sbjct: 617 YGHTLYLVRGETPEDTKIIAGLAELDL 643
>gi|443897037|dbj|GAC74379.1| hypothetical protein PANT_11d00031 [Pseudozyma antarctica T-34]
Length = 547
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 206/457 (45%), Gaps = 61/457 (13%)
Query: 20 GELLFCGSTCWDAVGRRKGALDG----------NLVSPTRLRPLVGVDIRFVAAGCVSCH 69
G +L G W +GR K +G +L +P LR + V ++ + + SCH
Sbjct: 13 GRVLVTGGIDWPTLGR-KATKNGPPLSVNPDHPDLPAPHILRSVSNVRMKRIFSSHSSCH 71
Query: 70 CVAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SK 109
V + V+G Y GRNE GQ G D D T S K
Sbjct: 72 AVLLSVDGDVYIIGRNEHGQCGLPIRPVPGSSKPSGVAVWDAYMLDAATDFSPALPSGPK 131
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVT 164
+ A GRSHT+++T G+ + G N GQ G + + IE V
Sbjct: 132 GHVVAAACGRSHTLLITAGGSVYSAGLNTSGQCGHPESQTVPLFTRIETGAFIKERDPVV 191
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A +CG F++ L+ + + G + GQLG+G E+ T ++ +LA+ P +
Sbjct: 192 AASCGLTFSMLLT--QSGKLYTMGSSEKGQLGNGRTGEHFTSNN--RLAFNTFSEPFLVK 247
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
LA + I +ACG H++A+D +GYVY WGFGGYGRLG Q+D+ P V F R NVL
Sbjct: 248 QLADKNITSIACGQQHSIALDDQGYVYVWGFGGYGRLGLGSQQDQLTPTLVPQFARENVL 307
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMD----------LS 329
I AG NS+ G ++ GK K +GD +M K L D L
Sbjct: 308 MRAKSIYAGPTNSAVVDGQSMFWIAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNSGLG 367
Query: 330 GWNLRC--MDSGNMHHFVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G L C ++ ++ GA + I WG +A GELG G +S+ P + + L+G+ +
Sbjct: 368 GVTLLCTAIEEASLQGEHGATMN-ICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAI 426
Query: 387 ISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQD 423
+ +A + + N+GER +L + SQ+
Sbjct: 427 LDIAAAQNTTFYLAR--NMGERYGELPRWPEVVPSQE 461
>gi|323450873|gb|EGB06752.1| hypothetical protein AURANDRAFT_71948 [Aureococcus anophagefferens]
Length = 1603
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 201/415 (48%), Gaps = 36/415 (8%)
Query: 22 LLFCGSTCW---------DAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCV 71
L+ CGST W ++ GA SP + L GV + +V+ G + H +
Sbjct: 44 LVLCGSTDWVAAAKGAAGKQKQKQDGAQGDQFDSPVVVGGALAGVRVSYVSVGPSAGHVL 103
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK----KAGAGRSHTVVVTE 127
A +G+ + WG+N GQLG G K P +E + A G++HT+V+
Sbjct: 104 AFG-DGKVFAWGQNSHGQLGLGAKAAWCVPG-PTEAKAWSAPGTPVSAACGKNHTLVLYA 161
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEI-----EPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
DG + G + G LG G ++ +P V VS+ A G DF+ L+
Sbjct: 162 DGAVASAGCGERGALGHGDKAKDMPEMSHDPRVVEA-VSDAVCIAAGTDFS--LAGASTG 218
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVACGTNHT 241
+ + G ++G+LG G D YNTKDSS+KL Y A P + L AG V+V+ G NH
Sbjct: 219 KVYSWGWTEFGKLGQGDDGCYNTKDSSIKLTYTAAGAPGLVKGLPAGFEPVQVSAGKNHA 278
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS---- 297
A+ + G +TWG G YG+LGHR Q+ PR ++ + +++L ++ +
Sbjct: 279 AALGADGVGFTWGDGAYGKLGHRSQEQLNAPRALEGARFSSLLCGDSSTAGLGWPEYRGR 338
Query: 298 --SCTAGGGQLYMWGKLK-NNGDDWMYPKPLMDLSGWNL--RCMDSGNMHHFVGADSSCI 352
+ TAG G L++WG LK +G+ +P P DL GW + C+ G H +GA+ S +
Sbjct: 339 PFTKTAGDGMLFVWGVLKGTHGEGATHPVPNYDLQGWAIDKHCLGVGASHCALGAEGSAV 398
Query: 353 SWG--HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+W YG+LGYG G KSS K++D L+G G + + D +V
Sbjct: 399 AWALMPVAYGQLGYGDAGPKSSHRAKELDALKGAVTAQCVASSGQTHFLCDAASV 453
>gi|426196418|gb|EKV46346.1| hypothetical protein AGABI2DRAFT_193077, partial [Agaricus bisporus
var. bisporus H97]
Length = 530
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 199/421 (47%), Gaps = 40/421 (9%)
Query: 14 TGKEKGGELLFCGSTCWDAVGR--RKGA--------LDGNLVSPTRLRPLVGVDIRFVAA 63
TG+ + G +L CG T W +GR R G L+ +L+ P LR L V + V A
Sbjct: 15 TGQPQWGRVLICGGTDWPRLGRKDRPGTINPETGEPLNPDLLEPHILRSLSNVKVASVHA 74
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHG---------DKIQRDRPTIVSELSKYKIKK 114
C CH VA+D+EG + +GRN LG + + RPT + K
Sbjct: 75 SCAGCHFVAIDIEGNAWLFGRNGSSCLGTSGPGEEYISENAPRMVRPTDLGAQGDTKFVY 134
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP-VRCLVS----EVTATACG 169
A GR+HT++V DG+ G N GQ G S+ E+ V+ + + V + G
Sbjct: 135 AACGRNHTLLVGSDGSVWTAGVNNLGQCGH-SLSPEVSAFKGVKVIYNGSKEHVVQASAG 193
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
F++ L+ + + G + GQLG+GT E T + K A++ + +P + AL G+
Sbjct: 194 ITFSLVLT--DAGRVFAFGSAEKGQLGNGTTGERITTGN--KTAFDVEEKPIYVKALDGK 249
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
IV++A G H++A+D G VY WG+ GY RLG Q D P+ V F +
Sbjct: 250 NIVQIASGQQHSIALDDTGVVYVWGYNGYCRLGLGNQVDVLKPKPVPQFSGQSESALATT 309
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
++AG NS G +M GK KN+G+ + + + D+ G + SG + H+
Sbjct: 310 VAAGPTNSVVVDKQGLYHMAGKWKNSGEGSSGSPYSSFRFIQDIMGCKVSHPRSGGVTHW 369
Query: 345 V-----GADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ + WG +A GELG GP KSS P K + L + ++ +A G +L+
Sbjct: 370 LITPDDDGTPMTVCWGQNAANGELGLGPEEPKSSTKPTKNNPLAHIEILDIAAGQNTTLL 429
Query: 399 I 399
+
Sbjct: 430 L 430
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 96/272 (35%), Gaps = 82/272 (30%)
Query: 151 IEPSPVRCL----VSEVTATACGADFTV-------WLSSVEGASILNAGLPQYGQLGHGT 199
+EP +R L V+ V A+ G F WL G+S L G
Sbjct: 56 LEPHILRSLSNVKVASVHASCAGCHFVAIDIEGNAWLFGRNGSSCLGTS---------GP 106
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
EY ++++ + RP + A V ACG NHT+ V S G V+T G G
Sbjct: 107 GEEYISENAPRMV------RPTDLGAQGDTKFVYAACGRNHTLLVGSDGSVWTAGVNNLG 160
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+ GH + V F+ VI GS A G +
Sbjct: 161 QCGHSLSPE------VSAFKG------VKVIYNGSKEHVVQASAGITF------------ 196
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------ 373
+L D+G + F G A+ G+LG G G++ +
Sbjct: 197 ------------SLVLTDAGRVFAF----------GSAEKGQLGNGTTGERITTGNKTAF 234
Query: 374 ----MPKKVDILEGMHVISVACGYGHSLVIVD 401
P V L+G +++ +A G HS+ + D
Sbjct: 235 DVEEKPIYVKALDGKNIVQIASGQQHSIALDD 266
>gi|409081184|gb|EKM81543.1| hypothetical protein AGABI1DRAFT_111837 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 537
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 199/421 (47%), Gaps = 40/421 (9%)
Query: 14 TGKEKGGELLFCGSTCWDAVGR--RKGA--------LDGNLVSPTRLRPLVGVDIRFVAA 63
TG+ + G +L CG T W +GR R G L+ +L+ P LR L V + V A
Sbjct: 15 TGQPQWGRVLICGGTDWPRLGRKDRPGTINPETGEPLNPDLLEPHILRSLSNVKVASVHA 74
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHG---------DKIQRDRPTIVSELSKYKIKK 114
C CH VA+D+EG + +GRN LG + + RPT + K
Sbjct: 75 SCAGCHFVAIDIEGNAWLFGRNGSSCLGTSGPGEEYISENAPRMVRPTDLGAQGDTKFVY 134
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP-VRCLVS----EVTATACG 169
A GR+HT++V DG+ G N GQ G S+ E+ V+ + + V + G
Sbjct: 135 AACGRNHTLLVGSDGSVWTAGVNNLGQCGH-SLSPEVSAFKGVKVMYNGSKEYVVQASAG 193
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
F++ L+ + + G + GQLG+GT E T + K A++ + +P + AL G+
Sbjct: 194 ITFSLVLT--DAGRVFAFGSAEKGQLGNGTTGERITTGN--KTAFDVEEKPIYVKALDGK 249
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
IV++A G H++A+D G VY WG+ GY RLG Q D P+ V F +
Sbjct: 250 NIVQIASGQQHSIALDDTGVVYVWGYNGYCRLGLGNQVDVLKPKPVPQFSGQSESALATT 309
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
++AG NS G +M GK KN+G+ + + + D+ G + SG + H+
Sbjct: 310 VAAGPTNSVVVDKQGLYHMAGKWKNSGEGSSGSPYSSFRFIQDIMGCKVSHPRSGGVTHW 369
Query: 345 V-----GADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ + WG +A GELG GP KSS P K + L + ++ +A G +L+
Sbjct: 370 LITPDDDGTPMTVCWGQNAANGELGLGPEEPKSSTKPTKNNPLAHIEILDIAAGQNTTLL 429
Query: 399 I 399
+
Sbjct: 430 L 430
>gi|336368615|gb|EGN96958.1| hypothetical protein SERLA73DRAFT_185217 [Serpula lacrymans var.
lacrymans S7.3]
Length = 550
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 198/428 (46%), Gaps = 36/428 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRPLVG 55
+ AE+ + ++ G +L CG T W +GR++ + + +L+ P LR L
Sbjct: 8 IPAEEPPASISVDQQWGRVLICGGTDWPKLGRKERGGKSEKDESENPDLLEPHILRSLSN 67
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRN-ERGQLGHG--DKI-----QRDRPTIVSEL 107
V I + A C CH +A+D +G + +GRN LG D I +R R + +
Sbjct: 68 VKISSIHASCCGCHFIAIDTDGAAWMFGRNGPSAPLGVTGVDAISEKVPRRLRASDLGAP 127
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN----EIEPSPVRCLVSE- 162
K A GR H+++V +G + G N HGQ G ++ P E
Sbjct: 128 EYAKFVDAACGRGHSLLVDSEGQVWSAGINNHGQCGHSVCAQVSTFKLVDGPFHNGARER 187
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G F+V L+ E + G + GQLG+G E+ + K AY+ + P
Sbjct: 188 VIKAAAGITFSVVLT--ESGKVFTFGSGEKGQLGNGRTGEHIVTGN--KTAYDIEVEPIR 243
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L + IV+++CG HTVA+DS+G VY WG+ GY RLG Q+D +P+ V F N
Sbjct: 244 VRGLDDKKIVQISCGQQHTVALDSQGLVYVWGYNGYCRLGLGNQQDVLIPKIVPQFAGPN 303
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMD 337
A + AG N++ +M GK KN+G+ + + + D+ +
Sbjct: 304 EATMGAHVFAGPSNTAIIDNQKMYWMAGKWKNSGEGSSGSPYSSFRFMQDIMACKMSNAS 363
Query: 338 SGNMHHFVGAD-----SSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
G + HF D + ++WG +A GELG GP KS+ P + L G+ V S+A
Sbjct: 364 CGGVTHFALTDDDDGGTMTVAWGQNAANGELGLGPDEPKSATKPTRHQPLSGIQVFSIAA 423
Query: 392 GYGHSLVI 399
G +L +
Sbjct: 424 GQNTTLFL 431
>gi|336381401|gb|EGO22553.1| hypothetical protein SERLADRAFT_473539 [Serpula lacrymans var.
lacrymans S7.9]
Length = 553
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 198/428 (46%), Gaps = 36/428 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRPLVG 55
+ AE+ + ++ G +L CG T W +GR++ + + +L+ P LR L
Sbjct: 8 IPAEEPPASISVDQQWGRVLICGGTDWPKLGRKERGGKSEKDESENPDLLEPHILRSLSN 67
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRN-ERGQLGHG--DKI-----QRDRPTIVSEL 107
V I + A C CH +A+D +G + +GRN LG D I +R R + +
Sbjct: 68 VKISSIHASCCGCHFIAIDTDGAAWMFGRNGPSAPLGVTGVDAISEKVPRRLRASDLGAP 127
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN----EIEPSPVRCLVSE- 162
K A GR H+++V +G + G N HGQ G ++ P E
Sbjct: 128 EYAKFVDAACGRGHSLLVDSEGQVWSAGINNHGQCGHSVCAQVSTFKLVDGPFHNGARER 187
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G F+V L+ E + G + GQLG+G E+ + K AY+ + P
Sbjct: 188 VIKAAAGITFSVVLT--ESGKVFTFGSGEKGQLGNGRTGEHIVTGN--KTAYDIEVEPIR 243
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L + IV+++CG HTVA+DS+G VY WG+ GY RLG Q+D +P+ V F N
Sbjct: 244 VRGLDDKKIVQISCGQQHTVALDSQGLVYVWGYNGYCRLGLGNQQDVLIPKIVPQFAGPN 303
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMD 337
A + AG N++ +M GK KN+G+ + + + D+ +
Sbjct: 304 EATMGAHVFAGPSNTAIIDNQKMYWMAGKWKNSGEGSSGSPYSSFRFMQDIMACKMSNAS 363
Query: 338 SGNMHHFVGAD-----SSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
G + HF D + ++WG +A GELG GP KS+ P + L G+ V S+A
Sbjct: 364 CGGVTHFALTDDDDGGTMTVAWGQNAANGELGLGPDEPKSATKPTRHQPLSGIQVFSIAA 423
Query: 392 GYGHSLVI 399
G +L +
Sbjct: 424 GQNTTLFL 431
>gi|389738107|gb|EIM79311.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 602
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 190/413 (46%), Gaps = 40/413 (9%)
Query: 20 GELLFCGSTCWDAVGRR---KGALD--GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
G LL G T W +G+R G + +L+ P LR L V I V AGC CH +A+D
Sbjct: 14 GRLLIAGGTDWPKLGKRLPNNGEISEHPDLLDPHILRSLSNVKIVSVHAGCAGCHVIALD 73
Query: 75 VEGRCYTWGRNERGQLGHG--DKIQRDRP-----TIVSELSKYKIKKAGAGRSHTVVVTE 127
VEG+ + +GRN LG D I + P + + K A GR+H+++V
Sbjct: 74 VEGQAWLFGRNTSSALGVSGVDVISENAPWKLRAQDLGAAAGTKFVHAACGRAHSILVGS 133
Query: 128 DGNSLAFGWNKHGQLGS------GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
DG G N GQ G S R P + V + A G F++ L+ +
Sbjct: 134 DGRVWTAGVNLLGQCGHHPCPEITSFRRVDGPYNSSGAIQPVVSAAAGITFSLLLT--KD 191
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G + GQLG+G EY + K A++ + P + L + IV++ACG H+
Sbjct: 192 GQVYAMGSGEKGQLGNGRTGEYIATGN--KTAFDVESEPILVKGLTDKKIVQIACGQQHS 249
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+D G VY WG+ GY RLG +QKD +P+ V F + A+++AG NS
Sbjct: 250 IALDDTGVVYVWGYNGYCRLGLGDQKDVLIPKVVPQFAGPREMMMGAMVAAGPSNSVVVD 309
Query: 302 GGGQLYMWGKLKNNGD--------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--- 350
+M GK K GD + Y + +M +++ C G + HF A
Sbjct: 310 RQQMYWMAGKWKTTGDGSGGQPYSSFRYMQDIMACKTYHIAC---GGVTHFALAPDQDEP 366
Query: 351 ---CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
I+WG +A GELG G KS+ P + + L G+ V +VA G S +
Sbjct: 367 GVMTIAWGQNAVNGELGMGANEPKSATKPSRNEPLRGVDVFAVAGGQNTSYFL 419
>gi|392564985|gb|EIW58162.1| RCC1/BLIP-II [Trametes versicolor FP-101664 SS1]
Length = 547
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 195/413 (47%), Gaps = 37/413 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGAL-----DG------NLVSPTRLRPLVGVDIRFVAAGCVSC 68
G +L CG T W +G++ DG +L+ P LR L + + CVSC
Sbjct: 19 GRVLICGGTDWPRLGKKDKGGKKGQEDGSANTSPDLLEPHILRSLSNIKAASIHTSCVSC 78
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIVS--ELSKYK---IKKAGAGRSH 121
+C+ +DV+G + +GRN++ LG D I + P V+ +L K + AG G+SH
Sbjct: 79 YCIVIDVDGAAWMFGRNDKSCLGLTDVDAISENEPRRVTAQDLGAPKGTRLVTAGCGKSH 138
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
T++V +G + G N+ GQ G S + + + +V A G F+V L
Sbjct: 139 TLLVGSEGQLWSAGANQAGQCGHPACPQISTFKLVNGPKLGGVKEKVVQAAAGITFSVVL 198
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ E + G + GQL +G E S+ K A++ + P + L IVK+AC
Sbjct: 199 T--ESGKVFAFGSEEKGQLANGQAGERIV--SAGKSAFDYETEPILVRGLVERKIVKIAC 254
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G+ H +A+DS+G VY WG+ GY RLG Q+D VP+ + F N L A I+AG N
Sbjct: 255 GSQHAIALDSEGRVYGWGYNGYCRLGLGNQQDALVPKLIPQFAGPNELTMAADIAAGPSN 314
Query: 297 SSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS- 350
S YM GK KN GD + K + D+ G + G + H+ A
Sbjct: 315 SVVIDKQNMYYMAGKWKNTGDGSGGQPFSTFKLIQDIMGCKIVHAACGGVTHWAIAQEEE 374
Query: 351 ---CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
I++G A GELG GP KSS P + L G+ V+ +A G S ++
Sbjct: 375 GVMTITFGQGALNGELGLGPNEPKSSTKPLQHKPLTGIDVLQIAAGQNTSYIL 427
>gi|395332007|gb|EJF64387.1| RCC1/BLIP-II [Dichomitus squalens LYAD-421 SS1]
Length = 544
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 197/431 (45%), Gaps = 45/431 (10%)
Query: 16 KEKGGELLFCGSTCWDAVGRRKGALDGN--------LVSPTRLRPLVGVDIRFVAAGCVS 67
+++ G +L CG T W +G++ N L P LR L V + C
Sbjct: 15 EQQWGRVLLCGGTDWTRLGKKDKGGKKNQEDGTSTDLPEPHILRSLSNVQAVSIHTSCAG 74
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRP--TIVSELSKYK---IKKAGAGRS 120
CHCV +DV+G + +GRN++ +G D I + P EL K A GR+
Sbjct: 75 CHCVVLDVDGVAWMFGRNDKSCMGVTGVDAISENEPRRLTAQELGAPKGTRFVHAACGRN 134
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---------EVTATACGAD 171
HT++V DG + G N GQ G + EI P LV+ +V A G
Sbjct: 135 HTLLVGSDGQLWSAGQNHAGQCGHPACP-EI---PSFKLVNGPKLSGQKEKVVIAAAGIT 190
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
F++ L+ + + G + GQLG+G E S+ K A++ + P + LA I
Sbjct: 191 FSLVLT--DSGKVFAFGSEEKGQLGNGRAGERIV--SAGKSAFDFEEEPILVRGLAERKI 246
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V++ACG H +A+DS G V+ WG+ GY RLG Q D VP++V F N L A +
Sbjct: 247 VQIACGPQHAIALDSDGRVFVWGYNGYCRLGLGNQVDALVPKQVPQFAGPNELTMGAYVV 306
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
AG NS G +M GK KN GD + K + D+ G + G + H+
Sbjct: 307 AGPSNSVVIDKQGMYWMAGKWKNTGDGSGGQPFSTFKFIQDIMGCKIIHAACGGVTHWAL 366
Query: 347 ADSS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
A I++G A ELG+GP KS+ P + L G+ VI VA G + ++
Sbjct: 367 AQEDDGVMTIAFGQGALNSELGHGPDQPKSATKPIQNKPLAGIDVIQVAAGQNTTFLLA- 425
Query: 402 RTNVGERLDQL 412
R N E+ +L
Sbjct: 426 RPN--EKFSEL 434
>gi|449548155|gb|EMD39122.1| hypothetical protein CERSUDRAFT_46878, partial [Ceriporiopsis
subvermispora B]
Length = 529
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 187/407 (45%), Gaps = 45/407 (11%)
Query: 22 LLFCGSTCWDAVGRR----KGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
+L CG T W +GR+ K D +L+ P LR L + + C++CHC
Sbjct: 2 VLLCGGTDWPRLGRKDRGGKKKDDTAEIEPGPDLLEPHILRSLSLIKAVSIHTTCIACHC 61
Query: 71 VAVDVEGRCYTWGRNERGQLGHG--DKIQRDRP--TIVSELSKYK---IKKAGAGRSHTV 123
V +D++G + +GRNERG LG D I + P +L K A G++HT+
Sbjct: 62 VVLDIDGVAWLFGRNERGALGVAGVDAISENAPRRLTAQQLGASKGTRFVNAACGKNHTL 121
Query: 124 VVTEDGNSLAFGWNKHGQLG--------SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
+V DG G N +GQ G S + N + + + V A G F++
Sbjct: 122 LVGSDGQVWTSGINNNGQCGHPVCPEITSFKLVNGPKSNGAK---ERVKKAAAGTTFSIV 178
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ E + G ++GQLGHG E+ S+ K A++ + P + L + IV +A
Sbjct: 179 LT--ETGKVFAFGSGEHGQLGHGRTGEHIV--SAGKTAFDIEWEPIPVKGLDNKHIVDIA 234
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG H+VA+D++G V+ WG+ GY RLG QKD +P+ V F +N + I AG
Sbjct: 235 CGAQHSVALDAEGMVHVWGYNGYCRLGLGHQKDILIPQVVPQFAGSNEMTRADKIVAGPS 294
Query: 296 NSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
NS +M GK KN GD + + + DL G + G + H+ A
Sbjct: 295 NSVVIDKQKMYWMAGKWKNTGDGTCSVGQPYSSFRYIGDLMGVKITFAACGGVSHWALAL 354
Query: 349 SS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
I +G A GELG GP KS P + L G+ V+ +A
Sbjct: 355 DEDGLMTIVFGQGASNGELGLGPDEPKSVTKPAQHKRLIGIDVLQIA 401
>gi|134114942|ref|XP_773769.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256397|gb|EAL19122.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 560
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 194/425 (45%), Gaps = 29/425 (6%)
Query: 20 GELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
G +L CG T W GR++ G + +L+ P LR L V + G + + + +D+
Sbjct: 12 GRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGPSANYAIILDIH 71
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-----YKIKKAGAGRSHTVVVTEDGNS 131
G Y +GR +G I + P +S S K AGRSH ++V +G+
Sbjct: 72 GAAYLFGRPPAMVQSNG-VISENTPLKISPSSVGSPKGTKWVNGAAGRSHFLLVDSNGDV 130
Query: 132 LAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G N GQ+G ++ VR ++V G F+++L+ +
Sbjct: 131 WGCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLFLTFT--GQVYA 188
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
+G ++GQLG+G E K K+AY+ + PR + L I ++A G H++A+D
Sbjct: 189 SGSSEFGQLGNGKTGERLVKAG--KIAYDIEVPPRLVQGLENVKITEIASGNQHSLALDD 246
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
GYVY+WGF GY RLG ++QKD +P V F NN L I+ G +S+ +
Sbjct: 247 NGYVYSWGFAGYSRLGLQDQKDRLLPTIVPSFAGNNELTRARSIACGPTSSTVVDRQNMI 306
Query: 307 YMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSSCISWGHAQ 358
+ GK K +GD + K + D+ + SG HF+ + ++ G Q
Sbjct: 307 LIAGKWKLSGDGSTGQPYTRFKHIQDVMACKVIKTSSGGCTHFITTPDPEGGVMTVGFGQ 366
Query: 359 ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVY 415
YGELG G KS+ P+K+ L G+ +I V G +L + + LD+ ++
Sbjct: 367 GVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLARPNSALSDLDRYPLH 426
Query: 416 DGKAS 420
AS
Sbjct: 427 INSAS 431
>gi|302681079|ref|XP_003030221.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
gi|300103912|gb|EFI95318.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
Length = 550
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 169/383 (44%), Gaps = 30/383 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRP 101
+L+ P LR L V V C SCH V +DV+G + +GRN GQLG G I + P
Sbjct: 63 DLLEPHILRSLSNVRAVSVHTSCCSCHNVVIDVDGSAWLFGRNAHGQLGVPGTAISENAP 122
Query: 102 TIVS--EL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
++ EL + A GR HT++V ++G A G N GQ G + V
Sbjct: 123 RRLTPRELGASPTARFVHAACGRYHTLLVADEGQVWAAGANTLGQCGQDVCPEINKFRRV 182
Query: 157 RCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
L E V A G F+V L+ + + G + GQLG+G E V
Sbjct: 183 SVLDREDNEEHVVKAAAGISFSVVLT--KSGKLYAFGSAEKGQLGNGDTGERLATGQRVV 240
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
E P I LA TIV V+ G H +A+D G V+ WG+ GY RLG +QKD
Sbjct: 241 FGIETVPL--LIKELANRTIVDVSAGQQHCIAIDDAGVVFVWGYNGYCRLGLGDQKDRLK 298
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLM 326
P V F + ++++AG NS G YM GK KN+G+ W Y KP+
Sbjct: 299 PVVVPHFAGPKEISMGSLVTAGPTNSVVVDKQGVYYMAGKWKNSGEGSVGSPWTYFKPIQ 358
Query: 327 DLSGWNLRCMDSGNMHHFVGADSS---------CISWG-HAQYGELGYGPYGQKSSAMPK 376
D+ + G + HF + + WG +A GELG GP KS+
Sbjct: 359 DIMACRTTHVSCGGVTHFALTPNDEAGHEGKNMTVCWGQNAANGELGLGPDENKSATKAT 418
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
K L + VI VA G +L I
Sbjct: 419 KNKPLLEVDVIDVAAGQHTTLFI 441
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 152 bits (383), Expect = 6e-34, Method: Composition-based stats.
Identities = 123/418 (29%), Positives = 188/418 (44%), Gaps = 79/418 (18%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C H +AVD Y+WG ++ GQLGHG K + + RP ++ EL+ KI+ AG +H +
Sbjct: 1184 CGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNI 1243
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----------SEVTATACGADFT 173
V+ + G +FG+ GQLG+GS ++ P+ + ++T ACG +
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
V S E + + GL + GQLGH +E +PR I L G + K
Sbjct: 1304 VICS--ENGEVYSWGLGKQGQLGHKV--------------FENISKPRLIETLRG--VTK 1345
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
++CG HTVA VY+WG G + +LGH KDE VP+ VD F + NV
Sbjct: 1346 ISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNV---------- 1395
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI- 352
S G +N+ +P DL+ N D NM+ G SS I
Sbjct: 1396 ---SKVVCG----------QNHTMTITFPD---DLNNSNQDDEDEENMN---GKSSSPIY 1436
Query: 353 SWGHAQYGELGYG-----PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV-- 405
+WG A++G+LG G P+ K +P + + +++I ++CG S +I +
Sbjct: 1437 AWGSAEHGKLGLGGDLKSPFFDK--PIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYV 1494
Query: 406 --GERLDQLDVYDGKASSQD---NEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEE 458
R Q+ G + D I N + P G + N KK++ S++ EE
Sbjct: 1495 WGCGRFGQI----GNGKNDDVWVPTRISLNDSTKPNFGGLQADN--KKQRYSQEGLEE 1546
Score = 103 bits (256), Expect = 3e-19, Method: Composition-based stats.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTAT 166
K K G H V+T+DG +G N+ GQLG G N+ P R S +
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
CG + T+ + S + + G ++GQLGHGT +V Q RP+ I L
Sbjct: 1183 ECGGEHTIAVDS--NYFVYSWGSDKFGQLGHGT--------KAVN-----QSRPKVIEEL 1227
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G+ I +A G H + + G ++++G+G +G+LG + +P R+++ L
Sbjct: 1228 TGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQH 1287
Query: 287 E-----AVISAGSVNSSCTAGGGQLYMWGKLKNNG------DDWMYPKPLMDLSGWNLRC 335
I+ G +S + G++Y WG K ++ P+ + L G +
Sbjct: 1288 HDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG--VTK 1345
Query: 336 MDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G+ H D + SWG ++ +LG+ K ++PK VD +V V CG
Sbjct: 1346 ISCGHFHTVATTDLKNVYSWGSGEHMKLGHS--SDKDESVPKVVDFFIQKNVSKVVCGQN 1403
Query: 395 HSLVIV---DRTNVGERLDQLDVYDGKASS 421
H++ I D N + + + +GK+SS
Sbjct: 1404 HTMTITFPDDLNNSNQDDEDEENMNGKSSS 1433
Score = 71.6 bits (174), Expect = 9e-10, Method: Composition-based stats.
Identities = 97/397 (24%), Positives = 166/397 (41%), Gaps = 63/397 (15%)
Query: 147 IRNEIEPSPVRCLVSEVTA--TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
I E++ P+ L +E A +CG D ++ + + G Q GQLGHG E N
Sbjct: 1106 IDPELKRFPMAPLKNEKKAIKVSCGWDHIAVIT--DDGELYTWGSNQSGQLGHGL--EVN 1161
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
S P+ + G++ I V CG HT+AVDS +VY+WG +G+LGH
Sbjct: 1162 KTLS----------LPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGH 1211
Query: 264 REQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNGDDWM 320
+ ++ P+ ++ + I+AG ++ G+L+ +G G
Sbjct: 1212 GTKAVNQSRPKVIEELTGQKI----QAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSF 1267
Query: 321 YPKP-------------LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
+ K L G + + G H + +++ + SWG + G+LG+
Sbjct: 1268 HSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKV 1327
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV-----GERLDQLDVYDGKASS 421
+ S P+ ++ L G V ++CG+ H++ D NV GE + G +S
Sbjct: 1328 FENISK--PRLIETLRG--VTKISCGHFHTVATTDLKNVYSWGSGEHMKL-----GHSSD 1378
Query: 422 QDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQANGQSE 481
+D E + + +K +KV ++ + ++ N+ + D+ EE NG+S
Sbjct: 1379 KD-ESVPKVVDFFIQKNVSKVVCG-----QNHTMTITFPDDLNNSNQDDEDEENMNGKSS 1432
Query: 482 RKKQAGGKASGRGRGKAANKLSGDGKGTGRGRGRPTS 518
A G A GK L GD K + PT+
Sbjct: 1433 SPIYAWGSAE---HGKLG--LGGDLKSPFFDKPIPTA 1464
>gi|170101426|ref|XP_001881930.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643285|gb|EDR07538.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 533
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 220/522 (42%), Gaps = 62/522 (11%)
Query: 22 LLFCGSTCWDAVGRR---------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+L CG T W +GR+ + +L+ P LR L+ V + + C CH V
Sbjct: 4 VLICGGTDWPKLGRKDRNPAKATPSEVQNPDLLEPNLLRSLLNVKVTSIHGSCSGCHFVV 63
Query: 73 VDVEGRCYTWGRNERGQLGHG---------DKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
+D+ G + +GRN LG + + +P + + A GR+HT+
Sbjct: 64 LDISGSAWLFGRNGSSALGLPASTTEYVSENAPKEVKPQDLGAAPGVRFVHAACGRNHTL 123
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-------PVRC--LVSEVTATACGADFTV 174
+V G A G N GQ +R + P PV V V A G F++
Sbjct: 124 LVGSCGTVWAAGANTLGQ-----VRVNVCPEVPSFKSVPVTHGGNVEHVVQAAAGITFSI 178
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ E + + G + GQLG+GT E + K Y+ + +P + L G+ IV++
Sbjct: 179 VLT--ESGKVFSFGSAEKGQLGNGTTGERIITGN--KTGYDIEVQPVYLKELDGKKIVQI 234
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G HT+A+DS G VY WG+ GY RLG Q D P+ V F N + I+AG
Sbjct: 235 ASGQQHTLALDSTGLVYVWGYNGYCRLGLGNQVDALKPKVVPQFAGPNEATMASAIAAGP 294
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKP------LMDLSGWNLRCMDSGNMHHFVGA- 347
NS G +M GK KN+G+ P + D+ G + SG + H++
Sbjct: 295 SNSVAVDKQGMYWMAGKWKNSGEAGSSGSPYSTFRFMQDIMGCKILLARSGGVTHWLLTP 354
Query: 348 --DSSCIS--WG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D S ++ WG +A GELG G KS+ P + L G+ V +A G +L++
Sbjct: 355 DDDGSVMTVCWGQNAANGELGLGQDEPKSATKPTRNIPLVGIDVFDIAAGQNTTLLLAKP 414
Query: 403 TNVGERLDQLDVYDGKASS--------QDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKD 454
E+ D L + + QDN E D +S + D
Sbjct: 415 N---EKFDDLPRHPEDVDAPLFCVKCGQDNGEDDSPLECDKCDSPWHLSCLTPPLSAVPD 471
Query: 455 S---SEEEEEEENSDYESDDSEEQANGQSERKKQAGGKASGR 493
+ E++ + + E+ A G+S RK GG A+ R
Sbjct: 472 GEWFCPDCEDDPGAPVGAWKQEKPAKGKSGRKPAVGGVANKR 513
>gi|403413890|emb|CCM00590.1| predicted protein [Fibroporia radiculosa]
Length = 557
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 192/423 (45%), Gaps = 50/423 (11%)
Query: 20 GELLFCGSTCWDAVGRR------KGALDGN-----LVSPTRLRPLVGVDIRFVAAGCVSC 68
G +L CG T W +GR+ K A + N L+ P LR L + + CV C
Sbjct: 22 GRVLICGGTDWPKLGRKDRGGASKKAQEVNVGGPDLLEPHILRSLSNIKAASIHTSCVGC 81
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVS--ELSKYK---IKKAGAGRSH 121
H V +D +G + +GRNER LG D I + P ++ +L K A GRSH
Sbjct: 82 HIVVLDTDGVAWLFGRNERSSLGFPGVDAISENAPRSLTAQDLGSQKGTRFVHAACGRSH 141
Query: 122 TVVVTEDGNSLAFGWNKHGQ--------LGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
T++V G G N GQ + + + N I+ V+ V A G F+
Sbjct: 142 TLLVGSGGQLWTSGANNAGQCAHPPCAEISTFKLVNGIKHGNVK---ENVVQAAAGVTFS 198
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ L+ + + + G ++GQLG+G E+ ++ K A++ + P + L + IV+
Sbjct: 199 IVLT--QSGKVFSFGSGEHGQLGNGKTGEHIV--TAGKTAFDIEWEPLLVRGLDDKVIVQ 254
Query: 234 VACGTNHTVAVDSKG------YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ACG H+VA+DS G VY WG+ GY RLG Q+D +P+ V F N
Sbjct: 255 IACGQQHSVALDSTGSAVHVAIVYVWGYNGYCRLGLGNQQDVLIPKVVPQFAGPNEPTMG 314
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMH 342
A I AG N+ +M GK K GD + + L D+ G + G +
Sbjct: 315 AEIIAGPSNTVVIDKQRMYWMAGKWKTTGDGSSGQPYSTFRYLQDIMGCKITHAACGGVT 374
Query: 343 HFVGADSS-----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
H+ + I++G A GELG GP+ KS+ P + L G+ V+ VA +
Sbjct: 375 HWALSPDDDGGIMTIAFGQGAANGELGLGPHEAKSATKPTRHQPLIGIDVLQVAAAQNTT 434
Query: 397 LVI 399
L++
Sbjct: 435 LLL 437
>gi|402223780|gb|EJU03844.1| RCC1/BLIP-II [Dacryopinax sp. DJM-731 SS1]
Length = 551
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 185/421 (43%), Gaps = 37/421 (8%)
Query: 12 EETGKEKGGELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSC 68
++T KEK G +L CG T W A+G++ D +L P LR L V V C
Sbjct: 9 DQTEKEKWGRVLLCGGTNWLALGKKGLPADPEYPDLPLPHTLRSLSNVKATGVYTSHSGC 68
Query: 69 HCVAVDVEGRCYTWGRNERGQLG--HGDKI-------QRDRPTIVSELSKYKIKKAGAGR 119
H + +DV G Y +GRN LG H + R PT V K A GR
Sbjct: 69 HVIVLDVAGAAYLFGRNTSSCLGVPHTSRPFISQYTPLRLLPTDVGAAPGTKFVYAACGR 128
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-----IRNEIEPSPVRCLVSE--VTATACGADF 172
+H+V+V ++G+ G N HGQ G + I R V E V A+A G +F
Sbjct: 129 AHSVLVGDEGSVWTAGLNAHGQCGHPAGGEMGTWKLITGGWARAKVGEKAVQASA-GVNF 187
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
T+ L+ E + G ++GQL +G E + + E +P P L +
Sbjct: 188 TLVLT--ENGKVYAFGSGEHGQLANGRTGERIAQANKTTYDIEDEPIP-VRGPLEDKVTT 244
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+VACG H +A+ S G VY WGF GY RLG KD +P V + NVL A ++A
Sbjct: 245 QVACGQQHAIALTSDGLVYVWGFNGYCRLGLGHPKDMLIPTLVPQYAGPNVLMRAAFVAA 304
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN-----GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
G ++ L M GK K + G + + ++ G + +G + HF A
Sbjct: 305 GPTSTIVIDRQKMLQMAGKFKTSGAGSVGQPFSTFRYFPEIQGCKVLLAAAGGVTHFATA 364
Query: 348 DSS--------CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
I+WG +A ELG G KS+ P +++ L G+ V ++A G S
Sbjct: 365 VDEDAGPGGVMTIAWGQNAINSELGLGEGQPKSTPKPVRMETLNGIDVFALAAGQNTSFF 424
Query: 399 I 399
+
Sbjct: 425 L 425
>gi|299744444|ref|XP_001831041.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
gi|298406129|gb|EAU90663.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
Length = 542
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 174/388 (44%), Gaps = 26/388 (6%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G + +L+ P LR L+ V I + C CH VA+D+ G + +GRN LG
Sbjct: 18 GENDAIFNPDLLEPNILRSLLNVKIVSIHTSCAGCHFVALDIHGTAWLFGRNGFSCLGIA 77
Query: 94 D-------KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
D +PT + K A GR+HT++V DG+ A G N GQ G
Sbjct: 78 DVDYVSENAPVPLKPTDLGAPQGTKFVHAACGRNHTLLVGSDGSVWAAGANNVGQCGQPP 137
Query: 147 IRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ PV + +V + G F++ L+ + + G + GQLG+G E
Sbjct: 138 SPDVPAFKPVSVVHGGNREKVVQASAGISFSLVLTDT--GKVFSFGSAEKGQLGNGVTGE 195
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ K ++ + +P + L + +VK++ G H++A+D G VY WGF GY RLG
Sbjct: 196 RILTGN--KTGFDIEWQPVFVKELKDKKVVKISSGQQHSLAIDDAGTVYGWGFNGYCRLG 253
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----- 317
Q D P+ + F A I+AG +S G +M GK KN+G+
Sbjct: 254 LGNQVDALKPKVIPQFAGPEEATMGADIAAGPTSSIVIDKQGMFWMAGKWKNSGEGSSGS 313
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-----DSSCISWG-HAQYGELGYGPYGQKS 371
+ + + D+ G + SG + H++ + WG +A GELG G KS
Sbjct: 314 PYSTFRFMQDIMGCKILLARSGGVTHWLTTPDEDGSPMTVCWGQNAANGELGLGLDEPKS 373
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
S P K L G+HVI +A G +L++
Sbjct: 374 STKPTKNMPLSGIHVIDIAAGQNTTLLL 401
>gi|405122279|gb|AFR97046.1| RCC2 protein [Cryptococcus neoformans var. grubii H99]
Length = 547
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 191/428 (44%), Gaps = 39/428 (9%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
M E G +L CG T W +L+ P LR L V + G +
Sbjct: 1 MANESVEGSTWGRVLICGGTDWPT----------DLMEPHILRSLCNVKASKIITGPSAN 50
Query: 69 HCVAVDVEGRCYTWGR-----NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
+ + +D+ G Y +GR G + + + P+ V K AGRSH +
Sbjct: 51 YAIVLDIHGATYLFGRPPAMVQSNGVISESTPL-KISPSSVGSPKGTKWVNGAAGRSHFL 109
Query: 124 VVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSP---VRCLVSEVTATACGADFTVWLSS 178
+V G+ G N GQ+G ++ +++ V+ ++V G F+++L+S
Sbjct: 110 LVDSKGDVWGCGNNVFGQIGVPVATVVDKLTKVTGPWVKDPEAKVVQVTAGHTFSLFLTS 169
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ +G ++GQLG+G E K K+AY+ + PR + I+++A G
Sbjct: 170 T--GQVYASGSSEFGQLGNGKTGERLVKAG--KIAYDIEVPPRLVQGFENVKIIEIASGN 225
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H++A+D GYVY+WGF GY RLG ++QKD +P V F NN L I+ G +S+
Sbjct: 226 QHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLLPTIVPSFAGNNELTRARSIACGPTSST 285
Query: 299 CTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFV---GADSS 350
+ + GK K +GD + K + D+ + SG HF+ +
Sbjct: 286 VIDRQNMILIAGKWKLSGDGSTGQPYTRFKHIQDVMACKVIKTSSGGCTHFIITPDPEGG 345
Query: 351 CISWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
++ G Q YGELG G KS+ P+K+ L G+ +I V G +L + R N+
Sbjct: 346 VMTVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLA-RPNLA- 403
Query: 408 RLDQLDVY 415
L LD Y
Sbjct: 404 -LSDLDRY 410
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ TWGR E GQLGHGD R PTI+S L +I
Sbjct: 16 VLLISAG--ASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVIC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E + ++GW G+LG G+ + P P+R L ++ ACG D
Sbjct: 74 GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACG-DSHCL 132
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG GT T+DS V P+ I A G I VA
Sbjct: 133 AVTMEG-QVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFQGVPIKMVA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++KD VP +V + ++ +++ G
Sbjct: 178 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMV----MVACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L L G + + G H V +D
Sbjct: 234 HTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSD 293
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G +SS P +V + VI ++CG+ H+L + +R NV
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSS--PVQVKLPLEQKVILISCGWRHTLAVTERQNV 348
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 133/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P +R L G+ I+ +A C HC+AV +EG+ +WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA--CGDSHCLAVTMEGQVQSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG HT VTEDG +GW ++G LG G ++
Sbjct: 151 LGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKD 210
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E + ACG T+ +SS G + G +YGQLGHG
Sbjct: 211 RLVPEKVSLPHGEKMVMVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 259
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
Y P + AL G I +++ G HT+AV S G +Y WG+ +G++G + D
Sbjct: 260 -----YADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 314
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V + V+ +IS G ++ ++ WG+ N
Sbjct: 315 RSSPVQVKLPLEQKVI----LISCGWRHTLAVTERQNVFSWGRGTN 356
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L G I ++ G H +AV +G+ Y WG N+ GQ+G GD + R P V
Sbjct: 266 PHQLEALQGSFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKL 323
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
+ K+ G HT+ VTE N ++G +GQLG+G + P ++ L
Sbjct: 324 PLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKAL 376
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 53/393 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ I+ + C S H +A+D G+ +WGR E GQLGH P+I+ E
Sbjct: 100 PQEVVSLAGLSIKLIT--CGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDE 157
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----E 162
L+ ++K+ G + + + E G +G N++GQLG G + P R L S
Sbjct: 158 LASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIP---RMLPSMNHRH 214
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACGA V L++ + G YGQLGHG ++ + P++
Sbjct: 215 VHLMACGAAHIVVLTTSR--DVYTWGNNSYGQLGHGFRKKHCLQ-------------PKS 259
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ ++G I ++ G NH+ + S G +YTWG G +G+LGH + + + +P +
Sbjct: 260 VRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKT 319
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK--------------LKNN--GDDWMYPKPLM 326
++I +G+ G +Y WG+ K+N D + PK +
Sbjct: 320 ---QASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIIS 376
Query: 327 DLS------GWNLRCMDSGNMHHFVGADS---SCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ +L + G+ HH + + +WG ++G+LG P +P++
Sbjct: 377 FFAASEEHDAISLSSISCGS-HHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQE 435
Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
V ++GM V++ AC HS+V+ G + D
Sbjct: 436 VKKMKGMIVLAAACSENHSVVVATMPGSGPKGD 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 44/264 (16%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P +R + G+DI+ + AG H + G YTWGR + GQLGHGD +D PT++
Sbjct: 255 LQPKSVRVMSGLDIKQIVAG--ENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLL 312
Query: 105 SEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNE-----IEP 153
S L K + +G + +T G ++G N GQLG G S N I P
Sbjct: 313 SPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISP 372
Query: 154 SPVRCLVSE-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ + +++ +CG+ + ++ + ++ G ++GQLG + +
Sbjct: 373 KIISFFAASEEHDAISLSSISCGSHHVLAITE-KKDTLFAWGRGEHGQLG------LDPR 425
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS------KG--YVYTWGFGGY 258
D+S + P P+ + + G ++ AC NH+V V + KG V++WG G +
Sbjct: 426 DTSFR------PIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSF 479
Query: 259 GRLGHREQKDEWVPRRVDVFQRNN 282
G+LG+ K VP + Q N
Sbjct: 480 GQLGYGSGK---VPVMKETVQDNQ 500
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 166/360 (46%), Gaps = 31/360 (8%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV + +A + H VA+ +WGR E GQLGHGD +R PTIVS L +I
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISS 70
Query: 115 AGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADF 172
G HT ++ ++ ++GW G+LG G+ + P P++ L EV ACG
Sbjct: 71 VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSH 130
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L+ +L G Q GQLG G + T P + A G +
Sbjct: 131 C--LAITTDGEVLGWGRNQNGQLGLGHTEDVLT--------------PHKLTAFEGVAVK 174
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+A G HT AV G +Y WG+G YG LG +++D VP +V + +++
Sbjct: 175 MLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELM----KMVAC 230
Query: 293 GSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-V 345
G ++ C A G +Y +G K +GD D + P + L ++ + G H F +
Sbjct: 231 GWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFAL 290
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D WG ++G++G G +SS P+ V L+ V V CG+ H+L + DR NV
Sbjct: 291 DSDGRLYGWGWNKFGQVGCGNTEDQSS--PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNV 348
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 22/260 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P +L GV ++ +AAG + H AV G+ Y WG G LG GD+ R P
Sbjct: 158 DVLTPHKLTAFEGVAVKMLAAG--AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPD 215
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V+ ++ +K G HT+ V E GN FGW+K+GQLG G + + P V+ L S+
Sbjct: 216 QVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSK 275
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ A G T L S + G ++GQ+G G NT+D Q P+
Sbjct: 276 KIQAITGGWRHTFALDS--DGRLYGWGWNKFGQVGCG-----NTED---------QSSPQ 319
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L + + V CG HT+A+ +G VY+WG G G+LGH + D P+R+++ +
Sbjct: 320 LVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSD 379
Query: 282 NVLPPEAVISAGSVNSSCTA 301
E + S+GS N CT+
Sbjct: 380 G-FACEQIESSGSSN--CTS 396
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 33/344 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT + L +I V C + H A+ + Y+WG + G+LGHG+ P +
Sbjct: 57 PTIVSALDDCEISSVT--CGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK 114
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L ++K+ G SH + +T DG L +G N++GQLG G + + P + V
Sbjct: 115 ALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK 174
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A GA+ T + E + G +YG LG G D +L P +A
Sbjct: 175 MLAAGAEHTT--AVTENGKLYGWGWGRYGNLGLG--------DREDRLV------PDQVA 218
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
A+AGE + VACG HT+ V G +YT+G+ YG+LGH + D +P +V + +
Sbjct: 219 AVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKI- 277
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDS 338
I+ G ++ G+LY WG K N +D P+ + L + +
Sbjct: 278 ---QAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQC 334
Query: 339 GNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
G H D + SWG G+LG+G +S+ PK+++IL
Sbjct: 335 GWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRST--PKRIEIL 376
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +++ L I+ + G H A+D +GR Y WG N+ GQ+G G+ + P +V
Sbjct: 266 PHQVQALKSKKIQAITGGWR--HTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG 323
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA- 165
L + G HT+ +T+ GN ++G GQLG G + P + L S+ A
Sbjct: 324 LQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFAC 383
Query: 166 --------TACGADFTVWLSSVEGASIL 185
+ C + + W+S E +++
Sbjct: 384 EQIESSGSSNCTSKTSNWISPAERYAVV 411
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 169/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ TWGR E GQLGHGD R PT++S I
Sbjct: 16 VVLVSAG--ASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVIC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +ED + + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHC-- 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ +L+ G Q GQLG GT T+DS + P+ I A G ++ +A
Sbjct: 132 LAVTMAGEVLSWGRNQNGQLGLGT-----TEDSLL---------PQTIQAFEGISVKMIA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +VP +V + + ++ +++ G
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV----LVACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P + L + + G H + +D
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G S P +V+ E V VACG+ H+L ++ NV
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCS--PAQVNFPEEQKVAQVACGWRHTLAFTEKKNV 348
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA--CGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + + + ACG T+ +SS S+ G +YGQLGHG
Sbjct: 211 RFVPEKVSSVEGDKMVLVACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 259
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL + +++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 260 -----FEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P +V+ + V A ++ G ++ ++ WG+
Sbjct: 315 HCSPAQVNFPEEQKV----AQVACGWRHTLAFTEKKNVFAWGR 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
A+A A +V V+ G +H+VA+ + + TWG G G+LGH + +D VP + F
Sbjct: 7 AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP 66
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
+ +VI ++ + Q+Y W G+L + N D P+P+ L G ++
Sbjct: 67 GI---TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G+ H V +SWG Q G+LG G + S +P+ + EG+ V +A G
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLLPQTIQAFEGISVKMIAAGAE 181
Query: 395 HSLVIVDRTNV 405
H+ + + ++
Sbjct: 182 HTAAVTEDGDI 192
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G+ Y WG N+ GQ+G GD P V+ + K+ + G HT+ TE
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEK 345
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
N A+G GQLG G I + P + L
Sbjct: 346 KNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
V+C H +A + + WGR GQLGHG+ + R+ P I+ LS
Sbjct: 332 VACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 140 bits (352), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 28/247 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIV 104
+P RL G + C H + VD + Y+WG+++ GQLGHG K + ++RP I+
Sbjct: 1262 TPKRLEFFRGKS-PIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKII 1320
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---- 160
++S KI+ AG +HT+V+ + G +FG+ GQLG GS ++ P+ +
Sbjct: 1321 EDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGI 1380
Query: 161 ----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
++T ACG +V S + + + GL + GQLGHG YE+
Sbjct: 1381 QHGGGKITQIACGFGHSVICS--DNGEVYSWGLGKQGQLGHGN--------------YES 1424
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
RPR I AL G + K++CG +T+A VY+WG G + +LGH K+E PR VD
Sbjct: 1425 IARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVD 1482
Query: 277 VFQRNNV 283
F + NV
Sbjct: 1483 FFIQKNV 1489
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTATACG 169
K G H +++E G +G N+ GQLG G +I+ +P R S + CG
Sbjct: 1222 KVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECG 1281
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ + S + + G ++GQLGHGT + +Q RP+ I ++G+
Sbjct: 1282 GEHSICVDS--DYVVYSWGQDKFGQLGHGTKSV-------------SQNRPKIIEDISGQ 1326
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE-- 287
I +A G HT+ + G +Y++G+G G+LGH + +P R+++ N ++ +
Sbjct: 1327 KIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIEL---NTIVGIQHG 1383
Query: 288 ----AVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMD 337
I+ G +S + G++Y WG K N + P+ + L G + +
Sbjct: 1384 GGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKIS 1441
Query: 338 SGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+ + D + SWG ++ +LG+G K+ A P+ VD +V + CG H+
Sbjct: 1442 CGHFYTMATTDLKNVYSWGLGEHMKLGHG--SDKNEATPRVVDFFIQKNVSKIVCGLNHT 1499
Query: 397 LVI 399
+ +
Sbjct: 1500 ITL 1502
Score = 101 bits (252), Expect = 8e-19, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 71/294 (24%)
Query: 42 GNLVS---PTR--LRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G+ VS PTR L +VG+ + C H V G Y+WG ++GQLGHG
Sbjct: 1361 GSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHG 1420
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
+ RP ++ L + K G +T+ T+ N ++G +H +LG GS +NE P
Sbjct: 1421 NYESIARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATP 1478
Query: 154 SPVRCLVSE-VTATACGADFTVWLS----------------------------------- 177
V + + V+ CG + T+ L+
Sbjct: 1479 RVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSL 1538
Query: 178 ----------------SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ + + I G ++G+LG G D +K + +P P
Sbjct: 1539 TNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGD---------LKSPFFDKPIPT 1589
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
AI + ++ ++CGT+ T + S G +Y WG+G +G++G+ + D WVP R+
Sbjct: 1590 AIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRI 1643
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 170/358 (47%), Gaps = 35/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L I
Sbjct: 16 VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIAC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E N L ++GW G+LG G+ + + P P+ L + ACG D
Sbjct: 74 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 132
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G NT+DS V P+ I A G I VA
Sbjct: 133 AVTMEG-EVQSWGRNQNGQLGLG-----NTEDSLV---------PQKIQAFKGVPIKMVA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H+VA+ G +Y WG+G YG LG ++ D W P +V + ++ +++ G
Sbjct: 178 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMV----MVACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G +Y +G K N +D + P+ L LS L SG H + S
Sbjct: 234 HTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 292
Query: 350 S--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ WG ++G++G G S P +V + V+ ++CG+ H++ + ++ NV
Sbjct: 293 TGLLFGWGWNKFGQVGVGDNLDHCS--PVQVKFPQDQRVVQISCGWRHTIAVTEKENV 348
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L+ P + L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + IK AG H+V +TE+G +GW ++G LG G +
Sbjct: 151 LGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + ++ ACG T+ +SS G I G +YGQLGHG N +DS
Sbjct: 211 RWNPEKVSSVDCDKMVMVACGWRHTISVSSSGG--IYTYGWSKYGQLGHG-----NFEDS 263
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P+ + AL+ + I +V+ G H++A+ S G ++ WG+ +G++G + D
Sbjct: 264 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLD 314
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V Q V+ IS G ++ ++ WG+ N
Sbjct: 315 HCSPVQVKFPQDQRVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 356
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C H ++V G YT+G ++ GQLGHG+ P + LS I + G
Sbjct: 224 KMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 283
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
H++ +T G +GWNK GQ+G G + P V+ + V +CG T+ +
Sbjct: 284 WRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTI--A 341
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E ++ + G GQLGHG + N+ L+ + P
Sbjct: 342 VTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGSAGPH 385
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
D R V C H +AV + ++WGR GQLGHGD I R+ P I+ LS
Sbjct: 326 DQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 15/264 (5%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC---YTWGRNERGQLGHGDKIQRDRPTI 103
P +R L +R V+ C H V +G YT+GRN+ GQLGH D I R P
Sbjct: 691 PKIIRSLENKIVRLVS--CSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQF 748
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVS 161
V LS +I G+ HT+VVT G + AFG N +GQLG ++ N++ P VR
Sbjct: 749 VEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQ 808
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E CG T+ L S GA + G YGQLG G N +T S+++L + R
Sbjct: 809 ECLEIRCGYYHTIALCS--GAHLFAFGRNDYGQLGLGRSNASST--SNLQLQQQRFSNAR 864
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I L G+ IV++ACG HT+AV G +Y +G +G+LG + + P +D F
Sbjct: 865 LIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGK 924
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQ 305
V A+++AG ++ GG +
Sbjct: 925 RV----ALVAAGFYHTVVLTGGKE 944
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
E ++ G+N G+LGHGD R + L + +I + GAG HTVV+T DG G
Sbjct: 561 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC--GADFTVWLSSVEGASILNAGLPQYG 193
+N +GQ G G S + + S + G + T+ +S+ + G G
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVST--DGRVATCGYNYRG 678
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG---YV 250
QLGHG NT SV P+ I +L + + V+C HTV G +
Sbjct: 679 QLGHG-----NTTSESV---------PKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNL 724
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YT+G YG+LGH + D +P+ V+ ++ ++ G ++ G+ + +G
Sbjct: 725 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVS----VACGQYHTMVVTASGKAFAFG 780
Query: 311 K--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
K G D M + P+ G +RC G H + + + ++G Y
Sbjct: 781 KNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRC---GYYHTIALCSGAHLFAFGRNDY 837
Query: 360 GELGYG----------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G Q+ + + +D LEG ++ +ACG H++ + D
Sbjct: 838 GQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSD 889
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 55/360 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-------H 121
H V + +G+ +T G N+ GQ G G + VS LS+ +G+ ++ H
Sbjct: 606 HTVVLTADGKVFTCGYNDNGQCGQGGTAR------VSHLSEIPKMDSGSSQAHAYNGCEH 659
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T++V+ DG G+N GQLG G+ +E P +R L +++ + + L+ +G
Sbjct: 660 TILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDG 719
Query: 182 --ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G YGQLGH ++ D + P+ + AL+ + IV VACG
Sbjct: 720 NLQNLYTFGRNDYGQLGHN-----DSIDRKI---------PQFVEALSDQQIVSVACGQY 765
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEAVISAGSVNSS 298
HT+ V + G + +G YG+LG +++ P +V +R L I G ++
Sbjct: 766 HTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLE----IRCGYYHTI 821
Query: 299 CTAGGGQLYMWGK------------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
G L+ +G+ L+ + + + +L G ++ + G
Sbjct: 822 ALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGC 881
Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H +D+ + +G +G+LG G ++ P +D G V VA G+ H++V+
Sbjct: 882 YHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP--IDDFVGKRVALVAAGFYHTVVL 939
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 35/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L +I
Sbjct: 15 VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E N L ++GW G+LG G+ + + P P+ L + ACG D
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG GT ++DS V P+ I G I VA
Sbjct: 132 AVTMEG-EVQSWGRNQNGQLGLGT-----SEDSLV---------PQKIQTFQGVPIKMVA 176
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H+VA+ G +Y WG+G YG LG ++ D W+P +V + ++ +++ G
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMV----MVACGWR 232
Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G LY +G K N +D + P+ L LS L SG H + S
Sbjct: 233 HTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 291
Query: 350 SCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ + WG ++G++G G + S P +V V+ ++CG+ H++ + ++ NV
Sbjct: 292 TGLLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVVQISCGWRHTIAVTEKENV 347
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L+ P + L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 92 WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG H+V +TE+G +GW ++G LG G +
Sbjct: 150 LGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 209
Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + ++ ACG T+ +SS+ G + G +YGQLGHG N +DS
Sbjct: 210 RWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHG-----NFEDS 262
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P+ + AL+ + I +V+ G H++A+ S G +Y WG+ +G++G + D
Sbjct: 263 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVD 313
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V V+ IS G ++ ++ WG+ N
Sbjct: 314 RCSPVQVKFPHDQKVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 355
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C H ++V G YT+G ++ GQLGHG+ P + LS I + G
Sbjct: 223 KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 282
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
H++ +T G +GWNK GQ+G G + P V+ + V +CG T+ +
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI--A 340
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E ++ + G GQLGHG + N+ L+ + P
Sbjct: 341 VTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGSSGPH 384
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + +LV P +L+ L I V+ G H +A+ G Y WG N+ GQ+G GD +
Sbjct: 257 GNFEDSLV-PQKLQALSDKLISQVSGGWR--HSMALTSTGLLYGWGWNKFGQVGVGDNVD 313
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V K+ + G HT+ VTE N ++G +GQLG G + P +
Sbjct: 314 RCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
Query: 158 CL 159
L
Sbjct: 374 AL 375
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 35/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L +I
Sbjct: 15 VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E N L ++GW G+LG G+ + + P P+ L + ACG D
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG GT ++DS V P+ I G I VA
Sbjct: 132 AVTMEG-EVQSWGRNQNGQLGLGT-----SEDSLV---------PQKIQTFQGVPIKMVA 176
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H+VA+ G +Y WG+G YG LG ++ D W+P +V + ++ +++ G
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMV----MVACGWR 232
Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G LY +G K N +D + P+ L LS L SG H + S
Sbjct: 233 HTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 291
Query: 350 SCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ + WG ++G++G G + S P +V V+ ++CG+ H++ + ++ NV
Sbjct: 292 TGLLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVVQISCGWRHTIAVTEKENV 347
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L+ P + L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 92 WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG H+V +TE+G +GW ++G LG G +
Sbjct: 150 LGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 209
Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + ++ ACG T+ +SS+ G + G +YGQLGHG N +DS
Sbjct: 210 RWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHG-----NFEDS 262
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P+ + AL+ + I +V+ G H++A+ S G +Y WG+ +G++G + D
Sbjct: 263 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVD 313
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V V+ IS G ++ ++ WG+ N
Sbjct: 314 RCSPVQVKFPHDQKVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 355
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C H ++V G YT+G ++ GQLGHG+ P + LS I + G
Sbjct: 223 KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 282
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
H++ +T G +GWNK GQ+G G + P V+ + V +CG T+ +
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI--A 340
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E ++ + G GQLGHG + N+ L+ + P
Sbjct: 341 VTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGSSGPH 384
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + +LV P +L+ L I V+ G H +A+ G Y WG N+ GQ+G GD +
Sbjct: 257 GNFEDSLV-PQKLQALSDKLISQVSGGWR--HSMALTSTGLLYGWGWNKFGQVGVGDNVD 313
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V K+ + G HT+ VTE N ++G +GQLG G + P +
Sbjct: 314 RCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
Query: 158 CL 159
L
Sbjct: 374 AL 375
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 175/361 (48%), Gaps = 49/361 (13%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R V C S H V + EG YTWGR + G+LGHGD + P +V EL I++ G
Sbjct: 35 RIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
HT VT G+ +G +G+LG G+ P V L S +V ACG+ TV L
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVL- 153
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+E + G + G GHG D E + Q P + L G++IV+++
Sbjct: 154 -LENKDVYTWGDKENGVSGHG-DTEGH------------QYLPCPVEELRGKSIVQISAC 199
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT A+ G V+T+G G +GRLGH ++++ V R VD V ++ G ++
Sbjct: 200 GFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRV----KQVACGGFHT 255
Query: 298 SCTAGGGQLYMWGKLKN----NGD----------DWMYPKPLMDLS-GWN--LRCMDSGN 340
+ G++Y WG ++ +GD + + K ++ ++ GW+ + D+G
Sbjct: 256 AAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGE 315
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
++ +WG+ +G+LG+ + + +PK VD+L+G VISVA H++ +V
Sbjct: 316 VY----------TWGNGDHGKLGHNDTAKVT--LPKPVDVLDGKRVISVASYNEHTVALV 363
Query: 401 D 401
D
Sbjct: 364 D 364
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G D + D+S Q RP I ALA IV++ACG+ HTV + +G VYTWG
Sbjct: 7 GRGEDGQLGLGDTS------DQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
G GRLGH + ++VPR V+ + N+ ++ GS +++ G LY W G
Sbjct: 61 GDDGRLGHGDNGWKFVPRLVEELRGKNIRQ----VTCGSYHTAAVTVSGDLYTWGGGMYG 116
Query: 311 KLKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
KL +G++ + P + L +R + G+ H V ++ + +WG + G G+G
Sbjct: 117 KL-GHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD- 174
Query: 368 GQKSSAMPKKVDILEGMHVISV-ACGY 393
+ +P V+ L G ++ + ACG+
Sbjct: 175 TEGHQYLPCPVEELRGKSIVQISACGF 201
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R C H AV G YTWG E GQLGHGDK+ + PT V L + + + G
Sbjct: 244 RVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCG 303
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
SHTV +T+ G +G HG+LG P PV L + V + A + TV L
Sbjct: 304 WSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVAL- 362
Query: 178 SVEGASILNAGL 189
V+ ++L A +
Sbjct: 363 -VDPVAMLRASM 373
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VY+WG G G+LG + D+ P +D ++ I+ GS ++ G++Y W
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQ----IACGSGHTVVLTEEGEVYTW 58
Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
G+L + + W + P+ + +L G N+R + G+ H V +WG YG+L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G + + P V+ L+ M V VACG H++V+++ +V
Sbjct: 119 GHG--NETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDV 159
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 1873 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 1932
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 1933 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 1992
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 1993 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 2038
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 2039 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 2098
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 2099 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 2123
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 2124 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 2166
Query: 406 GERLDQL 412
ERL L
Sbjct: 2167 SERLRPL 2173
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 795 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 854
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 855 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 914
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 915 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 967
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 968 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 1020
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 1021 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 1076
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 1077 G------LDAVFVNRVACGSSHSIAWG 1097
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 763 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 814
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 815 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 874
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 875 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVT 918
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 919 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 978
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 979 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 1034
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 1035 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 1092
Query: 396 SL 397
S+
Sbjct: 1093 SI 1094
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 729 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 786
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 787 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 844
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 845 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 890
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 891 ELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 946
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 947 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 1006
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 1007 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 1050
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 142/337 (42%), Gaps = 32/337 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 1800 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 1859
Query: 140 GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G + P+ + V +V + G L+ + G + G+L
Sbjct: 1860 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTEGEVYAWGEGEDGKL 1916
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG
Sbjct: 1917 GHGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGK 1962
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
G YGRLGH + +D+ P+ V+ + + +G + C ++ W G
Sbjct: 1963 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 2020
Query: 311 KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
KL G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 2021 KLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 2080
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 2081 HVRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 2115
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 15/264 (5%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC---YTWGRNERGQLGHGDKIQRDRPTI 103
P +R L +R V+ C H V +G YT+GRN+ GQLGH D I R P
Sbjct: 502 PKIIRSLENKIVRLVS--CSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQF 559
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVS 161
V LS +I G+ HT+VVT G + AFG N +GQLG ++ N++ P VR
Sbjct: 560 VEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQ 619
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E CG T+ L S GA + G YGQLG G N +T S+++L + R
Sbjct: 620 ECLEIRCGYYHTIALCS--GAHLFAFGRNDYGQLGLGRSNASST--SNLQLQQQRFSNAR 675
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I L G+ IV++ACG HT+AV G +Y +G +G+LG + + P +D F
Sbjct: 676 LIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGK 735
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQ 305
+ A+++AG ++ GG +
Sbjct: 736 RI----ALVAAGFYHTVVLTGGKE 755
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
E ++ G+N G+LGHGD R + L + +I + GAG HTVV+T DG G
Sbjct: 372 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC--GADFTVWLSSVEGASILNAGLPQYG 193
+N +GQ G G S + + S + G + T+ +S+ + G G
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVST--DGRVATCGYNYRG 489
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG---YV 250
QLGHG NT SV P+ I +L + + V+C HTV G +
Sbjct: 490 QLGHG-----NTTSESV---------PKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNL 535
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YT+G YG+LGH + D +P+ V+ ++ ++ G ++ G+ + +G
Sbjct: 536 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVS----VACGQYHTMVVTVSGKAFAFG 591
Query: 311 K--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
K G D M + P+ G +RC G H + + + ++G Y
Sbjct: 592 KNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRC---GYYHTIALCSGAHLFAFGRNDY 648
Query: 360 GELGYG----------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G Q+ + + +D LEG ++ +ACG H++ + D
Sbjct: 649 GQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSD 700
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 157/360 (43%), Gaps = 55/360 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-------H 121
H V + +G+ +T G N+ GQ G G + VS LS+ +G+ ++ H
Sbjct: 417 HTVVLTADGKVFTCGYNDNGQCGQGGTAR------VSHLSEIPKMDSGSSQAHAYNGCEH 470
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T++V+ DG G+N GQLG G+ +E P +R L +++ + + L+ +G
Sbjct: 471 TILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDG 530
Query: 182 --ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G YGQLGH ++ D + P+ + AL+ + IV VACG
Sbjct: 531 NLQNLYTFGRNDYGQLGHN-----DSIDRKI---------PQFVEALSDQQIVSVACGQY 576
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEAVISAGSVNSS 298
HT+ V G + +G YG+LG +++ P +V +R L I G ++
Sbjct: 577 HTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLE----IRCGYYHTI 632
Query: 299 CTAGGGQLYMWGK------------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
G L+ +G+ L+ + + + +L G ++ + G
Sbjct: 633 ALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGC 692
Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H +D+ + +G +G+LG G ++ P +D G + VA G+ H++V+
Sbjct: 693 YHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP--IDDFVGKRIALVAAGFYHTVVL 750
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4121 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4180
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4181 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4240
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4241 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4286
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4287 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4346
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4347 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4371
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4372 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4414
Query: 406 GERLDQL 412
ERL L
Sbjct: 4415 SERLRPL 4421
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3046 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3105
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3106 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKP 3165
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3166 KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3218
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3219 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3271
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3272 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3327
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 3328 G------LDAVFVNRVACGSSHSIAWG 3348
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 3014 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3065
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3066 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3125
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3126 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------VTQLKPKLVV 3169
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3170 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3229
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3230 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3285
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3286 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3343
Query: 396 SL 397
S+
Sbjct: 3344 SI 3345
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 2980 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3037
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 3038 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3095
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 3096 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3141
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 3142 ELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQ----VACGSRDAQTLALTEDGAV 3197
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3258 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3301
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4048 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4107
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4108 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4165
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG G
Sbjct: 4166 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4211
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4212 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4269
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4270 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4329
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4330 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4363
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 616 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 675
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 676 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 735
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 736 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 779
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
++A+ S+G +Y+WG LGH R + VPR V Q ++ ++
Sbjct: 780 FSLALSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 833
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 834 HCLALSSSGEVFGWGR 849
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 39/266 (14%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-KY 110
P + + C + + EG+ YTW +L + P + E++ +
Sbjct: 563 PTLSCRFQIKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHEV 612
Query: 111 KIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATA 167
I AG GR H + + + N+ ++G + +LG G P+ + L V +
Sbjct: 613 FISIAGHCEGR-HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY 671
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG ++ ++ G ++L G Y +LGHG N+ D S+ P + AL+
Sbjct: 672 CGCSYSAAITC--GGNLLTWGRGTYARLGHG-----NSDDRSL---------PTLVVALS 715
Query: 228 GETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+V VA G+ H++A+ S+G V+ WG G YG+LG+ P V+ LP
Sbjct: 716 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE------SLP 769
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
+ AGS S + GQLY WGK
Sbjct: 770 RVQRVFAGSQFSLALSSEGQLYSWGK 795
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A E + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 599 EAEPLP--MEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 656
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P ++
Sbjct: 657 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 712
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 713 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 754
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4185 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4244
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4290
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4350
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4351 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4375
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4376 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4418
Query: 406 GERLDQL 412
ERL L
Sbjct: 4419 SERLRPL 4425
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3108
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3109 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 3168
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3169 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3221
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3222 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3275 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 3331 G------LDAVFVNRVACGSSHSIAWG 3351
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 3017 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3129 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------TTQLKPKLVT 3172
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3173 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3233 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3288
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3289 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3346
Query: 396 SL 397
S+
Sbjct: 3347 SI 3348
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 2983 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3040
Query: 132 LAFGWNKHGQLGSGSIRNEIEPS--PV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P PV R V + A G + L +++G + + G
Sbjct: 3041 YACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3098
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 3099 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3144
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 3200
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3201 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3260
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3261 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4052 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4111
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4112 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4169
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG G
Sbjct: 4170 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4273
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4274 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4333
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4334 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4367
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 678
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 739 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 782
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+VA+ S+G +YTWG LGH R + VPR V Q ++ ++
Sbjct: 783 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 836
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 837 HCLALSSSGEVFGWGR 852
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A + + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 602 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P ++
Sbjct: 660 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 715
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4222 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4281
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4282 LNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4341
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4342 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4387
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4388 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4447
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4448 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4472
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4473 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4515
Query: 406 GERLDQL 412
ERL L
Sbjct: 4516 SERLRPL 4522
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3090 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3149
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3150 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3209
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G
Sbjct: 3210 KQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-------------- 3255
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
E P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3256 GSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3315
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3316 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3371
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 3372 G------LDAVFVNRVACGSSHSIAWG 3392
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ ++ G S V+ D G+ + G G+LG G P + L
Sbjct: 3058 SRLRPI------HISGGSKSLFIVSQD--GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 3109
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3110 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3169
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3170 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DNA-------------TQLKPKQVT 3213
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3214 ALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3273
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3274 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3329
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3330 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3387
Query: 396 SL 397
S+
Sbjct: 3388 SI 3389
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 71 VAVDVEGRC--YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
VA + E C WG N++ QLG G K++ PT +S+ + G +V+
Sbjct: 3019 VAAEQELPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHISGGSKSLFIVS 3076
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGAS 183
+DG A G +G+LG G N P + L V + A G + L +++G
Sbjct: 3077 QDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-K 3134
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ + G + G+LGHG + +PR + AL + I VACG++H+ A
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAA 3180
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA-- 301
+ S+G +YTWG G YGRLGH + + P++V V+ ++ GS ++ A
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQ----VACGSRDAQTLALT 3236
Query: 302 GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SW 354
G ++ W GKL G + P + LSG + ++ G + + +W
Sbjct: 3237 EDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3296
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G Y LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3297 GKGDYYRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3345
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 144/332 (43%), Gaps = 30/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4149 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4208
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4209 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4266
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ S G+V TWG G
Sbjct: 4267 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKG 4312
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4313 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4370
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4371 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4430
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4431 VRR--PKKVAALQGKKIISIATGSLHCVACSD 4460
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L I +A C H +A+D Y+WG E +LGHGD R PT +
Sbjct: 602 LEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKI 661
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
S L + +K G S++ +T GN +G +G+LG G+ ++ P+ V L E+
Sbjct: 662 SALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEI 720
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A G+ L + G YG+LG+G N S + E PR
Sbjct: 721 IDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNG-----NCNSSLQPILVETLPR---- 771
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW----VPRRVDVFQ 279
+ ++ G ++A+ ++G++Y+WG LGH++ + VPR V Q
Sbjct: 772 -------VQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRLVSSLQ 822
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++ ++ G + G+++ WG+
Sbjct: 823 HKRLVD----VAVGVAHCLALTSCGEVFGWGR 850
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-- 115
++ V GC + A+ G YTWGR G+LGHG+ + P IV L++Y+I
Sbjct: 668 VKAVFCGC--SYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVAL 725
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G+G +H++ +T +G A+G +G+LG+G+ + ++P V L V GA ++
Sbjct: 726 GSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETL-PRVQRIFAGAQSSMA 784
Query: 176 LSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L++ EG L +G+ LGH E + + SV PR +++L + +V
Sbjct: 785 LTT-EG------HLYSWGKASCLGH-QQVERSVQGCSV---------PRLVSSLQHKRLV 827
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
VA G H +A+ S G V+ WG R + P V + R +L +
Sbjct: 828 DVAVGVAHCLALTSCGEVFGWG---------RNDSQQICPSSVSCEPLLRLPILVGLPTL 878
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
A + +CTA Q +W + G P ++DL R +D
Sbjct: 879 PASGI--ACTA--SQSLIWTQSSQQGLPLRAPF-VIDLGEPTFRLLD 920
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 148 RNEIEPSPVRCLVSEVTATA---CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+ E+EP P+ L E + C + + S A AG + +LGHG +
Sbjct: 599 KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAG--EDHRLGHGDTH--- 653
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
A+ P I+AL + V CG +++ A+ G +YTWG G YGRLGH
Sbjct: 654 -----------ARAVPTKISAL-DRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHG 701
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
D+ VP V ++ + + +G +S C G +Y W GKL N +
Sbjct: 702 NSDDQCVPAIVMALAEYEII--DVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNS 759
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQ--KSSAMPKK 377
L++ R + + SWG A LG+ + + ++P+
Sbjct: 760 SLQPILVETLPRVQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRL 817
Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGE 407
V L+ ++ VA G H L + T+ GE
Sbjct: 818 VSSLQHKRLVDVAVGVAHCLAL---TSCGE 844
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4300 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEH 4359
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L + G +H+ +T G L +G ++G+LG G +++ P V L+
Sbjct: 4360 LHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4419
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4420 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4465
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4466 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4525
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4526 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4550
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4551 --------------GQLGDGTV--TAIQRPRLVSALQGKHIVKVTCGSAHTLAL-STSQL 4593
Query: 406 GERLDQL 412
ERL L
Sbjct: 4594 SERLRPL 4600
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3137 GRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3196
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3197 NRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3256
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3257 KLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3309
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3310 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3362
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3363 QPIGGLRGRRVIH----VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3418
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D ++ S I+WG
Sbjct: 3419 G------LDDVFVNRVACGSSHSIAWG 3439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ EGR + G G+LG G P + L
Sbjct: 3105 SRLRPI------HIAGGSKSLFIVSQ--EGRVFACGEGTNGRLGLGVTYNVPLPHQLPVL 3156
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3157 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIR 3216
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +A
Sbjct: 3217 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVA 3260
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3261 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3320
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3321 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3376
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H DS + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3377 AVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFVNRVACGSSH 3434
Query: 396 SL 397
S+
Sbjct: 3435 SI 3436
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V+++G
Sbjct: 3071 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQEGRV 3128
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 3129 FACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3186
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 3187 EGEDGKLGHGNRTTLD--------------KPRQVEALRAKKIRDVACGSSHSAAISSQG 3232
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 3233 ELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQ----VACGSRDAQTLALTEDGAV 3288
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3289 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 3348
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3349 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQV 3392
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN VS P + L G+ + +A G S H A+ G+ TWG+ G+LGHGD +
Sbjct: 4346 GNRVSYDRPKLVEHLHGMSVADIACG--SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQ 4403
Query: 99 DRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP +V L Y+ G+G + T+ +T+D N ++G +G+LG G P +
Sbjct: 4404 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4463
Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L V CG+ F+V L+ + ++ G + +LGHG+ +
Sbjct: 4464 ESLAGLGVIKVECGSQFSVALT--KSGAVYTWGKGDFHRLGHGSVDHVR----------- 4510
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP+ +AAL G+ I+ +A G+ H VA G VYTWG G+LG PR V
Sbjct: 4511 ---RPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4567
Query: 276 DVFQRNNVL 284
Q +++
Sbjct: 4568 SALQGKHIV 4576
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 144/336 (42%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4227 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4286
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4287 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4344
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ + G V TWG G
Sbjct: 4345 HGNRVSYD--------------RPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKG 4390
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4391 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4448
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4449 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4508
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4509 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4542
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G +
Sbjct: 634 IAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCT 693
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ V+T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALT 753
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + ++ G+
Sbjct: 754 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRIFAGSQ 797
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
++VA+ S+G VYTWG LGH R + VPR V Q ++ ++ G
Sbjct: 798 YSVALSSEGQVYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----MAVGVA 851
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 852 HCLALSSSGEVFGWGR 867
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P+P + ET + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 617 EAEPQP--LEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP 674
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P +
Sbjct: 675 TKIAALEQHCV----QSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVA 730
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
L+ + + SG+ H + ++ +WG YG+LG G
Sbjct: 731 ALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 772
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L + VA G H +A+ EG + WG + G+LG+G+ +P +V
Sbjct: 726 PTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES 785
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L ++++ AG ++V ++ +G + W K LG + ++ V LVS +
Sbjct: 786 LP--RVQRIFAGSQYSVALSSEGQ--VYTWGKATCLGHQLVERSVQGCSVPRLVSSL 838
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 173/357 (48%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ F++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 10 VLFISAG--ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT + + ++GW G+LG G+ + + P P++ L ++ ACG D
Sbjct: 68 GADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACG-DSHCL 126
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG GT T+DS V P+ I A G +I VA
Sbjct: 127 AVTMEG-EVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFEGISIKMVA 171
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G ++ WG+G YG LG ++ D VP++V + ++ +++ G
Sbjct: 172 AGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMV----MVACGWR 227
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L L G N+ + G H + D
Sbjct: 228 HTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 287
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G S P ++ + VI ++CG+ H+L + D+ NV
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCS--PIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 342
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L++P ++ L G+ IR +A C HC+AV +EG +WGRN+ GQ
Sbjct: 87 WGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 144
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG HT VTEDG +GW ++G LG G +
Sbjct: 145 LGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRND 204
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + + + ACG T+ +SS+ G + G +YGQLGHG
Sbjct: 205 RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHGD--------- 253
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E + P + AL G+ I +++ G HT+A+ + G +Y WG+ +G++G + D
Sbjct: 254 -----FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNID 308
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P ++ Q V+ IS G ++ ++ WG+ N
Sbjct: 309 HCSPIQIKFPQDQKVIQ----ISCGWRHTLAVTDKQNVFSWGRGTN 350
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 28/293 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG + G+LGHGD P + L+ I K G +HT+ VT+ G +FG N++
Sbjct: 89 YSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQN 148
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG G+ + I P PV L EVT+ ACG + + L++ + G +YG LG G
Sbjct: 149 GQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS--LAATSAGDVFAWGWGRYGNLGVG 206
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E + P + L G + VACG H++A D G VYT+G+ Y
Sbjct: 207 PP--------------EDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKY 252
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
G+LGH + D+ VP+ V+ + + ++ +I+ G ++S G+LY WG K
Sbjct: 253 GQLGHGDCIDQLVPKAVESLKDSRIV----LIAGGWRHTSAADDSGKLYSWGWNKFGQLG 308
Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGY 364
+ D P P+ L+ ++ + G H F ++ SWG G+LG+
Sbjct: 309 IGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGH 361
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 167/359 (46%), Gaps = 33/359 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+R + C S H +A+ G +WGR E GQLGHGD +R +P + L +
Sbjct: 13 DLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVC 72
Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
+G ++V +++ N + ++GW G+LG G + P P+R L + ACG T
Sbjct: 73 SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHT- 131
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + + + G Q GQLG GT T D+ + P+ + +L G+ + +
Sbjct: 132 -LAVTDTGELFSFGRNQNGQLGLGT-----TSDAIL---------PQPVESLRGQEVTSI 176
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG H++A S G V+ WG+G YG LG +D +P +V + V ++ G
Sbjct: 177 ACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKV----TSVACGW 232
Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+S G +Y +G K +GD D + PK + L + + +G H AD
Sbjct: 233 RHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRI-VLIAGGWRHTSAAD 291
Query: 349 SS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S SWG ++G+LG G S P V L V ++CG+ H+ + + +V
Sbjct: 292 DSGKLYSWGWNKFGQLGIG--SNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDV 348
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 130/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ P +R L G +I VA C H +AV G +++GRN+ GQ
Sbjct: 93 WGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA--CGDTHTLAVTDTGELFSFGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P V L ++ G H++ T G+ A+GW ++G LG G +
Sbjct: 151 LGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPED 210
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
PS V L +VT+ ACG ++ ++ E ++ G +YGQLGHG + D
Sbjct: 211 RHLPSQVHGLEGVKVTSVACGWRHSI--AADETGAVYTFGWSKYGQLGHG-----DCIDQ 263
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P+A+ +L IV +A G HT A D G +Y+WG+ +G+LG D
Sbjct: 264 LV---------PKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTD 314
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P V + P ++S G ++ G ++ WG+ N
Sbjct: 315 SNAPVPVQGLNTS----PVKLLSCGWRHTFAVTEAGDVFSWGRGVN 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
T S +S ++ G SH++ + +G +L++G + GQLG G +P + L+
Sbjct: 6 TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQ 65
Query: 162 EVTATAC-GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ C GA+++V LS + + G +G+LGHG N+ P
Sbjct: 66 ASCSAVCSGAEYSVALSQPRN-EVYSWGWGDFGRLGHGDCNDVFI--------------P 110
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ I ALAG IVKVACG HT+AV G ++++G G+LG D +P+ V+ +
Sbjct: 111 QPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRG 170
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLR 334
V I+ G +S G ++ WG+ N G +D P + L G +
Sbjct: 171 QEV----TSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVT 226
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H ++ + ++G ++YG+LG+G + +PK V+ L+ ++ +A G+
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQ--LVPKAVESLKDSRIVLIAGGW 284
Query: 394 GHS 396
H+
Sbjct: 285 RHT 287
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 152 EPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
E + R VS+ VT+ +CG+ + L+ + L+ G + GQLGHG E
Sbjct: 3 EATTFRSAVSDLRVTSVSCGSSHS--LALLSNGIALSWGRGEDGQLGHGDAEE------- 53
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS-KGYVYTWGFGGYGRLGHREQKD 268
+ +PRAI L + V G ++VA+ + VY+WG+G +GRLGH + D
Sbjct: 54 -------RKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCND 106
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYP 322
++P+ + N++ ++ G ++ G+L+ +G+ +N D + P
Sbjct: 107 VFIPQPIRALAGRNIVK----VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILP 162
Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+P+ L G + + G H + +WG +YG LG GP + +P +V L
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGP--PEDRHLPSQVHGL 220
Query: 382 EGMHVISVACGYGHSL 397
EG+ V SVACG+ HS+
Sbjct: 221 EGVKVTSVACGWRHSI 236
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P+++ L GV + VA G H +A D G YT+G ++ GQLGHGD I + P V
Sbjct: 214 PSQVHGLEGVKVTSVACGWR--HSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVES 271
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTA 165
L +I G HT + G ++GWNK GQLG GS + P PV+ L S V
Sbjct: 272 LKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKL 331
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+CG T + E + + G GQLGH NE ++ V+LA
Sbjct: 332 LSCGWRHT--FAVTEAGDVFSWGRGVNGQLGH---NEPKDTNAPVRLA 374
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+A++ + V+CG++H++A+ S G +WG G G+LGH + ++ PR + + +
Sbjct: 9 SAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASC 68
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMD 337
AV S + + + ++Y W G+L + + +D P+P+ L+G N+ +
Sbjct: 69 ---SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA 125
Query: 338 SGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+ H D+ S+G Q G+LG G + +P+ V+ L G V S+ACG HS
Sbjct: 126 CGDTHTLAVTDTGELFSFGRNQNGQLGLGT--TSDAILPQPVESLRGQEVTSIACGGEHS 183
Query: 397 LVIVDRTNV 405
L +V
Sbjct: 184 LAATSAGDV 192
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 67/358 (18%)
Query: 43 NLVSPTRLRPLV--GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
N+ +PT L L G+ ++ +A HC+AV +G Y WG E G+LG G + +
Sbjct: 3906 NVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNV 3965
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L + AG G SH+ +T+DG+ +G ++G+LG + +P V L
Sbjct: 3966 PHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALK 4025
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
E VT ACG+ L + + + G YG+LG G + E
Sbjct: 4026 GEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGN--------------EGSKV 4071
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ I +L G+ ++K+ CG+ ++A+ + G+VYTWG G Y RLGH + + PRRV
Sbjct: 4072 PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRV---- 4127
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+L E VI G + C C +SG
Sbjct: 4128 -LGLLAHENVIDIGCGSLHCIV---------------------------------CTESG 4153
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+ SWG G++G ++ ++PK+++I + + + VACG HS+
Sbjct: 4154 KV----------FSWGDNDEGQIGND--TTQAVSVPKRINITDNICIDHVACGSAHSI 4199
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 24/272 (8%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
N+ P ++ L +R VA C H +AV +G+ ++WG + GQLGHG DRP
Sbjct: 2996 ANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRP 3055
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
++ I++ G H+ V+ +G +G G+LG G N+ +P VR L
Sbjct: 3056 KMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEK 3115
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLAYEAQP 218
++ ACG+ A L AG G G+ + KD SS + +
Sbjct: 3116 VRISCVACGS---------RNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVIT 3166
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I+++ CG + +V + +G VYTWG G Y RLG+ + +P VD
Sbjct: 3167 FP--------SNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGL 3218
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ G+++ G++Y WG
Sbjct: 3219 ASKTI----TQVAVGALHCLALTSSGEVYSWG 3246
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 145/344 (42%), Gaps = 39/344 (11%)
Query: 71 VAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGAGRSHTVVVTED 128
++ D G + + WG N+ QLG + + I S L++ + G + VV++D
Sbjct: 2917 LSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDD 2976
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASIL 185
G A G G+LG G N P + L V A +C L+ +
Sbjct: 2977 GKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHV--LAVTADGKVF 3034
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G QYGQLGHG+ Y+ RP+ I + I +V+CGT H+ AV
Sbjct: 3035 SWGDGQYGQLGHGSLQSYD--------------RPKMIEIFQAKHIREVSCGTGHSAAVS 3080
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS-SCTAGGG 304
G ++TWG G GRLGH + ++ P+ V ++ + + ++ GS N+ + AG
Sbjct: 3081 VNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRI----SCVACGSRNAHTLAAGDN 3136
Query: 305 QLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWG 355
L+ WG LK+ P ++ N+ ++ G MH + + +WG
Sbjct: 3137 SLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECG-MHFSVLLTKEGKVYTWG 3194
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+Y LG +P VD L + VA G H L +
Sbjct: 3195 KGEYYRLGND--STSVQPIPTLVDGLASKTITQVAVGALHCLAL 3236
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 156/365 (42%), Gaps = 47/365 (12%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
RL P I+F AG C V D +G+ + G G+LG G P +S LS
Sbjct: 2957 RLHP-----IQF--AGGSKCSFVVSD-DGKVFACGEGSSGRLGIGGFANIRMPHQISSLS 3008
Query: 109 KYKIKKAG---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
Y ++K AGR H + VT DG ++G ++GQLG GS+++ P + +
Sbjct: 3009 MYVVRKVAVSCAGR-HVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIR 3067
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+CG + +S V G + G G+LGHG N Q +P+ +
Sbjct: 3068 EVSCGTGHSAAVS-VNG-ELFTWGQGADGRLGHGDSNN--------------QTKPKLVR 3111
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRN 281
AL I VACG+ HT+A ++ WG G +G+LG ++ VP +V F N
Sbjct: 3112 ALEKVRISCVACGSRNAHTLAAGDNS-LWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSN 3170
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMD-LSGWNLRC 335
+ I G S G++Y WGK L N+ L+D L+ +
Sbjct: 3171 II-----QIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQ 3225
Query: 336 MDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G +H S SWG ++G+ G + P+ V L+G + +ACG
Sbjct: 3226 VAVGALHCLALTSSGEVYSWGDNEHGQQGNN--STICNRKPQIVASLKGHRICKIACGSS 3283
Query: 395 HSLVI 399
HS+
Sbjct: 3284 HSIAF 3288
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 27/265 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G+ Y+WG+ G LG G+ + PT V+ LS +I AG H+ VTED
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG G+ +++ P+ V L ++ CG+ L+ + + +
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSW 638
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDS 246
G YG+LG ++ P+ I+ + + +VK+ CG ++A+
Sbjct: 639 GDGDYGKLGRPGSDQNKV--------------PKPISGIGSTSPVVKIICGNQISMALTK 684
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G +Y+WG G +LGH Q+ P+ ++ V + +S G+ + +
Sbjct: 685 DGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVV----SDVSVGAQHCVALTTDSDV 740
Query: 307 YMWGK-----LKNNGDDWMYPKPLM 326
Y WGK + +GD + PLM
Sbjct: 741 YAWGKNSSFEVNESGD--IISSPLM 763
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT + L G I ++AG S H AV +G YTWG+ G+LGHG+ + PTIV
Sbjct: 550 APTAVAALSGDRIVHISAG--SMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVE 607
Query: 106 ELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCL--V 160
L+ KI + G+G +HT+ + + G ++G +G+LG GS +N++ P P+ +
Sbjct: 608 GLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKV-PKPISGIGST 666
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
S V CG ++ L+ + + + G QLGHG N+ + + +P
Sbjct: 667 SPVVKIICGNQISMALT--KDGKLYSWGCGDTYQLGHG--NQEHVR------------QP 710
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ I L+ + V+ G H VA+ + VY WG
Sbjct: 711 KLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E+Q P A+AAL+G+ IV ++ G+ H+ AV G +YTWG G YGRLGH +D+ +P
Sbjct: 546 ESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTI 605
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDL 328
V+ N V + +G ++ GQ++ W GKL G D PKP+ +
Sbjct: 606 VEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGI 663
Query: 329 SGWN--LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ ++ + + + D SWG +LG+G Q+ PK ++ L V
Sbjct: 664 GSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHG--NQEHVRQPKLIEGLSETVV 721
Query: 387 ISVACGYGHSLVIVDRTNV 405
V+ G H + + ++V
Sbjct: 722 SDVSVGAQHCVALTTDSDV 740
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
NH +A+ G VY+WG G G LG + + P V + ++ ISAGS++S+
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVH----ISAGSMHSA 573
Query: 299 CTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSS 350
G LY WGK N +D + P + L+G + +D SG+ H D+
Sbjct: 574 AVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 351 CI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVI 399
+ SWG YG+LG G + +PK + I V+ + CG S+ +
Sbjct: 634 QVWSWGDGDYGKLGRP--GSDQNKVPKPISGIGSTSPVVKIICGNQISMAL 682
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L I VA G + HC+A+ G Y+WG NE GQ G+ I +P IV+
Sbjct: 3212 PTLVDGLASKTITQVAVGAL--HCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVAS 3269
Query: 107 LSKYKIKKAGAGRSHTVVVTE 127
L ++I K G SH++ +
Sbjct: 3270 LKGHRICKIACGSSHSIAFAQ 3290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 54 VGVDIRFVAAGCVSCHC-----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
V V + + + C V + EG+ YTWG+ E +LG+ + PT+V L+
Sbjct: 3160 VPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLA 3219
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
I + G H + +T G ++G N+HGQ G+ S +P V L + A
Sbjct: 3220 SKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIA 3279
Query: 168 CGADFTVWLSS--------VEGASILNAGLPQYGQLGHG--TDNEYNTKD 207
CG+ ++ + S N+ P + HG +D+ TKD
Sbjct: 3280 CGSSHSIAFAQGSLTTAVKFSPISFSNSKDPLGASIVHGKSSDDAKETKD 3329
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 76/201 (37%), Gaps = 14/201 (6%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G + VA G + G ++WG + G+LG G P +
Sbjct: 4018 PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDS 4077
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + K G ++ +T G+ +G + +LG G ++ P V L++
Sbjct: 4078 LTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVI 4137
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
G + E + + G GQ+G+ T +A P+ I
Sbjct: 4138 DIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTT--------------QAVSVPKRINIT 4183
Query: 227 AGETIVKVACGTNHTVAVDSK 247
I VACG+ H++A SK
Sbjct: 4184 DNICIDHVACGSAHSIAWSSK 4204
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D + +P R+ L+ + + GC S HC+ G+ ++WG N+ GQ+G+
Sbjct: 4118 DSHQRTPRRVLGLLAHE-NVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSV 4176
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P ++ I G +H++
Sbjct: 4177 PKRINITDNICIDHVACGSAHSI 4199
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 158/355 (44%), Gaps = 53/355 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3832 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3891
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 3892 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + + G YG+LG G + T P I
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKT--------------PMKID 3997
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G ++KV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3998 SLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4057
Query: 285 PPEAVISAGSVNSSCTAGGGQL--YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
I+ GS++ C G++ + WG L W+L G ++
Sbjct: 4058 ----AIATGSLHCVCCTEDGRIKVFQWG-----------------LPRWSLGL---GEVY 4093
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+WG G+LG G + P+ V L+G + VACG H+L
Sbjct: 4094 ----------TWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4136
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L ++ VA H +A+ V+G+
Sbjct: 2782 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 2839
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G ++G ++
Sbjct: 2840 FSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEY 2899
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++ P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 2900 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 2960 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3005
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3006 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3053
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 172/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2741 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRL 2795
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 2796 GLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 2855
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 2856 MNCDKPRLIEALKAKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNT---- 2908
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q RP+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2909 ---------TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2960 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3015
Query: 321 YPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP M L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3016 VRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3073
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3074 VQGLEGQKITRVACGSSHSV 3093
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 3817 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3874
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 3875 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 3920
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD Q + V+ + +G + C ++ W
Sbjct: 3921 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 3978
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4037
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4038 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4065
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 35/299 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK----IKKAGAGRSHTVV 124
H +A+ G ++WG + G+LGHGD + PT+++ + + + G +++
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAA 528
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS 183
+T DG +G +G+LG GS ++ P V L +V ACG+ L+ E
Sbjct: 529 ITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQ 588
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ + G YG+LG G + T P+ + L IVKV CG+ +VA
Sbjct: 589 VWSWGDGDYGKLGRGGSDGCKT--------------PKLVEKLQDLDIVKVCCGSQFSVA 634
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G VYTWG G RLGH + P+ +D Q V+ ++ GS +
Sbjct: 635 LTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD----VAVGSTHCLALTDD 690
Query: 304 GQLYMWG---KLKNNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
G+++ WG KL++ D ++ PK L L+ ++ + G F A SSC W
Sbjct: 691 GEVHSWGSNDKLQHF--DTLFSNKKQPKALPGLNSKHIVGISCGPGQSF--AWSSCSEW 745
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2728 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2785
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG SG+I + + + V + A G + L +V+G + + G
Sbjct: 2786 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 2843
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 2844 EGDDGKLGHFSRMNCD--------------KPRLIEALKAKRIRDIACGSSHSAAITSSG 2889
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 2890 ELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 2945
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 2946 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3005
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3006 FRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3049
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 171/410 (41%), Gaps = 61/410 (14%)
Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P ++ LS K+ K A H + ++ +G ++G G+LG G EP+ +
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAA 506
Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V ACG+ ++ ++ V+G + G YG+LGHG+
Sbjct: 507 FNGKQAGKHVVHIACGSTYSAAIT-VDG-ELYTWGRGNYGRLGHGSS------------- 551
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
E Q P + AL G +V VACG+ T+AV G V++WG G YG+LG
Sbjct: 552 -EDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 610
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPL 325
P+ V+ Q +++ + GS S GQ+Y WGK L + D+ + +PK L
Sbjct: 611 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLL 666
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + G+ H D + SWG + + K PK + L
Sbjct: 667 DTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQ--PKALPGLNSK 724
Query: 385 HVISVACGYGHSL---------------VIVDRTNVGERLDQLDVYDGKASSQDNEEIDR 429
H++ ++CG G S +VD + +QLD+ Q +E +D
Sbjct: 725 HIVGISCGPGQSFAWSSCSEWSVGLRVPFVVDVCPM--TFEQLDLL----LRQVSEGMDG 778
Query: 430 NSTVPP--KKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDSEEQAN 477
+S PP +K V+ + R + E ++E + E D+ E A+
Sbjct: 779 SSDWPPPQEKECMVVATLNLLRLQGNPQDIEAKKEAQKEKEIDEQEANAS 828
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3755 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG-KLYA 3813
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 3814 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL 3859
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ I+AG +S+C G
Sbjct: 3860 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD----IAAGGAHSACITASG 3915
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
+L+ WGK + + +D + PK + L G R +D SG+ D + S
Sbjct: 3916 ELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGH--RVIDVACGSGDAQTLCLTDDDMVWS 3973
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG YG+LG G G P K+D L G+ VI V CG S+ +
Sbjct: 3974 WGDGDYGKLGRG--GSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 62/255 (24%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G +TWG+ G+LGHGD + +P +V
Sbjct: 3887 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 3944
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 3945 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGV 4004
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4005 IKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4062
Query: 205 -------TKDSSVKLAYEAQPR-----------------------------PRAIAALAG 228
T+D +K+ PR PR +AAL G
Sbjct: 4063 SLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4122
Query: 229 ETIVKVACGTNHTVA 243
+ I +VACG+ HT++
Sbjct: 4123 KKINRVACGSAHTLS 4137
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + RP +V
Sbjct: 2861 PRLIEALKAKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKV 2918
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2919 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2978
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 2979 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVG 3036
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3037 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE M+ GK+ G ++ CGST A+ GR + +P
Sbjct: 498 LEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTP 557
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P +V +L
Sbjct: 558 MLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 617
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
I K G +V +T+DG +G + +LG G+ + VR
Sbjct: 618 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH------VR---------- 661
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL-----AYEAQPRPRA 222
F L +++G +++ + L D E ++ S+ KL + + +P+A
Sbjct: 662 ----FPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQPKA 717
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV ++CG + A
Sbjct: 718 LPGLNSKHIVGISCGPGQSFA 738
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3013 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3070
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3071 PTLVQGLEGQKITRVACGSSHSVAWT 3096
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-----------------CYTWG 83
D ++ P +++ L G + +A G S HCV +GR YTWG
Sbjct: 4039 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWG 4096
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
N+ GQLG G RP +V+ L KI + G +HT+
Sbjct: 4097 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136
>gi|427795675|gb|JAA63289.1| Putative protein rcc2, partial [Rhipicephalus pulchellus]
Length = 388
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 125/246 (50%), Gaps = 28/246 (11%)
Query: 19 GGELLFCGSTCWDAVGRRK-------GALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHC 70
G LLF G T WD +GRR + + NL P RL P ++ V +GC +CH
Sbjct: 137 AGTLLFSGGTNWDTIGRRPKDKQKAGASQERNLWGPHRLAWPH---RVKAVFSGCSACHT 193
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
V + +G+ +TWGRN++GQLG D +RD PT+V L + A GR+HT+ +T+ G+
Sbjct: 194 VLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLTDHGS 253
Query: 131 SLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
A G NK GQ G GS + P+ V + +CG +F+V L G + G
Sbjct: 254 VFACGDNKMGQCGVGSQNASVHVPTRVAFKLRPAVRVSCGGEFSV-LVDCRG-HVYTFGC 311
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH TD Y +S KL ++ + PR + IV+VA G
Sbjct: 312 PEYGQLGHNTDGRYFV--TSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVEVASG 369
Query: 238 TNHTVA 243
NHTV+
Sbjct: 370 LNHTVS 375
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
+ K +G HTV++TE G + +G N GQLG ++ P+ V L S V A A
Sbjct: 180 RVKAVFSGCSACHTVLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAA 239
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG T++L+ + S+ G + GQ G G+ N + ++A++ +P
Sbjct: 240 CGRAHTLFLT--DHGSVFACGDNKMGQCGVGSQNA--SVHVPTRVAFKLRP--------- 286
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR------------EQKDEWVPRRV 275
V+V+CG +V VD +G+VYT+G YG+LGH + K E VPRRV
Sbjct: 287 ---AVRVSCGGEFSVLVDCRGHVYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVPRRV 343
Query: 276 DVFQRNN 282
VF N
Sbjct: 344 QVFIDRN 350
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIPIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVS--YSGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 76 ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ P +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG----IPIKM 176
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKM----SMVACGWR 234
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSAGGEKMSMVACGWRHTISVS--YSGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
T++ ++ G +H+VA+ S V +WG G G+LGH + +D P ++ + ++ +V
Sbjct: 16 TVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV---SV 72
Query: 290 ISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
+ + G ++Y W G+L + N D P P+ L G ++ + G+ H
Sbjct: 73 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHC 132
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V + SWG Q G+LG G + S +P+K+ EG+ + VA G H+ + +
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 189
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVS--YSGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 76 ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 176
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 33/351 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ TWGR E GQLGHGD R PT++S I
Sbjct: 16 VVLVSAG--ASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVIC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +ED + + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHC-- 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ +L+ G Q GQLG GT T+DS + P+ I A G ++ +A
Sbjct: 132 LAVTMAGEVLSWGRNQNGQLGLGT-----TEDSLL---------PQTIQAFEGISVKMIA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +VP +V + + ++ +++ G
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV----LVACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P + L + + G H + +D
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG ++G++G G S P +V+ E V VACG+ H+L
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCS--PAQVNFPEEQKVAQVACGWRHTLAF 342
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA--CGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + + + ACG T+ +SS S+ G +YGQLGHG
Sbjct: 211 RFVPEKVSSVEGDKMVLVACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 259
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL + +++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 260 -----FEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314
Query: 269 EWVPRRVDVFQRNNV 283
P +V+ + V
Sbjct: 315 HCSPAQVNFPEEQKV 329
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
A+A A +V V+ G +H+VA+ + + TWG G G+LGH + +D VP + F
Sbjct: 7 AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP 66
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
+ +VI ++ + Q+Y W G+L + N D P+P+ L G ++
Sbjct: 67 GI---TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G+ H V +SWG Q G+LG G + S +P+ + EG+ V +A G
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLLPQTIQAFEGISVKMIAAGAE 181
Query: 395 HSLVIVDRTNV 405
H+ + + ++
Sbjct: 182 HTAAVTEDGDI 192
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
H +A+ +G+ Y WG N+ GQ+G GD P V+ + K+ + G HT+ T
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 172/349 (49%), Gaps = 50/349 (14%)
Query: 80 YTWGRNERGQLGHG--------DKIQRD-----RPTIVSELSKYKIKKAGAGRSHTVVVT 126
++WG + G+ G G + IQ++ +P + ++L IKK G +H+++VT
Sbjct: 65 WSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVT 120
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT--VW--LSSVEGA 182
E G L G N +GQLG G++ N E EV T AD W L++ +
Sbjct: 121 ESGRLLTCGLNDNGQLGLGNLENASE-------FEEVKGTESIADVAAGFWHTLAASKKG 173
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ G ++GQLGH D++VKLA E P+ I L I +VACG+ H++
Sbjct: 174 KLYAWGSNKHGQLGH--------HDTAVKLAVE----PQEILLLRDAPIKQVACGSYHSM 221
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
A+ G VYTWGFG +GRLGH +DE++P+RV+ N+ + I AG SS +
Sbjct: 222 ALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENI----SSIHAGFEYSSAVST 277
Query: 303 GGQLYMWG----KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
G++++WG + GD P++ ++R + G+ H + S + +WGHA
Sbjct: 278 SGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHA 337
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIVDRTNV 405
+G LG+G P +D + + VACG H+LV+ +V
Sbjct: 338 THGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDV 386
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK----IKKAGAGRS 120
C H + V GR T G N+ GQLG G+ SE + K I AG
Sbjct: 111 CGGAHSMIVTESGRLLTCGLNDNGQLGLGNLEN------ASEFEEVKGTESIADVAAGFW 164
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
HT+ ++ G A+G NKHGQLG +++ +EP + L + + ACG+ ++ L+
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224
Query: 178 SVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + G +G+LGHG T++E+ P+ + AL GE I +
Sbjct: 225 --KDGEVYTWGFGAHGRLGHGSTEDEF---------------MPKRVEALVGENISSIHA 267
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGS 294
G ++ AV + G V+ WG+G + LG ++KD+ P +D P ++ ++ GS
Sbjct: 268 GFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDF--------PTSIRQLAFGS 319
Query: 295 VNSSCTAGGGQLYMWG 310
+++ + G L+ WG
Sbjct: 320 FHAAAVSHSGMLFTWG 335
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 6 AEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAG 64
A M+ E+G+ LL CG +G GNL + + + G + I VAAG
Sbjct: 114 AHSMIVTESGR-----LLTCGLNDNGQLGL------GNLENASEFEEVKGTESIADVAAG 162
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHT 122
H +A +G+ Y WG N+ GQLGH D + P + L IK+ G H+
Sbjct: 163 F--WHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHS 220
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
+ +T+DG +G+ HG+LG GS +E P V LV E +++ G +++ +S+
Sbjct: 221 MALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVST--S 278
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G + LG G D +LA P +I L A G+ H
Sbjct: 279 GKVFVWGYGHFYVLGQG--------DKKDQLAPVVLDFPTSIRQL--------AFGSFHA 322
Query: 242 VAVDSKGYVYTWGFGGYGRLGH 263
AV G ++TWG +G LGH
Sbjct: 323 AAVSHSGMLFTWGHATHGPLGH 344
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
V P + L I+ VA C S H +A+ +G YTWG G+LGHG P V
Sbjct: 197 VEPQEILLLRDAPIKQVA--CGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRV 254
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L I AG ++ V+ G +G+ LG G ++++ P V + +
Sbjct: 255 EALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPV-VLDFPTSIR 313
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G+ +S + G +G LGHG K ++ L P +
Sbjct: 314 QLAFGSFHAAAVS--HSGMLFTWGHATHGPLGHG------LKSPNIILEPTVLDAPAQL- 364
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +VACG+ HT+ V G V+++G GG G+LG D + P+++ F
Sbjct: 365 ----QNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRF 414
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 170/358 (47%), Gaps = 35/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCY-TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+ V+AG + H VA+ +EG +WGR E GQLGHGD R PT++S +I
Sbjct: 23 VVLVSAG--ASHSVAL-LEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI 79
Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
G HT +E+ + ++GW G+LG G+ + P PVR L ++ ACG
Sbjct: 80 CGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHC- 138
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ G + + G Q GQLG GT T+DS + P+ I A G + +
Sbjct: 139 -LAVTMGGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFEGICVKMI 183
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G HT AV G +Y WG+G YG LG ++ D +VP +V + + ++ +I+ G
Sbjct: 184 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMV----LIACGW 239
Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
++ + G LY +G K +GD D ++P + L + + G H + +
Sbjct: 240 RHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTS 299
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D WG ++G++G G S P +V V VACG+ H+L ++ NV
Sbjct: 300 DGKLYGWGWNKFGQVGAGDSVDHCS--PVQVMFPAEQKVAQVACGWRHTLAYTEKKNV 355
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P +R L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA--CGDSHCLAVTMGGEVQSWGRNQNGQ 157
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 158 LGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 217
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + E + ACG T+ +SS + G +YGQLGHG
Sbjct: 218 RFVPEKVSLVEGEKMVLIACGWRHTITVSS--SGILYTYGWSKYGQLGHGD--------- 266
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL + +++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 267 -----FEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVD 321
Query: 269 EWVPRRV 275
P +V
Sbjct: 322 HCSPVQV 328
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G+ Y WG N+ GQ+G GD + P V ++ K+ + G HT+ TE
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEK 352
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFT--VWLSSVEG 181
N A+G GQLG G I + +P + + S+ ++ FT VW+S E
Sbjct: 353 KNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGSGSKKLESSTAVPFTAKVWVSPSER 412
Query: 182 ASIL---NAGLPQYGQLGHGTDNEYNTKD 207
+++ P G G+G D D
Sbjct: 413 YALVPDEKVAKPGVGTAGNGADASVPEND 441
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 133 bits (335), Expect = 2e-28, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 46/327 (14%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSH 121
+SC H VAVD + Y+WG + GQLGHG ++ P + + + K+ G +H
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAH 1150
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA------TACGADFTVW 175
T+V+ + G+ FGWN GQLG G+ +N P+R SE+ TA A +
Sbjct: 1151 TMVLKKSGDLFTFGWNDSGQLGLGNFKNR--AVPMRIETSEIVGIHGERITAIAAGHSHS 1208
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ ++ I + G GQLGHG E RP+ I L G+ I+K++
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGN--------------IEKSLRPKQIDELKGKPIIKIS 1254
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV------LPPEAV 289
CG HTVA+ VY WG G + LG+ K+E P+ ++ F + L A
Sbjct: 1255 CGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTAT 1314
Query: 290 ISAGSVNSS----CTAGGGQLYMWGKLKNNGD------DWMYPKPLMDLSGWNLRCMDSG 339
++A S GGG+ GKL GD D +P + L+ N+ SG
Sbjct: 1315 VTAAENGSDRGNVYICGGGE---HGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSG 1371
Query: 340 N-MHHFVGADSSCISWGHAQYGELGYG 365
+ + + + +WG+ +G++G G
Sbjct: 1372 SEFSAIITNNGALYTWGYGNFGQIGNG 1398
Score = 118 bits (296), Expect = 6e-24, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP--LVGVD---IRFVAAGCVSCHCV 71
+K G+L G W+ G+ N P R+ +VG+ I +AAG H +
Sbjct: 1155 KKSGDLFTFG---WNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAG--HSHSI 1209
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
G Y+WG N +GQLGHG+ + RP + EL I K G HTV ++E +
Sbjct: 1210 MCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSV 1269
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS----ILN 186
+G +H LG+GS +NE+ P + ++ ++ CG T +++ E S +
Sbjct: 1270 YCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYI 1329
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G ++G+LG G D +K + +P P I +L IV + G+ + + +
Sbjct: 1330 CGGGEHGKLGTGGD---------LKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITN 1380
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
G +YTWG+G +G++G+ + +D W+P ++ +
Sbjct: 1381 NGALYTWGYGNFGQIGNGKTEDMWLPTKISL 1411
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 30/310 (9%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATA 167
K G H V++ DG +G N GQLG G + + +P R S + +
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL- 226
CG + +V + + I + G +YGQLGHG Q P+ I
Sbjct: 1093 CGGEHSVAVD--QSFQIYSWGSSRYGQLGHGV--------------LTPQNLPKKIEDFT 1136
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G+ ++ +A G HT+ + G ++T+G+ G+LG K+ VP R++ + +
Sbjct: 1137 GGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGE 1196
Query: 287 E-AVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG 339
I+AG +S G +Y WG N + + PK + +L G + + G
Sbjct: 1197 RITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCG 1256
Query: 340 NMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ H ++ +S WG ++ LG G K+ PK ++ + V CG H+
Sbjct: 1257 HFHTVAISELNSVYCWGQGEHMCLGNG--SNKNELSPKMIEFFINKKIEKVVCGLYHTAT 1314
Query: 399 IVDRTNVGER 408
+ N +R
Sbjct: 1315 VTAAENGSDR 1324
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4312 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4371
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4372 LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAID 4431
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4432 IACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4477
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4478 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4537
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4538 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4562
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4563 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4605
Query: 406 GERLDQL 412
ERL L
Sbjct: 4606 SERLRPL 4612
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3158 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3217
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3218 NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKP 3277
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3278 KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3330
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3331 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3383
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3384 QPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3439
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 3440 G------LDAVFVNRVACGSSHSIAWG 3460
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 169/362 (46%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V + G+ Y G G+LG G P + L
Sbjct: 3126 SRLRPI------HIAGGSKSLFIVGQN--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3177
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L S+ +
Sbjct: 3178 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIR 3237
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG D+S +L +P+ +A
Sbjct: 3238 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNSTQL------KPKLVA 3281
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3282 ALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3341
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3342 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3397
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3398 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3455
Query: 396 SL 397
S+
Sbjct: 3456 SI 3457
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 144/336 (42%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4239 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4298
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4299 GRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4356
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G + +ACG+ H+ A+ + G+V TWG G
Sbjct: 4357 HGNRMSYD--------------RPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 4402
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4403 RYGRLGHGDSEDQLRPQLVEALLGYRAI--DIACGSGDAQTLCINDDDNVWSWGDGDYGK 4460
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4461 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4520
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4521 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4554
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 157/366 (42%), Gaps = 45/366 (12%)
Query: 61 VAAGCVSCH-------CVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYK 111
+A G VS H + D+ WG N++ QLG G K++ PT +S+ +
Sbjct: 3072 MAGGSVSLHGDHGMAGALDQDLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLR 3129
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATAC 168
G +V ++G A G +G+LG G N P + L V + A
Sbjct: 3130 PIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHS 3189
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + L +++G + + G + G+LGHG + +PR + L
Sbjct: 3190 GGKHALAL-TLDG-KVFSWGEGEDGKLGHGNRTTLD--------------KPRLVETLRS 3233
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ I VACG++H+ A+ S+G +YTWG G YGRLGH + + P+ V V+
Sbjct: 3234 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQ--- 3290
Query: 289 VISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGN 340
++ GS ++ A G ++ W GKL G + P + LSG + ++ G
Sbjct: 3291 -VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGA 3349
Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ + +WG Y LG+G G + P+ + L G VI VA G H L +
Sbjct: 3350 QFSLALTRAGEVWTWGKGDYYRLGHG--GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3407
Query: 400 VDRTNV 405
D V
Sbjct: 3408 TDAGQV 3413
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 28/270 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + I +A+ C H +A+D+ Y+WG E +LGHGD R PT ++
Sbjct: 609 PQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITL 668
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L + +K G S++ +T GN +G + +LG G+ ++ P+ V L E+
Sbjct: 669 LDRC-VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIID 727
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ L + G YG+LG+G N S + E+ P+
Sbjct: 728 VALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG-----NLNGSMSPVLVESLPK------ 776
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEW--VPRRVDVFQRN 281
+ +V G ++A+ + G +Y+WG LGH+ E+ +W VPR + Q
Sbjct: 777 -----VQRVFAGAQFSMALTTDGQLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHK 829
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++ ++ SSC G+++ WG+
Sbjct: 830 RIVDVAVGVAHCLALSSC----GEVFGWGR 855
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 214 YEAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
++ + P+ + +A ETIV +A C H +A+D Y+WG G RLGH + V
Sbjct: 603 FKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV 662
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPL 325
P ++ + R +AV S +++ T G LY WG+ N DD P +
Sbjct: 663 PTKITLLDRCV----KAVFCGCSYSAAITCSGN-LYTWGRGTYARLGHGNSDDQPLPTVV 717
Query: 326 MDLSGWNL--RCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
M L+ + + SG+ H + ++ +WG A YG+LG G
Sbjct: 718 MALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG 760
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 18 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 75
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 76 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 134
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 135 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 179
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 180 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 235
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 236 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 295
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 350
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 95 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 152
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 153 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 212
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ S ++ G +YGQLGHG
Sbjct: 213 RLVPERVTSTGGEKMSMVACGWRHTI--SVSYSGALYTYGWSKYGQLGHGD--------- 261
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 262 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 316
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 317 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 358
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 76
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 77 ADHTV-AYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 121
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 122 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 177
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 237
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 238 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 295
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQ 317
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 3053 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 3112
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 3113 LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAID 3172
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 3173 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 3218
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTW G + RLGH P++V Q ++
Sbjct: 3219 LAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 3278
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 3279 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 3303
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 3304 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 3346
Query: 406 GERLDQL 412
ERL L
Sbjct: 3347 SERLRPL 3353
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 1895 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 1954
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 1955 NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 2014
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E S+ + G +G+LG G +T
Sbjct: 2015 KLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDT------- 2067
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 2068 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 2120
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 2121 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 2176
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 2177 G------LDAVFVNRVACGSSHSIAWG 2197
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 167/362 (46%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V + G+ Y G G+LG G P + L
Sbjct: 1863 SRLRPI------HIAGGSKSLFIVGQN--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 1914
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L S ++
Sbjct: 1915 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIR 1974
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +A
Sbjct: 1975 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVA 2018
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 2019 ALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 2078
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 2079 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 2134
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 2135 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 2192
Query: 396 SL 397
S+
Sbjct: 2193 SI 2194
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V ++G
Sbjct: 1829 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVGQNGKV 1886
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 1887 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 1944
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + L + I VACG++H+ A+ S+G
Sbjct: 1945 EGEDGKLGHGNRTTLD--------------KPRLVETLRSKKIRDVACGSSHSAAISSQG 1990
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 1991 ELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQ----VACGSRDAQTLALTEDGSV 2046
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 2047 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 2106
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 2107 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2150
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 143/336 (42%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 2980 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 3039
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 3040 GRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 3097
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G + +ACG+ H+ A+ + G+V TWG G
Sbjct: 3098 HGNRMSYD--------------RPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 3143
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 3144 RYGRLGHGDSEDQLRPQLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 3201
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +W + LG+G
Sbjct: 3202 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDH 3261
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 3262 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 3295
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 218 PRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P P + L + KVA G H +A+ G V++WG G G+LGH + PR V
Sbjct: 1906 PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLV 1965
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDD--WMYPKPLMDLS 329
+ + + ++ GS +S+ + G+LY WG +GD+ + PK + L+
Sbjct: 1966 ETLRSKKI----RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALA 2021
Query: 330 G---WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G + C + D S SWG +G+LG G G + S P +++ L G+ V
Sbjct: 2022 GRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRG--GSEGSDTPHEIERLSGIGV 2079
Query: 387 ISVACGYGHSLVIVDRTNVGE 407
I + CG SL + T GE
Sbjct: 2080 IQIECGAQFSLAL---TRAGE 2097
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ +G Y WG E G+LGHG+++ DRP ++
Sbjct: 4146 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEH 4205
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4206 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4265
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4266 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4311
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4312 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4371
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4372 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4396
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4397 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4439
Query: 406 GERLDQL 412
ERL L
Sbjct: 4440 SERLRPL 4446
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 2975 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3034
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3035 NRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3094
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L S V ACG+ L+ E ++ + G +G+LG G
Sbjct: 3095 KLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-------------- 3140
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
E P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3141 GSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3200
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3201 QPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3256
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S ++WG
Sbjct: 3257 G------LDAVFVNRVACGSSHSMAWG 3277
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ + G G+LG G P + L
Sbjct: 2943 SRLRPI------HIAGGSKSLFVVSQD--GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 2994
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 2995 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3054
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3055 DIACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVT 3098
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
AL G +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3099 ALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3158
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3159 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3214
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3215 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3272
Query: 396 SL 397
S+
Sbjct: 3273 SM 3274
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
DV WG N++ QLG G K++ PT +S+ + G VV++DG
Sbjct: 2909 DVPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFVVSQDGKV 2966
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 2967 FACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3024
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I +ACG++H+ A+ S+G
Sbjct: 3025 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDIACGSSHSAAISSQG 3070
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V + V+ ++ GS ++ A G +
Sbjct: 3071 ELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQ----VACGSRDAQTLALTEDGAV 3126
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3127 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3186
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3187 YRLGHG--GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3230
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 32/333 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4073 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4132
Query: 140 GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G + P+ + V +V + G L+ + G + G+L
Sbjct: 4133 GRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4189
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG +L+Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG
Sbjct: 4190 GHGN-----------RLSYD---RPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4235
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
G YGRLGH + +D+ P+ V+ + + +G + C ++ W G
Sbjct: 4236 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4293
Query: 311 KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
KL G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4294 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4354 HVRR--PKKVAALQGKKIISIATGSLHCVACSD 4384
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ LV ++ V GC + A+ + G YTWGR G+LGHG + PT+V
Sbjct: 684 PTKIESLVR-RVKSVYCGC--SYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMA 740
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L +++ G+G +HT+ +T +G A+G +G+LG+ S + ++P + CL V
Sbjct: 741 LKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL-PRVQ 799
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
G+ F++ L+ EG L +G+ LGH E N + SV PR
Sbjct: 800 RVFAGSQFSLALTG-EGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 842
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQ 279
I +L + IV VA G H +A+ S G ++ WG R + P V +
Sbjct: 843 LITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG---------RNDNQQICPASVCSEPLL 893
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
R +L + A + +CTA Q +W + G P ++DL R +D
Sbjct: 894 RQPILVTLPTLPASGM--ACTA--VQSLIWTQSSRQGVPLRAPF-VIDLGEPTFRLLD 946
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A+ C H +AVD Y+WG + +LGHGD R+ PT + L + ++K G S
Sbjct: 644 IASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCS 702
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
++ +T GN +G +G+LG G ++ P+ V L +V A G+ L
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+ + N S L E PR + +V G+
Sbjct: 763 NEGLVYAWGDGDYGKLGNASCN-----SSLQPLLIECLPR-----------VQRVFAGSQ 806
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
++A+ +G +Y+WG LGH R + VPR + Q ++ ++ G
Sbjct: 807 FSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVD----VAVGVT 860
Query: 296 NSSCTAGGGQLYMWGKLKNN 315
+ + G+++ WG+ N
Sbjct: 861 HCLALSSAGEIFGWGRNDNQ 880
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 229 ETIVK----VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
E++V+ V CG +++ A+ +G +YTWG G YGRLGH D+ +P V + + V+
Sbjct: 688 ESLVRRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVV 747
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+ + +G ++ C G +Y W GKL N + L++ R
Sbjct: 748 --DVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQRVFAGS 805
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ + SWG A + ++P+ + L+ ++ VA G H L +
Sbjct: 806 QFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLAL 865
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 6 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 122
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 123 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 167
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 168 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 223
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSD 283
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 338
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 83 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 141 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 200
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ S ++ G +YGQLGHG
Sbjct: 201 RLVPERVTSTGGEKMSMVACGWRHTI--SVSYSGALYTYGWSKYGQLGHGD--------- 249
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 250 -----LEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 304
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 305 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 346
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 65 ADHTV-AYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 109
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 165
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 225
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGFRHTMALTSD 283
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQ 305
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ + + SP ++R D + V C H +AV + WGR GQ
Sbjct: 291 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 348
Query: 90 LGHGDKIQRDRPTIVSELS 108
LG G+ + R+ P I+ LS
Sbjct: 349 LGIGESVDRNFPKIIEALS 367
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 140/306 (45%), Gaps = 28/306 (9%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P +R L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG H+V +TE+G +GW ++G LG G +
Sbjct: 152 LGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 211
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P V ++ ACG T+ +SS + G +YGQLGHG + KD
Sbjct: 212 RCIPEKVSVDCDKMVLVACGWRHTISVSS--SGELYTYGWSKYGQLGHG-----DCKDHL 264
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
V P + A + + I +V+ G HT+A+ + G +Y WG+ +G++G + D
Sbjct: 265 V---------PHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDR 315
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD--DWMYPK 323
P +V V A IS G ++ +Y WG+ N GD DW YPK
Sbjct: 316 CSPVQVKFPHDQKV----AQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPK 371
Query: 324 PLMDLS 329
+ LS
Sbjct: 372 IIEALS 377
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 166/358 (46%), Gaps = 36/358 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG H VA+ +WGR E GQLGHGD R PT +S L +I
Sbjct: 17 VLLISAG--GSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E + ++GW G+LG G+ + P P+R L + ACG D
Sbjct: 75 GADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG GT T+DS V P+ I G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQTFQGVPIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H+VA+ G +Y WG+G YG LG ++ D +P +V V VL ++ G
Sbjct: 179 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVL-----VACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G+LY +G K +GD D + P L S L C SG H + +
Sbjct: 234 HTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSD-KLICQVSGGWRHTMALTT 292
Query: 350 --SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V V ++CG+ H++ + ++ NV
Sbjct: 293 GGQLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVAQISCGWRHTIAVTEKDNV 348
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 32/313 (10%)
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+Q T S ++ AG SH+V + ++G + GQLG G + + P+
Sbjct: 1 MQEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQ 60
Query: 156 VRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ L ++ + CGAD T+ S + + + G +G+LGHG N+ D +
Sbjct: 61 LSALDAQQIVSVVCGADHTLAYSESK-VEVYSWGWGDFGRLGHG-----NSSDLFI---- 110
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P+ I AL G I ++ACG +H +AV +G V +WG G+LG +D VP++
Sbjct: 111 -----PQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQK 165
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMD 327
+ FQ P +++AG+ +S G+LY WG L + D + K +D
Sbjct: 166 IQTFQG----VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVD 221
Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ + G H V + ++G ++YG+LG+G K +P K+ +
Sbjct: 222 CD--KMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDC--KDHLVPHKLQAFSDKLI 277
Query: 387 ISVACGYGHSLVI 399
V+ G+ H++ +
Sbjct: 278 CQVSGGWRHTMAL 290
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ +G Y WG E G+LGHG+++ DRP +V
Sbjct: 4290 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4349
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4350 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4409
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4410 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4455
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH + P++V Q ++
Sbjct: 4456 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIIS 4515
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G+++ WG + D+
Sbjct: 4516 ----IATGSLHCVACSDAGEVFTWG----DNDE--------------------------- 4540
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4541 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4583
Query: 406 GERLDQL 412
ERL L
Sbjct: 4584 SERLRPL 4590
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3124 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3183
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3184 NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3243
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3244 KLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSST------- 3296
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3297 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3349
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3350 QPIAGLRGHRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3405
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S ++WG
Sbjct: 3406 G------LDAVIVNRVACGSSHSMAWG 3426
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 169/367 (46%), Gaps = 44/367 (11%)
Query: 45 VSPT--RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
SPT RLRP+ +A G S V+ D G+ Y G G+LG G P
Sbjct: 3087 FSPTISRLRPI------HIAGGSKSLFVVSQD--GKVYACGEGTNGRLGLGVTHNVPLPH 3138
Query: 103 IVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL- 159
+ L +Y +KK +G H + +T DG ++G + G+LG G+ +P V L
Sbjct: 3139 QLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALR 3198
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ ACG+ + +SS + GL +YG+LGHG DN Q +
Sbjct: 3199 AKKIRDIACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLK 3242
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ +AAL+G +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3243 PKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIER 3302
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGW 331
V+ I G+ S G+++ WGK L + GD + P+P+ L G
Sbjct: 3303 LSGIGVIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGH 3358
Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G +H D+ + +WG +G+ G G + P V L+ + V VA
Sbjct: 3359 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVIVNRVA 3416
Query: 391 CGYGHSL 397
CG HS+
Sbjct: 3417 CGSSHSM 3423
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 154/348 (44%), Gaps = 40/348 (11%)
Query: 74 DVEGRC--YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
D E C WG N++ QLG G K++ PT +S+ + G VV++DG
Sbjct: 3056 DQELPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSPTISRLRPIHIAGGSKSLFVVSQDG 3113
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILN 186
A G +G+LG G N P + L V + A G + L +++G + +
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFS 3171
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + G+LGHG + + +PR + AL + I +ACG++H+ A+ S
Sbjct: 3172 WGEGEDGKLGHGNRSTLD--------------KPRLVEALRAKKIRDIACGSSHSAAISS 3217
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGG 304
+G +YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQ----VACGSRDAQTLALTEDG 3273
Query: 305 QLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
++ W GKL G + P + LSG + ++ G + + +WG
Sbjct: 3274 AVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3333
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3334 DYYRLGHG--GDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQV 3379
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 142/333 (42%), Gaps = 32/333 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4217 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4276
Query: 140 GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G + P+ + V +V + G L+ + G + G+L
Sbjct: 4277 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4333
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG
Sbjct: 4334 GHGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4379
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
G YGRLGH + +D+ P+ V+ + + +G + C ++ W G
Sbjct: 4380 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4437
Query: 311 KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
KL G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4438 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG--S 4495
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ PKKV L+G +IS+A G H + D
Sbjct: 4496 VEHVRRPKKVAALQGKKIISIATGSLHCVACSD 4528
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 26/213 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ LV + ++ V GC + A+ + G YTWGR G+LGHG + P +V
Sbjct: 689 PTKIESLVRL-VKSVYCGC--SYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMA 745
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L +++ G+G +HT+ +T +G A+G +G+LG+GS + + P + CL V
Sbjct: 746 LKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL-PRVQ 804
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
GA F++ L S EG L +G+ LGH E N + SV PR
Sbjct: 805 RVFAGAQFSLAL-SCEGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 847
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
I L + IV VA G H +A+ S G ++ WG
Sbjct: 848 LITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+AA C H +AVD Y+WG + +LGHGD R+ PT + L + +K G S
Sbjct: 649 IAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYCGCS 707
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWL 176
++ +T GN +G +G+LG G+ ++ P+ V L V +V A G T+ L
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDV-ALGSGDAHTLCL 766
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+S EG + G YG+LG+G+ N S + + PR + +V
Sbjct: 767 TS-EGL-VFAWGDGDYGKLGNGSCN-----SSLLPQLIDCLPR-----------VQRVFA 808
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISA 292
G ++A+ +G +Y+WG LGH R + VPR + Q ++ ++
Sbjct: 809 GAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITGLQHKRIVD----VAV 862
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN 315
G + + G+++ WG+ N
Sbjct: 863 GVAHCLALSSSGEIFGWGRNDNQ 885
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 8/190 (4%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
A+ P I +L + V CG +++ A+ G +YTWG G YGRLGH D+ +P
Sbjct: 684 HARELPTKIESLV-RLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAM 742
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLS 329
V + + V+ + + +G ++ C G ++ W GKL N + L+D
Sbjct: 743 VMALKDHQVV--DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL 800
Query: 330 GWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
R + + SWG A + ++P+ + L+ ++ V
Sbjct: 801 PRVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDV 860
Query: 390 ACGYGHSLVI 399
A G H L +
Sbjct: 861 AVGVAHCLAL 870
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SPT L + V I+ VA HC+A+ EG ++WG E G+LGHG++ DRP ++
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIE 436
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 437 SLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVI 496
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + S+ + G YG+LG G + P+ +
Sbjct: 497 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKI--------------PQKVE 542
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL G+ +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q NV+
Sbjct: 543 ALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVI 602
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ G+++ WG
Sbjct: 603 S----IATGSLHCVACTDQGEVFTWG 624
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 30/336 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ + WG N RGQLG + + PT L+ + + G V G
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAG--- 364
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ G G+ S+ + ++ + + A G + LSS EG + + G + G+LG
Sbjct: 365 GRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSS-EG-EVFSWGEAEDGKLG 422
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG N + RPR I +L G+ +V +A G H+ + S G ++TWG G
Sbjct: 423 HGNRNSCD--------------RPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKG 468
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----K 311
YGRLGH + +D+ P+ V+ + V+ + +G + C ++ WG K
Sbjct: 469 RYGRLGHGDSEDQMKPKLVEALKGVRVI--DVACGSGDAQTLCITDDDSVWSWGDGDYGK 526
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P+ + L G + ++ G+ S C+ +WG Y LG+G
Sbjct: 527 LGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHG--SD 584
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P+KV L+G +VIS+A G H + D+ V
Sbjct: 585 DHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEV 620
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 38/311 (12%)
Query: 101 PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
PT++ + IKK +G H + ++ +G ++G + G+LG G+ + P +
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L EV A G + ++S + G +YG+LGHG DS E Q
Sbjct: 438 LRGKEVVDIAAGGAHSACITST--GELFTWGKGRYGRLGHG--------DS------EDQ 481
Query: 218 PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+P+ + AL G ++ VACG+ T+ + V++WG G YG+LG +P++V
Sbjct: 482 MKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKV 541
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLS 329
+ V+ + GS S G +Y WGK L + DD + P+ + L
Sbjct: 542 EALIGQGVVK----VECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQ 597
Query: 330 GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKK--VDILEGMHV 386
G N+ + +G++H D +WG G+LG G +SA+P+ V L+G +
Sbjct: 598 GKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDG----STSAIPRPRLVAALQGKKI 653
Query: 387 ISVACGYGHSL 397
VACG HSL
Sbjct: 654 NRVACGSAHSL 664
>gi|119624859|gb|EAX04454.1| hCG42063, isoform CRA_a [Homo sapiens]
Length = 329
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 138/302 (45%), Gaps = 52/302 (17%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
L NL P R L GV IR V +G + H + + +EG+ ++WGRNE+GQLGHGD + +
Sbjct: 17 LGQNLWGPHRYGCLAGVRIRTVISGSCAAHSLLITMEGKLWSWGRNEKGQLGHGDTKRVE 76
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
P + L A G +HT+ +T+ G+ AFG NK GQLG + + ++P
Sbjct: 77 APRFIEGLCHEVTMSAACGWNHTLALTKTGSVFAFGENKMGQLGLANQTDAVQPR----- 131
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
AD LGH +D ++ + ++ Y+ +
Sbjct: 132 ----------AD----------------------NLGHNSDGKFIF--GARRIEYDCELV 157
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +A +T + V +K V++WGFGGYGRLGH EQKDE V R V +F
Sbjct: 158 PPRLAIFIEKT------KDGQILPVPNK-RVFSWGFGGYGRLGHAEQKDEMVRRLVKLFD 210
Query: 280 RNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
P I AG S + G L+ + + MYPK + DL GW ++ +
Sbjct: 211 ----FPWRGASQIYAGYTCSLAVSEVGGLFFRRATTTSRESAMYPKAVQDLCGWRIQSLA 266
Query: 338 SG 339
G
Sbjct: 267 CG 268
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ +G Y WG E G+LGHG+++ DRP ++
Sbjct: 4275 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEH 4334
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4335 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4394
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4395 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4440
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4441 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4500
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4501 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4525
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4526 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4568
Query: 406 GERLDQL 412
ERL L
Sbjct: 4569 SERLRPL 4575
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3108 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3167
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3168 NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3227
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G
Sbjct: 3228 KLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-------------- 3273
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
E P I L+G ++++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3274 GSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3333
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3334 QPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3389
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S ++WG
Sbjct: 3390 G------LDAVFVNRVACGSSHSMAWG 3410
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 3076 SRLRPI------HIAGGSKSLFVVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3127
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3128 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIR 3187
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3188 DIACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVT 3231
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
AL G +++VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3232 ALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3291
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3292 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3347
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3348 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3405
Query: 396 SL 397
S+
Sbjct: 3406 SM 3407
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 38/339 (11%)
Query: 81 TWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG N++ QLG G K++ PT +S+ + G VV++DG A G
Sbjct: 3049 VWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106
Query: 139 HGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+G+LG G N P + L V + A G + L +++G + + G + G+L
Sbjct: 3107 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWGEGEDGKL 3164
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG + + +PR + AL + I +ACG++H+ A+ S+G +YTWG
Sbjct: 3165 GHGNRSTLD--------------KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3210
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW---- 309
G YGRLGH + + P+ V V+ ++ GS ++ A G ++ W
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQ----VACGSRDAQTLALTEDGAVFSWGDGD 3266
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G + P + LSG + ++ G + + +WG Y LG+G
Sbjct: 3267 FGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG- 3325
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G + P+ + L G VI VA G H L + D V
Sbjct: 3326 -GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3363
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 141/333 (42%), Gaps = 32/333 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4202 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYGSG 4261
Query: 140 GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G + P+ + V +V + G L+ + G + G+L
Sbjct: 4262 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4318
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG
Sbjct: 4319 GHGNRMSYD--------------RPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4364
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
G YGRLGH + +D+ P+ V+ + + +G + C ++ W G
Sbjct: 4365 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4422
Query: 311 KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
KL G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4423 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4483 HVRR--PKKVAALQGKKIISIATGSLHCVACSD 4513
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ LV ++ V GC + A+ + G YTWGR G+LGHG+ + P +V
Sbjct: 660 PTKIESLVR-RVQSVYCGC--SYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMA 716
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L +++ G+G +HT+ +T G A+G +G+LG+GS + ++P + CL V
Sbjct: 717 LKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL-PRVQ 775
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
G+ F++ L+ EG L +G+ LGH E N + SV PR
Sbjct: 776 RVFAGSQFSLALTC-EGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 818
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
I +L + IV VA G H +A+ S G ++ WG
Sbjct: 819 LITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 28/260 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+AA C H +AVD Y+WG + +LGHGD R+ PT + L + +++ G S
Sbjct: 620 IAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCS 678
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
++ +T GN +G +G+LG G+ ++ P+ V L +V A G+ L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G + G YG+LG+G+ N S L E PR + +V G+
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCN-----SSLQPLLIECLPR-----------VQRVFAGSQ 782
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
++A+ +G +Y+WG LGH R + VPR + Q ++ ++ G
Sbjct: 783 FSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVH----VAVGVA 836
Query: 296 NSSCTAGGGQLYMWGKLKNN 315
+ + G+++ WG+ N
Sbjct: 837 HCLALSSNGEIFGWGRNDNQ 856
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 8/190 (4%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
A+ P I +L + V CG +++ A+ +G +YTWG G YGRLGH D+ +P
Sbjct: 655 HARELPTKIESLV-RRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAM 713
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLS 329
V + + VL + + +G ++ C GG +Y W GKL N + L++
Sbjct: 714 VMALKDHQVL--DVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL 771
Query: 330 GWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
R + + SWG A + ++P+ + L+ ++ V
Sbjct: 772 PRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHV 831
Query: 390 ACGYGHSLVI 399
A G H L +
Sbjct: 832 AVGVAHCLAL 841
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 6 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 122
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 123 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 167
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 168 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 223
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 283
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 338
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 83 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 141 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 200
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ S ++ G +YGQLGHG
Sbjct: 201 RLVPERVTSTGGEKMSMVACGWRHTI--SVSYSGALYTYGWSKYGQLGHGD--------- 249
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 250 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 304
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 305 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 346
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 65 ADHTV-AYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 109
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 165
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 225
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 283
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQ 305
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++R D + V C H +AV + WGR GQLG G+ + R+ P I+
Sbjct: 307 SPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 364
Query: 106 ELS 108
LS
Sbjct: 365 ALS 367
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3200 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3256
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3257 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2974 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3028
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3088
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3141
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3142 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3193 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3306
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3307 VQGLEGQKITRVACGSSHSV 3326
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 163/370 (44%), Gaps = 43/370 (11%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELS 108
+P G +R AAG S A + + + WG N++ QLG G KI+ P+ LS
Sbjct: 2941 KPNTGSLVRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLS 2994
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVT 164
+ + G VT +G A G +G+LG SG++ + + + V +
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKV 3054
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G + L +V+G + + G G+LGH + + +PR I
Sbjct: 3055 AVHSGGRHAMAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIE 3098
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL + I +ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+
Sbjct: 3099 ALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158
Query: 285 PPEAVISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCM 336
++ GS ++ A G ++ W GKL G + P+ + L+G + +
Sbjct: 3159 Q----VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQI 3214
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
+ G S + +WG Y LG+G P+ V+ L G ++ VA G H
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALH 3272
Query: 396 SLVIVDRTNV 405
L + D V
Sbjct: 3273 CLAVTDTGQV 3282
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + L S EG + + G + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL-SFEG-EVYSWGEAEDG 4074
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFE 4062
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4222
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4283 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK L DL +RC ++ + D +WG LG+G ++ PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
+ L+G VI VA G H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3094 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3151
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3212 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3270 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 4301 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4341
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ YTWG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
I K G ++ +T+DG +G + +LG G+ + P + L +V
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 715
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ T L+ E + + + G N+ ++++ +P P A+ L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 759
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G V++WG G GRLGH + P+ + I+ GS
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + ++ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAL 673
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 176/379 (46%), Gaps = 39/379 (10%)
Query: 37 KGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
+GA G+ VS P R + ++AG + H VA+ +WGR E GQLGHGD
Sbjct: 5 EGAASGSEVSGPIR-------QVILISAG--ASHSVALLSGNIVCSWGRGEDGQLGHGDA 55
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPS 154
R PT +S L I G HT +E + ++GW G+LG G+ + P
Sbjct: 56 EDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQ 115
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
P++ L S ++ ACG L+ + + G Q GQLG GT T+DS V
Sbjct: 116 PIKALHSLKIRQIACGDSHC--LAVTMDGEVQSWGRNQNGQLGLGT-----TEDSLV--- 165
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I A G +I VA G HT AV G +Y WG+G YG LG ++ D VP
Sbjct: 166 ------PQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPE 219
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMD 327
+V + + ++ +++ G ++ + G LY +G K +GD D + P +
Sbjct: 220 KVSLVNGDKMI----MVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEA 275
Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G H + +D + WG ++G++G G S + K + +
Sbjct: 276 LRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSL 335
Query: 387 ISVACGYGHSLVIVDRTNV 405
+ ++CG+ H+L I +R NV
Sbjct: 336 VQISCGWRHTLAITERQNV 354
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L + IR +A C HC+AV ++G +WGRN+ GQ
Sbjct: 97 WGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 154
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + IK AG HT VTEDG +GW ++G LG G +
Sbjct: 155 LGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 214
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + + + ACG T+ +SS G + G +YGQLGHG
Sbjct: 215 RLVPEKVSLVNGDKMIMVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 263
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL I ++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 264 -----FEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNID 318
Query: 269 EWVPRRV 275
P +V
Sbjct: 319 HCSPVQV 325
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ + C H ++V G YT+G ++ GQLGHGD P V L I G
Sbjct: 228 KMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGG 287
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVW 175
HT+ +T DGN +GWNK GQ+G G + P V+ + +CG T
Sbjct: 288 WRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHT-- 345
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L+ E ++ + G GQLGHG + N
Sbjct: 346 LAITERQNVFSWGRGTNGQLGHGESMDRN 374
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ +PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP
Sbjct: 92 SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR 151
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
++ L ++ AG +H+ VT G+ +G ++G+LG ++++P V L
Sbjct: 152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG+ L + ++ + G YG+LG G + P
Sbjct: 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PM 257
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q
Sbjct: 258 KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 317
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ I+ GS++ C G++Y WG
Sbjct: 318 KVI----AIATGSLHCVCCTEDGEVYTWG 342
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 160/372 (43%), Gaps = 33/372 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 20 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 80 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 137
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 138 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 183
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 241
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 301
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEE 426
P++V L+G VI++A G SL V T GE D +G+
Sbjct: 302 --DDHVRRPRQVQGLQGKKVIAIATG---SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNA 356
Query: 427 IDRNSTVPPKKG 438
I R V +G
Sbjct: 357 IQRPRLVAALQG 368
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 66 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 183
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 184 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 229
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 230 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 285
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 346 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 382
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 150 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 207
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 267
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 268 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 325
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 326 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 247 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 303
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 304 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 363
Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
L +V ACG+ T+ W +S
Sbjct: 364 AALQGKKVNRVACGSAHTLAWSTS 387
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 165/358 (46%), Gaps = 35/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L +++
Sbjct: 18 VLLISAG--ASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +E + ++GW G+LG G+ + P P++ L + ACG
Sbjct: 76 GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHC-- 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG GT T+DS V P+ I A G ++ VA
Sbjct: 134 LAVTMDGEVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFQGVSVKMVA 179
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP +V + ++ ++ G
Sbjct: 180 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVK----VACGWR 235
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVG--A 347
++ + G LY +G K +GD D + P L L NL SG H + +
Sbjct: 236 HTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTS 294
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D WG ++G++G G S P +V V+ ++CG+ H+L + +R NV
Sbjct: 295 DGKLYGWGWNKFGQVGVGDNVDHCS--PVQVKFPHEQKVVHISCGWRHTLAVTERQNV 350
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV ++G +WGRN+ GQ
Sbjct: 95 WGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 152
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG +GW ++G LG G +
Sbjct: 153 LGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 212
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + ++ ACG T+ +SS G + G +YGQLGHG
Sbjct: 213 RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 261
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL I +++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 262 -----FEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVD 316
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V V+ IS G ++ ++ WG+ N
Sbjct: 317 HCSPVQVKFPHEQKVVH----ISCGWRHTLAVTERQNVFSWGRGTN 358
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +L L I ++ G H +A+ +G+ Y WG N+ GQ+G GD + P V
Sbjct: 266 LTPHKLEALQENLISEISGGWR--HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 323
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
+ K+ G HT+ VTE N ++G +GQLG G + P + L ++
Sbjct: 324 KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383
Query: 163 -----VTATACGADFTVWLSSVEGASIL--NAGLPQYGQLGHGTDNEYNTKDSSVK 211
T+ + +W+S E +++ G Q G G N+ + +S VK
Sbjct: 384 GGQQIETSKVDPSTGRIWVSPSERYAVVPDETGSTQTGVSVKGNGNDASVPESDVK 439
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 175/370 (47%), Gaps = 39/370 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
V+P R L+ ++AG + H VA+ +WGR E GQLGHGD R PT +
Sbjct: 10 VTPPPRRVLI------ISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQL 61
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
S L ++I G HTV +E + ++GW G+LG G+ + P P++ L
Sbjct: 62 SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR 121
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG D ++EG + + G Q GQLG G +T+DS V P+
Sbjct: 122 IKQIACG-DSHCLAVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQK 165
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I A G I VA G HT AV G +Y WG+G YG LG ++ D VP RV
Sbjct: 166 IQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCM 336
+ ++++ G ++ + G LY +G K +GD D + P L L + +
Sbjct: 226 M----SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQI 281
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G H + +D WG ++G++G G + S P +V I + V+ V+CG+ H
Sbjct: 282 SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS--PVQVRIPDDQKVVQVSCGWRH 339
Query: 396 SLVIVDRTNV 405
+L + +R NV
Sbjct: 340 TLAVTERNNV 349
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSAGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V + V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRIPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
>gi|321262146|ref|XP_003195792.1| hypothetical protein CGB_H3360C [Cryptococcus gattii WM276]
gi|317462266|gb|ADV24005.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 518
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 184/431 (42%), Gaps = 61/431 (14%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGC 65
M E G +L CG T W GR++ G + +L+ P LR L V + G
Sbjct: 1 MANESAEGSNWGRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGP 60
Query: 66 VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-----YKIKKAGAGRS 120
+ + + +D+ G Y +GR +G I + P +S LS K AGRS
Sbjct: 61 SANYAIILDIHGAAYLFGRPPAMVQSNG-VISENIPLKISPLSVGSPEGTKWVNGAAGRS 119
Query: 121 HTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
H ++V G+ G N GQ+G + ++ VR +++ G F+++
Sbjct: 120 HFLLVDSRGDVWGCGNNIVGQIGLPVATAVDKLTKVAGPWVRDPEAKIVQVTAGHTFSLF 179
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+S + +G ++GQLG+G E K K+AY+ + PR + I+++A
Sbjct: 180 LTST--GQVYASGSSEFGQLGNGKTGERLVKAG--KIAYDIEVPPRLVQGFENVKIIEIA 235
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H++A+D GYVY+WGF GY RLG ++QKD +
Sbjct: 236 SGNQHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLI------------------------ 271
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSSCI 352
S GQ Y + K+ + D+ + SG HF+ + +
Sbjct: 272 -SPLAGSTGQPYT--RFKH----------IQDVMACKVIKTSSGGCTHFITTPDPEGGVM 318
Query: 353 SWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
+ G Q YGELG G KS+ P+K+ L G+ +I VA G +L + + L
Sbjct: 319 TVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVAGGAFFTLFLARPNSALSDL 378
Query: 410 DQLDVYDGKAS 420
D+ ++ AS
Sbjct: 379 DRYPIHINSAS 389
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4026 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4085
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 4086 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + + G YG+LG G + P I
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI--------------PMKID 4191
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4192 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4251
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4252 ----AIATGSLHCVCCTEDGEVYTWG 4273
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L I+ VA H +A+ V+G+
Sbjct: 3008 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G ++G ++
Sbjct: 3066 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3125
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++ P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 3126 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG 3185
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 3186 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3231
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3232 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3279
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 173/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2967 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRL 3021
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y IKK +G H + +T DG ++G G+LG S
Sbjct: 3022 GLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3081
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 3082 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNT---- 3134
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q RP+ + L G +++VACG+ T+A+ +G+V++WG G +G+LG
Sbjct: 3135 ---------TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG 3185
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ VP+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3186 GSEGCNVPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3241
Query: 321 YPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP M L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3242 VRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3299
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3300 VQGLEGQKITRVACGSSHSV 3319
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4010
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 4011 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4068
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4069 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4114
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD Q + V+ + +G + C ++ W
Sbjct: 4115 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4172
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4173 YGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4231
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4232 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4259
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2951 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3008
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG+I + + + V + A G + L +V+G +
Sbjct: 3009 KIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMAL-TVDG-KVF 3066
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 3067 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3112
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3113 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDE 3168
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3228
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3229 GDYFRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3275
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 23/271 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L I +AA H +A+ G ++WG + G+LGHGD + P ++
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMI 532
Query: 105 SELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+ + + G +++ +T DG +G +G+LG GS ++ P V
Sbjct: 533 GTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFK 592
Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V ACG+ L+ E + + G YG+LG G + T
Sbjct: 593 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 638
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + L IVKV CG+ +VA+ G VYTWG G RLGH + P+ +D Q
Sbjct: 639 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 698
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ ++ GS + G++ WG
Sbjct: 699 GKKVVD----VAVGSTHCLALTDDGEVLSWG 725
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 153/366 (41%), Gaps = 55/366 (15%)
Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P ++ LS KI K A H + ++ +G ++G G+LG G EP +
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGT 534
Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V ACG+ ++ +++ + G YG+LGHG+
Sbjct: 535 FNGKQAGKHVVHVACGSTYSAAITA--DGELYTWGRGNYGRLGHGSS------------- 579
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
E Q P + A G +V VACG+ T+AV G V++WG G YG+LG
Sbjct: 580 -EDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 638
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPL 325
P+ V+ Q +++ + GS S GQ+Y WGK L + D+ + YPK L
Sbjct: 639 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 694
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + G+ H + D +SWG + + K PK + L
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQ--PKALPGLNSK 752
Query: 385 HVISVACGYGHSLVIVDRT--NVGER-----------LDQLDVYDGKASSQDNEEIDRNS 431
H++ ++CG G S + +VG+R +QLD+ Q +E +D +S
Sbjct: 753 HIVGISCGPGQSFAWSSSSEWSVGKRVPFVVDVCPMTFEQLDLL----LRQVSEGMDGSS 808
Query: 432 TVPPKK 437
PP +
Sbjct: 809 DWPPPQ 814
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + I+K +G H + ++ +
Sbjct: 3997 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE 4056
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4057 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTW 4114
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ VACG+ T+ +
Sbjct: 4115 GKGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLT 4160
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P ++D V+ E GS S G
Sbjct: 4161 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 4216
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4276
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4277 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4313
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 30/263 (11%)
Query: 151 IEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P + L S ++ A D +L+ + + G G+LGHG D Y +
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEE--- 528
Query: 210 VKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P+ I AG+ +V VACG+ ++ A+ + G +YTWG G YGRLGH
Sbjct: 529 ----------PKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS 578
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-W 319
+D+ P V F+ V+ + +G + GQ++ W GKL G D
Sbjct: 579 SEDQTTPMVVTAFKGLKVV--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 636
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK + L ++ + G+ + D +WG LG+G + PK +
Sbjct: 637 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG--TDEHVRYPKLL 694
Query: 379 DILEGMHVISVACGYGHSLVIVD 401
D L+G V+ VA G H L + D
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTD 717
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G +TWG+ G+LGHGD + +P +V
Sbjct: 4081 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4138
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4139 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV 4198
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4199 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4256
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4257 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + RP +V
Sbjct: 3087 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKV 3144
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3145 LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 3204
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3205 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVG 3262
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3263 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3320
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + V C S VA+ G YTWG+ + +LGHG RP V
Sbjct: 4187 PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 4244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L K+ G H V TEDG +G N GQLG G+ P V L ++
Sbjct: 4245 LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4304
Query: 166 TACGADFTV-WLSS 178
ACG+ T+ W +S
Sbjct: 4305 VACGSAHTLAWSTS 4318
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S VA+ +G+ YTWG+ + +LGHG P ++ L K+
Sbjct: 647 DLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVA 706
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
G +H + +T+DG L++G N Q N+ +P + L S+ + +CG
Sbjct: 707 VGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 115/306 (37%), Gaps = 60/306 (19%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ GK+ G ++ CGST A+ GR + +P
Sbjct: 526 LEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTP 585
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ G+ + VA G +AV G+ ++WG + G+LG G P +V +L
Sbjct: 586 MVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 645
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
I K G +V +T+DG +G + +LG G+ + P
Sbjct: 646 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPK------------- 692
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
L S++G +++ + L D E N K + + +P+A
Sbjct: 693 -------LLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQPKA 745
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV----F 278
+ L + IV ++CG G + W +G R VP VDV F
Sbjct: 746 LPGLNSKHIVGISCG---------PGQSFAWSSSSEWSVGKR------VPFVVDVCPMTF 790
Query: 279 QRNNVL 284
++ ++L
Sbjct: 791 EQLDLL 796
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3239 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3296
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3297 PTLVQGLEGQKITRVACGSSHSVAWT 3322
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 167/351 (47%), Gaps = 29/351 (8%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R V C S H V + EG YTWGR + G+LGHGD + P +V EL I++ G
Sbjct: 35 RIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
HT VT G+ +G +G+LG G+ P V L +V ACG+ TV L
Sbjct: 95 SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVL- 153
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+E + G + G GHG D E + Q P + L G+ IV+++
Sbjct: 154 -LENKDVYTWGDKENGVSGHG-DTEGH------------QYLPCPVEELRGKNIVQISAC 199
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT A+ G V+T+G G +GRLGH ++++ V R V+ V ++ G ++
Sbjct: 200 GFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRV----KQVACGGFHT 255
Query: 298 SCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-S 350
+ G++Y WG ++ +GD + P + L + + G H D+
Sbjct: 256 AAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGE 315
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG+ +G+LG+ + + +PK VD+LEG VISVA H++ +VD
Sbjct: 316 VYTWGNGDHGKLGHNDTTKVT--LPKLVDVLEGKRVISVASYNEHTVALVD 364
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 161/332 (48%), Gaps = 31/332 (9%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y+WGR E GQLG GD + RP + L++ +I + G HTVV+T++G +G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
G+LG G + P V L + + CG+ T + +V G + G YG+LGH
Sbjct: 63 DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAV-TVSG-DLYTWGGGMYGKLGH 120
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + ++T P + L G + +VACG+ HTV + VYTWG
Sbjct: 121 GNETGHST--------------PFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKE 166
Query: 258 YGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
G GH + + +++P V+ + N++ ISA +++ + G+++ +G+ K
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKNIVQ----ISACGFHTAALSEFGEVFTFGEGKFGR 222
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
N+ + + + L+G ++ + G H ++ +WG ++G+LG+G
Sbjct: 223 LGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVN 282
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
K+ +P +V+ L V+ + CG+ H++ + D
Sbjct: 283 KT--VPTRVESLVEKLVVQITCGWSHTVALTD 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VY+WG G G+LG + D+ P +D ++ I+ GS ++ G++Y W
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQ----IACGSGHTVVLTDEGEVYTW 58
Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
G+L + + W + P+ + +L G N+R + G+ H V +WG YG+L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G + + P V+ L+GM V VACG H++V+++ +V
Sbjct: 119 GHG--NETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDV 159
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4008 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4067
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 4068 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4127
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4128 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4173
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4174 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4233
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4234 ----AIATGSLHCVCCTEDGEVYTWG 4255
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3007 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN 3066
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3067 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3126
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3127 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3175
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3176 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3232
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3233 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3262
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2950 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3004
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3005 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSR 3064
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3065 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3117
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3118 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3168
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3169 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3224
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3225 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3282
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3283 VQGLEGQKITRVACGSSHSV 3302
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
+R AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2924 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2977
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3037
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L +V+G I + G G+LGH + + +PR I AL + I
Sbjct: 3038 HAMAL-TVDG-KIFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3081
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3082 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3137
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3138 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3197
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3198 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3255
Query: 403 TNV 405
V
Sbjct: 3256 GQV 3258
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3993 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4050
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4051 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4096
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4097 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4154
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4155 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4213
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4214 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4241
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 453 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 512
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 513 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 572
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 573 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 624
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 625 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 678
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 679 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 711
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3980 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTWG 4097
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4098 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4143
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 4144 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4199
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4200 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4259
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4260 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4295
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 461 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 511
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 512 LE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 566
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 567 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 624
Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK L DL +RC ++ + D +WG LG+G ++ PK +
Sbjct: 625 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 680
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
+ L+G VI VA G H L + + + V
Sbjct: 681 EGLKGKKVIDVAAGSTHCLALTEDSEV 707
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3070 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3127
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3128 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3187
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3188 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVG 3245
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3246 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4160 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4216
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4217 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4276
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 4277 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4317
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3222 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3279
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3280 PTLVQGLEGQKITRVACGSSHSVAWT 3305
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ YTWG+ + +LGHG + P ++ L K+
Sbjct: 633 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 692
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 693 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +V++AC
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 478
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G V++WG G GRLGH + P+ + I+ GS
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 539 YSAAITAEGELYTWGR-GNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTL 595
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + ++ V CG S+ +
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAL 649
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 512 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 571
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
I K G ++ +T+DG +G + +LG G+ + P + L +V
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 691
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ T L+ E + + + G N+ ++++ +P P A+ L
Sbjct: 692 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 735
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 736 DTKHIVGIACGPAQSFA 752
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G + K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2921 GSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2976
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
++ GS + G++Y G+ N + P+ + LS + ++ + S
Sbjct: 2977 --VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHS 3034
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3035 GGRHAMALTVDGKIFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3092
Query: 398 VI 399
I
Sbjct: 3093 AI 3094
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 167/357 (46%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 8 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 65
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG
Sbjct: 66 GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHC-- 123
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 124 LAVTXEGEVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKXVA 169
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + + ++ G
Sbjct: 170 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV----TSTGGEKXSXVACGWR 225
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMH-HFVGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 226 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSD 285
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 340
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 128/286 (44%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV EG +WGRN+ GQ
Sbjct: 85 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTXEGEVQSWGRNQNGQ 142
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 143 LGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 202
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E + ACG T+ S ++ G +YGQLGHG
Sbjct: 203 RLVPERVTSTGGEKXSXVACGWRHTI--SVSYSGALYTYGWSKYGQLGHGD--------- 251
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT A+ S G +Y WG+ +G++G D
Sbjct: 252 -----LEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLD 306
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 307 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 348
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ + + SP ++R D + V C H +AV + WGR GQ
Sbjct: 293 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 350
Query: 90 LGHGDKIQRDRPTIVSELS 108
LG G+ + R+ P I+ LS
Sbjct: 351 LGIGESVDRNFPKIIEALS 369
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 2838 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIE 2897
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 2898 SLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + + G YG+LG G + P I
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3003
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3004 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3063
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 3064 ----AIATGSLHCVCCTEDGEVYTWG 3085
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 1836 GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 1895
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G ++G ++G+LG G ++ P V+
Sbjct: 1896 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK 1955
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 1956 VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNI----------- 2004
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2005 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVE 2061
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ++ WG
Sbjct: 2062 GLRGKKIVH----VAVGALHCLAVTETGQVFAWG 2091
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV EG+ Y G G+L
Sbjct: 1779 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTAEGKVYACGEATNGRL 1833
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P +S LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 1834 GLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 1893
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 1894 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNT---- 1946
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q RP+ + L G +V+VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 1947 ---------TQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG 1997
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 1998 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2053
Query: 321 YPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKK 377
KP M L G + + G +H ++ +WG +G+ G G + P
Sbjct: 2054 VRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG--TTTVNRKPTL 2111
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 2112 VQGLEGQKITRVACGSSHSV 2131
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 2823 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-ELYSWGEAEDG 2880
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G +YTW
Sbjct: 2881 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELYTW 2926
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 2927 GKGRYGRLGHGDSEDQLKPKLVEALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 2984
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3043
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3044 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3073
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 1763 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAEG 1820
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG+I + S + V + A G + L +V+G +
Sbjct: 1821 KVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 1878
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 1879 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 1924
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 1925 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQ----VACGSRDAQTLALTDE 1980
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2040
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + + V
Sbjct: 2041 GDYFRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV 2087
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + I+K +G H + ++ +
Sbjct: 2809 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE 2868
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 2869 GELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELYTW 2926
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ VACG+ T+ +
Sbjct: 2927 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGHRVIDVACGSGDAQTLCLT 2972
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 2973 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 3028
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3088
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 3089 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 3125
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G YTWG+ G+LGHGD + +P +V
Sbjct: 2893 PRVIESLRGVEVVDIAAG--GAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA 2950
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 2951 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 3010
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 3011 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3068
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ I +VACG+ HT+A
Sbjct: 3069 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + RP +V
Sbjct: 1899 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKV 1956
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 1957 LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2016
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV------KLAYEA- 216
CGA F++ L+ + + G Y +LGHGTD K V K+ + A
Sbjct: 2017 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVR-KPQMVEGLRGKKIVHVAV 2073
Query: 217 --------------------------------QPRPRAIAALAGETIVKVACGTNHTVA 243
+P + L G+ I +VACG++H+VA
Sbjct: 2074 GALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 2990 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3046
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3047 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3106
Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
L ++ ACG+ T+ W +S
Sbjct: 3107 AALQGKKINRVACGSAHTLAWSTS 3130
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ + WG N+ GQ G+G +
Sbjct: 2051 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 2108
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSVAWT 2134
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V ++ VA HC+A+ EG Y+WG E G+LGHG++ DRP +V
Sbjct: 2246 TPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 2305
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L ++ AG +H+ +T G+ ++G ++G+LG G ++++P V L V
Sbjct: 2306 SLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 2411
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 2412 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 2471
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 2472 ----AIATGSLHCVCCTEDGEVYTWG 2493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 64/374 (17%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 1217 GISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 1276
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 1277 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 1336
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 1337 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV----------- 1385
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G +G L
Sbjct: 1386 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELR-------------- 1428
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL-----SGW 331
P ++ +G+V+ +++N G + P P L GW
Sbjct: 1429 --------PDSHIVQSGNVSDRM-----------RVRNKG-ACLIPLPFFGLVSPREMGW 1468
Query: 332 NLRCMDSGN-MHHFVGADS-------SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ ++ + + F G +WG +G+ G G + P V LEG
Sbjct: 1469 EIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 1526
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 1527 QKITRVACGSSHSV 1540
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 145/331 (43%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2230
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 2231 GAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2288
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR + +L G +V +A G H+ + G +Y+W
Sbjct: 2289 KLGHGNRSPCD--------------RPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSW 2334
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 2335 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 2392
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 2451
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 2452 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 2481
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I VAA H +A+ G ++WG + G+LGHGD +
Sbjct: 181 AYNSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 240
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 241 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 300
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 301 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 352
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 353 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 406
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 407 LLEGLQGKKVVD----VAAGSTHCLALTEDSEVHSWG 439
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 137/306 (44%), Gaps = 37/306 (12%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 1201
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G + L +V+G +
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 1259
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 1260 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 1305
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 1306 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 1361
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 1362 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGR 1421
Query: 357 AQYGEL 362
+GEL
Sbjct: 1422 GDFGEL 1427
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 2217 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSE 2276
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P V L EV A G + ++ + +
Sbjct: 2277 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITV--AGDLYSW 2334
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 2335 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 2380
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 2381 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 2436
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 2437 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 2497 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 2533
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 154/384 (40%), Gaps = 53/384 (13%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W +G + A N++ P + L + + +A C + + GR Y N
Sbjct: 133 WGLIGWKYYA---NVIGPIQCEGLANLGVTQIA--CAEKRFLILSRNGRVYVQAYNS-DT 186
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSI 147
LG P +V L+ I K A H + + G ++G G+LG G
Sbjct: 187 LG---------PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDT 237
Query: 148 RNEIEPSPVRCLV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
EP + L V ACG+ ++ +++ EG + G YG+LGHG+
Sbjct: 238 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-- 293
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGR 260
E Q P + L G ++ V+CG+ T+AV G V++WG G YG+
Sbjct: 294 ------------EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------ 314
LG P+ ++ Q +++ + GS S GQ+Y WGK N
Sbjct: 342 LGRGGSDGCKTPKLIEKLQDLDIVK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 397
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
+ YPK L L G + + +G+ H + DS SWG + + + +
Sbjct: 398 TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKP 455
Query: 374 MPKKVDILEGMHVISVACGYGHSL 397
P + L+ H++ +ACG S
Sbjct: 456 QPSALPGLDTKHIVGIACGPAQSF 479
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG---------DTVP 239
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 240 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 294
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 295 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 352
Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK L DL +RC ++ + D SWG LG+G ++ PK +
Sbjct: 353 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLL 408
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
+ L+G V+ VA G H L + + + V
Sbjct: 409 EGLQGKKVVDVAAGSTHCLALTEDSEV 435
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 2398 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 2454
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 2455 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 2514
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 2515 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 2555
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
P L+ +V+VA G+ AV +G VY G GRLG +PR++
Sbjct: 1173 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITAL 1232
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY----------PKPLMDL 328
N V+ AV S G + T G+++ WG+ GDD P+ + L
Sbjct: 1233 S-NYVVKKVAVHSGGRHAMALTV-DGKVFSWGE----GDDGKLGHFSRMNCDKPRLIEAL 1286
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+R + G+ H + + +WG +YG LG+G + PK V +L G VI
Sbjct: 1287 KTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVI 1344
Query: 388 SVACG 392
VACG
Sbjct: 1345 QVACG 1349
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ +GK+ G ++ CGST A+ GR + P
Sbjct: 240 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 299
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
I K G ++ +T+DG ++G + +LG G+ + P + L +V
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDV 419
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ T L+ E + + + G N+ ++++ +P+P A+ L
Sbjct: 420 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPQPSALPGL 463
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 464 DTKHIVGIACGPAQSFA 480
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 1330 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI 1389
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-------------IRNE- 150
L+ + + G ++ +T+ G +G G+L S +RN+
Sbjct: 1390 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKG 1449
Query: 151 --IEPSPVRCLVS--EVTATACGADFTVWLSSVEG---------ASILNAGLPQYGQLGH 197
+ P P LVS E+ G + +SS G + G +GQ G+
Sbjct: 1450 ACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGN 1509
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
GT +P + L G+ I +VACG++H+VA
Sbjct: 1510 GTTT--------------VNRKPTLVQGLEGQKITRVACGSSHSVA 1541
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 18/183 (9%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
AG I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 1130 AGSLIRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 1186
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 1187 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVH 1243
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 1244 SGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 1301
Query: 397 LVI 399
I
Sbjct: 1302 AAI 1304
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
Y WG N+ GQ G+G +PT+V L KI + G SH+V T
Sbjct: 1497 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1543
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG + DRP +V
Sbjct: 4031 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVE 4090
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKIE 4196
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4256
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4257 ----AIATGSLHCVCCTEDGEVYTWG 4278
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3030 GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3089
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3090 CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3149
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3150 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3198
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3199 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3255
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3256 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3285
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 168/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2973 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3027
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3028 GLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3087
Query: 148 RNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3088 MNCDKPRLIEALRAKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3140
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3141 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3191
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3192 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3247
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3248 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3305
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3306 VQGLEGQKITRVACGSSHSV 3325
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 4016 GAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4073
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG+ + + RPR + +L G +V VA G H+ V + G +YTW
Sbjct: 4074 KLGHGSRSPCD--------------RPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+V Q + V+ + +G + C ++ W
Sbjct: 4120 GKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4236
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4237 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4266
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
V + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2960 VRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3017
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3018 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3075
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3076 EGDDGKLGHFSRMNCD--------------KPRLIEALRAKRIRDIACGSSHSAALTSSG 3121
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3122 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3177
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3178 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3237
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3238 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3281
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ PR
Sbjct: 649 ------PKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPR 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ V+ ++AGS + +++ WG
Sbjct: 703 LLEGLHGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + I+K +G H + ++ +G
Sbjct: 4003 AVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG GS P V L EV A G + +++ + G
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4120
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + L G +V VACG+ T+ +
Sbjct: 4121 KGRYGRLGHS--------DS------EDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTD 4166
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP +++ V+ E GS S G +
Sbjct: 4167 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVE----CGSQFSVALTKSGAV 4222
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4223 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4283 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG--------- 531
Query: 208 SSVKLAYEAQPRPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A +G+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC + D SWG LG+G ++
Sbjct: 645 GCKTPKLIEKLQDLEVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P+ ++ L G VI VA G H L + + + V
Sbjct: 701 PRLLEGLHGKKVIDVAAGSTHCLALTEDSEV 731
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4086 PRVVESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEV 4143
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4144 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGV 4203
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4204 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4261
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3093 PRLIEALRAKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3150
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3151 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3210
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3211 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3268
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3269 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4183 RGGSDGCKV-PMKIESLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + +S G+L EYN
Sbjct: 4300 AALQGKKVNRVACGSAHTLAWSTSKPSS--------AGKLPAQVPMEYN 4340
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3245 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3302
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3303 PTLVQGLEGQKITRVACGSSHSVAWT 3328
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G V++WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVAL 673
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
++ K G +V +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPR------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L + G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3970 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4029
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 4030 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + + G YG+LG G + P I
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4135
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4136 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4195
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4196 ----AIATGSLHCVCCTEDGEVYTWG 4217
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L ++ VA H +A+ V+G+
Sbjct: 2973 GKIYACGEATNGRLGL--GLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3030
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G ++G ++
Sbjct: 3031 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3090
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++ P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 3091 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3150
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 3151 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3196
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3197 FRLGHGTDVHVRKPQIVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3244
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 174/382 (45%), Gaps = 44/382 (11%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2932 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRL 2986
Query: 91 GHG---DKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
G G IQ P +S LS Y +KK +G H + +T DG ++G G+LG
Sbjct: 2987 GLGLSSGTIQI--PRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHF 3044
Query: 146 SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
S N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 3045 SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNT-- 3099
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLG 262
Q RP+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3100 -----------TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3148
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDD 318
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3149 RGGSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 3204
Query: 319 WMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMP 375
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3205 VHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKP 3262
Query: 376 KKVDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3263 TLVQGLEGQKITRVACGSSHSV 3284
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 144/327 (44%), Gaps = 35/327 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L I +AA H +A+ G Y+WG + G+LGHGD + P ++
Sbjct: 433 LAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALI 492
Query: 105 SELS----KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+ S ++ + G +++ VT DG +G +G+LG GS + P V L
Sbjct: 493 TTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALK 552
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V ACG+ L+ E + + G YG+LG G + T
Sbjct: 553 GQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 598
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + L IVKV CG+ +VA+ G VYTWG G RLGH + P+ +D Q
Sbjct: 599 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 658
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---KLKNNGDDWMY-----PKPLMDLSGW 331
V+ I+ GS + G+++ WG KL++ D ++ PK L L+
Sbjct: 659 GKKVVD----IAVGSTHCLALTDEGEVHSWGSNDKLQHF--DTLFPNKKQPKALPGLNSK 712
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQ 358
++ + G F A SSC W Q
Sbjct: 713 HIVGISCGPGQSF--AWSSCSEWSVGQ 737
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3955 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4012
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4013 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4058
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD Q + V+ + +G + C ++ W
Sbjct: 4059 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4116
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4117 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4175
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4176 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4203
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2916 AASIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 2973
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG+I+ + S + V + A G + L +V+G +
Sbjct: 2974 KIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 3031
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 3032 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3077
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3078 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDE 3133
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3193
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3194 GDYFRLGHG--TDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQV 3240
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 55/366 (15%)
Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P ++ LS KI K A H + ++ G ++G G+LG G EP+ +
Sbjct: 435 PMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITT 494
Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+V ACG+ ++ +++ + G YG+LGHG+ + T
Sbjct: 495 FSGKQTGKQVVQIACGSTYSAAVTA--DGELYTWGRGNYGRLGHGSSEDVTT-------- 544
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P + AL G+ +V VACG+ T+AV G V++WG G YG+LG
Sbjct: 545 ------PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 598
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPL 325
P+ V+ Q +++ + GS S GQ+Y WGK L + D+ + YPK L
Sbjct: 599 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 654
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + G+ H D + SWG +L + + PK + L
Sbjct: 655 DSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSND--KLQHFDTLFPNKKQPKALPGLNSK 712
Query: 385 HVISVACGYGHSLV--IVDRTNVGER-----------LDQLDVYDGKASSQDNEEIDRNS 431
H++ ++CG G S +VG+R +QLD+ Q +E +D +S
Sbjct: 713 HIVGISCGPGQSFAWSSCSEWSVGQRVPFVVDVCHMTFEQLDLL----LRQVSEGMDGSS 768
Query: 432 TVPPKK 437
PP +
Sbjct: 769 DWPPPQ 774
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3941 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4000
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4001 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTW 4058
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ VACG+ T+ +
Sbjct: 4059 GKGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLT 4104
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4105 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4160
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4220
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4221 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4257
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G +TWG+ G+LGHGD + +P +V
Sbjct: 4025 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4082
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4142
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4143 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4200
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4201 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + RP +V
Sbjct: 3052 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKV 3109
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3110 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3169
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3170 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVG 3227
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3228 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4122 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4178
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4179 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4238
Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
L ++ ACG+ T+ W +S
Sbjct: 4239 AALQGKKINRVACGSAHTLAWSTS 4262
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 60/306 (19%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE ++ +GK+ G ++ + CGST AV GR ++ +P
Sbjct: 486 LEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTP 545
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G + VA G +AV G+ ++WG + G+LG G P +V +L
Sbjct: 546 MLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 605
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
I K G +V +T+DG +G + +LG G+ + P
Sbjct: 606 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPK------------- 652
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL-----AYEAQPRPRA 222
L S++G +++ + L + E ++ S+ KL + + +P+A
Sbjct: 653 -------LLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQPKA 705
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV----F 278
+ L + IV ++CG G + W +G R VP VDV F
Sbjct: 706 LPGLNSKHIVGISCG---------PGQSFAWSSCSEWSVGQR------VPFVVDVCHMTF 750
Query: 279 QRNNVL 284
++ ++L
Sbjct: 751 EQLDLL 756
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3204 DVHVRKPQIVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3261
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3262 PTLVQGLEGQKITRVACGSSHSVAWT 3287
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4198 SLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G ++G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3200 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3256
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3257 GLRGKKIIH----VAVGALHCLAVTDTGQVYAWG 3286
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 172/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2974 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3028
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3029 GLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3088
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNT---- 3141
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3142 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3193 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3249 VRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3306
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3307 VQGLEGQKITRVACGSSHSV 3326
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + +++ P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV+CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ + AGS + ++Y WG
Sbjct: 703 LLEGLQGEKVID----VVAGSTHCLALTEDSEVYSWG 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G +YTW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 4120
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG SG++ + + + V + A G + L +V+G + + G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 3076
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3077 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITSSG 3122
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3123 ELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3178
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G +I VA G H L + D V
Sbjct: 3239 FRLGHG--TDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQV 3282
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLYTWG 4121
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4122 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVE----CGSQFSVALTKSGAV 4223
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4284 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 155/384 (40%), Gaps = 53/384 (13%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W +G + A N+ P + L + + +A C + + GR YT N
Sbjct: 429 WGLIGWKYYA---NVSGPIQCEGLASLGVTQIA--CAEKRFLILSRNGRVYTQAYNS-DI 482
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSI 147
LG P +V L+ I K A H + + G ++G G+LG G
Sbjct: 483 LG---------PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDT 533
Query: 148 RNEIEPSPVRCLV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
EP + L V ACG+ ++ +++ EG + G YG+LGHG+
Sbjct: 534 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-- 589
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGR 260
E Q P + L G ++ V+CG+ T+AV G V++WG G YG+
Sbjct: 590 ------------EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------ 314
LG P+ ++ Q +++ +S GS S GQ+Y WGK N
Sbjct: 638 LGRGGSDGCKTPKLIEKLQDLDIVK----VSCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
+ YPK L L G + + +G+ H + DS SWG + + + +
Sbjct: 694 TEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSND--QCQHFDTLRITKP 751
Query: 374 MPKKVDILEGMHVISVACGYGHSL 397
P + L+ H++ +ACG S
Sbjct: 752 DPTALPGLDSKHIVGIACGPAQSF 775
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG---------DTVP 535
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + L ++ + G+ + D SWG LG+G ++ PK ++
Sbjct: 649 PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEG 706
Query: 381 LEGMHVISVACGYGHSLVIVDRTNV 405
L+G VI V G H L + + + V
Sbjct: 707 LQGEKVIDVVAGSTHCLALTEDSEV 731
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + +P +V
Sbjct: 3094 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKV 3151
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3212 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVG 3269
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+V+
Sbjct: 3270 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVS 3327
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L GV + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGVGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 4301 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4341
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
I K G +V +T+DG ++G + +LG G+ + P + L E V
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDV 715
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
G+ T L+ E + + + G N+ ++++ +P P A+ L
Sbjct: 716 VAGS--THCLALTEDSEVYSWG-----------SNDQCQHFDTLRI---TKPDPTALPGL 759
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 760 DSKHIVGIACGPAQSFA 776
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4286 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4345
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4346 SLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4451
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4452 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4511
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4512 ----AIATGSLHCVCCTEDGEVYTWG 4533
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3288 GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3347
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3348 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3407
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3408 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3456
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3457 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3513
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3514 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3543
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 3234 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3291
Query: 97 -QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P V+ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3292 GTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3351
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3352 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---------- 3398
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3399 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3455
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
+P+ ++ V I G+ S G ++ WGK +G D KP
Sbjct: 3456 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3511
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3512 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVHGLEG 3569
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3570 QKITRVACGSSHSV 3583
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4271 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4328
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G + VA G H+ V + G +YTW
Sbjct: 4329 KLGHGNRSPCD--------------RPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTW 4374
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4375 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4432
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4433 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4491
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4492 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4521
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 737 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 796
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 797 EEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 856
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 857 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 908
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 909 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 962
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 963 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 995
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 3215 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3272
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G L +V+G +
Sbjct: 3273 KVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATAL-TVDG-KVF 3330
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 3331 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALT 3376
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3377 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 3432
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3492
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3493 GDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3539
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4257 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4316
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4317 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTA--AGDLYTW 4374
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4375 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4420
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4421 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4476
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4477 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4536
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4537 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4573
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 741 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 791
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+ AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 792 DTVPLE-----EPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 846
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 847 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 904
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC ++ + D SWG LG+G ++
Sbjct: 905 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 960
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 961 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 991
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3351 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3408
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3409 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3468
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3469 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3526
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3527 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4438 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4494
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4495 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4554
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4555 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4595
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3503 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3560
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3561 PTLVHGLEGQKITRVACGSSHSVAWT 3586
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 762
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 763 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 823 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 879
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 880 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 933
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 796 LEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 855
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 916 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 962
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 963 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 1015
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 1016 LPGLDTKHIVGIACGPAQSFA 1036
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3781 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3840
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 3841 SLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3946
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3947 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4006
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4007 ----AIATGSLHCVCCTEDGEVYTWG 4028
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 2779 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN 2838
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2839 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2898
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2899 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 2947
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2948 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3004
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3005 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3034
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2722 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 2776
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 2777 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSR 2836
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 2837 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 2889
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2890 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2940
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2941 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2996
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3054
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3055 VQGLEGQKITRVACGSSHSV 3074
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3766 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3823
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G +YTW
Sbjct: 3824 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 3869
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 3870 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 3927
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3928 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3986
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 3987 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4014
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2706 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 2763
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G + L +V+G I
Sbjct: 2764 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KIF 2821
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 2822 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 2867
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 2868 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 2923
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2983
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 2984 GDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQV 3030
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3753 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLYTWG 3870
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 3871 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 3916
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 3917 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 3972
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3973 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4032
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4033 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4068
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR +A G S H A+ G YTWG E G+LGHGD + +P +V L +++ +
Sbjct: 2853 IRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2910
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +T++G ++G G+LG G P + L + V CGA F++
Sbjct: 2911 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSL 2970
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYN-------------------------TKDSS 209
L+ + + G Y +LGHGTD D+
Sbjct: 2971 ALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG 3028
Query: 210 VKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A+ +P + L G+ I +VACG++H+VA
Sbjct: 3029 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3933 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3989
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3990 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4049
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEY 203
L ++ ACG+ T+ S+ + A NAG LP + + E+
Sbjct: 4050 AALQGKKINRVACGSAHTLAWSTSKPA---NAGKLPTQVPMEYNHLQEF 4095
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2994 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3051
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+ ++ Q
Sbjct: 433 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2692 TGSLIRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2748
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2749 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 2805
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2806 SGGRHAMALTVDGKIFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2863
Query: 397 LVI 399
I
Sbjct: 2864 AAI 2866
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 832 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 891
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 892 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 951
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 952 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 997
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 998 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 1057
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 1058 ----AIATGSLHCVCCTEDGEVYTWG 1079
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 816
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 817 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 874
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 875 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 920
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 921 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 978
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 979 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1037
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 1038 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 1067
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 803 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 862
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 863 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 920
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 921 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 966
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 967 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 1022
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 1023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1082
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 1083 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 1119
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 16/191 (8%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+PR I AL + I +ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64
Query: 279 QRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSG 330
+ V+ ++ GS ++ A G ++ W GKL G + P+ + L+G
Sbjct: 65 LGHRVIQ----VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 120
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAM---PKKVDILEGMHV 386
+ ++ G S + +W +G+ +G G ++ + P V LEG +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180
Query: 387 ISVACGYGHSL 397
VACG HS+
Sbjct: 181 TRVACGSSHSV 191
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P + L IR +A G S H A+ G YTWG E G+LGHGD + +P
Sbjct: 2 NCDKPRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 59
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T++G ++G G+LG G P + L
Sbjct: 60 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 119
Query: 161 SE-VTATACGADFTVWLSS---VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ V CGA F++ L+ V + G +GQ G+GT
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTT--------------V 165
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVA 243
+P + L G+ I +VACG++H+VA
Sbjct: 166 NRKPTLVQGLEGQKITRVACGSSHSVA 192
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 984 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1040
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 1041 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1100
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
L +V ACG+ T+ S+ + AS L A +P +Y L
Sbjct: 1101 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 1143
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+ Y WG N+ GQ G+G +PT+V L KI + G SH+V T
Sbjct: 146 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 157/358 (43%), Gaps = 66/358 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ +PT + L V I+ VA HC+A+ +G ++WG E G+LGHG++ DRP
Sbjct: 4449 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4508
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ LS + G +H+ +T G+ L +G ++G+LG G ++++P V L+
Sbjct: 4509 LIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4568
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
ACG+ L + ++ + G YG+LG G + P
Sbjct: 4569 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PM 4614
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG + KV CG+ +VA+ G VYTWG G Y RLGH P++V Q
Sbjct: 4615 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4674
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
++ I+ GS++ + GG+++ WG + D+
Sbjct: 4675 KIIS----IATGSLHCVACSDGGEVFTWG----DNDE----------------------- 4703
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G + P+ V L+G H++ V CG H+L +
Sbjct: 4704 ------------------GQLGDGTV--SAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 147/332 (44%), Gaps = 30/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N RGQLG D + PT LS + + G VT DG A G+
Sbjct: 4380 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4439
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ V L + + A G + LSS + + G + G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4497
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Y+ RP+ I AL+G ++ +ACG+ H+ + S+G+V TWG G
Sbjct: 4498 HGNRDSYD--------------RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKG 4543
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4544 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4601
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 4602 LGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4659
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4660 DHVRRPKKVAALQGKKIISIATGSLHCVACSD 4691
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G+L CG GR + N+ +P ++ L ++ VA H +A+ ++G
Sbjct: 3291 QDGKLYACGE---GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3347
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ ++WG E G+LGHG+++ ++P ++ L +I+ G SH+ +T G +G
Sbjct: 3348 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3407
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
++G+LG G +++P V L V ACG+ L E + + G +G+LG
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3467
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E P + L G ++++ CG ++A+ G V+TWG G
Sbjct: 3468 RG--------------GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKG 3513
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH + P + + V+ ++ G+++ GQ+Y WG
Sbjct: 3514 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3563
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 173/375 (46%), Gaps = 41/375 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
G L G+ V PT L + +A G S V+ D G+ Y G N R LGH +
Sbjct: 3255 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 3312
Query: 95 KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
+ P V LS+Y +KK +G H + +T DG ++G + G+LG G+ +
Sbjct: 3313 NV--PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3370
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3371 PKLIETLRTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DN---------- 3417
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
Q +P+ + ALA +V+VACG+ T+ + +G V++WG G +G+LG +
Sbjct: 3418 ---CTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC 3474
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
+P +V+ V+ I G+ S G+++ WGK L + D + P
Sbjct: 3475 SIPHQVERLNGVGVMQ----IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPT 3530
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
P+ L G + + G +H DS + +WG +G+ G G + P V L+
Sbjct: 3531 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLD 3588
Query: 383 GMHVISVACGYGHSL 397
G+ V VACG HS+
Sbjct: 3589 GIFVNRVACGSSHSV 3603
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 135/332 (40%), Gaps = 52/332 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + L V+I +AA C H +A+ G ++WG E G+LGHGD +D PT +
Sbjct: 618 APKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIV 677
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
L++ ++ G S++ +T G +G +G+LG G+ ++ P+ V+ L + V
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI 737
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT---------KDSSVKL--- 212
A G L + + G +G+LG+GT N + D +VK+
Sbjct: 738 HVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSG 797
Query: 213 ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
E P+AI AL G+ IV +A G H +A+
Sbjct: 798 SHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALT 857
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G +Y WG + +L V R V PP I+ + AGG Q
Sbjct: 858 ASGELYGWGRNDFQQLC-----PPCVTRDPIVLLPILTTPPTLRIAGMA------AGGAQ 906
Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
+W G P ++DLS R +D
Sbjct: 907 SIVWCHSSTLGIPVKIPF-VVDLSEHTFRLLD 937
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + ++KD P I ALA + V CG++++ A+ + G +YT
Sbjct: 660 GRLGHG---DTSSKDI-----------PTRIVALAERQVTGVFCGSSYSAAITAAGELYT 705
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG G YGRLGH +D+ +P V V ++ V+ + G +S C G +Y WG
Sbjct: 706 WGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI--HVALGCGDAHSLCVTDTGIVYAWGDG 763
Query: 311 ---KLKN---NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
KL N NG L S ++ + +G D + SWG G LG+
Sbjct: 764 DFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGH 823
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + +A PK + LEG +++ +A G H L +
Sbjct: 824 G--HSEHTASPKAIQALEGKNIVDLAVGLAHCLAL 856
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + +A G S H + +G TWG+ G+LGHGD + +P +V
Sbjct: 4507 PKLIEALSGIGVIDIACG--SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4564
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L Y+ G+G + T+ +T+D N ++G +G+LG G P + L V
Sbjct: 4565 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4624
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
T CG+ F+V L+ S+ G Y +LGHG + L
Sbjct: 4625 TKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4682
Query: 213 ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
A RPR + +L G+ IVKV CG+ HT+A+
Sbjct: 4683 SLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742
Query: 246 S 246
+
Sbjct: 4743 T 4743
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V G S VA+ G YTWG+ + +LGHG+
Sbjct: 4604 RGGSDGCKV-PMKIESLAGLGVTKVECG--SQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4660
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G++ P V
Sbjct: 4661 HVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLV 4720
Query: 157 RCLV-SEVTATACGADFTVWLSSVE 180
+ L + CG+ T+ LS+ +
Sbjct: 4721 QSLQGKHIVKVICGSAHTLALSTYQ 4745
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
++SG H + +D SWG + G+LG+G + S PK ++ L G+ VI +ACG
Sbjct: 4469 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHG--NRDSYDRPKLIEALSGIGVIDIACGSA 4526
Query: 395 HSLVIVDRTNV 405
HS I + +V
Sbjct: 4527 HSACITSQGHV 4537
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 165/359 (45%), Gaps = 35/359 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKKA 115
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S + + I
Sbjct: 24 VVLVSAG--ASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81
Query: 116 GAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G HT +ED + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 82 ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ + + G Q GQLG GT T+DS + P+ I + G +
Sbjct: 142 --LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQSFEGVCVKM 185
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+A G HT AV G +Y WG+G YG LG ++ D VP +V + ++ +I+ G
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMV----LIACG 241
Query: 294 SVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
++ + G LY +G K +GD D + P L L ++ + G H +
Sbjct: 242 WRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALT 301
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D WG ++G++G G P +V E V VACG+ H+L ++ NV
Sbjct: 302 SDGKLYGWGWNKFGQVGVG--DTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNV 358
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 160
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 161 LGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + E + ACG T+ +SS S+ G +YGQLGHG
Sbjct: 221 RLVPEKVSSVEGEKMVLIACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 269
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL +I +++ G HT+A+ S G +Y WG+ +G++G + D
Sbjct: 270 -----FEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDD 324
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P +V + V A ++ G ++ ++ WG+
Sbjct: 325 HCFPVQVKFPEDQKV----AQVACGWRHTLAFTEKKNVFSWGR 363
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
D + C H +A + ++WGR GQLGHG+ + R++P ++ LS
Sbjct: 336 DQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 285 PPEAVI--SAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPL--MDLSGWNLR 334
PP AV+ SAG+ +S G L WG+ ++ + +D + P L D + +
Sbjct: 20 PPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGIT 79
Query: 335 CMDSGNMH--HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + + SWG +G LG+G P+ V L+G+ + +ACG
Sbjct: 80 SVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGIKIKQIACG 137
Query: 393 YGHSLVI 399
H L +
Sbjct: 138 DSHCLAV 144
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 1620 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 1679
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 1680 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 1785
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 1786 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 1845
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 1846 ----AIATGSLHCVCCTEDGEVYTWG 1867
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 620 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 679
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 680 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 739
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 740 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 788
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 789 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 845
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 846 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 875
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 563 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 617
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 618 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 677
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 678 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 730
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 731 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 781
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 782 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 837
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 838 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 895
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 896 VQGLEGQKITRVACGSSHSV 915
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 1605 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 1662
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 1663 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1708
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 1709 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 1766
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 1767 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1825
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 1826 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 1855
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 537 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 590
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 591 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 650
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 651 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 694
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 695 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 750
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 751 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 810
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 811 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 868
Query: 403 TNV 405
V
Sbjct: 869 GQV 871
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 1591 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 1650
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 1651 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 1708
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 1709 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 1754
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 1755 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 1810
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 1811 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1870
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 1871 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P + L IR +A G S H A+ G YTWG E G+LGHGD + +P
Sbjct: 679 NCDKPRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 736
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T++G ++G G+LG G P + L
Sbjct: 737 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 796
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
+ V CGA F++ L+ + + G Y +LGHG+D
Sbjct: 797 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 854
Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
DS A+ +P + L G+ I +VACG++H+
Sbjct: 855 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 914
Query: 242 VA 243
VA
Sbjct: 915 VA 916
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 1772 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1828
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 1829 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1888
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
L +V ACG+ T+ S+ + AS L A +P +Y L
Sbjct: 1889 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 1931
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 835 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 892
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 893 PTLVQGLEGQKITRVACGSSHSVAWT 918
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 533 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 589
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 590 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 646
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 704
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 276 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 335
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 336 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 441
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 442 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 501
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 502 ----AIATGSLHCVCCTEDGEVYTWG 523
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 261 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 318
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 319 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 364
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 365 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 422
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 423 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 481
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 482 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 511
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 247 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 306
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 307 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 364
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 365 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 410
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 411 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 466
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 526
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 527 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 563
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 428 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 484
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 485 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 544
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
L +V ACG+ T+ S+ + AS L A +P +Y L
Sbjct: 545 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 587
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3774 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3833
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3834 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3939
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3940 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3999
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4000 ----AIATGSLHCVCCTEDGEVYTWG 4021
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3759 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3816
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3817 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3862
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 3863 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3920
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3921 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3979
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3980 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4009
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3745 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3804
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 3805 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3862
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 3863 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 3908
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 3909 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 3964
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3965 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4024
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4025 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 145/356 (40%), Gaps = 53/356 (14%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A + + ++WG N++ QLG + P+ LS + + G VT +G
Sbjct: 2705 AATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2764
Query: 132 LAFG----WNKHGQLGSGSIRNEIEPSPVRCLVSEVT---ATACGADFTVWLSSVEGASI 184
A G W G LG S I + L S V A G T + V+G +
Sbjct: 2765 YACGEATKWPAWG-LGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGF-XPVDG-KV 2821
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G G+LGH + PR I AL + I +ACG++H+ A+
Sbjct: 2822 FSWGEGDDGKLGHFSR------------------MPRLIEALKTKRIRDIACGSSHSAAL 2863
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--G 302
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTD 2919
Query: 303 GGQLYMWGKLKNNGDDWM-----------YPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
G ++ G +GD W P+ + L+G + ++ G S
Sbjct: 2920 EGLVFSLG----DGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2975
Query: 352 I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC-GYGHSLVIVDRTNV 405
+ +WG Y LG+G P+ V+ L G +++ +C G H L + D V
Sbjct: 2976 VWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQV 3029
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2839 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2896
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE- 162
L +++ + G + T+ +T++G + G ++G G ++ P + L +
Sbjct: 2897 LLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQG 2956
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V CGA F++ L+ + + G Y +LGHG+D +P+
Sbjct: 2957 VCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVR--------------KPQV 3000
Query: 223 IAALAGETIVKVAC-GTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+ L G+ IV +C G H +AV G VY WG +G+ G+
Sbjct: 3001 VEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGN 3042
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 156/368 (42%), Gaps = 45/368 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ---LGHGDKIQRDRPTI 103
P+ L +++ VA G S AV VEG+ Y G + LG
Sbjct: 2734 PSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGX 2791
Query: 104 VSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
++ LS Y +KK +G S T DG ++G G+LG S P + L +
Sbjct: 2792 ITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALKT 2847
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ + ACG+ + L+S + GL +YG+LGHG DN Q +P
Sbjct: 2848 KRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT-------------TQLKP 2891
Query: 221 RAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
+ + L G +++VACG+ T+A+ +G V++ G G ++G E K +P+ ++
Sbjct: 2892 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIER 2951
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGW 331
V I G+ S G ++ WGK +G D KP + L G
Sbjct: 2952 LNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK 3007
Query: 332 NL-RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ C SG +H DS + +WG +G+ G G + P V LEG + V
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRV 3065
Query: 390 ACGYGHSL 397
ACG HS+
Sbjct: 3066 ACGSSHSV 3073
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3926 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3982
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3983 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4042
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4043 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4083
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG-AGRSHTV 123
C + +A+ G +TWG+ + +LGHG + +P +V L KI +G H +
Sbjct: 2962 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCL 3021
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A
Sbjct: 3022 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVA 3081
Query: 183 S 183
+
Sbjct: 3082 T 3082
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 59 RFVAAGCV-SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ VA C + HC+AV G+ Y WG N+ GQ G+G +PT+V L KI +
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3067
Query: 118 GRSHTVVVT 126
G SH+V T
Sbjct: 3068 GSSHSVAWT 3076
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4028
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4134
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4135 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4195 ----AIATGSLHCVCCTEDGEVYTWG 4216
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3020 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3079
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3080 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3139
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3140 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3188
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3189 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3245
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3246 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3275
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2963 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3017
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3018 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3077
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3078 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3130
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3131 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3181
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3182 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3237
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3238 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3295
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3296 VQGLEGQKITRVACGSSHSV 3315
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2937 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2990
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2991 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3050
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3051 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3094
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3095 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3150
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3151 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3210
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3211 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3268
Query: 403 TNV 405
V
Sbjct: 3269 GQV 3271
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
E+ P + ++ I KVA G H +A+ S+G VY+WG G+LGH + P
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 4024
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
R ++ + V+ ++AG +S+C G LY WGK + ++ +D + PK +
Sbjct: 4025 RVIESLRGIEVVD----VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4080
Query: 327 DLSGWNLRCMD----SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
L G R +D SG+ D + SWG YG+LG G G +P K+D L
Sbjct: 4081 ALQGH--RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSL 4136
Query: 382 EGMHVISVACGYGHSLVI 399
G+ V+ V CG S+ +
Sbjct: 4137 TGLGVVKVECGSQFSVAL 4154
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3083 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3140
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3141 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3200
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3201 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3258
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3259 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4121 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4177
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4178 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4237
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4238 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4278
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3235 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3292
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3293 PTLVQGLEGQKITRVACGSSHSVAWT 3318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2933 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2989
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2990 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3046
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3104
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4007 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4066
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4067 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4172
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4173 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4232
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4233 ----AIATGSLHCVCCTEDGEVYTWG 4254
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3005 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3064
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3065 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3124
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3125 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3173
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3174 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3230
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3231 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3260
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2948 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3002
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3003 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3062
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3063 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3115
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3116 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3166
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3167 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3222
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3223 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3280
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3281 VQGLEGQKITRVACGSSHSV 3300
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3992 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4049
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4050 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4095
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4096 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4153
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4154 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4212
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4213 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4242
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2922 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2975
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2976 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3035
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3036 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3079
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3080 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3135
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3136 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3195
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3196 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3253
Query: 403 TNV 405
V
Sbjct: 3254 GQV 3256
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 454 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 513
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 514 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 573
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 574 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 625
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 626 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 679
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 680 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 712
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3978 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4038 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4095
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4096 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4141
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4142 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4197
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4198 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4257
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4258 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 503 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 548
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 549 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 606
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 664
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 665 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 708
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3068 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3125
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3126 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3185
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3186 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3243
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3244 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4159 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4215
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4216 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4275
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4276 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4316
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3220 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3277
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3278 PTLVQGLEGQKITRVACGSSHSVAWT 3303
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 479
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 540 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 596
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 597 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 650
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 513 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 572
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 679
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 680 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 732
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 733 LPGLDTKHIVGIACGPAQSFA 753
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4037 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4096
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4097 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4156
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4157 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4202
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4203 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4262
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4263 ----AIATGSLHCVCCTEDGEVYTWG 4284
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3035 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3094
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3095 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3154
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3155 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3203
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3204 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3260
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3261 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3290
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2978 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3032
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3033 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3092
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3093 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3145
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3146 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3196
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3197 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3252
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3253 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3310
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3311 VQGLEGQKITRVACGSSHSV 3330
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4022 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4079
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4080 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4125
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q ++V+ + +G + C ++ W
Sbjct: 4126 GKGRYGRLGHSDSEDQLKPKLVEALQGHHVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4183
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4184 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4242
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4243 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4272
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2952 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3005
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 3006 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3065
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3066 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3109
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3110 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3165
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3166 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3225
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3226 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3283
Query: 403 TNV 405
V
Sbjct: 3284 GQV 3286
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4008 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4067
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4068 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4125
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4126 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHHVVDVACGSGDAQTLCLT 4171
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4172 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4227
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4228 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4287
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4288 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3098 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3155
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3156 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3215
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3216 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3273
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3274 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4189 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4245
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4246 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4305
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4306 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4346
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3250 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3307
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3308 PTLVQGLEGQKITRVACGSSHSVAWT 3333
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPVLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4149
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q ++V+ + +G + C ++ W
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHHVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4265
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 403 TNV 405
V
Sbjct: 3277 GQV 3279
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4118
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4119 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHHVVDVACGSGDAQTLCLT 4164
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4220
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPVLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4265
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 403 TNV 405
V
Sbjct: 3277 GQV 3279
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4118
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4119 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4164
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4220
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4015 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4074
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 4075 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + + G YG+LG G + P I
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI--------------PMKID 4180
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G + KV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4181 SLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4240
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4241 ----AIATGSLHCVCCTEDGEVYTWG 4262
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L ++ VA H +A+ V+G+
Sbjct: 2997 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3054
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G ++G ++
Sbjct: 3055 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3114
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++ P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 3115 GRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 3175 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3220
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3221 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3268
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 172/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2956 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRL 3010
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3011 GLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3070
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + + GL +YG+LGHG DN
Sbjct: 3071 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNA---- 3123
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q RP+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3124 ---------TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3175 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3230
Query: 321 YPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP M L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3231 VRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3288
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3289 VQGLEGQKITRVACGSSHSV 3308
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 23/271 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L I +AA H +A+ G ++WG + G+LGHGD + PT++
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMI 527
Query: 105 SELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+ + + + G +++ V+T DG +G +G+LG GS ++ P V L
Sbjct: 528 AAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALK 587
Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V ACG+ L+ E + + G YG+LG G + T
Sbjct: 588 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 633
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + L IVKV CG+ +VA+ G VYTWG G RLGH + P+ +D Q
Sbjct: 634 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQ 693
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ ++ GS + G+++ WG
Sbjct: 694 GKKVVD----VAVGSTHCLALTDDGEVHSWG 720
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 4000 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4057
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4058 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4103
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD Q + V+ + +G + C ++ W
Sbjct: 4104 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4161
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4220
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4221 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4248
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2943 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 3000
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG SG+I + + + V + A G + L +V+G + + G
Sbjct: 3001 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 3058
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3059 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITSSG 3104
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3105 ELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3160
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3161 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3220
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3221 FRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3264
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + I+K +G H + ++ +
Sbjct: 3986 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE 4045
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4046 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTW 4103
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ VACG+ T+ +
Sbjct: 4104 GKGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLT 4149
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P ++D V + GS S G
Sbjct: 4150 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV----TKVECGSQFSVALTKSGA 4205
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4265
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4266 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4302
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG D Y + P IAA AG+ +V +ACG+ ++ + G
Sbjct: 511 GRLGHG-DATYLEE-------------PTMIAAFNGKQAGKHVVHIACGSTYSAVITIDG 556
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +D+ P V + V+ + +G + GQ++
Sbjct: 557 ELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVV--DVACGSGDAQTLAVTENGQVWS 614
Query: 309 W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
W GKL G D PK + L ++ + G+ + D +WG
Sbjct: 615 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 674
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV-----GERLDQLDVYD 416
LG+G + PK +D L+G V+ VA G H L + D V ++L D
Sbjct: 675 LGHG--TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLS 732
Query: 417 GK 418
K
Sbjct: 733 NK 734
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G +TWG+ G+LGHGD + +P +V
Sbjct: 4070 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4127
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4128 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV 4187
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
T CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4188 TKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4245
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4246 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G Y+WG E G+LGHGD + RP +V
Sbjct: 3076 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKV 3133
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3134 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3193
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3194 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVG 3251
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3252 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + V G S VA+ G YTWG+ + +LGHG RP V
Sbjct: 4176 PMKIDSLTGLGVTKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 4233
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L K+ G H V TEDG +G N GQLG G+ P V L ++
Sbjct: 4234 LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4293
Query: 166 TACGADFTV-WLSS 178
ACG+ T+ W +S
Sbjct: 4294 VACGSAHTLAWSTS 4307
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3228 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3285
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3286 PTLVQGLEGQKITRVACGSSHSVAWT 3311
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 44/261 (16%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAVGRRKGAL----DGNL-----------VS 46
LE M+ GK+ G ++ CGST + AV G L GN +
Sbjct: 521 LEEPTMIAAFNGKQAGKHVVHIACGST-YSAVITIDGELYTWGRGNYGRLGHGSSEDQTT 579
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P +V +
Sbjct: 580 PMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK 639
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L I K G +V +T+DG +G + +LG G+ + VR
Sbjct: 640 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH------VR--------- 684
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY----EAQPRPRA 222
F L +++G +++ + L D E ++ S+ KL + + +P+A
Sbjct: 685 -----FPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKA 739
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV ++CG + A
Sbjct: 740 LPGL--KHIVGISCGPGQSFA 758
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4265
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 403 TNV 405
V
Sbjct: 3277 GQV 3279
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4118
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4119 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4164
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4220
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 376 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 435
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 436 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 541
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 542 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 601
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 602 ----AIATGSLHCVCCTEDGEVYTWG 623
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 360
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 361 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 418
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 419 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 464
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 465 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 522
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 581
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 582 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 611
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 347 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 406
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 407 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 464
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 465 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 510
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 511 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 566
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 626
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 627 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 663
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 528 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 584
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 585 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 644
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
L +V ACG+ T+ S+ + AS L A +P +Y L
Sbjct: 645 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 687
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SPT L + V I+ VA HC+A+ EG Y+WG E G+LGHG + DRP ++
Sbjct: 3665 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 3724
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3725 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PTKID 3830
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3831 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3890
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 3891 ----AIATGSLHCVCCTEDGEVYTWG 3912
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2665 GLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2724
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2725 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2784
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2785 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV----------- 2833
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2834 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2890
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2891 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2920
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2608 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 2662
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2663 GLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2722
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 2723 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 2775
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2776 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ VP+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2827 GSEGCNVPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2882
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 2883 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 2940
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 2941 VQGLEGQKITRVACGSSHSV 2960
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3650 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3707
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG+ + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3708 KLGHGSRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3753
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 3754 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3811
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3812 YGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3870
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3871 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3900
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 165 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 224
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P +S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 225 EEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 284
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 285 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 336
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 337 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 390
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 391 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 423
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 159/365 (43%), Gaps = 47/365 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2582 IRKKAAGLES----TATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2635
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACG 169
G VT +G A G +G+LG G + + P P + +V +V + G
Sbjct: 2636 AGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGG 2694
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T +V+G + + G G+LGH + + +PR I AL +
Sbjct: 2695 RHATAL--TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTK 2737
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I +ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+
Sbjct: 2738 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ---- 2793
Query: 290 ISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNM 341
++ GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 2794 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2853
Query: 342 HHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
S + +WG Y LG+G P+ V+ L G ++ VA G H L +
Sbjct: 2854 FSLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 2911
Query: 401 DRTNV 405
D V
Sbjct: 2912 DSGQV 2916
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3636 FAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3695
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG GS P + L EV A G + +++ +
Sbjct: 3696 GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3753
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 3754 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 3799
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 3800 DDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVK----VECGSQFSVALTKSGA 3855
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3856 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3915
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3916 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+AI+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 214 GRLGHG---------DTVPLE-----EPKAISAFSGKQAGKHVVHIACGSTYSAAITAEG 259
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 260 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 317
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 375
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 376 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 419
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 3720 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 3777
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P+ + L V
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGV 3837
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 3838 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3895
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 3896 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2728 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2785
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2786 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2845
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2846 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 2903
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 2904 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V PT++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3817 RGGSDGCKV-PTKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3873
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3874 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3933
Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
L +V ACG+ T+ W +S
Sbjct: 3934 AALQGKKVNRVACGSAHTLAWSTS 3957
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2880 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2937
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2938 PTLVQGLEGQKITRVACGSSHSVAWT 2963
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 190
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 251 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 307
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 308 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 361
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K + +GK+ G ++ CGST A+ GR + P
Sbjct: 224 LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 283
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 390
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 391 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 443
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 444 LPGLDTKHIVGIACGPAQSFA 464
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G T + +K V+ WG +LG + VP + NV+
Sbjct: 2578 SGSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2634
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2635 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVH 2691
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2749
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3723 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3782
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3783 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3888
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3889 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3948
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 3949 ----AIATGSLHCVCCTEDGEVYTWG 3970
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2723 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2782
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2783 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2842
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2843 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 2891
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2892 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2948
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2949 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2978
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2666 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 2720
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2721 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2780
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 2781 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 2833
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2834 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2884
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2885 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2940
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 2941 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 2998
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 2999 VQGLEGQKITRVACGSSHSV 3018
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3708 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3765
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3766 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3811
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 3812 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3869
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3870 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3928
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3929 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3958
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2640 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2693
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2694 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2753
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 2754 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2797
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 2798 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2853
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 2854 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2913
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 2914 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 2971
Query: 403 TNV 405
V
Sbjct: 2972 GQV 2974
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3694 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3753
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 3754 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3811
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 3812 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 3857
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 3858 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 3913
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3914 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3973
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3974 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2786 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2843
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2844 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2903
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2904 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 2961
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 2962 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3875 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3931
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3932 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3991
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 3992 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4032
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 77/195 (39%), Gaps = 49/195 (25%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + LA IVK+A ++ H +A+ + G VY+WG G GRLGH + P+ +
Sbjct: 439 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 498
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
F I+ GS S+ G+LY WG+
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR-------------------------- 532
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
GN YG LG+G + A+P V L+G+ VI VACG G +
Sbjct: 533 -GN------------------YGRLGHG--SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 571
Query: 398 VIVDRTNVGERLDQL 412
+ N RL L
Sbjct: 572 TLAVTENETTRLSVL 586
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 480 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 525
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRV 275
+YTWG G YGRLGH +DE +P V
Sbjct: 526 ELYTWGRGNYGRLGHGSSEDEAIPMLV 552
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 59/275 (21%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 431 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 490
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 491 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 550
Query: 155 PVRCLVS-EVTATACGA--------------DFTVWLSSVEGASILNAGLP--QYGQLGH 197
V L +V ACG+ +V SV G ++ + +Y QLG
Sbjct: 551 LVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESFRYNQLGV 610
Query: 198 GT------------DNEYN----TKDSSVK---LAYEA-----QPRP-----RAIAALA- 227
G D ++ T+D ++ + +EA P P +A+ +
Sbjct: 611 GCRCRQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEAGRPGCVPTPVSSQKQALGYIVC 670
Query: 228 --------GETIVKVACGTNHTVAVDSKGYVYTWG 254
G+ ++ VA G+ H +A+ V++WG
Sbjct: 671 GGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSWG 705
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2938 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2995
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2996 PTLVQGLEGQKITRVACGSSHSVAWT 3021
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2636 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2692
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2693 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2749
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2807
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4058 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4117
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4118 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4223
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4224 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4283
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4284 ----AIATGSLHCVCCTEDGEVYTWG 4305
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4043 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4100
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4101 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4146
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4147 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4204
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4205 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4263
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4264 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4293
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4029 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4088
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4089 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4146
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4147 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4192
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4193 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4248
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4249 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4308
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4309 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4210 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4266
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4267 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4326
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4327 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4367
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SPT L + V I+ VA HC+A+ EG Y+WG E G+LGHG + DRP ++
Sbjct: 3967 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 4026
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4027 SLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4132
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4133 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4192
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4193 ----AIATGSLHCVCCTEDGEVYTWG 4214
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2967 GISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3026
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3027 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3086
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3087 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV----------- 3135
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3136 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3192
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3193 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3222
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2910 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 2964
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2965 GLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3024
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3025 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3077
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3078 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ VP+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3129 GSEGCNVPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3184
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3185 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3242
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3243 VQGLEGQKITRVACGSSHSV 3262
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3952 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4009
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG+ + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4010 KLGHGSRSPCD--------------RPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTW 4055
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4056 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4113
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4114 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4172
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4173 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4202
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 159/365 (43%), Gaps = 47/365 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2884 IRKKAAGLES----TATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2937
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACG 169
G VT +G A G +G+LG G I + P P + +V +V + G
Sbjct: 2938 AGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYMVKKVAVHSGG 2996
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T +V+G + + G G+LGH + + +PR I AL +
Sbjct: 2997 RHATAL--TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTK 3039
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I +ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+
Sbjct: 3040 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ---- 3095
Query: 290 ISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNM 341
++ GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3096 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 3155
Query: 342 HHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
S + +WG Y LG+G P+ V+ L G ++ VA G H L +
Sbjct: 3156 FSLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3213
Query: 401 DRTNV 405
D V
Sbjct: 3214 DSGQV 3218
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 407 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 466
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEP 153
+ P ++S S + + G +++ +T +G +G + +L G S NEI
Sbjct: 467 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILI 526
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ +CG F L+ E + + G YG+LG G + T
Sbjct: 527 MISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKT-------- 578
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 579 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 632
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 633 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 665
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3938 FAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3997
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG GS P + L EV A G + +++ +
Sbjct: 3998 GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTA--AGDLYTW 4055
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4056 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4101
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4102 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 4157
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4158 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4217
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4218 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4022 PRVIESLRGVEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4079
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4139
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4140 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4197
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4198 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3030 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3087
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3088 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 3147
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3148 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3205
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3206 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + LA IVK+A ++ H +A+ + G VY+WG G GRLGH + P+ +
Sbjct: 415 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 474
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWN- 332
F I+ GS S+ G+LY WG+ ++G M + L+ +SG +
Sbjct: 475 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMN-EILIMISGLDR 533
Query: 333 ---------LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+R + + + SWG YG+LG G G PK ++ L+
Sbjct: 534 QKFIYKSCGIRFAQTLAFYE----NGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQD 587
Query: 384 MHVISVACGYGHSLVI 399
+ V+ V CG S+ +
Sbjct: 588 LDVVKVRCGSQFSIAL 603
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 456 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 501
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G Y RL H + + R + I + GQ++
Sbjct: 502 ELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFA--QTLAFYENGQVWS 559
Query: 309 WG-----KLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
WG KL G D PK L DL +RC ++ + D SWG
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 617
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 618 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 661
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4119 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4175
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4176 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4235
Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
L +V ACG+ T+ W +S
Sbjct: 4236 AALQGKKVNRVACGSAHTLAWSTS 4259
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3182 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3239
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3240 PTLVQGLEGQKITRVACGSSHSVAWT 3265
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 43/224 (19%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAG 118
V C S + A+ EG YTWGR +L HG + ++S L K+ K G
Sbjct: 485 VHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIR 544
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
+ T+ E+G ++G +G+LG G P + L +V CG+ F++ L+
Sbjct: 545 FAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYN--------------------------TKDSSVK 211
+ + + G +LGHGT+ T+DS V
Sbjct: 605 --KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 662
Query: 212 ------------LAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+P P A+ L + IV +ACG + A
Sbjct: 663 SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 706
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 587 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 646
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 647 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G T + +K V+ WG +LG + VP + NV+
Sbjct: 2880 SGSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2936
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2937 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVH 2993
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3051
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4033 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4092
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4093 SLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4198
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4199 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4258
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4259 ----AIATGSLHCVCCTEDGEVYTWG 4280
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3200 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3256
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3257 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3286
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 171/385 (44%), Gaps = 43/385 (11%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
GS C D VG + + P+ L +++ VA G S AV VEG+ Y G
Sbjct: 2972 GSLCCDGVGLSQ------IKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEA 3023
Query: 86 ERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQL 142
G+LG G P V+ LS Y +KK +G H +T DG ++G G+L
Sbjct: 3024 TNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3083
Query: 143 GSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
G S N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3084 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DN 3140
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYG 259
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G
Sbjct: 3141 T-------------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNN 315
+LG + +P+ ++ V I G+ S G ++ WGK +
Sbjct: 3188 KLGRGGSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Query: 316 GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS 372
G D KP + L G + + G +H D+ + +WG +G+ G G +
Sbjct: 3244 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVN 3301
Query: 373 AMPKKVDILEGMHVISVACGYGHSL 397
P V LEG + VACG HS+
Sbjct: 3302 RKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 160/372 (43%), Gaps = 33/372 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4018 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4075
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4076 KLGHGNRSPCD--------------RPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTW 4121
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4122 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4179
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4180 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4238
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEE 426
P++V L+G VI++A G H + T GE D +G+
Sbjct: 4239 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---TEDGEVYTWGDNDEGQLGDGTTNA 4294
Query: 427 IDRNSTVPPKKG 438
I R VP +G
Sbjct: 4295 IQRPRLVPALQG 4306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4004 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4063
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L E+ A G + +++ +
Sbjct: 4064 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTA--AGDLYTW 4121
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4122 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4167
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4168 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4223
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4224 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4284 EGQLGDG--TTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE VP V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4185 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4241
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4242 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4301
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4302 PALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPTQVPMEYN 4342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAVPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 166/373 (44%), Gaps = 68/373 (18%)
Query: 27 STCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+T + A+GR G +D +V PT L + V I+ VA HC+A+ EG Y+WG
Sbjct: 3950 ATGYGALGRLGTGGVDSVMV-PTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4008
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ G+LGHG++I DRP ++ L +I G H+ ++ G +G ++G+LG G
Sbjct: 4009 DDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHG 4068
Query: 146 SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
++++P+ V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4069 DSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCK 4128
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
P I +LAG +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4129 V--------------PMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
PR+V Q ++ I+ GS++ + G++Y WG + D+
Sbjct: 4175 TDDHVRRPRKVSALQGKKIVS----IATGSLHCVACSDKGEVYTWG----DNDE------ 4220
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
G+LG G + S P+ V L+G
Sbjct: 4221 -----------------------------------GQLGDGTTHAQQS--PRLVHALQGK 4243
Query: 385 HVISVACGYGHSL 397
++ VACG H+L
Sbjct: 4244 NITRVACGSAHTL 4256
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 152/342 (44%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P LS + + G VT DG A
Sbjct: 3891 DGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG+G + + + P+ ++ + + A G + LSS EG + + G
Sbjct: 3951 TGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4008
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG Y+ RP+ I AL G IV +ACG +H+ A+ S G++
Sbjct: 4009 DDGKLGHGNRITYD--------------RPKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + D+ P V Q V+ + +G + C ++ W
Sbjct: 4055 YTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4112
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S + +WG Y LG
Sbjct: 4113 DGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4172
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G ++S+A G H + D+ V
Sbjct: 4173 HG--TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEV 4212
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGR 78
G+L CG + R G D N V + P + I+ VA H +A+ +G+
Sbjct: 2974 GKLYACG----EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGK 3029
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
++WG E G+LGHG+++ D+P ++ L +I+ G H+ + +G +G +
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3089
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
+G+LG G ++P V LV + V ACG+ ++ E S+ + G +G+LG
Sbjct: 3090 YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGR 3149
Query: 198 -GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G+D Y+ P + L G +V+V CG ++A+ G V+TWG G
Sbjct: 3150 GGSDGCYS---------------PLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3194
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH P V+ + V+ ++ G+++ GQ+Y WG
Sbjct: 3195 DYFRLGHGNDHHVRRPTLVEGLRGKKVVH----VAVGALHCLAVTDAGQVYAWG 3244
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 2925 YVWGLNDKDQLGGLKGSKIKL--PVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 2982
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP P+ L + + A G + L+ + + + G + G+
Sbjct: 2983 TNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3040
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + +PR I AL + I +ACG+ H+ A+ S G +YTWG
Sbjct: 3041 LGHGNRVSLD--------------KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWG 3086
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + P+ VD V+ ++ GS ++ A G +Y W
Sbjct: 3087 LGEYGRLGHGDTTTHLKPKLVDALVGQRVIQ----VACGSRDAQTMALTEDGSVYSWGDG 3142
Query: 310 --GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y P P+ L+G + ++ G + +WG Y LG+G
Sbjct: 3143 DFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3202
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
P V+ L G V+ VA G H L + D
Sbjct: 3203 --NDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD 3236
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P + LS+Y IKK +G H + +T+D
Sbjct: 2968 FVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQD 3027
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 3028 GKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIAS--NGELYTW 3085
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG D++ L +P+ + AL G+ +++VACG+ T+A+
Sbjct: 3086 GLGEYGRLGHG--------DTTTHL------KPKLVDALVGQRVIQVACGSRDAQTMALT 3131
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G VY+WG G +G+LG + P VD V+ E G+ S G+
Sbjct: 3132 EDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVE----CGAQFSLALTKYGE 3187
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQ 358
++ WGK +G+D +P + L G + + G +H D+ + +WG
Sbjct: 3188 VWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDND 3247
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+G+ G G + P V LE V VACG HS+ V+ D+ +G +
Sbjct: 3248 HGQQGNG--STMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTLGNQ 3297
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 19/244 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G Y+WG + G+LGHGD D P ++ LS + G +++ ++
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G L +G +G+LG G + P+ V L VT ACG+ + L + +
Sbjct: 572 GELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSW 631
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G + P+ + L + +VKV CG + A+ +
Sbjct: 632 GDGDYGKLGRG--------------GSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VYTWG G + RLGH ++ P+ V+ + V +S G+++ +Y
Sbjct: 678 GEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRD----LSVGNLHILAITEDQLVY 733
Query: 308 MWGK 311
WG+
Sbjct: 734 GWGR 737
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I +A G H A+ G YTWG+ G+LGHGD + +PT+V+
Sbjct: 4024 PKLIEALLGTEIVDIACG--GHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTA 4081
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4082 LQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4141
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
CG+ F+V L+ ++ G Y +LGHGTD+ L
Sbjct: 4142 VKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATG 4199
Query: 213 ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
AQ PR + AL G+ I +VACG+ HT+A
Sbjct: 4200 SLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+++ A + +V++A + H +A+ +KG VY+WG G GRLGH + P+ ++V
Sbjct: 491 PQSVYGFADD-VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEV 549
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNG--DDWMYPKPLMDLSGW 331
V I+ GS S+ + G+L WG+ +G DD P + L+G
Sbjct: 550 LSDRTV----TYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGH 605
Query: 332 NLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ + SG+ +S + SWG YG+LG G G S +PK VD L +V+
Sbjct: 606 TVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRG--GSDGSKLPKIVDKLLDQNVVK 663
Query: 389 VACG 392
V CG
Sbjct: 664 VFCG 667
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L + ++A G S + A+ G TWGR G+LGHG PT+V+
Sbjct: 544 PQVIEVLSDRTVTYIACG--STYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTA 601
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G+G S T+ VT G ++G +G+LG G P V L+ + V
Sbjct: 602 LNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNV 661
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG F+ L++ + G + +LGHG NE + + P+ +
Sbjct: 662 VKVFCGGQFSAALTA--HGEVYTWGKGDHYRLGHG--NEEHVR------------FPKLV 705
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
L + + ++ G H +A+ VY WG
Sbjct: 706 EGLRNKKVRDLSVGNLHILAITEDQLVYGWG 736
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D V C A+ G YTWG+ + +LGHG++ P +V L K++
Sbjct: 657 LDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDL 716
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH 139
G H + +TED L +GW ++
Sbjct: 717 SVGNLHILAITED--QLVYGWGRN 738
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GELL G + GR + ++ PT + L G + VA G + V G
Sbjct: 572 GELLTWGRGSY---GRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIV 628
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LG G P IV +L + K G + +T G +G H
Sbjct: 629 FSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDH 688
Query: 140 GQLGSGS 146
+LG G+
Sbjct: 689 YRLGHGN 695
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAG 293
T++ D G +Y WG G+LG E +P LP E++ ++ G
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-----------LPCESLSALRPIQLAGG 3935
Query: 294 SVNSSCTAGGGQLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNLR--CMDSGNMHHF- 344
G++Y G+L G D M P L + ++ ++SG H
Sbjct: 3936 EQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLA 3995
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ ++ SWG G+LG+G + + PK ++ L G ++ +ACG HS I
Sbjct: 3996 LSSEGHVYSWGEGDDGKLGHG--NRITYDRPKLIEALLGTEIVDIACGGHHSAAI 4048
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 298 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 357
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 358 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 463
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 464 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 523
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 524 ----AIATGSLHCVCCTEDGEVYTWG 545
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 282
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 283 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 340
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 341 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 386
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 387 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 444
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 503
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 504 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 533
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 269 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 328
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 329 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 386
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 387 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 432
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 433 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 488
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 489 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 548
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 549 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 585
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 450 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 506
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 507 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 566
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 567 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 607
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4092 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3032 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3091
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3092 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3151
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3152 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3200
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3201 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3257
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3258 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3287
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2975 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3029
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3030 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3089
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3090 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3142
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3143 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3193
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3194 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3249
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3250 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3307
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3308 VQGLEGQKITRVACGSSHSV 3327
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4120
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4121 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4267
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2949 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3002
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 3003 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3062
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3063 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3106
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3107 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3162
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3163 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3222
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3223 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3280
Query: 403 TNV 405
V
Sbjct: 3281 GQV 3283
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 422 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 481
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 593
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 594 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 647
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 648 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 680
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4222
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4283 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 471 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 516
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 517 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 574
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 632
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 633 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3095 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3152
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3153 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3212
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3213 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3270
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3271 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4301 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4341
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3247 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3304
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3305 PTLVQGLEGQKITRVACGSSHSVAWT 3330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 447
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 508 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 564
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 618
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 647
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 648 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 700
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 701 LPGLDTKHIVGIACGPAQSFA 721
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2945 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 3001
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 3002 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3058
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3116
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3779 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3838
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3839 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3944
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3945 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4004
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4005 ----AIATGSLHCVCCTEDGEVYTWG 4026
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2779 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2838
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2839 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2898
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2899 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 2947
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2948 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3004
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3005 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3034
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2722 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 2776
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2777 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2836
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 2837 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 2889
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2890 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2940
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2941 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2996
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3054
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3055 VQGLEGQKITRVACGSSHSV 3074
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G + VT DG A G+
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3764 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3821
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3822 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3867
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 3868 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3925
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3926 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3984
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3985 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4014
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2696 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2749
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2809
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 2810 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2853
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 2854 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2909
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2969
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 2970 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3027
Query: 403 TNV 405
V
Sbjct: 3028 GQV 3030
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L ++ +AA H +A+ G Y+WG + +LGHGD +
Sbjct: 453 AYNSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPL 512
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 513 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 572
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 573 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 624
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 625 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 678
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 679 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 711
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
+AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3750 LAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3809
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 3810 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3867
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 3868 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 3913
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 3914 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 3969
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4030 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 220 PRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +DE +P V
Sbjct: 515 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 574
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPK---PLM 326
+ V+ + +G + GQ++ W GKL G D PK L
Sbjct: 575 AGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 632
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
DL +RC ++ + D SWG LG+G ++ PK ++ L+G V
Sbjct: 633 DLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEGLQGKKV 688
Query: 387 ISVACGYGHSLVIVDRTNV 405
I VA G H L + + + V
Sbjct: 689 IDVAAGSTHCLALTEDSEV 707
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2842 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2899
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2900 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2959
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2960 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3017
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3018 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3931 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3987
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3988 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4047
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4048 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4088
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2994 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3051
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 44/274 (16%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 512 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 571
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 678
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 679 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 731
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ L + IV +ACG + A S Y W G
Sbjct: 732 LPGLDTKHIVGIACGPAQSSAGSSX---YEWSMG 762
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2692 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2748
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2749 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2805
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2863
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4028 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4087
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4088 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4147
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4148 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4193
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4194 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4253
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C + G++Y WG
Sbjct: 4254 ----AIATGSLHCVCCSEDGEVYTWG 4275
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3026 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3085
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3086 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3145
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3146 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3194
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3195 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3251
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3252 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3281
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2969 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3023
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3024 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3083
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3084 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3136
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3137 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3187
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3188 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3243
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3244 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3301
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3302 VQGLEGQKITRVACGSSHSV 3321
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4013 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4070
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4071 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4116
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4117 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4174
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4233
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4234 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4263
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 43/359 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2943 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2996
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2997 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3056
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3057 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3100
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3101 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3156
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3157 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3216
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3217 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3273
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4000 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L +EV A G + +++ + G
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4117
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4118 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4163
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 4164 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 4219
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H + D +WG
Sbjct: 4220 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4279
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 38/286 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3951 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 4009
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 4010 TG--------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4055
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4056 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4111
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 4112 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4169
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4170 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4213
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3089 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3146
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3147 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3206
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3207 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3264
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3265 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4180 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4236
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V +EDG +G N GQLG G+ P V
Sbjct: 4237 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4296
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4297 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4337
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3241 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3298
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3299 PTLVQGLEGQKITRVACGSSHSVAWT 3324
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 673
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G +V +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4022 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4081
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4082 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4187
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4188 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4247
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4248 ----AIATGSLHCVCCTEDGEVYTWG 4269
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3022 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3081
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3082 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3141
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3142 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3190
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3191 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3247
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3248 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3277
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2965 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3019
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3020 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3079
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3080 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3132
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3133 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3183
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3184 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3239
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3240 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3297
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3298 VQGLEGQKITRVACGSSHSV 3317
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4007 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4064
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4065 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4110
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4111 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4168
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4169 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4227
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4228 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4257
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2939 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2992
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2993 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3052
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3053 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3096
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3097 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3152
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3153 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3212
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3213 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3270
Query: 403 TNV 405
V
Sbjct: 3271 GQV 3273
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3993 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4052
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4053 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4110
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4111 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4156
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4157 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4212
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4213 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4272
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4273 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3085 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3142
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3143 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3202
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3203 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3260
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3261 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4174 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4230
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4231 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4290
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4291 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4331
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3237 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3294
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3295 PTLVQGLEGQKITRVACGSSHSVAWT 3320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2935 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2991
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2992 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3048
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3106
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3918 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3977
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3978 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4083
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4084 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4143
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4144 ----AIATGSLHCVCCTEDGEVYTWG 4165
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 147/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3903 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3960
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3961 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4006
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+V Q + V+ + +G + C ++ W
Sbjct: 4007 GKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4064
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4123
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4124 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4151
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
P+ I L G+ + ++ CG ++A+ G V+TW
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 159/400 (39%), Gaps = 86/400 (21%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATALT-VDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV-------- 3154
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
+ +C + Q L D G +
Sbjct: 3155 ---IQVACGSRDAQ--------------------------TLALTDEGLV---------- 3175
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV-----IVDRTNVG 406
SWG +G+LG G G + +P+ ++ L G V + CG SL +V V
Sbjct: 3176 FSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVS 3233
Query: 407 ERLDQLDVY----DGKASSQDNEEIDRNSTVPPKKGAAKV 442
L + + D +S+ N+ NS+ P + AK+
Sbjct: 3234 FLLSPVHLLGVPSDADSSATSNKTSGANSSKPNRPSLAKI 3273
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLG 262
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 147/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3889 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3948
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 3949 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4006
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + L G +V +ACG+ T+ +
Sbjct: 4007 GKGRYGRLGHS--------DS------EDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLT 4052
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4053 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 4108
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4109 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4168
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4169 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 220 PRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P+ I+A +G+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +DE +P V
Sbjct: 539 PKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPK---PLM 326
+ V+ + +G + GQ++ W GKL G D PK L
Sbjct: 599 AGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
DL +RC ++ + D SWG LG+G ++ PK ++ L+G V
Sbjct: 657 DLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEGLQGKKV 712
Query: 387 ISVACGYGHSLVIVDRTNV 405
I VA G H L + + + V
Sbjct: 713 IDVAAGSTHCLALTEDSEV 731
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4070 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4126
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4127 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4186
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4187 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4227
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G + + CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C + G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCSEDGEVYTWG 4276
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRRKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 403 TNV 405
V
Sbjct: 3277 GQV 3279
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L +EV A G + +++ + G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4118
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4164
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H + D +WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4280
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 38/286 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 4010
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 4011 TG--------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4112
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4170
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V +EDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4338
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP +V
Sbjct: 4031 TPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 4090
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4150
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4151 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4196
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4256
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4257 ----AIATGSLHCVCCTEDGEVYTWG 4278
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3029 GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3088
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3089 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3148
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3149 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3197
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3198 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3254
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3255 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3284
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2972 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3026
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3027 GLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3086
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3087 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3139
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3140 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3190
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3191 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3246
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3247 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3304
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3305 VQGLEGQKITRVACGSSHSV 3324
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ V+ + + A G + LSS EG + + G + G
Sbjct: 4016 GAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4073
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR + +L G +V VA G H+ V + G +YTW
Sbjct: 4074 KLGHGNRSPCD--------------RPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4120 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4236
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4237 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4266
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E+ P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2956 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3013
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G L +V+G +
Sbjct: 3014 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVF 3071
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 3072 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3117
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3118 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 3173
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 3174 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3233
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3234 GDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 3280
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4002 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE 4061
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P V L EV A G + +++ +
Sbjct: 4062 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4119
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4120 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4165
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4166 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4221
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4282 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4086 PRVVESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4143
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4203
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 4204 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4261
Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D V A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3092 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3149
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3150 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3209
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3210 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3267
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3268 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4183 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + S G+L EYN
Sbjct: 4300 AALQGKKVNRVACGSAHTLAWSTSKPTST--------GKLPAQVPMEYN 4340
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3244 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3301
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3302 PTLVQGLEGQKITRVACGSSHSVAWT 3327
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDALAPQLVQGLASRNIIKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D + P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEVIPVLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 673
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + V P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4090 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C + G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCSEDGEVYTWG 4277
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4015 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4265
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 43/359 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L +EV A G + +++ + G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4119
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4120 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 4221
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H + D +WG
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4281
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4282 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 38/286 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 4011
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 4012 TG--------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4057
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4113
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4171
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4172 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V +EDG +G N GQLG G+ P V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 673
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G +V +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 157/330 (47%), Gaps = 33/330 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+TWGR E GQLG GD +D PT V L +++ G HTVV+T DG +G
Sbjct: 3 FTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDD 62
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEG-ASILNAGLPQYGQLGH 197
G+LG G + P + L ++ CG+ T ++V G + G YG+LGH
Sbjct: 63 GRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHT---AAVTGNGDLYTWGGGMYGKLGH 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + + T P+ + AL G T+ ++ACG+ HT V + G +YTWG
Sbjct: 120 GDEAGHAT--------------PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKE 165
Query: 258 YGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
G GH E + +++PR ++ V A ISA +++ G+L+ W G+
Sbjct: 166 NGVAGHGETEGHQYLPRLLESMAAKRV----AQISACGFHTAIVTDAGELFTWGEGKFGR 221
Query: 312 LKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
L + + + ++D + G R + G H V D ++G ++G+LG+
Sbjct: 222 LGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVN 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
K + P V+ L+GM V + CG+ HS+ +
Sbjct: 282 KMT--PTFVEALDGMFVSQITCGWSHSVAL 309
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 31/341 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L GV ++ +A C S H V + +G +TWGR + G+LGHGD + P +
Sbjct: 24 PTYVDALRGVGVQQIA--CGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQS 81
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L+ + + G HT VT +G+ +G +G+LG G P V LV + V
Sbjct: 82 LAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQ 141
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ T +++ ++ G + G GHG + Q PR + +
Sbjct: 142 IACGSRHTAIVTA--SGALYTWGDKENGVAGHGETEGH-------------QYLPRLLES 186
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+A + + +++ HT V G ++TWG G +GRLGH +++ P VD V
Sbjct: 187 MAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYM----VGK 242
Query: 286 PEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSG 339
+S G +++ + G+LY + G+L +N + M P + L G + + G
Sbjct: 243 KPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCG 302
Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
H + +WG+ +G+LG+G + A+P+ V+
Sbjct: 303 WSHSVALTVKGLVYTWGNGDHGKLGHGN--GRKVAVPQAVE 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N SPT + +VG R V+ C H V +GR YT+G E GQLGH D++ + PT
Sbjct: 229 NCHSPTIVDYMVGKKPRQVS--CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPT 286
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
V L + + G SH+V +T G +G HG+LG G+ R P V
Sbjct: 287 FVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+TWG G G+LG + D+ P VD + V I+ GS ++ G+++ W
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ----IACGSGHTVVLTTDGEVFTW 57
Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
G+L + + W Y P+ L+G + + G+ H V + +WG YG+L
Sbjct: 58 GRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKL 117
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQ 422
G+G + A PK+V+ L G V +ACG H+ ++ + D+ + G ++
Sbjct: 118 GHGD--EAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETE 175
Query: 423 DNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSE 457
++ + R K A++S D+ E
Sbjct: 176 GHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGE 210
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACGT T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLG ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ G+ ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGTRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGLG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG+ V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGSKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3939 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3998
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3999 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4104
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4105 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4164
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4165 ----AIATGSLHCVCCTEDGEVYTWG 4186
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2938 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2997
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2998 CDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3057
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3058 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3106
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3107 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3163
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3164 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3193
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2881 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 2935
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2936 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2995
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P ++ L ++ + A G+ + L+S + GL +YG+LGHG DN
Sbjct: 2996 MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTS--SGELYTWGLGEYGRLGHG-DNT---- 3048
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3049 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3099
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3100 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3155
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3156 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3213
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3214 VQGLEGQKITRVACGSSHSV 3233
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3924 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3981
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3982 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4027
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4028 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4085
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4086 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4144
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4145 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4174
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 387 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 446
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 506
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 507 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 558
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 559 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 612
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 613 LLEGLQGKKVID----VAAGSTHCLVLTEDSEVHSWG 645
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2868 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2925
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 2926 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 2983
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +A G++H+ + S G
Sbjct: 2984 EGDDGKLGHFSRMNCD--------------KPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3029
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3030 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3085
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3086 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3145
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3146 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3189
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 436 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 481
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 482 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 539
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 597
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H LV+ + + V
Sbjct: 598 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 641
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3911 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4028
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4029 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4074
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 4075 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 4130
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4131 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4190
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4191 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L IR +A G S H + G YTWG E G+LGHGD + +P +V
Sbjct: 3001 PRLIQALKTKRIRDIAYG--SSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3058
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3059 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3118
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3119 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3176
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3177 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4091 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4147
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4148 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4207
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4208 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4248
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3153 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3210
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3211 PTLVQGLEGQKITRVACGSSHSVAWT 3236
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 412
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 473 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 529
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 530 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 583
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ + C S +A+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 567 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 626
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
AG +H +V+TED ++G N Q + EP+ L S+ + ACG
Sbjct: 627 AGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 680
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 446 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 505
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 612
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 613 -------LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTA 665
Query: 223 IAALAGETIVKVACGTNHTVA 243
L + IV +ACG + A
Sbjct: 666 FPGLDSKHIVGIACGPAQSFA 686
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3316 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3375
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3376 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3481
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3482 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3541
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 3542 ----AIATGSLHCVCCTEDGEVYTWG 3563
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2316 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2375
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2376 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2435
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2436 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 2484
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2485 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2541
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2542 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2571
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2259 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 2313
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2314 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2373
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 2374 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 2426
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2427 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2477
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2478 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2533
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 2534 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 2591
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 2592 VQGLEGQKITRVACGSSHSV 2611
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3301 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3358
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3359 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3404
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 3405 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3462
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3463 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3521
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3522 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3551
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2233 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2286
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2287 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2346
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 2347 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2390
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 2391 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2446
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 2447 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2506
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 2507 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 2564
Query: 403 TNV 405
V
Sbjct: 2565 GQV 2567
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3288 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 3405
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 3406 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3451
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ E GS S G +
Sbjct: 3452 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 3507
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3508 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3567
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3568 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2379 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2436
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2437 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2496
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2497 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 2554
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 2555 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 3468 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3524
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3525 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3584
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 3585 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 3625
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2531 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2588
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2589 PTLVQGLEGQKITRVACGSSHSVAWT 2614
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2229 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2285
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2286 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2342
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2400
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P ++ L ++ + A G+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLVLTEDSEVHSWG 735
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +A G++H+ + S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H LV+ + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 731
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L IR +A G S H + G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIQALKTKRIRDIAYG--SSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ + C S +A+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
AG +H +V+TED ++G N Q + EP+ L S+ + ACG
Sbjct: 717 AGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 770
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
L + IV +ACG + A
Sbjct: 756 FPGLDSKHIVGIACGPAQSFA 776
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4034 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4093
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4094 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4199
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4200 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4259
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4260 ----AIATGSLHCVCCTEDGEVYTWG 4281
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3033 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3092
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3093 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3152
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3153 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3201
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3202 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3258
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3259 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3288
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2976 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3030
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3031 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3090
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3091 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3143
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3144 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3194
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3195 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3250
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3251 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3308
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3309 VQGLEGQKITRVACGSSHSV 3328
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4019 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4076
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4077 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4122
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4123 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4180
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4181 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4239
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4240 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4269
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 482 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 541
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 542 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 601
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 602 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 653
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 654 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 707
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 708 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 740
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2963 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3020
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3021 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3078
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3079 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3124
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3125 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3180
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3181 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3240
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3241 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3284
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4005 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4064
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4065 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4122
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4123 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4168
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4169 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4224
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4225 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4284
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4285 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 531 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 576
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 577 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 634
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 692
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 693 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 736
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3096 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3153
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3154 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3213
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3214 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3271
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3272 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4186 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4242
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4243 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4302
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4303 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4343
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3248 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3305
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3306 PTLVQGLEGQKITRVACGSSHSVAWT 3331
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 507
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 568 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 624
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 625 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 678
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 541 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 600
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 707
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 708 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 760
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 761 LPGLDSKHIVGIACGPAQSFA 781
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3972 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4031
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4032 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4137
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4138 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4197
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4198 ----AIATGSLHCVCCTEDGEVYTWG 4219
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2971 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3030
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3031 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3090
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3091 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3139
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3140 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3196
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3197 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3226
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2914 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 2968
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2969 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3028
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3029 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3081
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3082 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3132
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3133 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3246
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3247 VQGLEGQKITRVACGSSHSV 3266
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3957 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4014
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4015 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4060
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4061 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4177
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4178 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4207
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 422 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 481
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 593
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 594 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 647
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 648 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 680
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3016
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3017 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3062
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3063 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3118
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3119 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3178
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3179 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3222
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3944 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4061
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4062 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4107
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 4108 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4163
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4223
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4224 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 471 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 516
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 517 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 574
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 632
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 633 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3034 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3091
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3092 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3151
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3152 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3209
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3210 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4124 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4180
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4181 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4240
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4241 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4281
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3186 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3243
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3244 PTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 447
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 508 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 564
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 618
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 647
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 648 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 700
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 701 LPGLDTKHIVGIACGPAQSFA 721
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4095 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4154
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4155 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4260
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4261 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4320
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4321 ----AIATGSLHCVCCTEDGEVYTWG 4342
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3094 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3153
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3154 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3213
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3214 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3262
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3263 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3319
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3320 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3349
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 3037 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3091
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3092 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3151
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3152 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3204
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3205 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3255
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3256 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3311
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3312 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3369
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3370 VQGLEGQKITRVACGSSHSV 3389
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4080 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4137
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4138 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4183
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4241
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4300
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4301 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 545 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 604
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 605 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 664
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 665 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 716
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 717 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 770
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 771 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 803
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 3024 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3081
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3082 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3139
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3140 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3185
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3186 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3241
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3242 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3301
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3302 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3345
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4066 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4125
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4183
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4184 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4229
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4230 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4285
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4345
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4346 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 594 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 639
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 640 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 697
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 755
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 756 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 799
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3157 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3214
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3215 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3274
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3275 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3332
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3333 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4247 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4303
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4304 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4363
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4364 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4404
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3309 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3366
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3367 PTLVQGLEGQKITRVACGSSHSVAWT 3392
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 570
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 631 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 687
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 688 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 741
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 604 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 663
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 770
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 771 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 823
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 824 LPGLDSKHIVGIACGPAQSFA 844
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 125/252 (49%), Gaps = 18/252 (7%)
Query: 36 RKGALDGNLVSPTRLRPLVGVD-----IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
+ G+ G +V ++ P++ VD I+ V + AV G YTWG NE+GQL
Sbjct: 204 KSGSKVGEIVDKNQMTPVL-VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQL 262
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G GD+ P ++ LS I GR H +++ G+ +G GQLG G +++
Sbjct: 263 GLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSL 322
Query: 151 IEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY---- 203
+ P V + + A GA+FT+ +S E + + G +YGQLG D +Y
Sbjct: 323 LHPKKVLYFEQQQKKIVQVATGANFTMAVS--ENGELFSFGHGEYGQLGATEDTQYMDWN 380
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
N D L Y P+ + AL + KVACG HT+AV + VYTWG+G G LG
Sbjct: 381 NNGDRDDHLKYSL---PKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGF 437
Query: 264 REQKDEWVPRRV 275
++K + VP+RV
Sbjct: 438 GDRKFQLVPQRV 449
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 169/420 (40%), Gaps = 77/420 (18%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L G I+ +A G H +AV G Y+WGR + G+LGH K P ++
Sbjct: 23 LDPAVIQLLKGKRIKQIACG--EAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPALI 80
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVS 161
L +I K G H++ +T+ G +G ++++ +E + ++ S
Sbjct: 81 KALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLVEMTGIKSFAS 140
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY------- 214
+V + +++L+ + A + Q + T N T D + +
Sbjct: 141 KVADHS----LSMYLNGEKAAYDEESASSSVLQ-DNPTANGLVTDDQEEEEEFLPEAIVD 195
Query: 215 -EAQPRPRAIAALAGET-------------------IVKVACGTNHTVAVDSKGYVYTWG 254
+ + +P + GE IV ++ G ++ AV S G VYTWG
Sbjct: 196 TQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWG 255
Query: 255 FGGYGRLGHREQKDEWV---PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
F G+LG D W PR + +++ I+ G + + + G LY W
Sbjct: 256 FNEKGQLG---LGDRWYHGNPRVIRSLSNKSIVN----IACGRQHMAAISKSGDLYTWGL 308
Query: 310 --------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS---SCISWGHAQ 358
GKLK+ ++PK ++ + + +F A S S+GH +
Sbjct: 309 GVFGQLGHGKLKS----LLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGE 364
Query: 359 YGELGYGPYGQKSS-------------AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
YG+LG Q ++PK+V LE + V VACG+ H++ + +V
Sbjct: 365 YGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDV 424
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR I +L+ ++IV +ACG H A+ G +YTWG G +G+LGH + K P++V F+
Sbjct: 273 PRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFE 332
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----------------LKNNGD-----D 318
+ ++ G+ + + G+L+ +G NNGD
Sbjct: 333 QQQ--KKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLK 390
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ PK + L +R + G++H V D+ +WG G LG+G +K +P++
Sbjct: 391 YSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFG--DRKFQLVPQR 448
Query: 378 VDILEGMHVISVACGYGHSLVI 399
V L G + SV+ G H+L++
Sbjct: 449 VPSLSGEEISSVSGGEKHTLIV 470
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
++FG K GQLG +++++P+ ++ L + ACG + L+ E + + G
Sbjct: 4 ISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHS--LAVTEFGDVYSWGRG 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ G+LGH P I AL E IVKVACG H++A+ G V
Sbjct: 62 KEGELGHPQK--------------AMTAPPALIKALEHERIVKVACGNYHSLALTDTGKV 107
Query: 251 YTWG 254
Y WG
Sbjct: 108 YQWG 111
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G R L +L P +++ L V +R VA G H +AV + YTWG G
Sbjct: 379 WNNNGDRDDHLKYSL--PKQVKALESVKVRKVACG--HLHTIAVTTDNDVYTWGWGSSGC 434
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFGWNK 138
LG GD+ + P V LS +I G HT++V + D + AF + +
Sbjct: 435 LGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIVRSSDTTTFAFDYKQ 484
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 15/144 (10%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG----------- 91
+L+ P ++ + V + +AV G +++G E GQLG
Sbjct: 321 SLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWN 380
Query: 92 ----HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
D ++ P V L K++K G HT+ VT D + +GW G LG G
Sbjct: 381 NNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDR 440
Query: 148 RNEIEPSPVRCLVSEVTATACGAD 171
+ ++ P V L E ++ G +
Sbjct: 441 KFQLVPQRVPSLSGEEISSVSGGE 464
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
++G ++GQLG + P ++ L +IK+ G +H++ VTE G+ ++G K G
Sbjct: 5 SFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEG 64
Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
+LG P+ ++ L E + ACG
Sbjct: 65 ELGHPQKAMTAPPALIKALEHERIVKVACG 94
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3200 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3256
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3257 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2974 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3028
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSR 3088
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3141
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3142 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3193 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3306
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3307 VQGLEGQKITRVACGSSHSV 3326
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
+R AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3001
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L +V+G I + G G+LGH + + +PR I AL + I
Sbjct: 3062 HAMAL-TVDG-KIFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3105
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279
Query: 403 TNV 405
V
Sbjct: 3280 GQV 3282
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+ + ++ G+ S + +WG Y LG+G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVK----VECGSQFSVALTKSGA 4222
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4283 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 536 LE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK L DL +RC ++ + D +WG LG+G ++ PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
+ L+G VI VA G H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3094 PRLIEALKTKRIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3151
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3212 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 3270 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S VA+ G YTWG+ + +LGHG RP V L K+
Sbjct: 4201 DLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4260
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVW 175
G H V TEDG +G N GQLG G+ P V L ++ ACG+ T+
Sbjct: 4261 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYN 204
S+ + A NA G+L EYN
Sbjct: 4321 WSTSKPA---NA-----GKLPTQVPMEYN 4341
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ YTWG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +V++AC
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G V++WG G GRLGH + P+ + I+ GS
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + ++ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAL 673
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
I K G ++ +T+DG +G + +LG G+ + P + L +V
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 715
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ T L+ E + + + G N+ ++++ +P P A+ L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 759
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S I
Sbjct: 16 VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVIC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +ED + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 74 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG GT T+DS + P+ I A G + +A
Sbjct: 132 LAVTMAGQVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFEGVCVKMIA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +P +V + ++ +++ G
Sbjct: 178 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 233
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L L + + G H + ++
Sbjct: 234 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSE 293
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G S P +V E + VACG+ H+L + ++ NV
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCS--PVQVHFPEDQKISQVACGWRHTLALSEKKNV 348
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 19/247 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G+ +WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGQVQSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 151 LGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + E + ACG T+ +S + ++ G +YGQLGHG
Sbjct: 211 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 259
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL TI +++ G HT+A+ S+G +Y WG+ +G++G D
Sbjct: 260 -----FEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 314
Query: 269 EWVPRRV 275
P +V
Sbjct: 315 HCSPVQV 321
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+T+V V+ G +H+VA+ + + +WG G G+LGH + +D VP + F + +
Sbjct: 14 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGI---TS 70
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + Q+Y W G+L + N D P+P+ L G ++ + G+ H
Sbjct: 71 VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 130
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ EG+ V +A G H+ + +
Sbjct: 131 CLAVTMAGQVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTE 188
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 1 MAELEAEKMVEEETG------KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLV 54
++ +E EKMV G G L G + + +G G + +LV P +L L
Sbjct: 217 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLV-PHKLEALK 273
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
I ++ G H +A+ EG+ Y WG N+ GQ+G G+ P V KI +
Sbjct: 274 DSTISQISGGWR--HTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQ 331
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-------VTATA 167
G HT+ ++E N ++G GQLG+G I + P + L ++ ++TA
Sbjct: 332 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGSGCKKLESSTA 391
Query: 168 CGADFTVWLSSVEGASIL-NAGLPQYGQ-LGHGTDNEYNTKDSSVK 211
VW+S E +I+ + +P+ G+ G + N ++ VK
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPKAGEGTARGNGADANVPENDVK 437
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
ST + A GR +++ PT L + V I+ VA HC+A+ EG Y+WG +
Sbjct: 4050 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGD 4109
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+K+ DRP ++ +L +I G H+ +T G +G ++G+LG G
Sbjct: 4110 DGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4169
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4170 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4229
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4230 --------------PLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ + G+++ WG
Sbjct: 4276 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4316
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 152/342 (44%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P LS + + G VT DG +
Sbjct: 3991 DGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A + G + LSS EG + + G
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSS-EG-HVYSWGEG 4108
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG Y+ RP+ I L G IV +ACG +H+ A+ S G++
Sbjct: 4109 DDGKLGHGNKVSYD--------------RPKLIEDLLGVEIVDIACGGHHSAAITSAGWL 4154
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4155 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4212
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S + +WG Y LG
Sbjct: 4213 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4272
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4273 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4312
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 163/350 (46%), Gaps = 36/350 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG GD P + LS++ IKK +G H + +T+DG
Sbjct: 3060 VSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGK 3119
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ + +P + L S+ + ACG+ + ++S + GL
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3177
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG Q RP+ + AL G +V+VACG+ T+A+ +
Sbjct: 3178 GEYGRLGHGDTI--------------TQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD 3223
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
GYVY+WG G +G+LG + P VD V+ E G+ S G+++
Sbjct: 3224 GYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVE----CGAQFSLALTKYGEVW 3279
Query: 308 MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
WGK +G+D KP + L G + + G +H D+ + +WG +G
Sbjct: 3280 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+ G G P V LE V V+CG HS+ V+VD+ + G +
Sbjct: 3340 QQGNGTTSVNRK--PSLVHDLEDARVNRVSCGSSHSIAWVLVDQPSNGNQ 3387
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 117/244 (47%), Gaps = 24/244 (9%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN VS P + L+GV+I +A G H A+ G YTWG+ G+LGHGD +
Sbjct: 4116 GNKVSYDRPKLIEDLLGVEIVDIACG--GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4173
Query: 99 DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP +V L YK+ G+G + T+ VT+D N ++G +G+LG G P +
Sbjct: 4174 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4233
Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L V CG+ F+V L+ ++ G Y +LGHGTD+
Sbjct: 4234 DSLAGLGVVKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR----------- 4280
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RPR +AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V
Sbjct: 4281 ---RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4337
Query: 276 DVFQ 279
Q
Sbjct: 4338 HALQ 4341
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ I D+
Sbjct: 3082 DNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDK 3141
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ + +G +G ++G+LG G + P V+ L+
Sbjct: 3142 PKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALI 3201
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
V ACG+ ++ + + G +G+LG G+D Y
Sbjct: 3202 GHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYT-------------- 3247
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P + L +++V CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3248 -PLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3306
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3307 RGKKIIH----VAVGALHCLAVTDTGQVYAWG 3334
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y+ G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4040 FAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE 4099
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P + L+ E+ ACG + ++S +
Sbjct: 4100 GHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS--AGWLYTW 4157
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG ++ Q RP+ + AL ++ VACG+ T+ V
Sbjct: 4158 GKGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4203
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4204 DDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE----CGSQFSVALTRSGA 4259
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H +D +WG
Sbjct: 4260 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4319
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4320 EGQLGDG----TTSALHRPRLVHALQGKKITRVACGSAHTL 4356
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 145/346 (41%), Gaps = 50/346 (14%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G +V+++G A G
Sbjct: 3015 YVWGLNDKDQLGGLKGSKIKL--PVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 3072
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP + L V + A G + L+ + + + G + G+
Sbjct: 3073 TNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3130
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + +P+ I L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 3131 LGHGNCISLD--------------KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWG 3176
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V + V+ ++ GS ++ A G +Y W
Sbjct: 3177 LGEYGRLGHGDTITQTRPKLVQALIGHRVVQ----VACGSRDAQTMALTTDGYVYSWGDG 3232
Query: 310 --GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI--------SWGHAQY 359
GKL G D Y L+D R + G + GA S +WG Y
Sbjct: 3233 DFGKLGRGGSDGCYTPLLVD------RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDY 3286
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P V+ L G +I VA G H L + D V
Sbjct: 3287 FRLGHG--NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 3330
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 19/266 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ I +A+ H +A+ +G Y+WG + G+LGHGD I D P ++
Sbjct: 557 PQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA 616
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + I G +++ ++ +G +G +G+LG G+ + + P+ V L V
Sbjct: 617 LLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVH 676
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + T P+ +
Sbjct: 677 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--------------PKIVDK 722
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L +VKV CG+ + A+ + G VYTWG G RLGH ++ P+ ++ + V
Sbjct: 723 LLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKV-- 780
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
+S G+ + +Y WG+
Sbjct: 781 --KDLSVGTTHILALTEDQFVYGWGR 804
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+ +I F+A G S + A+ G YTWGR G+LGHG+ PT+V+
Sbjct: 611 PKLIEALLEKNIIFIACG--STYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTT 668
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
L + + G+G S T+ VT G ++G +G+LG G P V + L V
Sbjct: 669 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 728
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+ L++ + G +LGHG++ E P+ I
Sbjct: 729 VKVFCGSQFSAALTA--HGEVYTWGKGDAYRLGHGSE--------------EHVRYPKVI 772
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+L + ++ GT H +A+ +VY WG YG++
Sbjct: 773 ESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + + + I +A + H +A+ G VY+WG G GRLGH + P+ ++
Sbjct: 557 PQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA 616
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
N++ I+ GS S+ + G+LY WG+ N DD M P + L G
Sbjct: 617 LLEKNII----FIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGH 672
Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
++ C + V A SWG YG+LG G G S PK VD L ++V+
Sbjct: 673 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 730
Query: 389 VACG 392
V CG
Sbjct: 731 VFCG 734
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + V C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 4230 PLKIDSLAGLGV--VKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAA 4287
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V ++ G +G N GQLG G+ P V L ++T
Sbjct: 4288 LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITR 4347
Query: 166 TACGADFTV-WLSSVEGASILNAGLPQ 191
ACG+ T+ W ++ S + A P
Sbjct: 4348 VACGSAHTLAWSTAKATQSRMPASTPM 4374
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ PT + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3294 DHHVRKPTLVEGLRGKKIIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P++V +L ++ + G SH++
Sbjct: 3352 PSLVHDLEDARVNRVSCGSSHSI 3374
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++PT + L G + VA G + V G ++WG + G+LG G P
Sbjct: 659 DVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 718
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
IV +L + K G + +T G +G +LG GS + P + L
Sbjct: 719 IVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESL 775
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 81/231 (35%), Gaps = 75/231 (32%)
Query: 241 TVAVDSKGYVYTW----------------------------------------------- 253
T++ D G +Y W
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADG 4046
Query: 254 -----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G+G GRLG +P ++ Q +V + +S+G + + G +Y
Sbjct: 4047 KIYSTGYGAAGRLGIGGTDSVMIPTLLESIQ--HVFIKKVAVSSGGKHCIALSSEGHVYS 4104
Query: 309 WGKLKNNGDD----------WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGH 356
WG+ GDD + PK + DL G + + G HH S+ +WG
Sbjct: 4105 WGE----GDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGG-HHSAAITSAGWLYTWGK 4159
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG--HSLVIVDRTNV 405
+YG LG+G PK V+ L+ VI VACG G +L + D NV
Sbjct: 4160 GRYGRLGHG--DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4208
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 2863 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 2922
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G +G ++G+LG ++++P V L V
Sbjct: 2923 SLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L E ++ + G YG+LG G + P +
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKVD 3028
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL G VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3029 ALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3088
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 3089 ----AIATGSLHCVCCTEDGEVYTWG 3110
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ +G+ ++WG + G+LGH +
Sbjct: 1862 GVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXN 1921
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 1922 CDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 1981
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
LV V ACG+ L+ + + + G +G+LG G N
Sbjct: 1982 VLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV----------- 2030
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2031 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2087
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2088 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 2117
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 152/340 (44%), Gaps = 35/340 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTE 127
AV VEG+ Y G G+LG G P V+ LS Y +KK +G H +T
Sbjct: 1840 FAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTA 1899
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
DG ++G G+LG S N +P + L S + ACG+ + L+S +
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTS--SGELYT 1957
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAV 244
GL +YG+LGHG DN Q +P+ + L G +V+VACG+ T+A+
Sbjct: 1958 WGLGEYGRLGHG-DNT-------------TQLKPKMVKVLVGHRVVQVACGSRDAQTLAL 2003
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
+G V++WG G +G+LG + VP+ ++ V I G+ S G
Sbjct: 2004 TDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV----CQIECGAQFSLALTKSG 2059
Query: 305 QLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
++ WGK +G D KP + L G + + G +H D+ + +WG
Sbjct: 2060 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2119
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+G+ G G + P V LEG + VACG HS+
Sbjct: 2120 DHGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSV 2157
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGY 2847
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 2848 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2905
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 2906 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTW 2951
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 2952 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTEDDTVWSWGDGD 3009
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G ++ G+ S + +WG Y LG+G
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3068
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3069 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3098
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 153/371 (41%), Gaps = 59/371 (15%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS +
Sbjct: 1779 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNAVQV 1832
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---------- 164
G VT +G A G +G+LG G + P V L S V
Sbjct: 1833 AGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGR 1892
Query: 165 -ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ATA AD + + G G+LGH + + +PR I
Sbjct: 1893 HATALTAD----------GKVFSWGEGDDGKLGHFSRXNCD--------------KPRLI 1928
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AL I +ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V
Sbjct: 1929 EALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRV 1988
Query: 284 LPPEAVISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRC 335
+ ++ GS ++ A G ++ W GKL G + P+ + L+G +
Sbjct: 1989 VQ----VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQ 2044
Query: 336 MDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
++ G S + +WG Y LG+G P+ V+ L G ++ VA G
Sbjct: 2045 IECGAQFSLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGAL 2102
Query: 395 HSLVIVDRTNV 405
H L + D V
Sbjct: 2103 HCLAVTDAGQV 2113
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 147/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 2834 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2893
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ G
Sbjct: 2894 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGK 2953
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 2954 G--RYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 2997
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP +VD + + GS S G
Sbjct: 2998 EDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVK----VECGSQFSVALTKSGA 3053
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3054 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3113
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3114 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 1925 PRLIEALKSRRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 1982
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 1983 LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2042
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2043 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 2100
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 2101 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ V C S VA+ G YTWG+ + +LGHG
Sbjct: 3015 RGGSDGCKV-PMKVDALTGLGA--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3071
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 3072 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3131
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
L +V ACG+ T+ S+ + AS L A +P +Y L
Sbjct: 3132 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYSHL 3174
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2077 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2134
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2135 PTLVQGLEGQKITRVACGSSHSVAWT 2160
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
+T + AVGR +++ PT L + V ++ VA HC+A+ EG Y+WG +
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP ++ EL +I G H+ +T G +G ++G+LG G
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4071
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4072 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4131
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G +YTWG G Y RLGH
Sbjct: 4132 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT 4177
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ + G+++ WG
Sbjct: 4178 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4218
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P + LS + + G VT DG A
Sbjct: 3893 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3952
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 3953 TGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4010
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L+Y+ RP+ I L G IV VACG +H+ A+ S G++
Sbjct: 4011 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDVACGGHHSAAITSAGWL 4056
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4057 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4114
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S S +WG Y LG
Sbjct: 4115 DGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLG 4174
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4175 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4214
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 148/340 (43%), Gaps = 38/340 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 2912 YVWGLNDKDQLGGLKGSKIKL--PVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2969
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP P+ L V + A G + L+ + + + G + G+
Sbjct: 2970 TNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALT--QDGRVFSWGEGEDGK 3027
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + + +PR I +L + I VACG+ H+ A+ S G +YTWG
Sbjct: 3028 LGHGNCSSLD--------------KPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWG 3073
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V V+ ++ GS ++ A G +Y W
Sbjct: 3074 LGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3129
Query: 310 --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y L+D L+G + ++ G + +WG Y LG+G
Sbjct: 3130 DFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3189
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P V+ L G VI VA G H L + D V
Sbjct: 3190 --NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQV 3227
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
DGN P + L I+ VA H +A+ +GR ++WG E G+LGHG+ D+
Sbjct: 2979 DGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDK 3038
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ +T G +G ++G+LG G +++P V+ LV
Sbjct: 3039 PRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLV 3098
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ ++ S+ + G +G+LG G+D Y
Sbjct: 3099 GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT-------------- 3144
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P + L G +V++ CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3145 -PLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3203
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ V+ ++ G+++ GQ+Y WG
Sbjct: 3204 RGKKVIH----VAVGALHCLAVTDTGQVYAWG 3231
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 190/424 (44%), Gaps = 46/424 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P + LS+Y IKK +G H + +T+D
Sbjct: 2955 FVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQD 3014
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 3015 GRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS--SGELYTW 3072
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG N Q +P+ + +L G+ +++VACG+ T+A+
Sbjct: 3073 GLGEYGRLGHGDTN--------------TQLKPKLVQSLVGQRVIQVACGSRDAQTMALT 3118
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G VY+WG G +G+LG + P VD V+ I G+ S G+
Sbjct: 3119 ADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQ----IECGAQFSLALTKYGE 3174
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQ 358
++ WGK +G+D KP + L G + + G +H D+ + +WG
Sbjct: 3175 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDND 3234
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR--TNVGERLDQLDV 414
+G+ G G + P V L+ V V+CG HS+ V+ D+ N E +
Sbjct: 3235 HGQQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAANNQEPVTFPTA 3292
Query: 415 YD--GKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSDYESDDS 472
D G+AS + +D S VP V++ + + SS ESD +
Sbjct: 3293 KDPLGQASLRLKNILDTESIVPGNSNVGDVADVATSVNRPSLSS------IILSLESDVA 3346
Query: 473 EEQA 476
++QA
Sbjct: 3347 KQQA 3350
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I VA G H A+ G YTWG+ G+LGHGD + P +V
Sbjct: 4026 PKLIEELLGTEIVDVACG--GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4083
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4084 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4143
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ SI G Y +LGHGTD+ RPR +
Sbjct: 4144 IKVECGSQFSVALT--RSGSIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4187
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4188 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQ 4243
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 3942 FAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4001
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P + L+ +E+ ACG + ++S +
Sbjct: 4002 GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITS--AGWLYTW 4059
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q P+ + AL ++ VACG+ T+ V
Sbjct: 4060 GKGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4105
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP +++ V+ E GS S G
Sbjct: 4106 DDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVE----CGSQFSVALTRSGS 4161
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H +D +WG
Sbjct: 4162 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4221
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G + A+ P+ V L+G + VACG H+L
Sbjct: 4222 EGQLGDG----TTCALQRPRLVHALQGKKITRVACGSAHTL 4258
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + LV +I F+A G S + A+ G YTWGR G+LGHG+ PT+VS
Sbjct: 549 PKLIESLVDKNITFIACG--STYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSA 606
Query: 107 LSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
L+ + I G+G S T+ VT G ++G +G+LG G P V + L V
Sbjct: 607 LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINV 666
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG F+ L++ + G + +LGHG NE + + P+AI
Sbjct: 667 AKVYCGGQFSAALTAY--GEVYTWGKGEAYRLGHG--NEEHVR------------YPKAI 710
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
AL + + ++ G+ H +A+ VY WG YG++
Sbjct: 711 EALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ + Y+WG + G+LGHGD+ + P ++ L I G +++ ++ +
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG G+ + + P+ V L + ACG+ + L + +
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSW 636
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G N T P+ + L + KV CG + A+ +
Sbjct: 637 GDGDYGKLGRGGCNGSKT--------------PKIVDKLLDINVAKVYCGGQFSAALTAY 682
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VYTWG G RLGH ++ P+ ++ + V + GS++ +Y
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKV----KELCVGSLHVLALTEDQLVY 738
Query: 308 MWGK 311
WG+
Sbjct: 739 GWGR 742
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 29/248 (11%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A D +L+ E +S+ + G G+LGHG Y P+
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYE--------------EPKL 551
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I +L + I +ACG+ ++ A+ S G +YTWG G YGRLGH D VP V +
Sbjct: 552 IESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHM 611
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNG-DDWMYPK---PLMDLSGWNL 333
++ +G + C G ++ W GKL G + PK L+D++ +
Sbjct: 612 IV--YVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKV 669
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
C G + A +WG + LG+G ++ PK ++ L+ V + G
Sbjct: 670 YC--GGQFSAALTAYGEVYTWGKGEAYRLGHG--NEEHVRYPKAIEALKTKKVKELCVGS 725
Query: 394 GHSLVIVD 401
H L + +
Sbjct: 726 LHVLALTE 733
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + + C S VA+ G YTWG+ + +LGHG
Sbjct: 4123 RGGSDGCKV-PMKIESLAGLGV--IKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDD 4179
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G+ P V
Sbjct: 4180 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLV 4239
Query: 157 RCLV-SEVTATACGADFTVWLSSVEG 181
L ++T ACG+ T+ S+++
Sbjct: 4240 HALQGKKITRVACGSAHTLAWSTMKA 4265
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 31/253 (12%)
Query: 5 EAEKMVEEETGKEKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRL 50
E K++E +K + CGST A+ GR +++ PT +
Sbjct: 547 EEPKLIESLV--DKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLV 604
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
L G I +VA G + V G ++WG + G+LG G P IV +L
Sbjct: 605 SALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI 664
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ K G + +T G +G + +LG G+ + P + L ++ C
Sbjct: 665 NVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVG 724
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
V L+ E + G YGQ+ D T S P L+G+
Sbjct: 725 SLHV-LALTEDQLVYGWGRNDYGQI----DPALGTIVS----------EPTLCPTLSGKN 769
Query: 231 IVKVACGTNHTVA 243
++ + CG + A
Sbjct: 770 VIGLVCGPTQSFA 782
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ D G +Y WG G+LG E +P + + L P ++ G
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESL---SALRP-VQLTGGEQTLFAV 3944
Query: 301 AGGGQLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
G++Y G+L G D M P L + ++ ++SG H + ++
Sbjct: 3945 TADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG G+LG+G + S PK ++ L G ++ VACG HS I
Sbjct: 4005 YSWGEGDDGKLGHG--NRLSYDRPKLIEELLGTEIVDVACGGHHSAAI 4050
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG + G+LGHG++ DRP ++
Sbjct: 1064 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIE 1123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 1124 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 1229
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 1230 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 1289
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 1290 ----AIATGSLHCVCCTEDGEVYTWG 1311
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 63 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 122
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 123 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 182
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 183 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 231
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 232 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 288
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 289 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 318
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 6 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 60
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 61 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 120
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 121 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 173
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 174 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 224
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 225 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 280
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTL 338
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 339 VQGLEGQKITRVACGSSHSV 358
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 989 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1048
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 1049 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAKDG 1106
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 1107 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1152
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 1153 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 1210
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 1211 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1269
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 1270 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 1299
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 1035 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 1094
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G K G+LG G+ P + L EV A G + +++ +
Sbjct: 1095 GEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 1152
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 1153 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 1198
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 1199 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGA 1254
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 1255 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1314
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 1315 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P + L IR +A G S H A+ G YTWG E G+LGHGD + +P
Sbjct: 122 NCDKPRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 179
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T++G ++G G+LG G P + L
Sbjct: 180 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 239
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
+ V CGA F++ L+ + + G Y +LGHG+D
Sbjct: 240 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 297
Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
DS A+ +P + L G+ I +VACG++H+
Sbjct: 298 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 357
Query: 242 VA 243
VA
Sbjct: 358 VA 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 1216 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1272
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 1273 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1332
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 1333 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 1373
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 278 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 335
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 336 PTLVQGLEGQKITRVACGSSHSVAWT 361
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P + LS + + G + VT DG A
Sbjct: 4256 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4315
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 4316 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4373
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L Y+ RP+ I L G IV +ACG +H+ A+ S G++
Sbjct: 4374 DDGKLGHGN-----------RLMYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4419
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4420 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4477
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S I +WG Y LG
Sbjct: 4478 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4537
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4538 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4577
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
+T + A GR +++ PT L + V ++ VA HC+A+ EG Y+WG +
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP ++ EL +I G H+ +T G +G ++G+LG G
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4435 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4494
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G +YTWG G Y RLGH
Sbjct: 4495 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4540
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ G+++ WG
Sbjct: 4541 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4581
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ + D+
Sbjct: 3324 DSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDK 3383
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ +T G +G ++G+LG G +++P V+ LV
Sbjct: 3384 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLV 3443
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ ++ S+ + G +G+LG G+D Y
Sbjct: 3444 GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT-------------- 3489
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I L G +V++ CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3490 -PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3548
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ V+ ++ G+++ GQ+Y WG
Sbjct: 3549 RGKKVVH----VAVGALHCLAVTDTGQVYAWG 3576
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I +A G H A+ G YTWG+ G+LGHGD + P +V
Sbjct: 4389 PKLIEELLGTEIVDIACG--GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4446
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4447 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4506
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ +I G Y +LGHGTD+ RPR +
Sbjct: 4507 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4550
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4551 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4606
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 36/346 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P ++ LS+Y IKK +G H + +T+D
Sbjct: 3300 FVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQD 3359
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 3360 GKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTW 3417
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG D++ ++ +P+ + +L G+ +++VACG+ T+A+
Sbjct: 3418 GLGEYGRLGHG--------DTATQM------KPKLVQSLVGQRVIQVACGSRDAQTMALT 3463
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G VY+WG G +G+LG + P +D V+ I G+ S G+
Sbjct: 3464 ADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGE 3519
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQ 358
++ WGK +G+D KP + L G + + G +H D+ + +WG
Sbjct: 3520 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3579
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR 402
+G+ G G + P V L+ V V+CG HS+ V+ D+
Sbjct: 3580 HGQQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3623
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 149/340 (43%), Gaps = 38/340 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 3257 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3314
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP + L + + A G + L+ + I + G + G+
Sbjct: 3315 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALT--QDGKIFSWGEGEDGK 3372
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG +SV L +PR I +L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 3373 LGHG---------NSVSLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3418
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V V+ ++ GS ++ A G +Y W
Sbjct: 3419 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3474
Query: 310 --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y L+D L+G + ++ G + +WG Y LG+G
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P V+ L G V+ VA G H L + D V
Sbjct: 3535 --NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3572
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
+AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 4305 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4364
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ P + L+ +E+ ACG + ++S +
Sbjct: 4365 GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 4422
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q P+ + AL ++ VACG+ T+ V
Sbjct: 4423 GKGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4468
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P +++ V+ E GS S G
Sbjct: 4469 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGA 4524
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4525 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4584
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4585 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4621
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 25/311 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ + +A+ H +A+ + Y+WG + G+LGHGD++ D P +V
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 545
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I G +++ V++ +G +G +G+LG G+ N + P+ V L V
Sbjct: 546 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVY 605
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + P+ +
Sbjct: 606 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 651
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L + KV CG + A+ + G VYTWG G RLGH ++ P+ ++V + V
Sbjct: 652 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKV-- 709
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD----WMYPKPLM--DLSGWNLRCMDSG 339
+ G+ + +Y WG+ D + P+P + LSG N+ + G
Sbjct: 710 --KELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACG 767
Query: 340 NMHHFVGADSS 350
F S+
Sbjct: 768 LTQSFAWCTSA 778
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
P+ + + + + +A ++ H +A+ VY+WG G GRLGH R DE P+ V
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDE--PKLV 543
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
+ N+ I+ GS S+ + G+LY WG+ N D+ + P + L+
Sbjct: 544 EALVDKNI----TFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALN 599
Query: 330 GWNL---RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G + C + V A SWG YG+LG G G S PK VD L ++V
Sbjct: 600 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 657
Query: 387 ISVACG 392
V CG
Sbjct: 658 AKVYCG 663
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + + C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 4495 PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAA 4552
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V T+ G +G N GQLG G+ P V L ++T
Sbjct: 4553 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITR 4612
Query: 166 TACGADFTVWLSSVEGA 182
ACG+ T+ S+++
Sbjct: 4613 VACGSAHTLAWSTMKAT 4629
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 95/251 (37%), Gaps = 33/251 (13%)
Query: 8 KMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL---------------DGNLVSPTRLRP 52
K+VE +K + CGST + AV G L N++ PT +
Sbjct: 541 KLVEALV--DKNITFIACGST-YSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA 597
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L G + +VA G + V G ++WG G+LG G P IV +L +
Sbjct: 598 LNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINV 657
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
K G + +T G +G + +LG G+ + P + L + C +F
Sbjct: 658 AKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNF 717
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
V L+ E + G YGQ+ D T P P L+G+ I+
Sbjct: 718 HV-LALTEDQLVYGWGRNDYGQI----DPALGT----------IVPEPTLCPTLSGKNII 762
Query: 233 KVACGTNHTVA 243
+ACG + A
Sbjct: 763 GLACGLTQSFA 773
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 67/227 (29%)
Query: 241 TVAVDSKGYVYTW----------------------------------------------- 253
T++ D G +Y W
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4311
Query: 254 -----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G+G GRLG VP ++ Q +V + +++G + + G +Y
Sbjct: 4312 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQ--HVFVKKVAVNSGGKHCLALSSEGHVYS 4369
Query: 309 WGKLKN----NGDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYG 360
WG+ + +G+ MY PK + +L G + + G HH S+ +WG +YG
Sbjct: 4370 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGG-HHSAAITSAGWLYTWGKGRYG 4428
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG--HSLVIVDRTNV 405
LG+G + PK V+ L+ VI VACG G +L + D NV
Sbjct: 4429 RLGHG--DSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4473
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 183/407 (44%), Gaps = 47/407 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ +WGR E GQLGHGD R PT +S L I
Sbjct: 16 VLLVSAG--ASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTC 73
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT+ +E G + ++GW G+LG G + + P P++ L + ACG
Sbjct: 74 GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHC-- 131
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + +L+ G Q G+LG GT +DS + P+ I I VA
Sbjct: 132 LAVTMDSQVLSWGRNQNGELGLGT-----AEDSLL---------PQKIQIFEEIPIKMVA 177
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H+VA+ G +Y WG+G YG LG ++ D +P +V V A+++ G
Sbjct: 178 AGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDK-----MAMVACGWR 232
Query: 296 NSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ C + G LY WGK G +D + P+ + LS SG H + S
Sbjct: 233 HTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSD-KFISQVSGGWRHSMALTS 291
Query: 350 S--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
S + WG ++G++G G P +V+ V ++CG+ H++ + +R NV
Sbjct: 292 SGQLLGWGWNKFGQIGVG--NNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYS 349
Query: 408 RLDQLDVYDGKASSQ--DNEEIDRNSTVPPKKGAAKVSNNSKKRKKS 452
+ A+ Q + E IDRN VP A V +S + +S
Sbjct: 350 -------WGRGANGQLGNGETIDRN--VPTIIEAFSVDGSSGQHIES 387
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 22/285 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L+ P ++ L G+ I+ +A C HC+AV ++ + +WGRN+ G+
Sbjct: 93 WGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIA--CGDSHCLAVTMDSQVLSWGRNQNGE 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + + IK AG H+V +T+DGN +GW ++G LG G +
Sbjct: 151 LGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P V ++ ACG T+ +SS G + G +YGQLGHG
Sbjct: 211 RLLPEKVTVDGDKMAMVACGWRHTICVSSSGG--LYTNGWGKYGQLGHGD---------- 258
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+E PR + AL+ + I +V+ G H++A+ S G + WG+ +G++G D
Sbjct: 259 ----FEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDC 314
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
P +V+ V +IS G ++ +Y WG+ N
Sbjct: 315 CSPMQVNFPHDQKV----QMISCGWRHTIAVTERENVYSWGRGAN 355
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 30/297 (10%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
++ AG SH+V + ++G + GQLG G + + P+ + L ++ CG
Sbjct: 15 RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCG 74
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD T+ S G + + G +G+LGHG D S L P I AL G
Sbjct: 75 ADHTM-ARSESGRDVYSWGWGDFGRLGHG--------DHSDLLI------PHPIKALQGL 119
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV V +WG G LG +D +P+++ +F+ P +
Sbjct: 120 MIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE----IPIKM 175
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +S G LY WG+ N G +D + P+ + + G + + G H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT-VDGDKMAMVACGWRHT 234
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + + G +YG+LG+G + + +P+KV L + V+ G+ HS+ +
Sbjct: 235 ICVSSSGGLYTNGWGKYGQLGHGDF--EDHLVPRKVQALSDKFISQVSGGWRHSMAL 289
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S I
Sbjct: 15 VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVIC 72
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +ED + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 130
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG GT T+DS + P+ I A + +A
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFESVCVKMIA 176
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +P +V + ++ +++ G
Sbjct: 177 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 232
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P + L + + G H + ++
Sbjct: 233 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G SS P +V E + VACG+ H+L + ++ NV
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSS--PGQVSFPEDQKISQVACGWRHTLALSEKKNV 347
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 19/247 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 92 WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 209
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + E + ACG T+ +S + ++ G +YGQLGHG
Sbjct: 210 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 258
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL TI +++ G HT+A+ S+G +Y WG+ +G++G D
Sbjct: 259 -----FEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313
Query: 269 EWVPRRV 275
P +V
Sbjct: 314 HSSPGQV 320
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+T+V V+ G +H+VA+ + + +WG G G+LGH + +D VP + F + +
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAI---TS 69
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + Q+Y W G+L + N D P+P+ L G ++ + G+ H
Sbjct: 70 VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 129
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ E + V +A G H+ + +
Sbjct: 130 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 1 MAELEAEKMVEEETG------KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLV 54
++ +E EKMV G G L G + + +G G + +LV P ++ L
Sbjct: 216 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLV-PHKVEALK 272
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
I ++ G H +A+ EG+ Y WG N+ GQ+G G+ P VS KI +
Sbjct: 273 DSTISQISGGWR--HTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQ 330
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACG 169
G HT+ ++E N ++G GQLG+G I + P + L S+ +A ++
Sbjct: 331 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACKKLESSTA 390
Query: 170 ADFT--VWLSSVEGASIL 185
A F VW+S E +I+
Sbjct: 391 APFAAKVWVSPSERYAIV 408
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 66/355 (18%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT + L V I+ VA HC+A+ +G ++WG E G+LGHG++ DRP ++
Sbjct: 4012 APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE 4071
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
LS + G +H+ +T G+ L +G ++G+LG G ++++P V L+
Sbjct: 4072 ALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4131
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4132 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI--------------PMKIE 4177
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+LAG ++KV CG+ +VA+ G VYTWG G Y RLGH P++V Q ++
Sbjct: 4178 SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII 4237
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
I+ GS++ + G+++ WG + D+
Sbjct: 4238 S----IATGSLHCVACSDSGEVFTWG----DNDE-------------------------- 4263
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G + P+ V L+G H++ V CG H+L +
Sbjct: 4264 ---------------GQLGDGTV--TAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 147/332 (44%), Gaps = 30/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N RGQLG D + PT LS + + G VT DG A G+
Sbjct: 3940 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 3999
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ V L + + A G + LSS + + G + G+LG
Sbjct: 4000 GRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4057
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Y+ RP+ I AL+G ++ +ACG+ H+ + S+G+V TWG G
Sbjct: 4058 HGNRDSYD--------------RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKG 4103
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4104 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4161
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 4162 LGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4219
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4220 DHVRRPKKVAALQGKKIISIATGSLHCVACSD 4251
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 22/294 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G+L CG GR + N+ +P ++ L ++ VA H +A+ ++G
Sbjct: 2942 QDGKLYACGE---GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDG 2998
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ ++WG E G+LGHG+++ ++P ++ L +++ G SH+ +T G +G
Sbjct: 2999 KVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLG 3058
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
++G+LG G +++P V L V ACG+ L E + + G +G+LG
Sbjct: 3059 EYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3118
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E P + L ++++ CG ++A+ G V+TWG G
Sbjct: 3119 RG--------------GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKG 3164
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH + P + + V+ ++ G+++ GQ+Y WG
Sbjct: 3165 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3214
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 170/375 (45%), Gaps = 41/375 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
G L G+ V PT L + +A G S V+ D G+ Y G N R LGH +
Sbjct: 2906 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 2963
Query: 95 KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
+ R V L++Y +KK +G H + +T DG ++G + G+LG G+ +
Sbjct: 2964 NVPTPRQ--VPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3021
Query: 153 PSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + L V ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3022 PKLIESLRTKRVRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DN---------- 3068
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
Q +P+ + L G +V+VACG+ T+ + +G V++WG G +G+LG +
Sbjct: 3069 ---CTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC 3125
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
VP +V+ V+ I G+ S G+++ WGK L + D + P
Sbjct: 3126 SVPHQVERLNSVGVMQ----IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPT 3181
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
P+ L G + + G +H DS + +WG +G+ G G + P V L+
Sbjct: 3182 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTVVNKKPNLVLGLD 3239
Query: 383 GMHVISVACGYGHSL 397
G+ V VACG HS+
Sbjct: 3240 GVFVNRVACGSSHSV 3254
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 34/344 (9%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++ + WG N++ QLG G K++ PT S LS+ K G +V++DG
Sbjct: 2889 EISSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKL 2946
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P V L V + A G + L +++G + + G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMAL-TLDG-KVFSWG 3004
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG +L E +P+ I +L + + +ACG++H+ A+ S G
Sbjct: 3005 EGEDGKLGHGN-----------RLTLE---KPKLIESLRTKRVRDIACGSSHSAAITSSG 3050
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH + + P+ V Q + V+ + + + C G ++
Sbjct: 3051 ELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVV--QVACGSRDAQTLCLTEEGLVFS 3108
Query: 309 W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G + P + L+ + ++ G S + +WG Y
Sbjct: 3109 WGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3168
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G + P + L G VI VA G H L + D V
Sbjct: 3169 LGHG--TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV 3210
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 21/268 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P L GV + +AA C H + + ++WG + G+LGHGD + ++ PT++
Sbjct: 555 IAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMI 614
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L + ++ G S++ +T G +G +G+LG G+ +++ P+ V+ L S +V
Sbjct: 615 VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKV 674
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A G+ + + + G +G+LG+G+ N P P I
Sbjct: 675 VDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCN--------------GSPIPVQI 720
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L + ++ G+ +VA+ G +YTWG G GRLGH + VP+ V + +
Sbjct: 721 DTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKI 778
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
A ++ GS + G+LY WG+
Sbjct: 779 ----ADVAVGSAHCLALTSSGELYGWGR 802
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I L + + + CG +++ A+ G ++TWG G YGRLGH D+ VP +V
Sbjct: 610 HPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQAL 669
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKN---NGDDWMYPKPLMDLSG 330
+ V+ + + +G +S C G L+ WG KL N NG P P+ +
Sbjct: 670 KSYKVV--DVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS----PIPVQIDTL 723
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
N+ + SG+ + D + +WG G LG+G + S +PK V LEG + V
Sbjct: 724 VNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHG--NSEHSNVPKLVRALEGKKIADV 781
Query: 390 ACGYGHSLVI 399
A G H L +
Sbjct: 782 AVGSAHCLAL 791
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + +A G S H + +G TWG+ G+LGHGD + +P +V
Sbjct: 4067 PKLIEALSGIGVIDIACG--SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4124
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L Y+ G+G + T+ +T+D N ++G +G+LG G P + L V
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4184
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
CG+ F+V L+ S+ G Y +LGHG + L
Sbjct: 4185 IKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4242
Query: 213 ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
A RPR + +L G+ IVKV CG+ HT+A+
Sbjct: 4243 SLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302
Query: 246 S 246
+
Sbjct: 4303 T 4303
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + + C S VA+ G YTWG+ + +LGHG+ RP V+
Sbjct: 4173 PMKIESLAGLGV--IKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAA 4230
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V ++ G +G N GQLG G++ P V+ L +
Sbjct: 4231 LQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVK 4290
Query: 166 TACGADFTVWLSSVE 180
CG+ T+ LS+ +
Sbjct: 4291 VICGSAHTLALSTYQ 4305
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
VA+ +G YTWG+ G+LGHG+ + P +V L KI G +H + +T G
Sbjct: 737 VALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGE 796
Query: 131 SLAFGWNKHGQL-GSGSIRNEIEPSPVRCL--VSEVTATACG-ADFTVWLSS 178
+G N + Q+ SG R+ I SP+ ++ CG A VW S
Sbjct: 797 LYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLRISGMTCGAAQSIVWCHS 848
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 129/269 (47%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ +PT + + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP
Sbjct: 4008 SVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPR 4067
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+ L ++ AG +H+ +T G ++G ++G+LG G ++ +P V L
Sbjct: 4068 AIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGY 4127
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VT ACG+ L + S+ + G YG+LG G + P
Sbjct: 4128 RVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV--------------PM 4173
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I AL G ++KV CG+ +VA+ G VYTWG G Y RLGH + PRR Q
Sbjct: 4174 KIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGK 4233
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ I+ GS++ G++Y WG
Sbjct: 4234 KIVS----IACGSLHCVACTDAGEVYTWG 4258
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 19/260 (7%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L ++I +AA HC+A+ EG Y+WG + G+LGHGD + D P +++EL +
Sbjct: 473 LADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSV 532
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGAD 171
G H+ +T G +G G+LG GS + + P+ V L+ V ACG+
Sbjct: 533 VNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSG 592
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ + S+ + G +YG+LG G E P+ + L G +
Sbjct: 593 DAQTIALADTGSVYSWGDGEYGKLGRG--------------GSEGCKAPKLVDKLQGLDV 638
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+V CG ++ AV G V+TWG G +LGH ++ PR+V+ +V +S
Sbjct: 639 TRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHV----TSLS 694
Query: 292 AGSVNSSCTAGGGQLYMWGK 311
GS + T G+L WG+
Sbjct: 695 LGSHHCLATTEEGELLSWGR 714
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 21/294 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G+L CG +G G GN+ P +L L I+ VA H +A+ V+G
Sbjct: 2964 QDGKLFACGEATNGRLGL--GISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDG 3021
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ ++WG + G+LGH ++ D+P ++ L +++ G SH+ + +G+ +G
Sbjct: 3022 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLG 3081
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
++G+LG G ++ P V+ L + V A G+ L+ + ++ + G +G+LG
Sbjct: 3082 EYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG 3141
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E P I L G + ++ CG ++A+ G V+TWG G
Sbjct: 3142 RG--------------GSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH P+ V+ + V ++ G+++ GQ+Y WG
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETLKGKKV----THVAVGALHCLSVLDNGQVYAWG 3237
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 156/358 (43%), Gaps = 35/358 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAG 118
V A V C D++ + + WG N++ QLG G KI+ P I LS K + G
Sbjct: 2898 VMAKKVKCGSGVKDIQTQVFVWGLNDKDQLGGPKGSKIK--TPGINETLSTLKCVQIVGG 2955
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL---VSEVTATACGADFTV 174
VT+DG A G +G+LG G S N +P + L V + A G +
Sbjct: 2956 SKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAM 3015
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L +V+G + + G G+LGH + + +PR I AL + + +
Sbjct: 3016 AL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALRSKRVRDI 3059
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG +H+ A+ S G +YTWG G YGRLGH + + P+ V + V+ + + +
Sbjct: 3060 ACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVI--QVALGSRD 3117
Query: 295 VNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+ G +Y W GKL G + P P+ L+G + ++ G
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK 3177
Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S + +WG Y LG+G P+ V+ L+G V VA G H L ++D V
Sbjct: 3178 SGQVWTWGKGDYFRLGHGTDAHVRK--PQLVETLKGKKVTHVAVGALHCLSVLDNGQV 3233
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 155/350 (44%), Gaps = 37/350 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--A 117
+ G S CV D G+ + G G+LG G +P ++ LS+Y IKK +
Sbjct: 2952 IVGGSKSLFCVTQD--GKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHS 3009
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G H + +T DG ++G G+LG S N +P + L S+ V ACG + +
Sbjct: 3010 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAI 3069
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + GL +YG+LGHG DN Q RP+ + AL G+ +++VA
Sbjct: 3070 --ISNGDLYTWGLGEYGRLGHG-DNT-------------TQLRPKLVKALEGQRVIQVAL 3113
Query: 237 GTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
G+ T+A+ G VY+WG G +G+LG + VP ++ V I G+
Sbjct: 3114 GSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV----CQIECGA 3169
Query: 295 VNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGAD 348
S GQ++ WGK +G D KP + L G + + G +H D
Sbjct: 3170 QFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLD 3229
Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+ + +WG +G+ G + P V LEG + VACG HS+
Sbjct: 3230 NGQVYAWGDNDHGQQGNS--TTTVNRKPALVQGLEGCKISRVACGSSHSI 3277
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 30/335 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ + WG N RGQLG + + P L+ + + G +T DG A G+
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ + + A G + LS+ EG + + G + G
Sbjct: 3996 GAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSA-EG-EVYSWGEGEDG 4053
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPRAI +L G+ +V +A G H+ + S G +Y+W
Sbjct: 4054 KLGHGNRSPCD--------------RPRAIESLRGKEVVDIAAGGAHSACITSTGELYSW 4099
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD + V + +G + C ++ W
Sbjct: 4100 GKGRYGRLGHGDSEDQTKPKLVDALKGYRV--TDVACGSGDAQTLCITDDDSVWSWGDGD 4157
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L G + ++ G+ S + +WG Y LG+G
Sbjct: 4158 YGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4216
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ P++ L+G ++S+ACG H + D
Sbjct: 4217 -TEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTD 4250
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L +R +A G H A+ G YTWG E G+LGHGD + RP +V
Sbjct: 3045 PRLIEALRSKRVRDIACG--GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKA 3102
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L ++ + G + T+ +T+ G ++G G+LG G P P+ L V
Sbjct: 3103 LEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV 3162
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CGA F++ L+ + + G Y +LGHGTD +P+ +
Sbjct: 3163 CQIECGAQFSLALT--KSGQVWTWGKGDYFRLGHGTDAHVR--------------KPQLV 3206
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
L G+ + VA G H ++V G VY WG +G+ G+
Sbjct: 3207 ETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGN 3246
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 44/350 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
+ C S + + GR Y + Q H +S L+ +I K A
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHE----------ISTLADIEIIKLAAHS 485
Query: 120 --SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
SH + +T +G+ ++G G+LG G P + L + V ACG+ + +
Sbjct: 486 EGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAI 545
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
++ + G +G+LG G+ + T P ++ L G T+V VAC
Sbjct: 546 TA--SGELFTWGRGSFGRLGLGSTEDILT--------------PALVSGLLGVTVVDVAC 589
Query: 237 GTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
G+ T+A+ G VY+WG G YG+LG + P+ VD Q +V + G
Sbjct: 590 GSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDV----TRVYCGP 645
Query: 295 VNSSCTAGGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
S+ G ++ WG KL + ++ + +P+ + L+G ++ + G+ H +
Sbjct: 646 QYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE 705
Query: 349 S-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+SWG G+LG G G K A P L G +I + C +
Sbjct: 706 EGELLSWGRNDKGQLGEGHTGLK--AEPAFAASLLGKCIIGITCSSAQTF 753
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 211 KLAYEAQPRP-RAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
K+ A+P+ I+ LA I+K+A + +H +A+ S+G VY+WG G +G+LGH +
Sbjct: 457 KMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTV 516
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMY 321
P ++ +V+ ++ GS +S+ G+L+ WG+ + +D +
Sbjct: 517 TCDSPMLINELHGKSVVN----VACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILT 572
Query: 322 PKP---LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKK 377
P L+ ++ ++ C SG+ AD+ S SWG +YG+LG G G + PK
Sbjct: 573 PALVSGLLGVTVVDVAC-GSGDAQTIALADTGSVYSWGDGEYGKLGRG--GSEGCKAPKL 629
Query: 378 VDILEGMHVISVACGYGHSLVI 399
VD L+G+ V V CG +S +
Sbjct: 630 VDKLQGLDVTRVYCGPQYSAAV 651
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P + L+GV + VA G +A+ G Y+WG E G+LG G P
Sbjct: 569 DILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPK 628
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+V +L + + G ++ V ++G +G + +LG G+ + P V L
Sbjct: 629 LVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGK 688
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VT+ + G+ L++ E +L+ G GQLG G + P
Sbjct: 689 HVTSLSLGSHHC--LATTEEGELLSWGRNDKGQLGEGHTG--------------LKAEPA 732
Query: 222 AIAALAGETIVKVACGTNHTVA 243
A+L G+ I+ + C + T A
Sbjct: 733 FAASLLGKCIIGITCSSAQTFA 754
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V+ C S HCVA G YTWG N+ GQLG G RP +V+ L KI + G
Sbjct: 4234 KIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACG 4293
Query: 119 RSHTV 123
+H++
Sbjct: 4294 SAHSL 4298
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + + C S VA+ G YTWG+ + +LGHG +
Sbjct: 4163 RGGSDGCKV-PMKIDALQGLGV--IKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTED 4219
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP + L KI G H V T+ G +G N GQLG G+ P V
Sbjct: 4220 HIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4279
Query: 157 RCLV-SEVTATACGA 170
L ++ ACG+
Sbjct: 4280 AALQGKKINRVACGS 4294
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P + LS + + G + VT DG A
Sbjct: 4289 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4348
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 4349 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4406
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L Y+ RP+ I L G IV +ACG +H+ A+ S G++
Sbjct: 4407 DDGKLGHGN-----------RLMYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4452
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4453 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4510
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S I +WG Y LG
Sbjct: 4511 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4570
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4571 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4610
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
+T + A GR +++ PT L + V ++ VA HC+A+ EG Y+WG +
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP ++ EL +I G H+ +T G +G ++G+LG G
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4468 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4527
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G +YTWG G Y RLGH
Sbjct: 4528 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4573
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ G+++ WG
Sbjct: 4574 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4614
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ +A H +A+ +G+ ++WG E G+LGHG+ + D+
Sbjct: 3329 DSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDK 3388
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ +T G +G ++G+LG G +++P V+ LV
Sbjct: 3389 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLV 3448
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ ++ S+ + G +G+LG G+D Y
Sbjct: 3449 GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT-------------- 3494
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I L G +V++ CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3495 -PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3553
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ V+ ++ G+++ GQ+Y WG
Sbjct: 3554 RGKKVVH----VAVGALHCLAVTDTGQVYAWG 3581
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I +A G H A+ G YTWG+ G+LGHGD + P +V
Sbjct: 4422 PKLIEELLGTEIVDIACG--GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4479
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4480 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4539
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ +I G Y +LGHGTD+ RPR +
Sbjct: 4540 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4583
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4584 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4639
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 36/346 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P ++ LS+Y IKK +G H + +T+D
Sbjct: 3305 FVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQD 3364
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 3365 GKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTW 3422
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG D++ ++ +P+ + +L G+ +++VACG+ T+A+
Sbjct: 3423 GLGEYGRLGHG--------DTATQM------KPKLVQSLVGQRVIQVACGSRDAQTMALT 3468
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G VY+WG G +G+LG + P +D V+ I G+ S G+
Sbjct: 3469 ADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGE 3524
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQ 358
++ WGK +G+D KP + L G + + G +H D+ + +WG
Sbjct: 3525 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3584
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR 402
+G+ G G + P V L+ V V+CG HS+ V+ D+
Sbjct: 3585 HGQQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3628
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 149/340 (43%), Gaps = 38/340 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 3262 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3319
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP + L + + A G + L+ + I + G + G+
Sbjct: 3320 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALT--QDGKIFSWGEGEDGK 3377
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG +SV L +PR I +L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 3378 LGHG---------NSVSLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3423
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V V+ ++ GS ++ A G +Y W
Sbjct: 3424 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3479
Query: 310 --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y L+D L+G + ++ G + +WG Y LG+G
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P V+ L G V+ VA G H L + D V
Sbjct: 3540 --NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3577
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
+AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 4338 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4397
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ P + L+ +E+ ACG + ++S +
Sbjct: 4398 GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 4455
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q P+ + AL ++ VACG+ T+ V
Sbjct: 4456 GKGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4501
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P +++ V+ E GS S G
Sbjct: 4502 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGA 4557
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4558 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4617
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4618 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4654
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 25/311 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ + +A+ H +A+ + Y+WG + G+LGHGD++ D P +V
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 553
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I G +++ V++ +G +G +G+LG G+ N + P+ V L V
Sbjct: 554 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVH 613
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + P+ +
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 659
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L + KV CG + A+ + G VYTWG G RLGH ++ P+ ++V V
Sbjct: 660 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKV-- 717
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD----WMYPKPLM--DLSGWNLRCMDSG 339
+ G+ + +Y WG+ D + P+P + LSG N+ + G
Sbjct: 718 --KELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACG 775
Query: 340 NMHHFVGADSS 350
F S+
Sbjct: 776 LTQSFAWCTSA 786
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
P+ + + + + +A ++ H +A+ VY+WG G GRLGH R DE P+ V
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDE--PKLV 551
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
+ N+ I+ GS S+ + G+LY WG+ N D+ + P + L+
Sbjct: 552 EALVDKNI----TFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALN 607
Query: 330 GW---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G ++ C + V A SWG YG+LG G G S PK VD L ++V
Sbjct: 608 GHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 665
Query: 387 ISVACG 392
V CG
Sbjct: 666 AKVYCG 671
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + + C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 4528 PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAA 4585
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V T+ G +G N GQLG G+ P V L ++T
Sbjct: 4586 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITR 4645
Query: 166 TACGADFTVWLSSVEGA 182
ACG+ T+ S+++
Sbjct: 4646 VACGSAHTLAWSTMKAT 4662
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 95/251 (37%), Gaps = 33/251 (13%)
Query: 8 KMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL---------------DGNLVSPTRLRP 52
K+VE +K + CGST + AV G L N++ PT +
Sbjct: 549 KLVEALV--DKNITFIACGST-YSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA 605
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L G + VA G + V G ++WG G+LG G P IV +L +
Sbjct: 606 LNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINV 665
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
K G + +T G +G + +LG G+ + P + L ++ C +F
Sbjct: 666 AKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNF 725
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
V L+ E + G YGQ+ D T P P L+G+ I+
Sbjct: 726 HV-LALTEDQLVYGWGRNDYGQI----DPALGT----------VVPEPTLCPTLSGKNII 770
Query: 233 KVACGTNHTVA 243
+ACG + A
Sbjct: 771 GLACGLTQSFA 781
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 67/227 (29%)
Query: 241 TVAVDSKGYVYTW----------------------------------------------- 253
T++ D G +Y W
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4344
Query: 254 -----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G+G GRLG VP ++ Q +V + +++G + + G +Y
Sbjct: 4345 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQ--HVFVKKVAVNSGGKHCLALSSEGHVYS 4402
Query: 309 WGKLKN----NGDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYG 360
WG+ + +G+ MY PK + +L G + + G HH S+ +WG +YG
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGG-HHSAAITSAGWLYTWGKGRYG 4461
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG--HSLVIVDRTNV 405
LG+G + PK V+ L+ VI VACG G +L + D NV
Sbjct: 4462 RLGHG--DSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4506
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L GV I +A C HC+AV V G ++WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 160
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + ++K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + + + ACG T+ +SS SI G +YGQLGHG
Sbjct: 221 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGD--------- 269
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL TI +++ G HT+A+ + G +Y WG+ +G++G + +D
Sbjct: 270 -----FEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 324
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P +V+ V+ ++ G ++ ++ WG+
Sbjct: 325 HCSPVQVNFPNEQKVVQ----VACGWRHTLALTEAKNVFSWGR 363
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 41/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ G +WGR E GQLGHGD R PT+++ + + G
Sbjct: 22 VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 77
Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
G HT +++ L ++GW G+LG G+ + P P++ L +T ACG
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 137
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
L+ + + G Q GQLG G NT+DS + P+ I A G
Sbjct: 138 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 181
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ +A G HT AV G +Y WG+G YG LG ++ D +P +V ++ +
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 237
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
++ G ++ + G +Y +G K +GD D + P L L + + G H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 297
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ AD WG ++G++G G + P +V+ V+ VACG+ H+L + +
Sbjct: 298 MALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355
Query: 403 TNV 405
NV
Sbjct: 356 KNV 358
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 149/308 (48%), Gaps = 33/308 (10%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
V E + + AG SH+V + G ++G + GQLG G + P+ + +
Sbjct: 14 VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 73
Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ CGAD T S E + + G +G+LGHG N+ D + QP
Sbjct: 74 PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHG-----NSSD-----VFNPQP 122
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
I AL G I ++ACG +H +AV G+V++WG G+LG +D +P+++ F
Sbjct: 123 ----IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF 178
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWN 332
+ V +I+AG+ +++ G LY WG+ N G DD + P+ + ++G
Sbjct: 179 EGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H V + S ++G ++YG+LG+G + + +P K++ L+ + ++
Sbjct: 235 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDTTISQISG 292
Query: 392 GYGHSLVI 399
G+ H++ +
Sbjct: 293 GWRHTMAL 300
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEA 288
++V ++ G +H+VA+ S G V +WG G G+LGH + +D VP + F
Sbjct: 21 SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + QLY W G+L + N D P+P+ L G + + G+ H
Sbjct: 81 VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 140
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ EG+ V +A G H+ + +
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTE 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + +LV P +L L I ++ G H +A+ +G+ Y WG N+ GQ+G GD
Sbjct: 268 GDFEDHLV-PHKLEALKDTTISQISGGWR--HTMALAADGKLYGWGWNKFGQVGVGDNED 324
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P V+ ++ K+ + G HT+ +TE N ++G GQLG G I + P +
Sbjct: 325 HCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 384
Query: 158 CLVSEVTAT-------ACGADFTVWLSSVEGASIL 185
L S+ +A A VW+S E +I+
Sbjct: 385 ALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIV 419
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 19/265 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L + V I+ VA HC+A+ EG Y+WG + G+LGHG+K+ DRP ++ +
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L +I G H+ +T G +G ++G+LG G +++ P V L +V
Sbjct: 63 LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVID 122
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + P I +
Sbjct: 123 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PLKIDS 168
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q ++
Sbjct: 169 LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIIS 228
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ + G+++ WG
Sbjct: 229 ----IATGSLHCVACSDKGEVFTWG 249
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN VS P + L+GV+I V C H A+ G YTWG+ G+LGHGD +
Sbjct: 49 GNKVSYDRPKLIEDLLGVEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 106
Query: 99 DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP +V L YK+ G+G + T+ VT+D N ++G +G+LG G P +
Sbjct: 107 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 166
Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L V CG+ F+V L+ ++ G Y +LGHGTD+
Sbjct: 167 DSLAGLGVVKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR----------- 213
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RPR +AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V
Sbjct: 214 ---RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 270
Query: 276 DVFQ 279
Q
Sbjct: 271 HALQ 274
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 38/311 (12%)
Query: 101 PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
PT++ + IKK +G H + ++ +G+ ++G G+LG G+ + P +
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L+ E+ ACG + ++S + G +YG+LGHG ++ Q
Sbjct: 63 LLGVEIVDIACGGHHSAAITS--AGWLYTWGKGRYGRLGHGDSDD--------------Q 106
Query: 218 PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP+ + AL ++ VACG+ T+ V V++WG G YG+LG VP ++
Sbjct: 107 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 166
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLS 329
D V+ E GS S G +Y WGK L + DD + P+ + L
Sbjct: 167 DSLAGLGVVKVEC----GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ 222
Query: 330 GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM--PKKVDILEGMHV 386
G + + +G++H +D +WG G+LG G +SA+ P+ V L+G +
Sbjct: 223 GKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG----TTSALHRPRLVHALQGKKI 278
Query: 387 ISVACGYGHSL 397
VACG H+L
Sbjct: 279 TRVACGSAHTL 289
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG Y+ RP+ I L G IV +ACG +H+ A+ S G++YT
Sbjct: 44 GKLGHGNKVSYD--------------RPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYT 89
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG G YGRLGH + D+ P+ V+ Q V+ + +G + C ++ WG
Sbjct: 90 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWGDG 147
Query: 311 ---KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
KL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 148 DYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 207
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P+KV L+G +IS+A G H + D+ V
Sbjct: 208 --TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 245
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-I 290
V V+ G H +A+ S+G+VY+WG G G+LGH + P+ ++ ++L E V I
Sbjct: 17 VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIE-----DLLGVEIVDI 71
Query: 291 SAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPK---PLMDLSGWNLRCMDSGNM 341
+ G +S+ G LY WGK + + DD + PK L D ++ C
Sbjct: 72 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQ 131
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V D + SWG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 132 TLCVTDDDNVWSWGDGDYGKLGRG--GSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 187
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 154 RGGSDGCKV-PLKIDSLAGLGV--VKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 210
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G+ P V
Sbjct: 211 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 270
Query: 157 RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLPQ 191
L ++T ACG+ T+ W ++ S + A P
Sbjct: 271 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASTPM 307
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L GV I +A C HC+AV V G ++WGRN+ GQ
Sbjct: 108 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 165
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + ++K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 166 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + + + ACG T+ +SS SI G +YGQLGHG
Sbjct: 226 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGD--------- 274
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL TI +++ G HT+A+ + G +Y WG+ +G++G + +D
Sbjct: 275 -----FEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 329
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P +V+ V+ ++ G ++ ++ WG+
Sbjct: 330 HCSPVQVNFPNEQKVVQ----VACGWRHTLALTEAKNVFSWGR 368
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 41/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ G +WGR E GQLGHGD R PT+++ + + G
Sbjct: 27 VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 82
Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
G HT +++ L ++GW G+LG G+ + P P++ L +T ACG
Sbjct: 83 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 142
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
L+ + + G Q GQLG G NT+DS + P+ I A G
Sbjct: 143 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 186
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ +A G HT AV G +Y WG+G YG LG ++ D +P +V ++ +
Sbjct: 187 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 242
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
++ G ++ + G +Y +G K +GD D + P L L + + G H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 302
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ AD WG ++G++G G + P +V+ V+ VACG+ H+L + +
Sbjct: 303 MALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360
Query: 403 TNV 405
NV
Sbjct: 361 KNV 363
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 149/308 (48%), Gaps = 33/308 (10%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
V E + + AG SH+V + G ++G + GQLG G + P+ + +
Sbjct: 19 VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 78
Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ CGAD T S E + + G +G+LGHG N+ D + QP
Sbjct: 79 PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHG-----NSSD-----VFNPQP 127
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
I AL G I ++ACG +H +AV G+V++WG G+LG +D +P+++ F
Sbjct: 128 ----IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF 183
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWN 332
+ V +I+AG+ +++ G LY WG+ N G DD + P+ + ++G
Sbjct: 184 EGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 239
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H V + S ++G ++YG+LG+G + + +P K++ L+ + ++
Sbjct: 240 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDTTISQISG 297
Query: 392 GYGHSLVI 399
G+ H++ +
Sbjct: 298 GWRHTMAL 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
+ +++ E A+ ++V ++ G +H+VA+ S G V +WG G G+LGH + +
Sbjct: 4 TGMEMEVEVAGDDEAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAE 63
Query: 268 DEWVPRRVD-VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWM 320
D VP + F VI ++ + QLY W G+L + N D
Sbjct: 64 DRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVF 123
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P+P+ L G + + G+ H V SWG Q G+LG G + S +P+K+
Sbjct: 124 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQ 181
Query: 380 ILEGMHVISVACGYGHSLVIVD 401
EG+ V +A G H+ + +
Sbjct: 182 AFEGVRVKMIAAGAEHTAAVTE 203
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + +LV P +L L I ++ G H +A+ +G+ Y WG N+ GQ+G GD
Sbjct: 273 GDFEDHLV-PHKLEALKDTTISQISGGWR--HTMALAADGKLYGWGWNKFGQVGVGDNED 329
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P V+ ++ K+ + G HT+ +TE N ++G GQLG G I + P +
Sbjct: 330 HCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 389
Query: 158 CLVSEVTAT-------ACGADFTVWLSSVEGASIL 185
L S+ +A A VW+S E +I+
Sbjct: 390 ALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIV 424
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 132/266 (49%), Gaps = 17/266 (6%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCV-AVDVEGR----CYTWGRNERGQLGHGDKIQRDRP 101
P +R L +R V+ C H V A + +G YT+GRN+ GQLGH D I R P
Sbjct: 563 PKIVRSLENRIVRLVS--CSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVP 620
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V + + G+ HT+VVT G + AFG N +GQLG S+ N++ P VR +
Sbjct: 621 QHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLE 680
Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
E CG T+ L S GA + G YGQLG G N +T ++++L +
Sbjct: 681 KHECLEIRCGYYHTIVLCS--GAHLFAFGRNDYGQLGLGRANASST--ANLQLQQQRFSY 736
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
R I L G+ IV+ ACG HTVAV G +Y +G +G+LG + + P +D F
Sbjct: 737 ARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFV 796
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQ 305
V A+++AG ++ GG +
Sbjct: 797 GKRV----ALVAAGFYHTVVLTGGKE 818
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 46/357 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA--GRSHTVVVT 126
H +A+ V+G+ T G N+ GQ G G + + ++ I + A G HT++VT
Sbjct: 477 HTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVT 536
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGA--- 182
DG + G+N GQLG G+ +E P VR L + + +C TV +G+
Sbjct: 537 MDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQ 596
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ G YGQLGH ++ D V P+ + A+ + +V VACG HT+
Sbjct: 597 YLYTFGRNDYGQLGHN-----DSIDRKV---------PQHVEAMGDQHVVSVACGQYHTM 642
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTA 301
V + G + +G YG+LG +++ VP +V +++ L I G ++
Sbjct: 643 VVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLE----IRCGYYHTIVLC 698
Query: 302 GGGQLYMWGK------------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G L+ +G+ L+ + Y + + +L G ++ G H
Sbjct: 699 SGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHT 758
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D+ + +G +G+LG G ++ P +D G V VA G+ H++V+
Sbjct: 759 VAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFP--IDDFVGKRVALVAAGFYHTVVL 813
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 158/352 (44%), Gaps = 54/352 (15%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++ G+N G+LGHGD R + L + +I + GAG HT+ +T DG L G+N +
Sbjct: 436 WSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYNDN 495
Query: 140 GQLGSG---SIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ G G + + E P +S+V A G + T+ L +++G + G GQL
Sbjct: 496 GQCGQGGTARVSHLCEMPKMGDNAISQVHAYN-GCEHTI-LVTMDGRAA-TCGYNYRGQL 552
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV---DSKG--YV 250
GHG NT SV P+ + +L + V+C HTV D G Y+
Sbjct: 553 GHG-----NTASESV---------PKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYL 598
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YT+G YG+LGH + D VP+ V+ +V+ ++ G ++ G+ + +G
Sbjct: 599 YTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVS----VACGQYHTMVVTATGKAFAFG 654
Query: 311 K--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHFVGAD-SSCISWGHAQY 359
K G D M + P+ +G +RC G H V + ++G Y
Sbjct: 655 KNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRC---GYYHTIVLCSGAHLFAFGRNDY 711
Query: 360 GELGYGPYGQKSSA----------MPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G S+A + ++ LEG ++ ACG H++ + D
Sbjct: 712 GQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSD 763
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 32/361 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H V GR Y +G N+ GQLG G ++P+ V L K++K GR+
Sbjct: 41 VEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRN 100
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
HT+V +E G +FG N+ GQLG NE+ P + + E+ ACG ++ LS
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILS-- 158
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E + G GQLG G + E N+ +K E +V V+CG
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVE-NSLPKKLKFKKE---------------VVSVSCGYY 202
Query: 240 HTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT V G++YT+G G+LG + + VP+ V + N+ +S G+ ++
Sbjct: 203 HTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEY---ISVSCGARHT 259
Query: 298 SCTAGGGQLYMWGKLKN----NGDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADS- 349
G Y WG +G + PK + LSG + G H V +S
Sbjct: 260 VAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESG 319
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
++G ++G+LG G +S P + +V+ V+CG H+LV+ N + +
Sbjct: 320 KVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFV 379
Query: 410 D 410
D
Sbjct: 380 D 380
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 108 SKYKIKKAGA-----GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+K+ IK G G H+ VVTE G FG N GQLG G ++ +PS V+ L E
Sbjct: 31 NKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPE 90
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + T+ S E + + G + GQLGH + E + P+
Sbjct: 91 KVRKVACGRNHTIVYS--ESGKLFSFGCNEDGQLGH--------------VDKENELLPK 134
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I ++ I ++ACGT H++ + G VY WG G+LG E+ + +P+++ F++
Sbjct: 135 EIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLK-FKKE 193
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG------------KLKNNGDDWMYPKPLMDLS 329
V +S G +++ G LY +G +L N P +
Sbjct: 194 VV-----SVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDE 248
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
++ C G H + C +WG G+LG+G + + PK++ L G IS
Sbjct: 249 YISVSC---GARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNE-PKQIKKLSGQKCIS 304
Query: 389 VACGYGHSLVIVD 401
V+CG H+ V+ +
Sbjct: 305 VSCGESHTAVVTE 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAG 118
+++ C + H VA+ +G CY WG +GQLGHG K ++ + P + +LS K G
Sbjct: 249 YISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCG 308
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPV-RCLVSEVTATACGADFTVW 175
SHT VVTE G FG +HG+LG G S N +P + R V +CG T+
Sbjct: 309 ESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLV 368
Query: 176 LS 177
L+
Sbjct: 369 LA 370
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 19/265 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+L + V I+ +A HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4537 PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDS 4596
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L ++ AG +H+ +T +G +G ++G+LG G ++ P V L S V
Sbjct: 4597 LRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVD 4656
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4657 MACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PMKIET 4702
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G+ ++KV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4703 LQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVID 4762
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
++ GS++ G+++ WG
Sbjct: 4763 ----VACGSLHCVACTDTGEVFSWG 4783
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 177/389 (45%), Gaps = 50/389 (12%)
Query: 29 CW-----DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
CW D +G KG+ + PT L + + G S CV EG+ Y G
Sbjct: 3468 CWGLNDKDQLGGPKGS---KIKLPTLNDNLSALRCVQIVGGSKSLFCVTQ--EGKVYACG 3522
Query: 84 RNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHG 140
G+LG G P ++ LS+Y IKK +G H++ +T DG ++G G
Sbjct: 3523 EATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDG 3582
Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG S N +P + L S+ V ACG+ + ++S + GL +YG+LGHG
Sbjct: 3583 KLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITS--NGDLYTWGLGEYGRLGHG- 3639
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGG 257
DN Q +P+ + ALA E +V+VACG+ T+A+ +G VY+WG G
Sbjct: 3640 DNT-------------TQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGD 3686
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
+G+LG + VP VD + V I G+ S GQ++ WGK
Sbjct: 3687 FGKLGRGGSEGCNVPHEVDRLRDQKV----CQIECGAQFSLALTKSGQVWTWGKGDYFRL 3742
Query: 314 NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
+G D KP + L G + + G +H DS +WG +G+ G G
Sbjct: 3743 GHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNG----- 3797
Query: 371 SSAMPKK--VDILEGMHVISVACGYGHSL 397
++ + +K + +LEG + VACG HS+
Sbjct: 3798 TTTVNRKPALVVLEGYKISKVACGSSHSI 3826
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 32/345 (9%)
Query: 19 GGELLFCGS------TCWDAVGRRKG--ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
G + LFC + C +A R G G + P ++ L I+ VA H
Sbjct: 3505 GSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHS 3564
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
+A+ +G+ ++WG + G+LGH + D+P ++ L +++ G SH+ +T +G+
Sbjct: 3565 LALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGD 3624
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
+G ++G+LG G +++P V+ L E V ACG+ L+ + + + G
Sbjct: 3625 LYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGD 3684
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
+G+LG G N P + L + + ++ CG ++A+ G
Sbjct: 3685 GDFGKLGRGGSEGCNV--------------PHEVDRLRDQKVCQIECGAQFSLALTKSGQ 3730
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+TWG G Y RLGH P+ V+ + ++ ++ G+++ GQ++ W
Sbjct: 3731 VWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVH----VAVGALHCLAVTDSGQVFAW 3786
Query: 310 GK----LKNNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHFVGADS 349
G + NG + KP L+ L G+ + + G+ H A +
Sbjct: 3787 GDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSHSIAWATT 3831
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 19/244 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G ++WG + G+LGHGD + P +++ LS ++ K G S++V +T +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G G+LG GS ++ P ++ + ACG+ L+ + ++ +
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSW 749
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G ++ T P+ I L G+ +V+V CG ++A+
Sbjct: 750 GDGDYGKLGRGGNDGCKT--------------PKVIEKLMGQDVVRVYCGNQFSMALTKS 795
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VYTWG G RLGH + P++++ V I+ GS++ G+LY
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKV----KDIAIGSLHCMAITEDGELY 851
Query: 308 MWGK 311
WG+
Sbjct: 852 GWGR 855
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 30/339 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ + WG N RGQLG D + +P L+ + + G VT +G A G+
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520
Query: 137 ---NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+ G G+ S+ + + ++ + + A G + LS+ EG + + G + G
Sbjct: 4521 GAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSA-EG-EVYSWGEGEDG 4578
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G+ +V +A G H+ + + G +YTW
Sbjct: 4579 KLGHGNRSPCD--------------RPRVIDSLRGKEVVDIAAGGAHSACITANGELYTW 4624
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ + V+ + +G + C ++ W
Sbjct: 4625 GKGRYGRLGHGDSEDQPRPKLVEALKSYRVV--DMACGSGDAQTLCITDDDNVWSWGDGD 4682
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
GKL G D P + L G + ++ G+ S S +WG Y LG+G
Sbjct: 4683 YGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG- 4741
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P+KV L+ VI VACG H + D V
Sbjct: 4742 -SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEV 4779
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 32/282 (11%)
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSV 179
H + +T DG ++G G+LG G +N EP+ + L +V CG+ ++V L+S
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS- 688
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ + G +G+LGHG+ E Q P + G IV VACG+
Sbjct: 689 -NGEVYSWGKGNFGRLGHGSS--------------EDQTTPMLLKFFKGHRIVDVACGSG 733
Query: 240 --HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
T+AV G VY+WG G YG+LG P+ ++ +V+ + G+ S
Sbjct: 734 DAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVR----VYCGNQFS 789
Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
G +Y WGK N D +PK + LS ++ + G++H + D
Sbjct: 790 MALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGE 849
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
WG + G+LG + P + +EG ++I VACG
Sbjct: 850 LYGWGRNEQGQLGNPSISNFTE--PTLIGGMEGKNIIGVACG 889
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 147/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTED 128
AV EG+ + G G+LG G PT + + IKK +G H + ++ +
Sbjct: 4507 FAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAE 4566
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4567 GEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITA--NGELYTW 4624
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E QPRP+ + AL +V +ACG+ T+ +
Sbjct: 4625 GKGRYGRLGHG--------DS------EDQPRPKLVEALKSYRVVDMACGSGDAQTLCIT 4670
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP +++ Q V+ E GS S G
Sbjct: 4671 DDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVE----CGSQFSVALTKSGS 4726
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L + + G++H D+ SWG
Sbjct: 4727 VYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDND 4786
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L G + VACG HSL
Sbjct: 4787 EGQLGDG--TTNAIQRPRLVASLLGKKINRVACGSAHSL 4823
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG Y+ P I L+G+ + K+ CG++++VA+ S G VY+
Sbjct: 649 GKLGHGD--------------YQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYS 694
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
WG G +GRLGH +D+ P + F+ + ++ + +G + G +Y W
Sbjct: 695 WGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIV--DVACGSGDAQTLAVTDSGAVYSWGDG 752
Query: 310 --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G+D PK + L G ++ + GN S + +WG LG+G
Sbjct: 753 DYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHG 812
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ + PK+++ L V +A G H + I +
Sbjct: 813 --TEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE 846
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHT 122
C S + VA+ G Y+WG+ G+LGHG + P ++ ++I G+G + T
Sbjct: 678 CGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQT 737
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEG 181
+ VT+ G ++G +G+LG G P + L+ +V CG F++ L+ +
Sbjct: 738 LAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALT--KS 795
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
++ G +LGHGT++ P+ I AL+ + + +A G+ H
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHAR--------------HPKQIEALSSKKVKDIAIGSLHC 841
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+ G +Y WG G+LG+ + P + + N++ ++ G +
Sbjct: 842 MAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIG----VACGPTQTFAWT 897
Query: 302 GGGQ 305
GGQ
Sbjct: 898 SGGQ 901
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + L+G D+ V C + +A+ G YTWG+ + +LGHG + P +
Sbjct: 767 TPKVIEKLMGQDV--VRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIE 824
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
LS K+K G H + +TEDG +G N+ GQLG+ SI N EP+ + + + +
Sbjct: 825 ALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNII 884
Query: 165 ATACGADFTV-------WLSSVEGASILNAGLPQYGQL 195
ACG T W+ S I++ + QL
Sbjct: 885 GVACGPTQTFAWTSGGQWIVSSRVPFIVDVCKSTFEQL 922
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P L+ G I VA G +AV G Y+WG + G+LG G P ++
Sbjct: 713 TPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIE 772
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
+L + + G ++ +T+ G +G + +LG G+ + P + L S +V
Sbjct: 773 KLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVK 832
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G+ + ++ E + G + GQLG+ + + + P I
Sbjct: 833 DIAIGSLHCMAIT--EDGELYGWGRNEQGQLGNPSISNFT--------------EPTLIG 876
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ G+ I+ VACG T + W GG + R VP VDV
Sbjct: 877 GMEGKNIIGVACGPTQT---------FAWTSGGQWIVSSR------VPFIVDV 914
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 66/358 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ +PT + L V I+ VA HC+A+ +G ++WG E G+LGHG++ DRP
Sbjct: 4161 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4220
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ LS + G +H+ +T G+ L +G ++G+LG G ++++P V L+
Sbjct: 4221 LIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4280
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
ACG+ L + ++ + G YG+LG G + P
Sbjct: 4281 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PM 4326
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG + KV CG+ +VA+ G VYTWG G Y RLGH P++V Q
Sbjct: 4327 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4386
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
++ I+ GS++ + G+++ WG + D+
Sbjct: 4387 KIIS----IATGSLHCVACSDAGEVFTWG----DNDE----------------------- 4415
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G + P+ V L+G H++ V CG H+L +
Sbjct: 4416 ------------------GQLGDGTV--SAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 146/332 (43%), Gaps = 30/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N RGQLG D + PT LS + + G VT DG A G+
Sbjct: 4092 FGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4151
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ V L + + A G + LSS + + G + G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4209
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Y+ RP+ I +L+G +V +ACG+ H+ + +G+V TWG G
Sbjct: 4210 HGNRDSYD--------------RPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKG 4255
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4256 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4313
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 4314 LGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4371
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
PKKV L+G +IS+A G H + D
Sbjct: 4372 DHVRRPKKVAALQGKKIISIATGSLHCVACSD 4403
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G+L CG GR + N+ +P ++ L ++ VA H +A+ ++G
Sbjct: 3078 QDGKLYACGE---GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ ++WG E G+LGHG+++ ++P ++ L +I+ G SH+ +T G +G
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
++G+LG G +++P V L V ACG+ L E + + G +G+LG
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG 3254
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E P + L G ++++ CG ++A+ G V+TWG G
Sbjct: 3255 RG--------------GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKG 3300
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH + P + + V+ ++ G+++ GQ+Y WG
Sbjct: 3301 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3350
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 151/344 (43%), Gaps = 34/344 (9%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+V + WG N++ QLG G K++ PT S LS+ K G +V++DG
Sbjct: 3025 EVSSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKL 3082
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P V L V + A G + L +++G + + G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMAL-TLDG-KVFSWG 3140
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG +L E +P+ I L + I +ACG++H+ A+ S G
Sbjct: 3141 EGEDGKLGHGN-----------RLTLE---KPKLIETLRTKRIRDIACGSSHSAAITSSG 3186
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH + + P+ V Q + V+ + + + C G ++
Sbjct: 3187 ELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV--QVACGSRDAQTLCLTEDGLVFS 3244
Query: 309 W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G + P + L+G + ++ G + + +WG Y
Sbjct: 3245 WGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYR 3304
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G + P + L G VI VA G H L + D V
Sbjct: 3305 LGHG--TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV 3346
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 41/375 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
G L G+ V PT L + +A G S V+ D G+ Y G N R LGH +
Sbjct: 3042 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 3099
Query: 95 KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
+ P V LS+Y +KK +G H + +T DG ++G + G+LG G+ +
Sbjct: 3100 NV--PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3157
Query: 153 PSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + L + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3158 PKLIETLRTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DN---------- 3204
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
Q +P+ + AL +V+VACG+ T+ + G V++WG G +G+LG +
Sbjct: 3205 ---CTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGC 3261
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
+P +VD V+ I G+ S G+++ WGK L + D + P
Sbjct: 3262 SIPHQVDRLNGVGVMQ----IECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPT 3317
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
P+ L G + + G +H DS + +WG +G+ G G + P V L+
Sbjct: 3318 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLD 3375
Query: 383 GMHVISVACGYGHSL 397
G+ V VACG HS+
Sbjct: 3376 GIFVNRVACGSSHSV 3390
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 19/252 (7%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+AA C H +A+ G Y+WG + G+LGHGD ++ PT ++ L+ ++ G S
Sbjct: 612 LAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSS 671
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSV 179
++ +T G +G +G+LG G+ ++ P+ V L V A G L
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E G +G+LG NE S P + +VKV G+
Sbjct: 732 EAGLAFAWGDGDFGKLG----NESCVGTSV----------PVQVDLPQASCVVKVFSGSQ 777
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
+VA+ +G VYTWG G GRLGH + VP+ V + ++ ++ G +
Sbjct: 778 FSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVD----LAVGLAHCLA 833
Query: 300 TAGGGQLYMWGK 311
G+LY WG+
Sbjct: 834 LTASGELYGWGR 845
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG D+S A+ P IAALA + V CG++++ A+ + G +YT
Sbjct: 639 GRLGHG--------DTS------AKELPTRIAALADRQVTGVFCGSSYSAAITASGELYT 684
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG G YGRLGH +D++VP V + + V+ + G +S C G + WG
Sbjct: 685 WGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV--HVALGCGDAHSLCVTEAGLAFAWGDG 742
Query: 311 ---KLKNNGDDWMYPKPLMDL--SGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL N +DL + ++ + + + +WG G LG+G
Sbjct: 743 DFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHG 802
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ S +PK V LEG ++ +A G H L +
Sbjct: 803 --NSEHSPVPKMVQALEGKKIVDLAVGLAHCLAL 834
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + V C S H + ++G TWG+ G+LGHGD + +P +V
Sbjct: 4219 PKLIESLSGIGV--VDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4276
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L Y+ G+G + T+ +T+D N ++G +G+LG G P + L V
Sbjct: 4277 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4336
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
T CG+ F+V L+ S+ G Y +LGHG + L
Sbjct: 4337 TKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4394
Query: 213 ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
A RPR + +L G+ IVKV CG+ HT+A+
Sbjct: 4395 SLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454
Query: 246 S 246
+
Sbjct: 4455 T 4455
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V G S VA+ G YTWG+ + +LGHG+
Sbjct: 4316 RGGSDGCKV-PMKIESLAGLGVTKVECG--SQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4372
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G++ P V
Sbjct: 4373 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLV 4432
Query: 157 RCLV-SEVTATACGADFTVWLSSVE 180
+ L + CG+ T+ LS+ +
Sbjct: 4433 QSLQGKHIVKVICGSAHTLALSTYQ 4457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 54 VGVDIRFVAAGCV------SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
V V + A CV S VA+ EG YTWG+ G+LGHG+ P +V L
Sbjct: 757 VPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQAL 816
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPV 156
KI G +H + +T G +G N Q+ + R+ I +P+
Sbjct: 817 EGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICPECVTRDPIITAPI 866
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L + VA GC H + V G + WG + G+LG+ + P V
Sbjct: 704 PTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDL 763
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
+ K +G +V +T +G +G G+LG G+ + P V+ L
Sbjct: 764 PQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQAL 816
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4040 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4099
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 4100 SLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4205
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G + KV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4206 SLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4265
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4266 ----AIATGSLHCVCCTEDGEVYTWG 4287
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 25 CGSTCWDAVGRR----KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
C C+ + R A + N + P ++ L +I +AA H +A+ +
Sbjct: 458 CAEKCFLILSRNGKLYTQAYNNNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELF 517
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGW 136
+WG + G+LGHGD + + P +VS LS + K G +++ +T DG +G
Sbjct: 518 SWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGR 577
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+G+LG GS ++ P V L +V +CG+ LS E + + G YG+L
Sbjct: 578 GNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G + T P+ I L IVKV CG+ ++A+ G VY+WG
Sbjct: 638 GRGGSDGCKT--------------PKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGK 683
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G RLGH ++ P+ ++ Q V+ ++ GS + G++Y WG
Sbjct: 684 GDNQRLGHGTEEHVRYPKIMNGLQGKKVVD----VAVGSTHCLALTESGEVYSWG 734
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4025 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4082
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V +A G H+ + + G +YTW
Sbjct: 4083 KLGHGNRSPCD--------------RPRVIESLRGTEVVDIAAGGAHSACITAAGELYTW 4128
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4129 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4186
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4245
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4246 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4273
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
P+ I L G+ + ++ CG ++A+ G V+TW
Sbjct: 3200 ---PQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 47/387 (12%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV EG+ Y G G+L
Sbjct: 2974 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTAEGKVYACGEATNGRL 3028
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3088
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3141
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3142 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-NGDDWMYPK 323
+ +P+ ++ V I G+ S G ++ W K+ + Y
Sbjct: 3193 GSEGCNIPQNIERLNGQAV----CQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXN 3248
Query: 324 PLMDLS------------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
L++L + C ++ + +WG +G+ G G
Sbjct: 3249 YLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNG--TTT 3306
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSL 397
+ P V LEG + VACG HS+
Sbjct: 3307 VNRKPTLVHGLEGQKITRVACGSSHSV 3333
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4011 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4070
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L +EV A G + +++ +
Sbjct: 4071 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITA--AGELYTW 4128
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4129 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4174
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V + GS S G
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGV----TKVECGSQFSVALTKSGA 4230
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4291 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4327
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 134/333 (40%), Gaps = 77/333 (23%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3018
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACGADFTVWLSSVEGASILN 186
A G +G+LG G I + P P + +V +V + G T +V+G + +
Sbjct: 3019 ACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATAL--TVDG-KVFS 3074
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G G+LGH + + +PR I AL + I +ACG++H+ A+ S
Sbjct: 3075 WGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G +YTWG G YGRLGH + + P+ V V + V + +C + Q
Sbjct: 3121 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV-----------IQVACGSRDAQ- 3168
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
L D G + SWG +G+LG G
Sbjct: 3169 -------------------------TLALTDEGLV----------FSWGDGDFGKLGRG- 3192
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + +P+ ++ L G V + CG SL +
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLAL 3224
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
N + P V+ L S + A D +L+ + + + G G+LGHG
Sbjct: 480 NTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHG--------- 530
Query: 208 SSVKLAYEAQPRPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ ++AL+G+ ++ +ACG+ ++ A+ + G +YTWG G YGRLGH
Sbjct: 531 DTVSLE-----EPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGH 585
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+D+ VP V + V+ + +G + GQ++ W GKL G D
Sbjct: 586 GSSEDQTVPMLVTGLKGLKVV--DVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSD 643
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC ++ + D SWG LG+G ++
Sbjct: 644 GCKTPKLIEKLQDLDIVKVRCGSQFSIA--ITKDGQVYSWGKGDNQRLGHG--TEEHVRY 699
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVD 401
PK ++ L+G V+ VA G H L + +
Sbjct: 700 PKIMNGLQGKKVVDVAVGSTHCLALTE 726
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L GV + V G S VA+ G YTWG+ + +LGHG
Sbjct: 4192 RGGSDGCKV-PMKIDSLTGVGVTKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 4309 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPSQVPMEYN 4349
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ Y+WG+ + +LGHG + P I++ L K+
Sbjct: 656 DLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVA 715
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQ 141
G +H + +TE G ++G N Q
Sbjct: 716 VGSTHCLALTESGEVYSWGSNDQCQ 740
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K+V +GK+ G +++ CGST A+ GR + P
Sbjct: 535 LEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G ++V G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
I K G ++ +T+DG ++G + +LG G+ + P + L +V
Sbjct: 655 QDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDV 714
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ + L + G++ N+ ++++ A+P P + L
Sbjct: 715 AVGSTHCL-------------ALTESGEVYSWGSNDQCQHFDTLRI---AKPVPSVLPGL 758
Query: 227 AGETIVKVACGTNHTVA 243
+ IV ++CG + A
Sbjct: 759 DSKHIVGISCGPAQSFA 775
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 53 LVGVDIRFVAAGCVSCHC--------VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
L+ V +RFV G C + + + + Y WG N+ GQ G+G +PT+V
Sbjct: 3255 LIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPTLV 3314
Query: 105 SELSKYKIKKAGAGRSHTVVVT 126
L KI + G SH+V T
Sbjct: 3315 HGLEGQKITRVACGSSHSVAWT 3336
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
A G + K G T + +K V+ WG +LG + VP + NV+
Sbjct: 2942 ASTGSFVRKKTAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2999
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
++ GS + G++Y G+ N + P+ + LS + ++
Sbjct: 3000 Q----VAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3055
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG
Sbjct: 3056 VHSGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 395 HSLVI 399
HS I
Sbjct: 3114 HSAAI 3118
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
+T + AVGR +++ PT L + V ++ VA HC+A+ EG Y+WG +
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP ++ EL +I G H+ +T G +G ++G+LG G
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4128
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P + L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4129 SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4188
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG +VKV CG+ +VA+ G +YTWG G Y RLGH
Sbjct: 4189 --------------PMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4234
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ G+++ WG
Sbjct: 4235 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4275
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P + LS + + G VT DG A
Sbjct: 3950 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 4009
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 4010 TGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4067
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L+Y+ RP+ I L G IV +ACG +H+ A+ S G++
Sbjct: 4068 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4113
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + +D+ P+ ++ Q V+ + +G + C ++ W
Sbjct: 4114 YTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4171
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S I +WG Y LG
Sbjct: 4172 DGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4231
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4232 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4271
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 150/337 (44%), Gaps = 40/337 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 2937 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2994
Query: 138 KHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G+LG G N EP P+ L + +V+ + G L+ + + + G + G
Sbjct: 2995 TNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHA---LALTQDGKVFSWGEGEDG 3051
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG +S+ L +PR I +L + I +ACG+ H+ A+ S G +YTW
Sbjct: 3052 KLGHG---------NSISLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTW 3097
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW-- 309
G G YGRLGH + + P+ V ++ I+ GS ++ A G +Y W
Sbjct: 3098 GLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQ----IACGSRDAQTMALTADGLVYSWGD 3153
Query: 310 ---GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
GKL G D Y L+D L+G + ++ G + +WG Y LG+
Sbjct: 3154 GDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH 3213
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G P V+ L G VI VA G H L + D
Sbjct: 3214 G--NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I V C H A+ G YTWG+ G+LGHGD + P ++
Sbjct: 4083 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA 4140
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4141 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4200
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ +I G Y +LGHGTD+ RPR +
Sbjct: 4201 VKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4244
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4245 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4300
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ V+ H +A+ +G+ ++WG E G+LGHG+ I D+
Sbjct: 3004 DSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDK 3063
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ +T G +G ++G+LG G + +P V+ LV
Sbjct: 3064 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLV 3123
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ + ACG+ ++ + + G +G+LG G+D Y
Sbjct: 3124 GQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT-------------- 3169
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I L G +V++ CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3170 -PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3228
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ V+ ++ G+++ GQ+Y WG
Sbjct: 3229 RGKKVIH----VAVGALHCLAVTDIGQVYAWG 3256
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 36/352 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P + LS+Y IKK +G H + +T+D
Sbjct: 2980 FVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQD 3039
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 3040 GKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTW 3097
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG D++ Q +P+ + +L G+ I+++ACG+ T+A+
Sbjct: 3098 GLGEYGRLGHG--------DTA------TQSKPKLVQSLVGQRIIQIACGSRDAQTMALT 3143
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G VY+WG G +G+LG + P +D V+ I G+ S G+
Sbjct: 3144 ADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGE 3199
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
++ WGK +G+D KP + L G + + G +H D +WG
Sbjct: 3200 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDND 3259
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+G+ G G + P V L+ V V+CG HS+ V+ D+ + +
Sbjct: 3260 HGQQGNG--TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPTINNQ 3309
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 3999 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4058
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P + L+ +E+ ACG + ++S +
Sbjct: 4059 GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 4116
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q P+ I AL ++ VACG+ T+ V
Sbjct: 4117 GKGRYGRLGHG--------DS------EDQLTPKLIEALQDYKVIDVACGSGDAQTLCVT 4162
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P +++ V+ E GS S G
Sbjct: 4163 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVE----CGSQFSVALTRSGA 4218
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4219 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4278
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4279 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4315
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 19/266 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ I +A+ H +A+ + Y+WG + G+LGHGD+ D P ++
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEA 553
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + I G +++ ++ +G +G +G+LG G+ N + P+ V L V
Sbjct: 554 LVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVY 613
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + P+ +
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 659
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L + KV CG + A+ + G VYTWG G RLGH + P+ +D+ + V
Sbjct: 660 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKV-- 717
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
+ G+++ +Y WG+
Sbjct: 718 --KELCVGNLHVLALTEDQLIYGWGR 741
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
P+ + + + I+ +A ++ H +A+ VY+WG G GRLGH R DE P+ +
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDE--PKLI 551
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
+ N+ I+ GS S+ + G+LY WG+ N D+ M P + L+
Sbjct: 552 EALVEKNI----TFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALN 607
Query: 330 GWNL---RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G + C + V A SWG YG+LG G G S PK VD L ++V
Sbjct: 608 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 665
Query: 387 ISVACG 392
V CG
Sbjct: 666 AKVYCG 671
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + V C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 4189 PMKIESLAGLGV--VKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAA 4246
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V T+ G +G N GQLG G+ P V L ++T
Sbjct: 4247 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITR 4306
Query: 166 TACGADFTVWLSSVEGA 182
ACG+ T+ S+++
Sbjct: 4307 VACGSAHTLAWSTMKAT 4323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 29/245 (11%)
Query: 13 ETGKEKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRLRPLVGVDI 58
E EK + CGST A+ GR N++ PT + L G +
Sbjct: 552 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMV 611
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+VA G + V G ++WG G+LG G P IV +L + K G
Sbjct: 612 VYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG 671
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
+ +T G +G + +LG G+ + P + L ++ C + V L+
Sbjct: 672 GQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHV-LAL 730
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E I G YGQ+ D T P P L+G+ ++ +ACG
Sbjct: 731 TEDQLIYGWGRNDYGQI----DPALGT----------VVPEPTLCPTLSGKNVIGLACGP 776
Query: 239 NHTVA 243
+ A
Sbjct: 777 TQSFA 781
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
ST + A GR +++ PT L + V I+ VA HC+A+ EG Y+WG +
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP +V +L +I G H+ +T G +G ++G+LG G
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4107
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4108 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4167
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4168 --------------PLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4213
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ + G+++ WG
Sbjct: 4214 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4254
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P LS + + G VT DG +
Sbjct: 3929 DGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3988
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 3989 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4046
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L+Y+ RP+ + L G IV +ACG +H+ A+ S G++
Sbjct: 4047 DDGKLGHGN-----------RLSYD---RPKLVEDLLGIEIVDIACGGHHSAAITSAGWL 4092
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4093 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4150
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S + +WG Y LG
Sbjct: 4151 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4210
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4211 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4250
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 168/350 (48%), Gaps = 36/350 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG GD P ++ LS+Y IKK +G H + +T+DG
Sbjct: 2999 VSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGK 3058
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ +P + L S+ + ACG+ + ++S + GL
Sbjct: 3059 VFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3116
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG D++ ++ +P+ + AL+G+ +V+VACG+ T+++ +
Sbjct: 3117 GEYGRLGHG--------DTATQM------KPKLVQALSGQRVVQVACGSRDAQTMSLTAD 3162
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VYTWG G +G+LG + P VD V+ E G+ S G+++
Sbjct: 3163 GCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVE----CGAQFSLALTKYGEVW 3218
Query: 308 MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
WGK +G+D KP + L G + + G +H D+ + +WG +G
Sbjct: 3219 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3278
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+ G G + P V L+ + V+CG HS+ ++VD+ G +
Sbjct: 3279 QQGNG--TTIVNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQ 3326
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G++I V C H A+ G YTWG+ G+LGHGD + RP +V
Sbjct: 4062 PKLVEDLLGIEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA 4119
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4120 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4179
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ ++ G Y +LGHGTD+ RPR +
Sbjct: 4180 IKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4223
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4224 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4279
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ D+
Sbjct: 3021 DYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDK 3080
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ + +G +G ++G+LG G +++P V+ L
Sbjct: 3081 PRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALS 3140
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ +S + G +G+LG G+D Y
Sbjct: 3141 GQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYT-------------- 3186
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P + L G +V+V CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3187 -PLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3245
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3246 RGKKIVH----VAVGALHCLAVTDTGQVYAWG 3273
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 142/338 (42%), Gaps = 34/338 (10%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G +V+++G A G
Sbjct: 2954 YVWGLNDKDQLGGLKGSKIK--IPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 3011
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP + L V + A G + L+ + + + G + G+
Sbjct: 3012 TNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3069
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + +PR I +L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 3070 LGHGNCTTLD--------------KPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWG 3115
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
G YGRLGH + + P+ V V+ + + + G +Y W
Sbjct: 3116 LGEYGRLGHGDTATQMKPKLVQALSGQRVV--QVACGSRDAQTMSLTADGCVYTWGDGDF 3173
Query: 310 GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
GKL G D Y L+D L+G + ++ G + +WG Y LG+G
Sbjct: 3174 GKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-- 3231
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P V+ L G ++ VA G H L + D V
Sbjct: 3232 NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3269
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y+ G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3978 FAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P V L+ E+ ACG + ++S +
Sbjct: 4038 GHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITS--AGWLYTW 4095
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG ++ Q RP+ + AL ++ VACG+ T+ V
Sbjct: 4096 GKGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4141
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4142 DDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVE----CGSQFSVALTRSGA 4197
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H +D +WG
Sbjct: 4198 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4257
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4258 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4294
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ + +A+ H +A+ +G Y+WG + G+LGHGD I D P ++
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIET 557
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + I G +++ ++ G +G +G+LG GS + P+ V L V
Sbjct: 558 LLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVH 617
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + T P+ +
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKT--------------PKIVDK 663
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L +V+V CG + A+ ++G VYTWG G RLGH ++ P+ ++ + +
Sbjct: 664 LLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKI-- 721
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
+S G + +Y WG+
Sbjct: 722 --KDLSVGGTHILALTEDQFVYGWGR 745
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+ +I F+A G S + A+ G YTWGR G+LGHG PT+V+
Sbjct: 552 PKLIETLLEKNIIFIACG--STYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTT 609
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
L + + G+G S T+ VT G ++G +G+LG G P V + L V
Sbjct: 610 LKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINV 669
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG F+ L++ + G +LGHG NE + + P+ I
Sbjct: 670 VRVFCGGQFSAALTA--RGEVYTWGKGDAYRLGHG--NEEHVR------------YPKLI 713
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+L + I ++ G H +A+ +VY WG YG++
Sbjct: 714 ESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + + + + + +A ++ H +A+ G VY+WG G GRLGH + P+ ++
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIET 557
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSG 330
N++ I+ GS S+ + G+LY WG+ N G DD P + L G
Sbjct: 558 LLEKNII----FIACGSTYSAALSASGELYTWGR-GNYGRLGHGSNDDVTVPTLVTTLKG 612
Query: 331 W---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
++ C + V A SWG YG+LG G G S PK VD L ++V+
Sbjct: 613 HMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GSDGSKTPKIVDKLLDINVV 670
Query: 388 SVACGYGHSLVIVDRTNV 405
V CG S + R V
Sbjct: 671 RVFCGGQFSAALTARGEV 688
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + + C S VA+ G YTWG+ + +LGHG
Sbjct: 4159 RGGSDGCKV-PLKIDSLAGLGV--IKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4215
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G+ P V
Sbjct: 4216 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4275
Query: 157 RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLPQ 191
L ++T ACG+ T+ W ++ S + A P
Sbjct: 4276 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASAPM 4312
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VY WG +LG + +P R +V + L P I+ GS + G+LY
Sbjct: 2953 VYVWGLNDKDQLGGLKGSKIKIPVRSEVLSK---LKP-IHIAGGSKTLFIVSQEGKLYAC 3008
Query: 310 GKLKNN----GDDWMY--PKPLMDLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYG 360
G+ N GDD+ PK + LS + ++ + SG H + D SWG + G
Sbjct: 3009 GEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3068
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG+G + P+ ++ L+ + +ACG GHS I
Sbjct: 3069 KLGHG--NCTTLDKPRLIESLKSKRIRDIACGSGHSAAI 3105
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----------EAVI 290
T++ D G +Y WG G+LG E +P + + L P AV
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESL---SALRPIQLAGGEQTLFAVT 3981
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGA 347
+ G V S+ G+L + G D M P L + ++ ++SG H + +
Sbjct: 3982 ADGKVYSTGYGAAGRLGIGGT-----DSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 4036
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ SWG G+LG+G + S PK V+ L G+ ++ +ACG HS I
Sbjct: 4037 EGHVYSWGEGDDGKLGHG--NRLSYDRPKLVEDLLGIEIVDIACGGHHSAAI 4086
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 13 ETGKEKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRLRPLVGVDI 58
ET EK + CGST A+ GR + ++ PT + L G +
Sbjct: 556 ETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMV 615
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
VA G + V G ++WG + G+LG G P IV +L + + G
Sbjct: 616 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCG 675
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
+ +T G +G +LG G+
Sbjct: 676 GQFSAALTARGEVYTWGKGDAYRLGHGN 703
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 20/230 (8%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSEL 107
R+ +G I V C H +A+ G Y WG N GQLG G D +P +V L
Sbjct: 129 RMVKTLGTKI-IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSL 187
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
+ I G HT+V+++ G A+G N GQLG I+N P +R L S V
Sbjct: 188 AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYA 247
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG +F+V+L+ G AG+ YGQLGHG K S + PR I L
Sbjct: 248 ACGEEFSVFLTMDGGVFTCGAGM--YGQLGHGN------KTSEI--------LPRQIMEL 291
Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G T+ +++CG HT+A V S+G VY WG GG G+LG+R ++ P+ V
Sbjct: 292 MGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 161/381 (42%), Gaps = 74/381 (19%)
Query: 23 LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+FC GST +G G D N+ +P + +I +A G + +AV EG+ Y+
Sbjct: 1 MFCWGSTIHGELGL-GGIEDENIFTPREVNFEKANEIEQIACG--DNYTIAVTKEGQVYS 57
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G N+ GQLG R R ++S + +KA G SHT+VV E G ++G N GQ
Sbjct: 58 CGNNDHGQLGQEKG--RKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115
Query: 142 LGSGSIRNEI-EPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + I EP V+ L +++ ACG ++ L++ + G GQLG G+
Sbjct: 116 LGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN--NGELYAWGSNSDGQLGLGS 173
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
D + K P+ + +LA I VACG HT+ + G V+ WG +G
Sbjct: 174 DTKMELK-------------PKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFG 220
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+LG + ++ VP ++ + + V C A G+
Sbjct: 221 QLGLSDIQNRNVPCQLRTLRNSRV---------------CYAACGE-------------- 251
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
F+ D + G YG+LG+G + S +P+++
Sbjct: 252 --------------------EFSVFLTMDGGVFTCGAGMYGQLGHG--NKTSEILPRQIM 289
Query: 380 ILEGMHVISVACGYGHSLVIV 400
L G V ++CG H+L +V
Sbjct: 290 ELMGSTVTQISCGRRHTLALV 310
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L V I FVA G H + + G + WGRN GQLG D R+ P +
Sbjct: 179 LKPKLVHSLAAVPIAFVACG--GYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQL 236
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L ++ A G +V +T DG G +GQLG G+ +EI P + L+ S V
Sbjct: 237 RTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTV 296
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
T +CG T+ L G + GL GQLG+
Sbjct: 297 TQISCGRRHTLALVPSRG-RVYAWGLGGAGQLGN 329
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
ST + A GR +++ PT L + V I+ VA HC+A+ EG Y+WG +
Sbjct: 3999 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGD 4058
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+K+ DRP ++ +L +I G H+ +T G +G ++G+LG G
Sbjct: 4059 DGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4118
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P V L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 4119 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4178
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4179 --------------PLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4224
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ + G+++ WG
Sbjct: 4225 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4265
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 152/342 (44%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P LS + + G VT DG +
Sbjct: 3940 DGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A + G + LSS EG + + G
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSS-EG-HVYSWGEG 4057
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG Y+ RP+ I L G I+ +ACG +H+ A+ S G++
Sbjct: 4058 DDGKLGHGNKMSYD--------------RPKLIEDLLGVEIIDIACGGHHSAAITSAGWL 4103
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + D+ P+ V+ Q V+ + +G + C ++ W
Sbjct: 4104 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4161
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S + +WG Y LG
Sbjct: 4162 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4221
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4222 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4261
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 113/236 (47%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+GV+I +A G H A+ G YTWG+ G+LGHGD + RP +V
Sbjct: 4073 PKLIEDLLGVEIIDIACG--GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA 4130
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 4131 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4190
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ ++ G Y +LGHGTD+ RPR +
Sbjct: 4191 IKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4234
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4235 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQ 4290
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ + D+
Sbjct: 3031 DNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDK 3090
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ + +G +G ++G+LG G + P V+ LV
Sbjct: 3091 PKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLV 3150
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
V ACG+ ++ + + G +G+LG G+D Y
Sbjct: 3151 GHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYT-------------- 3196
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P + L G +V+V CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3197 -PLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3255
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3256 RGKKIVH----VAVGALHCLAVTDTGQVYAWG 3283
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 161/350 (46%), Gaps = 36/350 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG GD P + LS++ IKK +G H + +T+DG
Sbjct: 3009 VSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGK 3068
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ + +P + L S+ + ACG+ + ++S + GL
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3126
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG Q RP+ + L G +V+VACG+ T+A+ +
Sbjct: 3127 GEYGRLGHGDT--------------VTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTD 3172
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY+WG G +G+LG + P V+ V+ E G+ S G+++
Sbjct: 3173 GCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVE----CGAQFSLALTKYGEVW 3228
Query: 308 MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
WGK +G+D KP + L G + + G +H D+ + +WG +G
Sbjct: 3229 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3288
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+ G G P V LE V V+CG HS+ V+VD+ + G +
Sbjct: 3289 QQGNGTTSVNRK--PSLVHELEDARVNRVSCGSSHSIAWVLVDQPSSGNQ 3336
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 148/344 (43%), Gaps = 38/344 (11%)
Query: 76 EGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
E Y WG N++ QLG G KI+ P LSK K G +V+++G A
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYA 3017
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLP 190
G +G+LG G N EP P+ L V + A G + L+ + + + G
Sbjct: 3018 CGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEG 3075
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ G+LGHG + + +P+ I L + I +ACG+ H+ A+ S G +
Sbjct: 3076 EDGKLGHGNNMSLD--------------KPKLIETLKSKRIRDIACGSGHSAAIASNGEL 3121
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYM 308
YTWG G YGRLGH + + P+ V + V+ ++ GS ++ A G +Y
Sbjct: 3122 YTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQ----VACGSRDAQTMALTTDGCVYS 3177
Query: 309 W-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G D Y P + L+G + ++ G + +WG Y
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3237
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P V+ L G ++ VA G H L + D V
Sbjct: 3238 LGHG--NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y+ G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3989 FAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE 4048
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P + L+ E+ ACG + ++S +
Sbjct: 4049 GHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITS--AGWLYTW 4106
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG ++ Q RP+ + AL ++ VACG+ T+ V
Sbjct: 4107 GKGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4152
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4153 DDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVE----CGSQFSVALTRSGA 4208
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H +D +WG
Sbjct: 4209 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4268
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4269 EGQLGDG----TTSALHRPRLVHALQGKKITRVACGSAHTL 4305
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 19/244 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G Y+WG + G+LGHGD + D P ++ L + I G +++ ++
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVS 579
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG G+ + + P+ V L V ACG+ + L + +
Sbjct: 580 GELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSW 639
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G + T P+ + L +VKV CG+ + A+ +
Sbjct: 640 GDGDYGKLGRGGTDGSKT--------------PKIVDKLLDINVVKVFCGSQFSAALTAH 685
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VYTWG G RLGH ++ P+ ++ + + +S G+ + +Y
Sbjct: 686 GEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKI----KDLSVGATHILVLTEDQFVY 741
Query: 308 MWGK 311
WG+
Sbjct: 742 GWGR 745
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L P + L IR +A G S H A+ G YTWG E G+LGHGD + + RP
Sbjct: 3087 SLDKPKLIETLKSKRIRDIACG--SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPK 3144
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T DG ++G G+LG G P V L
Sbjct: 3145 LVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLN 3204
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V CGA F++ L+ + + G Y +LGHG D+ +
Sbjct: 3205 GLGVVQVECGAQFSLALT--KYGEVWTWGKGDYFRLGHGNDHHVR--------------K 3248
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P + L G+ IV VA G H +AV G VY WG +G+ G+
Sbjct: 3249 PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3292
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+ +I F+A G S + A+ V G YTWGR G+LGHG+ PT+V+
Sbjct: 552 PKLIEALLEKNIVFIACG--STYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTT 609
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
L + + G+G S T+ VT G ++G +G+LG G P V + L V
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+ L++ + G +LGHG++ E P+ I
Sbjct: 670 VKVFCGSQFSAALTA--HGEVYTWGKGDTYRLGHGSE--------------EHVRYPKII 713
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+L + I ++ G H + + +VY WG YG++
Sbjct: 714 ESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + + + + +A ++ H +A+ G VY+WG G GRLGH + P+ ++
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEA 557
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
N++ I+ GS S+ + G+LY WG+ N DD M P + L G
Sbjct: 558 LLEKNIV----FIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGH 613
Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
++ C + V A SWG YG+LG G G S PK VD L ++V+
Sbjct: 614 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 671
Query: 389 VACG 392
V CG
Sbjct: 672 VFCG 675
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + + C S VA+ G YTWG+ + +LGHG
Sbjct: 4170 RGGSDGCKV-PLKIDSLAGLGV--IKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4226
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G+ P V
Sbjct: 4227 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4286
Query: 157 RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLPQ 191
L ++T ACG+ T+ W ++ S + A P
Sbjct: 4287 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASTPM 4323
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+DI V C S A+ G YTWG+ + +LGHG + P I+ L KIK
Sbjct: 665 LDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDL 724
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSP 155
G +H +V+TED +G N +GQ+ GS+ +E P
Sbjct: 725 SVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCP 766
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 59 RFVAAGCVSCHC-----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
R G V C +A+ G +TWG+ + +LGHG+ +PT+V L KI
Sbjct: 3202 RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIV 3261
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADF 172
G H + VT+ G A+G N HGQ G+G+ +PS V L + V +CG+
Sbjct: 3262 HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSH 3321
Query: 173 TV 174
++
Sbjct: 3322 SI 3323
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----------EAVI 290
T++ D G +Y WG G+LG E +P + + L P AV
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESL---SALRPIQLAGGEQTLFAVT 3992
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGA 347
+ G V S+ G+L + G D M P L + ++ + SG H + +
Sbjct: 3993 ADGKVYSTGYGAAGRLGIGGT-----DSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSS 4047
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ SWG G+LG+G + S PK ++ L G+ +I +ACG HS I
Sbjct: 4048 EGHVYSWGEGDDGKLGHG--NKMSYDRPKLIEDLLGVEIIDIACGGHHSAAI 4097
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ PT + L G + VA G + V G ++WG + G+LG G P
Sbjct: 600 DVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 659
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
IV +L + K G + +T G +G +LG GS + P + L
Sbjct: 660 IVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDK 719
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
++ + GA + L+ E + G YGQ+
Sbjct: 720 KIKDLSVGATHILVLT--EDQFVYGWGRNDYGQI 751
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 21/267 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P+ L L V ++ VA HC+A+ EG Y+WG E G+LGHG+K+ DRP I+
Sbjct: 3690 PSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIES 3749
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L + G +H+ +T G +G ++G+LG G ++++P V L+ V
Sbjct: 3750 LRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMD 3809
Query: 166 TACGA--DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG+ T ++ EG ++ + G YG+LG G + P I
Sbjct: 3810 VACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKI--------------PTKI 3855
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+L+G I+KV CG+ +VA+ + G VYTWG G Y RLGH + P++V Q V
Sbjct: 3856 ESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKV 3915
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ IS G+++ G++Y WG
Sbjct: 3916 IS----ISTGALHCVVCTDQGEVYTWG 3938
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 21/270 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ SP ++ L +R VA H +A+ +GR ++WG + G+LGHGD D P
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ L+ ++++ AG +H+ VT G +G ++G+LG G ++ P V LV +
Sbjct: 2830 CIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQ 2889
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V +CG+ L+ VEG + + G +G+LG G E P
Sbjct: 2890 RVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG--------------GSEGCSSPC 2935
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
+ L+G + V CG +VA+ G+VYTWG G Y RLGH +Q W P V+ +
Sbjct: 2936 LVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRW-PTLVEGLRG 2994
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ +S G+++ GQ++ WG
Sbjct: 2995 KKVIG----VSVGALHCLAVTDAGQVFAWG 3020
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 160/343 (46%), Gaps = 36/343 (10%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ Y WG N RGQLG + + PT+ LS + + G +T DG A G+
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + PS + L + A G + LSS EG + + G + G
Sbjct: 3674 GAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSS-EG-EVYSWGEGEDG 3731
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG KL + RPR I +L G+ +V VACG H+ A+ + G +YTW
Sbjct: 3732 KLGHGN-----------KLPCD---RPRIIESLRGKDVVDVACGGAHSAAITALGELYTW 3777
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA----GGGQLYMW 309
G G YGRLGH + D+ P+ V+ V+ ++ GS ++ A GG ++ W
Sbjct: 3778 GKGRYGRLGHGDSDDQLKPKLVEALLGYRVMD----VACGSGDAQTCAITDEEGGTVWSW 3833
Query: 310 -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGEL 362
GKL G D P + LSG + ++ G+ +++ S +WG Y L
Sbjct: 3834 GDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRL 3893
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G + PKKV L+G VIS++ G H +V D+ V
Sbjct: 3894 GHG--VDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEV 3934
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 151/338 (44%), Gaps = 38/338 (11%)
Query: 78 RCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
R Y WG N++ QLG G KI+ + + +S I AG +S +VT+ G + A G
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQ-AVDWTVSLQPISVAGGSKS-LFLVTQSGKAYACG 2756
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEV---TATACGADFTVWLSSVEGASILNAGLPQY 192
+G+LG G RN P + L V A G + L++ + + G
Sbjct: 2757 EGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTA--DGRVFSWGEGDD 2814
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG +T PR I AL G + VA G+NH+ AV S G +YT
Sbjct: 2815 GKLGHGDVTSLDT--------------PRCIEALNGFRVRDVAAGSNHSAAVTSSGELYT 2860
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW- 309
WG G YGRLGH + + P+RV+ V+ +S GS ++ A GG +Y W
Sbjct: 2861 WGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQ----VSCGSRDAQTLALVEGGLVYSWG 2916
Query: 310 ----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
GKL G + L+D LSG + ++ G + + +WG Y LG
Sbjct: 2917 DGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLG 2976
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G + P V+ L G VI V+ G H L + D
Sbjct: 2977 HG--SDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD 3012
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 40/340 (11%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V G+ Y G G+LG G + P ++ LS++ ++K +G H + +T DG
Sbjct: 2746 VTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGR 2805
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILN 186
++G G+LG G + + P RC+ + V A G++ + ++S +
Sbjct: 2806 VFSWGEGDDGKLGHGDVTSLDTP---RCIEALNGFRVRDVAAGSNHSAAVTS--SGELYT 2860
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAV 244
GL +YG+LGHG DN Q P+ + +L G+ +V+V+CG+ T+A+
Sbjct: 2861 WGLGEYGRLGHG-DNL-------------TQLTPKRVESLVGQRVVQVSCGSRDAQTLAL 2906
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G VY+WG G +G+LG + P VD V + G+ S G
Sbjct: 2907 VEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV----CHVECGAQFSVALTCNG 2962
Query: 305 QLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
+Y WGK L + D + +P + L G + + G +H D+ +WG
Sbjct: 2963 HVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDN 3022
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+G+ G G + P V ++G+ + VACG HS+
Sbjct: 3023 DHGQQGNGSI--TVNRRPTLVQGIDGIKITRVACGSSHSV 3060
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 36/341 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
A+ +GR Y G G+LG G P+++ L +KK +G H + ++ +
Sbjct: 3660 FAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSE 3719
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L +V ACG + ++++ +
Sbjct: 3720 GEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITAL--GELYTW 3777
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG ++ Q +P+ + AL G ++ VACG+ T A+
Sbjct: 3778 GKGRYGRLGHGDSDD--------------QLKPKLVEALLGYRVMDVACGSGDAQTCAIT 3823
Query: 246 SK--GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G V++WG G YG+LG +P +++ ++ E GS S +
Sbjct: 3824 DEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVE----CGSQFSVALSNN 3879
Query: 304 GQLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGH 356
G +Y WGK L + D+ + PK +M L G + + +G +H V D +WG
Sbjct: 3880 GSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGD 3939
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G P+ V L+ + V+CG H++
Sbjct: 3940 NDEGQLGDG--TTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 47/240 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G D+ VA G H A+ G YTWG+ G+LGHGD + +P +V
Sbjct: 3744 PRIIESLRGKDVVDVACG--GAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEA 3801
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSE 162
L Y++ G+G + T +T++ + W +G+LG G P+ + L
Sbjct: 3802 LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGL 3861
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL--------- 212
+ CG+ F+V LS+ S+ G Y +LGHG D + L
Sbjct: 3862 GIIKVECGSQFSVALSN--NGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISIS 3919
Query: 213 --------------AY------EAQ---------PRPRAIAALAGETIVKVACGTNHTVA 243
Y E Q +PR +AAL + I +V+CG+ HTVA
Sbjct: 3920 TGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 98/246 (39%), Gaps = 53/246 (21%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L +P + L G +R VAAG S H AV G YTWG E G+LGHGD + + P
Sbjct: 2824 SLDTPRCIEALNGFRVRDVAAG--SNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPK 2881
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
V L ++ + G + T+ + E G ++G G+LG G P CLV
Sbjct: 2882 RVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP----CLV 2937
Query: 161 SE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
+ V CGA F+V L+ + G Y +LGHG+D
Sbjct: 2938 DKLSGLGVCHVECGAQFSVALTC--NGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGK 2995
Query: 205 --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
D+ A+ RP + + G I +VACG
Sbjct: 2996 KVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055
Query: 238 TNHTVA 243
++H+VA
Sbjct: 3056 SSHSVA 3061
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP + L G+ + V G + VA+ G YTWG+ + +LGHG PT+V
Sbjct: 2933 SPCLVDKLSGLGVCHVECG--AQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVE 2990
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G H + VT+ G A+G N HGQ G+GSI P+ V+ + ++T
Sbjct: 2991 GLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKIT 3050
Query: 165 ATACGADFTVWLSSVEGASI 184
ACG+ +V ++ E S+
Sbjct: 3051 RVACGSSHSVAWTAPEPPSV 3070
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ L G+ I + C S VA+ G YTWG+ + +LGHG RP V
Sbjct: 3852 PTKIESLSGLGI--IKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMT 3909
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L K+ G H VV T+ G +G N GQLG G+ +P V L + ++
Sbjct: 3910 LQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINR 3969
Query: 166 TACGADFTVWLSSVEGASILNAG 188
+CG+ TV S+ +G S AG
Sbjct: 3970 VSCGSAHTVAWSTCKGCSTPVAG 3992
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
+T + AVGR +++ PT L + V ++ VA HC+A+ EG Y+WG +
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGHG+++ DRP ++ EL +I G H+ +T G +G ++G+LG G
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 3959
Query: 147 IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++ P + L +V ACG+ L + ++ + G YG+LG G +
Sbjct: 3960 SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4019
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P I +LAG ++KV CG+ +VA+ G +YTWG G Y RLGH
Sbjct: 4020 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4065
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR+V Q ++ I+ GS++ G+++ WG
Sbjct: 4066 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4106
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 30/342 (8%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D G Y WG N RGQLG + + P + LS + + G VT DG A
Sbjct: 3781 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3840
Query: 134 FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G+ G+LG G + + P+ ++ + + A G + LSS EG + + G
Sbjct: 3841 TGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 3898
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG +L+Y+ RP+ I L G IV +ACG +H+ A+ S G++
Sbjct: 3899 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 3944
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
YTWG G YGRLGH + +D+ P+ ++ Q V+ + +G + C ++ W
Sbjct: 3945 YTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4002
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G D P + L+G + ++ G+ S I +WG Y LG
Sbjct: 4003 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4062
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G P+KV L+G +IS+A G H + D+ V
Sbjct: 4063 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4102
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 149/336 (44%), Gaps = 38/336 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G VV+++G A G
Sbjct: 2793 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2850
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP P+ L V + A G + L+ + + + G + G+
Sbjct: 2851 TNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 2908
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG +S+ L +PR I +L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 2909 LGHG---------NSISLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 2954
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V V+ I+ GS ++ A G +Y W
Sbjct: 2955 LGEYGRLGHGDTATQSKPKLVQSLVGQRVIQ----IACGSRDAQTMALTADGLVYSWGDG 3010
Query: 310 --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y L+D L+G + ++ G + +WG Y LG+G
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3070
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
P V+ L G +I VA G H L + D
Sbjct: 3071 --NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G +I V C H A+ G YTWG+ G+LGHGD + P ++
Sbjct: 3914 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA 3971
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L YK+ G+G + T+ VT+D N ++G +G+LG G P + L V
Sbjct: 3972 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4031
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ +I G Y +LGHGTD+ RPR +
Sbjct: 4032 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4075
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
AAL G+ I+ +A G+ H VA KG V+TWG G+LG PR V Q
Sbjct: 4076 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4131
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ I D+
Sbjct: 2860 DSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDK 2919
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ +T G +G ++G+LG G + +P V+ LV
Sbjct: 2920 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLV 2979
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ ++ + + G +G+LG G+D Y
Sbjct: 2980 GQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT-------------- 3025
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I L G +V++ CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 3026 -PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 3084
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3085 RGKKIIH----VAVGALHCLAVTDIGQVYAWG 3112
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 36/352 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG GD P + LS+Y IKK +G H + +T+D
Sbjct: 2836 FVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQD 2895
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ + +P + L S+ + ACG+ + ++S +
Sbjct: 2896 GKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTW 2953
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG D++ Q +P+ + +L G+ ++++ACG+ T+A+
Sbjct: 2954 GLGEYGRLGHG--------DTA------TQSKPKLVQSLVGQRVIQIACGSRDAQTMALT 2999
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G VY+WG G +G+LG + P +D V+ I G+ S G+
Sbjct: 3000 ADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGE 3055
Query: 306 LYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
++ WGK +G+D KP + L G + + G +H D +WG
Sbjct: 3056 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDND 3115
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+G+ G G + P V L+ V V+CG HS+ V+ D+ + +
Sbjct: 3116 HGQQGNG--TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAINNQ 3165
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + +KK +G H + ++ +
Sbjct: 3830 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 3889
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G+ ++G G+LG G+ + P + L+ +E+ ACG + ++S +
Sbjct: 3890 GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 3947
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q P+ I AL ++ VACG+ T+ V
Sbjct: 3948 GKGRYGRLGHG--------DS------EDQLTPKLIEALQDYKVIDVACGSGDAQTLCVT 3993
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P +++ V+ E GS S G
Sbjct: 3994 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGA 4049
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4050 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4109
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG G +SA+ P+ V L+G + VACG H+L
Sbjct: 4110 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4146
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I +A+ H +A+ + Y+WG E G+LGHG+ D P ++ L + I
Sbjct: 502 ITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIAC 561
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
G +++ ++ +G +G +G+LG G S ++ + P+ V L V ACG
Sbjct: 562 GSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQ 621
Query: 176 LSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
V + I+ + G +G+LG G + P+ + L + KV
Sbjct: 622 TLCVTASGIVFSWGDGNHGKLGRG--------------GCDGSKTPKIVDKLLDINVAKV 667
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
CG + A+ + G VYTWG G +LGH + P+ +D+ + +
Sbjct: 668 YCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKI 716
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + + C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 4020 PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAA 4077
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V T+ G +G N GQLG G+ P V L ++T
Sbjct: 4078 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITR 4137
Query: 166 TACGADFTVWLSSVEGA 182
ACG+ T+ S+++
Sbjct: 4138 VACGSAHTLAWSTMKAT 4154
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 93/235 (39%), Gaps = 26/235 (11%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+DI C A+ G YTWG+ E +LGHG++ P I+ L KIK
Sbjct: 660 LDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDL 719
Query: 116 GAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGA 170
G H + +TED L +GW N HGQ+ I P P C V ACG
Sbjct: 720 YIGHLHVLALTED--QLVYGWGRNDHGQIDPA--LGTIVPEPTLCPTFSGKNVIGLACGP 775
Query: 171 DFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--RP----RAI 223
+ W ++ S+ N + + + + D+ + A E P RP R
Sbjct: 776 TQSFAWCTA--AWSVAN----RVAFVVDICEETFRLLDTLLNKACEGLPSTRPPTQDREC 829
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
A+A ++++ T T +DSK G L +Q+ + +D+
Sbjct: 830 LAVATLNLIRLQLHTMITHNIDSKSV----GLANTPLLNSLKQRCVMLASSIDIL 880
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H +A+ VY+WG G GRLGH P+ ++ N+ I+ GS S+
Sbjct: 512 THYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNI----TFIACGSTYSA 567
Query: 299 CTAGGGQLYMWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGN----MHHFVGA 347
+ G+LY WG+ N+ D M P + L+G + + G V A
Sbjct: 568 ALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTA 627
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG +G+LG G G S PK VD L ++V V CG S
Sbjct: 628 SGIVFSWGDGNHGKLGRG--GCDGSKTPKIVDKLLDINVAKVYCGQQFS 674
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 49/241 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIV 104
P + LV +I F+A G S + A+ G YTWGR G+LGHG+ +D PT+V
Sbjct: 545 PKLIEALVEKNITFIACG--STYSAALSSNGELYTWGRGNYGKLGHGNS-DKDVMIPTLV 601
Query: 105 SELSKYKIKKA--GAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
+ L+ + + G GR T+ VT G ++G HG+LG G P V + L
Sbjct: 602 TALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLD 661
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY------------NTKDS 208
V CG F+ L++ + G + +LGHG ++ KD
Sbjct: 662 INVAKVYCGQQFSAALTAY--GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDL 719
Query: 209 SV-----------KLAY---------------EAQPRPRAIAALAGETIVKVACGTNHTV 242
+ +L Y P P +G+ ++ +ACG +
Sbjct: 720 YIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSF 779
Query: 243 A 243
A
Sbjct: 780 A 780
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 24/284 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P ++ L G++IR +A C HC+AV +G Y+WGRN+ GQ
Sbjct: 84 WGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA--CGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +K AG HT VT+ G +GW ++G LG G +
Sbjct: 142 LGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGD 201
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P+ V + E + ACG T+ +S + + G +YGQLGHG
Sbjct: 202 RMLPAEVPAVGDEKMCMVACGWRHTIAVS--QSGKLYTYGWSKYGQLGHGD--------- 250
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
Y P +AALA I +V+ G HTVA+ G +Y WG+ +G++G + D
Sbjct: 251 -----YADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDD 305
Query: 269 EWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P+ + + Q V+ +S G ++ +Y WG+
Sbjct: 306 HTSPQLISIPGQHQRVVQ----VSCGWRHTVAVTDKNNVYSWGR 345
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 168/359 (46%), Gaps = 36/359 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ ++GR E GQLGHGD R P I+ L+ +I
Sbjct: 7 VLLVSAG--ASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVAC 64
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT + ++ ++GW G+LG G+ + P P++ L E+ ACG
Sbjct: 65 GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC-- 122
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG G +T DS V P + A G ++ +A
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLV---------PHKLLAFEGVSVKMLA 168
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +P V + +++ G
Sbjct: 169 AGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM----CMVACGWR 224
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G+LY +G K +GD D + P + L+ +N+ + G H ++
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA 284
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH--VISVACGYGHSLVIVDRTNV 405
+ WG ++G++G G +S P+ + I G H V+ V+CG+ H++ + D+ NV
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTS--PQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNV 340
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
K+ AG SHTV + +FG + GQLG G + + P + L E++ ACG
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACG 65
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD T S+ +I + G +G+LGHG N+ D V P I AL G
Sbjct: 66 ADHTTAYSATR-LTIYSWGWGDFGRLGHG-----NSSDLFV---------PHPIKALQGL 110
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV + G VY+WG G+LG + D VP ++ F+ +V +
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSV----KM 166
Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++AG+ +++ G+LY WG L + GD M P + + G CM +
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDR-MLPAEVPAV-GDEKMCMVACGWR 224
Query: 343 HFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H + S ++G ++YG+LG+G Y +P +V L ++ V+ G+ H++ +
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADH--LLPHQVAALAEFNITQVSGGWRHTVALT 282
Query: 401 D 401
+
Sbjct: 283 E 283
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 33/312 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG + G+LGHG+ P + L +I++ G SH + VT DG ++G N++
Sbjct: 80 YSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQN 139
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG G + + P + V A GA+ T + + + G +YG LG G
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTA--AVTDSGKLYGWGWGRYGNLGLG 197
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ + P + A+ E + VACG HT+AV G +YT+G+ Y
Sbjct: 198 DRGD--------------RMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNG 316
G+LGH + D +P +V N+ +S G ++ G+LY WG K G
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQ----VSGGWRHTVALTEAGKLYGWGWNKFGQVG 299
Query: 317 ----DDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
DD P+ L+ + G + R + G H D + + SWG G+LG+G
Sbjct: 300 SGDVDDHTSPQ-LISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVD 358
Query: 370 KSSAMPKKVDIL 381
+S+ PK + L
Sbjct: 359 RSA--PKGIQAL 368
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P VG D + C H +AV G+ YT+G ++ GQLGHGD P V+ L+++
Sbjct: 209 PAVG-DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFN 267
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--LVSEVTATACG 169
I + G HTV +TE G +GWNK GQ+GSG + + P + V +CG
Sbjct: 268 ITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCG 327
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHG 198
TV + + ++ + G GQLGHG
Sbjct: 328 WRHTV--AVTDKNNVYSWGRGTSGQLGHG 354
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+L + G R V C H VAV + Y+WGR GQLGHGD + R P + LS
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 31/334 (9%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
+WGR E GQLGHGD R PT+++ ++ G HT+ ++D L ++GW
Sbjct: 44 SWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDF 103
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G+ + P P+ L ++ ACG L+ + + G Q GQLG G
Sbjct: 104 GRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC--LTVTFNGQVHSWGRNQNGQLGLG 161
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N +DS + P+ I A G + +A G HT A+ G +Y WG+G Y
Sbjct: 162 -----NNQDSLL---------PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRY 207
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----N 314
G LG ++ D VP +V + ++ +++ G +S + G LY +G K
Sbjct: 208 GNLGLSDRDDRSVPEKVSSVEGEKMV----LVACGWRHSVSVSSSGALYTYGWSKYGQLG 263
Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
+GD D + P+ L L + + G H V D WG ++G++G
Sbjct: 264 HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC 323
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S P +V+ + ++ VACG+ H+L + + N+
Sbjct: 324 S--PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 48/347 (13%)
Query: 53 LVGVDI-RFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
L D+ R + C + H +A D E + Y+WG + G+LGHG+ P + L
Sbjct: 67 LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
KIK+ G SH + VT +G ++G N++GQLG G+ ++ + P ++ V A G
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAG 186
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
A+ T ++ EG + G +YG LG + D SV P ++++ GE
Sbjct: 187 AEHTTAIT--EGGDLYGWGWGRYGNLGLS-----DRDDRSV---------PEKVSSVEGE 230
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V VACG H+V+V S G +YT+G+ YG+LGH + +D VPR+++ + P +
Sbjct: 231 KMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKD----VPISQ 286
Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGD-----DWMYP---KPLMDLSGWNLR 334
IS G ++ A G+LY WG +++N D + +P K + GW
Sbjct: 287 ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHT 346
Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ N + F SWG G+LG+G +++ PK +D L
Sbjct: 347 LALTENKNIF--------SWGRGASGQLGHGEIIDRNT--PKMIDAL 383
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P + L G+ I+ +A C HC+ V G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA--CGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + +K AG HT +TE G+ +GW ++G LG +
Sbjct: 158 LGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDD 217
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + E + ACG +V +SS ++ G +YGQLGHG
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSS--SGALYTYGWSKYGQLGHGD--------- 266
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
++ PR + AL I +++ G HT+AV G +Y WG+ +G++G + D
Sbjct: 267 -----FQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P V+ ++ ++ G ++ ++ WG+
Sbjct: 322 HCSPVEVNFPDEQKIVQ----VACGWRHTLALTENKNIFSWGR 360
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 29/306 (9%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE 162
V E + + AG +H+ + ++G + GQLG G + P+ + V
Sbjct: 15 VPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPR 74
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
VT+ CGAD T+ S E + + G +G+LGHG N+ D + QP
Sbjct: 75 VTSVICGADHTIAYSDDE-MQLYSWGWGDFGRLGHG-----NSSD-----VFNPQP---- 119
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I AL G I ++ACG +H + V G V++WG G+LG +D +P+++ F+
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVC 179
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCM 336
V +I+AG+ +++ GG LY WG+ N G DD P+ + + G + +
Sbjct: 180 V----KMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLV 235
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G H V + + ++G ++YG+LG+G + + +P+K++ L+ + + ++ G+ H
Sbjct: 236 ACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF--QDHLVPRKLEALKDVPISQISGGWRH 293
Query: 396 SLVIVD 401
++ + +
Sbjct: 294 TMAVAE 299
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
A+ ++++ ++ G NH+ A+ S V +WG G G+LGH + +D VP + F
Sbjct: 14 AVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP 73
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
V +VI + + QLY W G+L + N D P+P++ L G ++
Sbjct: 74 RV---TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQ 130
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G+ H V + SWG Q G+LG G + S +P+K+ EG+ V +A G
Sbjct: 131 IACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKAFEGVCVKMIAAGAE 188
Query: 395 HSLVIVD 401
H+ I +
Sbjct: 189 HTTAITE 195
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+ V C H +A+ ++WGR GQLGHG+ I R+ P ++ LS
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 24/284 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P ++ L G++IR +A C HC+AV +G Y+WGRN+ GQ
Sbjct: 84 WGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA--CGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +K AG HT VT+ G +GW ++G LG G +
Sbjct: 142 LGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGD 201
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P+ V + E + ACG T+ +S + + G +YGQLGHG
Sbjct: 202 RMLPAEVPAVGDEKMCMVACGWRHTIAVS--QSGKLYTYGWSKYGQLGHGD--------- 250
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
Y P +AALA I +V+ G HTVA+ G +Y WG+ +G++G + D
Sbjct: 251 -----YADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDD 305
Query: 269 EWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P+ + + Q V+ +S G ++ +Y WG+
Sbjct: 306 HTSPQLISIPGQHQRVVQ----VSCGWRHTVAVTDKNNVYSWGR 345
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 168/359 (46%), Gaps = 36/359 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ ++GR E GQLGHGD R P I+ L+ +I
Sbjct: 7 VLLVSAG--ASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVAC 64
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT + ++ ++GW G+LG G+ + P P++ L E+ ACG
Sbjct: 65 GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC-- 122
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG G +T DS V P + A G ++ +A
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLV---------PHKLLAFEGVSVKMLA 168
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +P V + +++ G
Sbjct: 169 AGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM----CMVACGWR 224
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ + G+LY +G K +GD D + P + L+ +N+ + G H ++
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA 284
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH--VISVACGYGHSLVIVDRTNV 405
+ WG ++G++G G +S P+ + I G H V+ V+CG+ H++ + D+ NV
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTS--PQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNV 340
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG + G+LGHG+ P + L +I++ G SH + VT DG ++G N++
Sbjct: 80 YSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQN 139
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG G + + P + V A GA+ T + +G + G +YG LG G
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTA--AVTDGGKLYGWGWGRYGNLGLG 197
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ + P + A+ E + VACG HT+AV G +YT+G+ Y
Sbjct: 198 DRGD--------------RMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNG 316
G+LGH + D +P +V N+ +S G ++ G+LY WG K G
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQ----VSGGWRHTVALTEAGKLYGWGWNKFGQVG 299
Query: 317 ----DDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
DD P+ L+ + G + R + G H D + + SWG G+LG+G
Sbjct: 300 SGDVDDHTSPQ-LISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVD 358
Query: 370 KSSAMPKKVDIL 381
+S+ PK + L
Sbjct: 359 RSA--PKGIQAL 368
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
K+ AG SHTV + +FG + GQLG G + P + L E++ ACG
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACG 65
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD T S+ +I + G +G+LGHG N+ D V P I AL G
Sbjct: 66 ADHTTAYSATR-LTIYSWGWGDFGRLGHG-----NSSDLFV---------PHPIKALQGL 110
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV + G VY+WG G+LG + D VP ++ F+ +V +
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSV----KM 166
Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++AG+ +++ GG+LY WG L + GD M P + + G CM +
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDR-MLPAEVPAV-GDEKMCMVACGWR 224
Query: 343 HFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H + S ++G ++YG+LG+G Y +P +V L ++ V+ G+ H++ +
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADH--LLPHQVAALAEFNITQVSGGWRHTVALT 282
Query: 401 D 401
+
Sbjct: 283 E 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P VG D + C H +AV G+ YT+G ++ GQLGHGD P V+ L+++
Sbjct: 209 PAVG-DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFN 267
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--LVSEVTATACG 169
I + G HTV +TE G +GWNK GQ+GSG + + P + V +CG
Sbjct: 268 ITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCG 327
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHG 198
TV + + ++ + G GQLGHG
Sbjct: 328 WRHTV--AVTDKNNVYSWGRGTSGQLGHG 354
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+L + G R V C H VAV + Y+WGR GQLGHGD + R P + LS
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 31/334 (9%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
+WGR E GQLGHGD R PT+++ ++ G HT+ ++D L ++GW
Sbjct: 44 SWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDF 103
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G+ + P P+ L ++ ACG L+ + + G Q GQLG G
Sbjct: 104 GRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC--LTVTFNGQVHSWGRNQNGQLGLG 161
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N +DS + P+ I A G + +A G HT A+ G +Y WG+G Y
Sbjct: 162 -----NNQDSLL---------PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRY 207
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----N 314
G LG ++ D VP +V + ++ +++ G +S + G LY +G K
Sbjct: 208 GNLGLSDRDDRSVPEKVSSVEGEKMV----LVACGWRHSVSVSSSGALYTYGWSKYGQLG 263
Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
+GD D + P+ L L + + G H V D WG ++G++G
Sbjct: 264 HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC 323
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S P +V+ + ++ VACG+ H+L + + N+
Sbjct: 324 S--PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 48/347 (13%)
Query: 53 LVGVDI-RFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
L D+ R + C + H +A D E + Y+WG + G+LGHG+ P + L
Sbjct: 67 LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
KIK+ G SH + VT +G ++G N++GQLG G+ ++ + P ++ V A G
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAG 186
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
A+ T ++ EG + G +YG LG + D SV P ++++ GE
Sbjct: 187 AEHTTAIT--EGGDLYGWGWGRYGNLGLS-----DRDDRSV---------PEKVSSVEGE 230
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V VACG H+V+V S G +YT+G+ YG+LGH + +D VPR+++ + P +
Sbjct: 231 KMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKD----VPISQ 286
Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGD-----DWMYP---KPLMDLSGWNLR 334
IS G ++ A G+LY WG +++N D + +P K + GW
Sbjct: 287 ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHT 346
Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ N + F SWG G+LG+G +++ PK +D L
Sbjct: 347 LALTENKNIF--------SWGRGASGQLGHGEIIDRNT--PKMIDAL 383
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P + L G+ I+ +A C HC+ V G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA--CGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + +K AG HT +TE G+ +GW ++G LG +
Sbjct: 158 LGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDD 217
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P V + E + ACG +V +SS ++ G +YGQLGHG
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSS--SGALYTYGWSKYGQLGHGD--------- 266
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
++ PR + AL I +++ G HT+AV G +Y WG+ +G++G + D
Sbjct: 267 -----FQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P V+ ++ ++ G ++ ++ WG+
Sbjct: 322 HCSPVEVNFPDEQKIVQ----VACGWRHTLALTENKNIFSWGR 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 29/306 (9%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE 162
V E + + AG +H+ + ++G + GQLG G + P+ + V
Sbjct: 15 VPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPR 74
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
VT+ CGAD T+ S E + + G +G+LGHG N+ D + QP
Sbjct: 75 VTSVICGADHTIAYSDDE-MQLYSWGWGDFGRLGHG-----NSSD-----VFNPQP---- 119
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I AL G I ++ACG +H + V G V++WG G+LG +D +P+++ F+
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVC 179
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCM 336
V +I+AG+ +++ GG LY WG+ N G DD P+ + + G + +
Sbjct: 180 V----KMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLV 235
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G H V + + ++G ++YG+LG+G + + +P+K++ L+ + + ++ G+ H
Sbjct: 236 ACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF--QDHLVPRKLEALKDVPISQISGGWRH 293
Query: 396 SLVIVD 401
++ + +
Sbjct: 294 TMAVAE 299
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
A+ ++++ ++ G NH+ A+ S V +WG G G+LGH + +D VP + F
Sbjct: 14 AVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP 73
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
V +VI + + QLY W G+L + N D P+P++ L G ++
Sbjct: 74 RV---TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQ 130
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G+ H V + SWG Q G+LG G + S +P+K+ EG+ V +A G
Sbjct: 131 IACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKAFEGVCVKMIAAGAE 188
Query: 395 HSLVIVD 401
H+ I +
Sbjct: 189 HTTAITE 195
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+ V C H +A+ ++WGR GQLGHG+ I R+ P ++ LS
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ +T G+ +G ++G+LG G ++++P V L V
Sbjct: 4092 SLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWG-FGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+L G +VKV CG+ +VA+ G VYTW F Y RLGH PR+V Q V
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKV 4257
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ I+ GS++ C G++Y WG
Sbjct: 4258 I----AIATGSLHCVCCTEDGEVYTWG 4280
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3091 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3199
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3200 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3256
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3257 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2974 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3028
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3088
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3141
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3142 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3193 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3306
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3307 VQGLEGQKITRVACGSSHSV 3326
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
+R AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3001
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3062 HAMAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3105
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279
Query: 403 TNV 405
V
Sbjct: 3280 GQV 3282
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 134/326 (41%), Gaps = 68/326 (20%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTW 4120
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G G YGRLGH + +D+ P+ V+ Q V ++ +C +G Q
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRV-----------IDIACGSGDAQTL------ 4163
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
C+ D + SWG YG+LG G G
Sbjct: 4164 ---------------------CLTD---------DDTVWSWGDGDYGKLGRG--GSDGCK 4191
Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
+P K+D L G+ V+ V CG S+ +
Sbjct: 4192 VPMKIDSLTGLGVVKVECGSQFSVAL 4217
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 148/340 (43%), Gaps = 35/340 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITA--AGDLFTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4222
Query: 306 LYMWG------KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHA 357
+Y W +L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4223 VYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4282
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4283 DEGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4320
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S + A +D +L+ + + G G+LGHG +V
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535
Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
D+ +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
PK L DL +RC ++ + D +WG LG+G ++ PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
+ L+G VI VA G H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR +A G S H A+ G YTWG E G+LGHGD + +P +V L +++ +
Sbjct: 3105 IRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +T++G ++G G+LG G P + L + V CGA F++
Sbjct: 3163 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSL 3222
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYN-------------------------TKDSS 209
L+ + + G Y +LGHGTD D+
Sbjct: 3223 ALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG 3280
Query: 210 VKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A+ +P + L G+ I +VACG++H+VA
Sbjct: 3281 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P +++ L G + +A G S HCV +G YTWG N+ GQLG G R
Sbjct: 4240 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4297
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P +V+ L KI + G +HT+
Sbjct: 4298 PRLVAALQGKKINRVACGSAHTL 4320
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ YTWG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +V+VAC
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G V++WG G GRLGH + P+ + I+ GS
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + ++ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAL 673
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
I K G ++ +T+DG +G + +LG G+ + P
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G + K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2945 GSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 3000
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
++ GS + G++Y G+ N + P+ + LS + ++ + S
Sbjct: 3001 --VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHS 3058
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3059 GGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 398 VI 399
I
Sbjct: 3117 AI 3118
>gi|164657209|ref|XP_001729731.1| hypothetical protein MGL_3275 [Malassezia globosa CBS 7966]
gi|159103624|gb|EDP42517.1| hypothetical protein MGL_3275 [Malassezia globosa CBS 7966]
Length = 504
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 181/425 (42%), Gaps = 39/425 (9%)
Query: 15 GKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
G G ++ CG D G L +P LR + V R V + C S H V +
Sbjct: 3 GTAPWGRVVLCGRVAADEAGNEVVNAGDCLYAPHILRSVCHVRTRAVVSSCTSDHAVILS 62
Query: 75 VEGRCYTWGRNERGQLG---------------HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V G Y +GRN Q G ++ ++ + I G
Sbjct: 63 VHGDAYLYGRNAEAQCGVPVTSTSDAASLWLYDARRLDKEHDFVPPIAPGVSIHTGATGA 122
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
HT++VT G A G N+ GQ G G++ + P + + V ACG +V ++
Sbjct: 123 MHTLLVTTQGELYAAGSNEFGQCGLGTLATCV-PFQLVPMTERVVDVACGRAASVVVT-- 179
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E ++ G + G LG + ++T S V Y+ P I L G IV+V CG
Sbjct: 180 ESGAVYTMGSSEDGMLGTCAASWHHTGPSDVT--YDLARHPVRIPNLGG--IVRVTCGER 235
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H A+D GY+Y WG RLG Q D+ P R+ F R N + AG+ + C
Sbjct: 236 HVAALDRDGYMYVWGHASLARLGCGTQIDQPFPVRIPQFVRKNKQDRIRDVVAGTTCTMC 295
Query: 300 TAGGGQLYMWG--KLKNNG---DDWMYPKPLMDLSGWNLRCMDSG--NMHHFVGA----- 347
+L++ G +LK++G ++ KPL +L+ +++ M +G M V
Sbjct: 296 VDNQERLWIAGTWRLKDDGGPDQSFLIYKPLAELADYDVHEMAAGADTMQCLVKPTDEHG 355
Query: 348 DSSCISWGH---AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
++ +WG A + ELG G ++ +P + ILE + V++VA G S +V +
Sbjct: 356 NTHMQAWGWGEGAWHAELGSS--GGTTAPVPTMLHILEPLKVVAVASGRHTSYWLVQPDS 413
Query: 405 VGERL 409
V L
Sbjct: 414 VYAEL 418
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG + DRP ++
Sbjct: 2335 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 2394
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 2395 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2454
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 2455 GIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 2500
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +V+V CG+ +VA+ G VYTWG G Y RLGH PR+V Q +
Sbjct: 2501 SLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAI 2560
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 2561 ----AIATGSLHCVCCTEDGEVYTWG 2582
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 1332 GLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 1391
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 1392 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVK 1451
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 1452 VLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 1500
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 1501 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 1557
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 1558 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 1587
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 37/364 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVS 105
P+ L +++ VA G S AV VEG+ Y G G+LG G P V+
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVT 1345
Query: 106 ELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
LS Y +KK +G H +T DG ++G G+LG S N +P + L ++
Sbjct: 1346 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR 1405
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG+ + L+S + GL +YG+LGHG D++ +L +P+
Sbjct: 1406 IRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DTTTQL------KPKM 1449
Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L G +V+VACG+ T+A+ +G V++WG G +G+LG + +P+ ++
Sbjct: 1450 VKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 1509
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLR 334
V I G+ S G ++ WGK +G D KP + L G +
Sbjct: 1510 QGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 1565
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G +H DS + +WG +G+ G G + P V LEG + VACG
Sbjct: 1566 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGS 1623
Query: 394 GHSL 397
HS+
Sbjct: 1624 SHSV 1627
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 2320 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2377
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG+ + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 2378 KLGHGSRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 2423
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ +G + C ++ W
Sbjct: 2424 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--GIACGSGDAQTLCLTDDDTVWSWGDGD 2481
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ + + +WG Y LG+G
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHG- 2540
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G I++A G H +
Sbjct: 2541 -SDDHVRRPRQVQGLQGKKAIAIATGSLHCV 2570
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 2307 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG GS P + L EV A G + +++ + G
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 2424
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 2425 KGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTD 2470
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 2471 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVV----RVECGSQFSVALTKAGAV 2526
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + +G++H D +WG
Sbjct: 2527 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDE 2586
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 2587 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR +A G S H A+ G YTWG E G+LGHGD + +P +V L +++ +
Sbjct: 1406 IRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +T++G ++G G+LG G P + L + V CGA F++
Sbjct: 1464 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSL 1523
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYN-------------------------TKDSS 209
L+ + + G Y +LGHG+D DS
Sbjct: 1524 ALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSG 1581
Query: 210 VKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A+ +P + L G+ I +VACG++H+VA
Sbjct: 1582 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 2487 RGGSDGCKV-PMKIDSLTGLGV--VRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDD 2543
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K G H V TEDG +G N GQLG G+ P V
Sbjct: 2544 HVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 2603
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 2604 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 2644
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 1547 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 1604
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 1605 PTLVQGLEGQKITRVACGSSHSVAWT 1630
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 58/333 (17%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C S H V + +G YTWGR + G+LGHGD + P IV L +I +A G
Sbjct: 43 VQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSY 102
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLS 177
HT VT+ G +G +G+LG G+ P V+ L E VT ACG+ TV L+
Sbjct: 103 HTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLT 162
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G + G +GH + + Q PR + +L +T+ +VA
Sbjct: 163 DL--GKVYTWGDKENGVVGHTNADGH-------------QYLPRMLESLQAKTVTQVAAC 207
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT A+ + G ++TWG G +GRLGH ++++ VPR V+ V ++ G +S
Sbjct: 208 GFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRV----GHVACGGFHS 263
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
+ G+LY WG G ++G+
Sbjct: 264 AAILDSGELYTWGG----------------------------------GEHGQVYTFGNG 289
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+G+LG+G + ++P V L MHV+ VA
Sbjct: 290 DHGKLGHGDV--RKVSVPTLVAGLVKMHVVKVA 320
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 132 LAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG 188
L + W + GQLG G ++ P V L S+ V ACG+ TV LS E ++ G
Sbjct: 8 LVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLS--EDGAVYTWG 65
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGHG DN + + PR + AL G+ IV+ CG+ HT AV KG
Sbjct: 66 RGDDGRLGHG-DNGW-------------KYVPRIVEALEGQRIVQATCGSYHTAAVTDKG 111
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YG+LGH + P V + + I+ GS ++ G++Y
Sbjct: 112 ELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQ--IACGSRHTVVLTDLGKVYT 169
Query: 309 WGKLKN------NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
WG +N N D Y P+ L L + + + H + A +WG ++G
Sbjct: 170 WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFG 229
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
LG+G +++ +P+ V+ L G V VACG HS I+D
Sbjct: 230 RLGHGM--ERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 29/240 (12%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAG 116
R V A C S H AV +G YTWG G+LGHG++ P +V L ++ +
Sbjct: 93 RIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIA 152
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G HTVV+T+ G +G ++G +G + + ++ P + L ++ F
Sbjct: 153 CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTA 212
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ G I G ++G+LGHG + Q PR + AL G+ + VA
Sbjct: 213 ALTAAG-EIFTWGEGKFGRLGHGMERN--------------QMVPRMVEALMGKRVGHVA 257
Query: 236 CGTNHTVAVDSKGYVYTWG---------FGG--YGRLGHREQKDEWVPRRVDVFQRNNVL 284
CG H+ A+ G +YTWG FG +G+LGH + + VP V + +V+
Sbjct: 258 CGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVV 317
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
DG+ P L L + VAA H A+ G +TWG + G+LGHG + +
Sbjct: 184 DGHQYLPRMLESLQAKTVTQVAA--CGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT-----------EDGNSLAFGWNKHGQLGSGSIRN 149
P +V L ++ G H+ + E G FG HG+LG G +R
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301
Query: 150 EIEPSPVRCLV 160
P+ V LV
Sbjct: 302 VSVPTLVAGLV 312
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG----- 88
GR ++ N + P + L+G + VA C H A+ G YTWG E G
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVA--CGGFHSAAILDSGELYTWGGGEHGQVYTF 286
Query: 89 ------QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
+LGHGD + PT+V+ L K + K + HT +
Sbjct: 287 GNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
A C S H VA+ G +WGR E GQLGHG + P +S L+ I+ G +
Sbjct: 17 AVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEY 76
Query: 122 TVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
T+ V G ++GW G+LG G + P P+ V ACG T+ + +
Sbjct: 77 TIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTL-VVAG 135
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
EG + G Q GQLG G N+ + P+ + AL GE + VACG+
Sbjct: 136 EG-ELFTFGRNQNGQLGLGHTNDCLS--------------PQLVVALQGERVRSVACGSE 180
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++A G V++WG+G YG LG E +D ++P RV + ++ E G +S+
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAE----CGWRHSAV 236
Query: 300 TAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--C 351
+ G+++ +G K +GD D P + L + + +G H + ADSS
Sbjct: 237 VSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV-AGGWRHTMAADSSGNL 295
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDI---LEGMHVISVACGYGHSLVIVD 401
WG ++G+LG G SS P V + L G V V CG+ H++ + +
Sbjct: 296 YGWGWNKFGQLGLG----DSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTE 344
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 34/332 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L I V G VA G+ Y+WG + G+LGHGD P +
Sbjct: 54 LAPKAISTLTDAGIESVVCGAEYTIAVAPS-RGQVYSWGWGDFGRLGHGDCNDVFVPRPI 112
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
S + + G +HT+VV +G FG N++GQLG G + + P V L E V
Sbjct: 113 EFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERV 172
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PR 221
+ ACG++ + L++ E ++ + G +YG LG G E+Q R P
Sbjct: 173 RSVACGSEHS--LAATESGTVFSWGWGRYGNLGDG----------------ESQDRYLPT 214
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L G +V CG H+ V G V+T+G+ YG+LGH + D VP +V +
Sbjct: 215 RVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT 274
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM---DLSGWNLR 334
+ + ++ G ++ G LY WG K GD P P++ L+G +
Sbjct: 275 RI----SSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVS 330
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ G H V SWG G+LG+G
Sbjct: 331 LVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHG 362
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 20/228 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +SP + L G +R VA C S H +A G ++WG G LG G+ R PT
Sbjct: 157 DCLSPQLVVALQGERVRSVA--CGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPT 214
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
V L ++ A G H+ VV+EDG FGW+K+GQLG G + P V L +
Sbjct: 215 RVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT 274
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+++ A G T +++ ++ G ++GQLG G ++ +P P
Sbjct: 275 RISSVAGGWRHT--MAADSSGNLYGWGWNKFGQLGLGDSSD--------------RPSPV 318
Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+ ALAG+ + V CG HTVAV G VY+WG G G+LGH ++D
Sbjct: 319 LVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 26/288 (9%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ P + G + VA C H + V EG +T+GRN+ GQ
Sbjct: 92 WGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVA--CGDTHTLVVAGEGELFTFGRNQNGQ 149
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P +V L +++ G H++ TE G ++GW ++G LG G ++
Sbjct: 150 LGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQD 209
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ V L + + CG + +S E + G +YGQLGHG + D
Sbjct: 210 RYLPTRVVGLEGIRMVSAECGWRHSAVVS--EDGRVFTFGWSKYGQLGHG-----DHTDR 262
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+V P +AAL I VA G HT+A DS G +Y WG+ +G+LG + D
Sbjct: 263 TV---------PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSD 313
Query: 269 EWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN 314
P V L + V ++ G ++ GG++Y WG+ N
Sbjct: 314 RPSPVLV-----GGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVN 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 29/294 (9%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGA 170
+ G SH+V + G ++G + GQLG G + P + L + + + CGA
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++T+ ++ G + + G +G+LGHG N+ PR I +G
Sbjct: 75 EYTIAVAPSRG-QVYSWGWGDFGRLGHGDCNDVFV--------------PRPIEFFSGRP 119
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+ +VACG HT+ V +G ++T+G G+LG D P+ V Q V +
Sbjct: 120 VHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRS----V 175
Query: 291 SAGSVNSSCTAGGGQLYM--WGKLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHH- 343
+ GS +S G ++ WG+ N GD D P ++ L G + + G H
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
V D ++G ++YG+LG+G + ++ +P +V L + SVA G+ H++
Sbjct: 236 VVSEDGRVFTFGWSKYGQLGHGDHTDRT--VPCQVAALRHTRISSVAGGWRHTM 287
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 66/229 (28%)
Query: 231 IVKVACGTNHTVAVDS-------------------------------------------- 246
+ V+CG++H+VA+ S
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74
Query: 247 ---------KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+G VY+WG+G +GRLGH + D +VPR ++ F P ++ G ++
Sbjct: 75 EYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGR----PVHRVACGDTHT 130
Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-S 350
AG G+L+ +G+ +N + +D + P+ ++ L G +R + G+ H +S +
Sbjct: 131 LVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGT 190
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG +YG LG G + +P +V LEG+ ++S CG+ HS V+
Sbjct: 191 VFSWGWGRYGNLGDGE--SQDRYLPTRVVGLEGIRMVSAECGWRHSAVV 237
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 125 bits (313), Expect = 7e-26, Method: Composition-based stats.
Identities = 100/362 (27%), Positives = 158/362 (43%), Gaps = 51/362 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P R+ L I ++ G H V +D Y+WG + GQLGHG + P +
Sbjct: 1238 TPMRVESLKQTPIMMMSLG--GEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIE 1295
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--- 162
E + KI G HT+V+ G+ AFG N+HGQLG +++ + P P R ++
Sbjct: 1296 EFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHL-PIPTRVNTADIHH 1354
Query: 163 ------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
VT CG +V +S + + G GQLGHG+ E+
Sbjct: 1355 AGQPTRVTGIFCGHSHSVLRTS--HGDVYSFGANAKGQLGHGST--------------ES 1398
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ I ++ CG HTV VY WG G + LG K+E VP+ V+
Sbjct: 1399 CRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVE 1458
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTA------GGGQLYMW-----GKLKNNGD------DW 319
+F V E V+ ++ T GG +Y+ GKL GD D
Sbjct: 1459 LFVNKRV---ERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDK 1515
Query: 320 MYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
YP + ++ N+ + SG + + ++ + WG +G++G G + + +P +V
Sbjct: 1516 AYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIGNGK--NQDTWIPTRV 1573
Query: 379 DI 380
+
Sbjct: 1574 SL 1575
Score = 111 bits (278), Expect = 7e-22, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPL----VGVDIRFVAAGCVSCHCVAVD 74
GG+L GS +G L +L PTR+ G R C H V
Sbjct: 1318 GGDLFAFGSNEHGQLGLND--LKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRT 1375
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y++G N +GQLGHG P ++ L IK+ G HTVV T+ + +
Sbjct: 1376 SHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCW 1435
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS-----SVEGASILNAG 188
G +H LG+GS +NE+ P V V++ V CG T L+ S G ++ G
Sbjct: 1436 GQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICG 1495
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
++G+LG G D + S+ AY P I ++ +V +A G + S G
Sbjct: 1496 SSEHGKLGIGGD----PRSPSLDKAY-----PAIIPSINSANVVDLASGAEFNALITSNG 1546
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+Y WG G +G++G+ + +D W+P RV + N
Sbjct: 1547 ALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKN 1580
Score = 95.1 bits (235), Expect = 8e-17, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 126/297 (42%), Gaps = 31/297 (10%)
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACG 169
K G H V+T DG +G N GQLG G + + +P+R + + + G
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLG 1256
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ TV + I + G +YGQLGHG +N P+ I AG+
Sbjct: 1257 GEHTVVID--RSFHIYSWGNGKYGQLGHGVSTPHNL--------------PKRIEEFAGQ 1300
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEA 288
I +A G HT+ + S G ++ +G +G+LG + K +P RV+ ++ P
Sbjct: 1301 KISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTR 1360
Query: 289 V--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGN 340
V I G +S G +Y +G + + YPK + L G N++ + G
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420
Query: 341 MHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
H V D S WG ++ LG G K+ +PK V++ V V CG H+
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTG--SNKNELVPKLVELFVNKRVERVVCGLYHT 1475
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 53/279 (18%)
Query: 151 IEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P P +R + +CG + ++ V+G + G GQLGHG
Sbjct: 1183 VHPMPALRFNEKHAKSVSCGWEHAAVIT-VDG-ELFTWGNNTSGQLGHGL---------- 1230
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
A + Q P + +L I+ ++ G HTV +D ++Y+WG G YG+LGH
Sbjct: 1231 --AAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH 1288
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKP 324
+P+R++ F + + I+ G ++ GG L+ +G +L N P P
Sbjct: 1289 NLPKRIEEFAGQKI----SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIP 1344
Query: 325 LMDLSGWNLRCMDSGNMHH----------FVGADSSCI--------SWGHAQYGELGYGP 366
+++ ++HH F G S + S+G G+LG+G
Sbjct: 1345 TR---------VNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG- 1394
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+S PK + L+G ++ + CG H++V D +V
Sbjct: 1395 -STESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSV 1432
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 43/293 (14%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P ++ L G++I+ +A C HC+A+ +G ++WGRN+ GQ
Sbjct: 93 WGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIA--CGDSHCLAITGDGEVHSWGRNQNGQ 150
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P V+ +K AG HT VTE G +GW ++G LG G +
Sbjct: 151 LGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRND 210
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY----- 203
+ P V + E + ACG T+ + ++ G +YGQLGHG ++
Sbjct: 211 RLVPGEVAAVPGEKMNLVACGWRHTI--AVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQ 268
Query: 204 --NTKDSSVKLA-------------------------------YEAQPRPRAIAALAGET 230
K+ +++ + P+ I + E
Sbjct: 269 VQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEK 328
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ +V CG HTVA+ +G VY+WG G G+LGH + D VP+R+++ + +
Sbjct: 329 VTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGL 381
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R ++ + H VA+ +WGR E GQLGHGD +R P ++S L +I G
Sbjct: 15 RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCG 74
Query: 119 RSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
HT +E ++ ++GW G+LG G+ + P ++ L E+ ACG L
Sbjct: 75 ADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHC--L 132
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + + G Q GQLG G +T+D V P +AA G + +A
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLG-----HTEDVLV---------PNKVAAFEGIAVKMLAA 178
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA--VISAGS 294
G HT AV G +Y WG+G YG LG ++ D VP V +P E +++ G
Sbjct: 179 GAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEV------AAVPGEKMNLVACGW 232
Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
++ A G LY +G K +GD D + P + L ++ + SG H V D
Sbjct: 233 RHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAV-SGGWRHTVALD 291
Query: 349 SS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G +S PK + + V V CG+ H++ I DR NV
Sbjct: 292 EDGELYGWGWNKFGQVGCGNTDDHNS--PKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 145/310 (46%), Gaps = 30/310 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG + G+LGHG+ P + L +IK+ G SH + +T DG ++G N++
Sbjct: 89 YSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQN 148
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG G + + P+ V V A GA+ T + E + G +YG LG G
Sbjct: 149 GQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTA--AVTESGKLYGWGWGRYGNLGLG 206
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N+ + P +AA+ GE + VACG HT+AV + G +YT+G+ Y
Sbjct: 207 DRND--------------RLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKY 252
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
G+LGH + +D VP +V + + +S G ++ G+LY WG K
Sbjct: 253 GQLGHGDFEDHLVPHQVQALKNKTI----QAVSGGWRHTVALDEDGELYGWGWNKFGQVG 308
Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKS 371
N DD PK + + + + G H D + SWG G+LG+G +
Sbjct: 309 CGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDR- 367
Query: 372 SAMPKKVDIL 381
+PK++++L
Sbjct: 368 -CVPKRIELL 376
>gi|393233866|gb|EJD41434.1| RCC1/BLIP-II [Auricularia delicata TFB-10046 SS5]
Length = 592
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 186/426 (43%), Gaps = 48/426 (11%)
Query: 20 GELLFCGSTCWDAVGRR----KGALD----GNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G ++ G T W +VG++ + A+D +L P LRPL V I V H V
Sbjct: 24 GRIVIAGGTDWPSVGKKDKGGQSAVDQDAHPDLYEPHVLRPLCNVRIVSVHGSPCGSHFV 83
Query: 72 AVDVEGRCYTWGRNERGQLG---------HGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
A+D G + WGRN LG + D +R ++ + A GR HT
Sbjct: 84 AIDYHGVAWLWGRNGSSCLGVDSETTPALYCDSPRRLTAAELNAPRGTRFVHAALGRHHT 143
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP-SPVRCLVS------EVTATACGADFTVW 175
++V G + G N Q G ++EI+ + + L + + + G F+
Sbjct: 144 LLVGSGGQVWSAGLNALAQCGHPPSKSEIKTFTLIENLPTLNGKPDRIVQASAGITFSAL 203
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ E + G ++GQLG+G E + K+ ++ P I L G+ + ++A
Sbjct: 204 LT--ESGRVYTFGSGEHGQLGNGRTGEQLGLNR--KIVFDVVEEPAPIQGLDGKHVEQIA 259
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGS 294
G H++A+ G VYTWG GGY R G Q+ + V F + + AG
Sbjct: 260 SGNQHSIALTKDGLVYTWGSGGYCRTGLSNQETAMTAKLVSAPFTGEHEETRAWKVFAGP 319
Query: 295 VNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF----- 344
NS L++ GK K GD + K + DL+ + SG + HF
Sbjct: 320 TNSIVIDRQRMLWICGKWKLTGDGSAGATYTTFKHINDLTACKVVTAASGGVTHFAVCPD 379
Query: 345 ------VGADSSCI-SWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
AD++ I +WG +A +GELG G S+ P K++ L+G+ VI+VA G HS
Sbjct: 380 DEPAEDAPADATMIVAWGQNASHGELGLGNDAPLSATKPAKIEPLQGVQVIAVAAGQ-HS 438
Query: 397 LVIVDR 402
V + +
Sbjct: 439 TVFLAK 444
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 25/321 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++PT L + + I+ VA HC+A+ +G+ Y+WG + G+LGHG+K D P
Sbjct: 4040 TILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQ 4099
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ L +I G +H+ VT G +G ++G+LG G ++++P V L+
Sbjct: 4100 LIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGF 4159
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG+ L + ++ + G YG+LG G + P
Sbjct: 4160 KVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI--------------PM 4205
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG +VKV CG+ +VA+ G VYTWG G Y RLGH + P+++ Q
Sbjct: 4206 KIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGK 4265
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRC 335
++ I+ GS++ + G+++ WG GD M P+ ++ L G N+
Sbjct: 4266 KII----CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINR 4321
Query: 336 MDSGNMHHFVGADSSCISWGH 356
+ G+ H + + S H
Sbjct: 4322 VACGSAHSLAWSTNKSTSATH 4342
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 21/270 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ +P +L L I+ VA H +A+ ++G+ ++WG E G+LGH +++ DRP
Sbjct: 3057 NVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPK 3116
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ L +I+ G SH+ ++ G +G ++G+LG G ++ P V+ L+
Sbjct: 3117 MIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGH 3176
Query: 162 EVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ ACG+ D S EG + + G +G+LG G E P
Sbjct: 3177 HIVQVACGSRDAQTLALSAEGL-VFSWGDGDFGKLGRG--------------GSEGCDIP 3221
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
I L G + + CG ++A+ G VYTWG G Y RLGH + P V+
Sbjct: 3222 HNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSE 3281
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ ++ G+++ C GQ+Y WG
Sbjct: 3282 KKIVH----VAVGALHCLCATDQGQVYAWG 3307
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 42/364 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
S T L+P+ +A G S V+ D G+ Y G G+LG G P ++
Sbjct: 3014 SLTALKPI------HIAGGSKSLFIVSYD--GKLYACGEGTNGRLGLGHSNNVATPCQLT 3065
Query: 106 ELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
L++Y IKK +G H + +T DG ++G + G+LG + + P + L S+
Sbjct: 3066 SLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR 3125
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG+ + +SS + GL +YG+LGHG DN Q RP+
Sbjct: 3126 IRDIACGSSHSAAISST--GELFTWGLGEYGRLGHG-DN-------------LTQLRPKL 3169
Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ AL G IV+VACG+ T+A+ ++G V++WG G +G+LG + +P ++
Sbjct: 3170 VKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNG 3229
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM--DLSGWNLR 334
V +I G+ S GQ+Y WGK +G D KP + LS +
Sbjct: 3230 LGV----CMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIV 3285
Query: 335 CMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G +H D +WG +G+ G G P V LEG+ V VACG
Sbjct: 3286 HVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRK--PSLVLNLEGVRVNRVACGS 3343
Query: 394 GHSL 397
HS+
Sbjct: 3344 SHSI 3347
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 30/335 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT LS + + G + VT DG A G+
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGY 4027
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LS+ + + G G
Sbjct: 4028 GAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALST--DGKVYSWGEGDDG 4085
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG N + P+ I AL G+ IV +ACG H+ AV + G +YTW
Sbjct: 4086 KLGHGNKNGCD--------------HPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTW 4131
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ V+ + +G + C ++ W
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVI--DIACGSGDAQTLCITDDDNVWSWGDGD 4189
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 4190 YGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 4248
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ PKK+ L+G +I +A G H + D
Sbjct: 4249 -SDEHVRHPKKIAALQGKKIICIATGSLHCVACSD 4282
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
+AV +G+ Y G G+LG G PT++ + IKK +G H + ++ D
Sbjct: 4014 LAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTD 4073
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G G+LG G+ P + L E+ ACG + +++ G I
Sbjct: 4074 GKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA--GGEIYTW 4131
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + L G ++ +ACG+ T+ +
Sbjct: 4132 GKGRYGRLGHG--------DS------EDQMKPKLVETLIGFKVIDIACGSGDAQTLCIT 4177
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG +P +++ V+ E GS S G
Sbjct: 4178 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVE----CGSQFSVALTRSGS 4233
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + D+ + +PK + L G + C+ +G++H +D +WG
Sbjct: 4234 VYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDND 4293
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G ++ VACG HSL
Sbjct: 4294 EGQLGDG--TMNAIHRPRLVVTLQGKNINRVACGSAHSL 4330
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ LVG ++ ++ G + + AV G YTWGR G+LGHG PT+V
Sbjct: 564 PTKITELVGKNVIHISCG--ATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVG 621
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLVS 161
L Y I G+G + T+ VT G L F W G G+ ++ +P +
Sbjct: 622 LKDYFIVDIACGSGDAQTLAVTNTG--LVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI 679
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
EV CG+ F++ L+ + S+ G +LGHG++N P+
Sbjct: 680 EVARVYCGSQFSLALT--KSGSVYTWGKGDNHRLGHGSENHVRF--------------PK 723
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L G+ I KVA G+ H +A+ G VY WG G++G + + P + + Q
Sbjct: 724 LVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGK 783
Query: 282 NVL 284
N++
Sbjct: 784 NIV 786
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 21/270 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ G +I +AA H +A+ +G Y+WG + G+LGHGD RD+PT ++E
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE 569
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + G +++ VT G +G +G+LG G+ + P+ V L +
Sbjct: 570 LVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVD 629
Query: 166 TACGADFTVWLSSVEGASILNAGLP-QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + ++ N GL +G G+G + S P+ I
Sbjct: 630 IACGS------GDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKT---------PKLIE 674
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L + +V CG+ ++A+ G VYTWG G RLGH + P+ V+ +
Sbjct: 675 KLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCI- 733
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
++ GS + G++Y WG+ N
Sbjct: 734 ---KKVAVGSGHVLALTDDGEVYGWGRNDN 760
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 25/216 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG +N ++ +P I L G+ ++ ++CG ++ AV S G VYT
Sbjct: 551 GRLGHGDNN--------------SRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYT 596
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG G YGRLGH +D VP V + ++ + +G + G ++ WG
Sbjct: 597 WGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIV--DIACGSGDAQTLAVTNTGLVFSWGDG 654
Query: 311 ----KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYG 365
D PK + L + + G+ S S +WG LG+G
Sbjct: 655 GYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHG 714
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ PK V+ L G + VA G GH L + D
Sbjct: 715 --SENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTD 748
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
E+SK A A H++ ++ DG+ ++G G+LG G + +P+ + LV V
Sbjct: 520 EISKLA---AHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVI 576
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+CGA ++ ++S + G YG+LGHGT ++ P +
Sbjct: 577 HISCGATYSAAVTS--SGEVYTWGRGNYGRLGHGTSEDHTV--------------PTLVV 620
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L IV +ACG+ T+AV + G V++WG GGYG+LG P+ ++ Q
Sbjct: 621 GLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIE 680
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCM 336
V A + GS S G +Y WGK N+ + +PK + L+G ++ +
Sbjct: 681 V----ARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKV 736
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G+ H + D WG G++G + + + P + +L+G +++ + CG
Sbjct: 737 AVGSGHVLALTDDGEVYGWGRNDNGQVG--ETSETNVSEPTLLTLLQGKNIVDIDCGPNQ 794
Query: 396 SL 397
S+
Sbjct: 795 SI 796
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 93/242 (38%), Gaps = 53/242 (21%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G +TWG E G+LGHGD + + RP +V
Sbjct: 3115 PKMIEALKSKRIRDIACG--SSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKA 3172
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK--HGQLGSG-----SIRNEIEPSPVRCL 159
L + I + G + L F W G+LG G I + IE R
Sbjct: 3173 LLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIE----RLN 3228
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN--------EYNTKDSSVK 211
V CGA F++ L+ + G Y +LGHG+D E ++ V
Sbjct: 3229 GLGVCMIECGAQFSLALTKF--GQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVH 3286
Query: 212 LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
+A A +P + L G + +VACG++H+
Sbjct: 3287 VAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHS 3346
Query: 242 VA 243
+A
Sbjct: 3347 IA 3348
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
DI C S +A+ G YTWG+ + +LGHG + P +V L+ IKK
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVA 737
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVW 175
G H + +T+DG +G N +GQ+G S N EP+ + L + CG + ++
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797
Query: 176 LSSVEGASI 184
SS SI
Sbjct: 798 WSSSNTYSI 806
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ PT + L I VA G + C C A D +G+ Y WG N+ GQ G+G + +
Sbjct: 3267 DQHVRKPTLVESLSEKKIVHVAVGALHCLC-ATD-QGQVYAWGDNDHGQQGNGTILVNRK 3324
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
P++V L ++ + G SH++ T
Sbjct: 3325 PSLVLNLEGVRVNRVACGSSHSIAWT 3350
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P I G+ I K+A + H++A+ G VY+WG G GRLGH + P ++
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE 569
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSG 330
NV+ IS G+ S+ G++Y WG+ N G +D P ++ L
Sbjct: 570 LVGKNVIH----ISCGATYSAAVTSSGEVYTWGR-GNYGRLGHGTSEDHTVPTLVVGLKD 624
Query: 331 W---NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ ++ C SG+ ++ + SWG YG+LG G G S PK ++ L+ + V
Sbjct: 625 YFIVDIAC-GSGDAQTLAVTNTGLVFSWGDGGYGKLGTG--GSDGSKTPKLIEKLQDIEV 681
Query: 387 ISVACGYGHSLVI 399
V CG SL +
Sbjct: 682 ARVYCGSQFSLAL 694
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVS-PTRLRPLVGVDIRFVA 62
L+A + T G++ GS + +GR G +D S P +R L D + V
Sbjct: 97 LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGR--GQVDSASTSIPRMVRGLA--DHKVVQ 152
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
C S H V + G+ YTWG N GQLG +K ++ P VS +S I + AG H
Sbjct: 153 VACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHN 212
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
+V+T G A+G N GQLG G ++ P+ V+ L ++ + A ACG D ++ L+ G
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGG 272
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
AG+ YGQLGH T N + PR + L G ++ ++ACG H+
Sbjct: 273 VFTFGAGM--YGQLGHNTSNN--------------ELLPRKVFELMGSSVTQIACGRKHS 316
Query: 242 VA-VDSKGYVYTWGFGGYGRLG 262
+A V S G VY +G GG G+LG
Sbjct: 317 IAYVPSSGRVYVFGLGGNGQLG 338
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
H + G+ +TWG NE QLG G D P +V L+ +K+ + G +HTV +T
Sbjct: 105 HSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT 164
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASIL 185
G +G N HGQLG + + EP V C+ + A GAD + L+ + GA +
Sbjct: 165 ATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT-ISGA-LF 222
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G +GQLG G D + P + L + I +ACG +H++A+
Sbjct: 223 AWGCNSFGQLGVGDDQDRGA--------------PTLVKTLRNQGICALACGDDHSLALT 268
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G V+T+G G YG+LGH +E +PR+V
Sbjct: 269 RDGGVFTFGAGMYGQLGHNTSNNELLPRKV 298
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 40/375 (10%)
Query: 29 CWDAVGRRKGALDG----NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CW ++ + L G + P +R V++ +A G H + V +GR + G
Sbjct: 13 CWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQ--HTLFVKKDGRVLSCGN 70
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
N+ GQLGH + RP ++ L + + +A +G H+ V+T+ G +G N+ QLG
Sbjct: 71 NDYGQLGHEKPCK--RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGR 128
Query: 145 GSIRNEIEPSP--VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
G + + P VR L +V ACG+ TV L++ I G +GQLG
Sbjct: 129 GQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTAT--GQIYTWGSNNHGQLGLANKT 186
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
N P+ ++ ++G IV+VA G +H + + G ++ WG +G+L
Sbjct: 187 PQN--------------EPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQL 232
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKL-KNN 315
G + +D P V + + ++ G +S G ++ M+G+L N
Sbjct: 233 GVGDDQDRGAPTLVKTLRNQGI----CALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT 288
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYG-PYGQKSS 372
++ + P+ + +L G ++ + G H SS +G G+LG G + S
Sbjct: 289 SNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSP 348
Query: 373 AMPKKVDILEGMHVI 387
AM K + G V+
Sbjct: 349 AMVKGPFVAFGAEVV 363
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 34/338 (10%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY---KIKKAGAGRSHTVVVTEDGN 130
D++ WG GQLG G ++ + T+ E+ + ++ G HT+ V +DG
Sbjct: 6 DLKSSVLCWGSLTHGQLGLGG-LEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGR 64
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGL 189
L+ G N +GQLG + P+ + L V + G + L+ + + G
Sbjct: 65 VLSCGNNDYGQLGHE--KPCKRPALIDSLGERNVLQASSGTKHSTVLT--DAGQVFTWGS 120
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
+ QLG G + ++ +S+ PR + LA +V+VACG+ HTV + + G
Sbjct: 121 NEDNQLGRG---QVDSASTSI---------PRMVRGLADHKVVQVACGSAHTVGLTATGQ 168
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YTWG +G+LG + + P+ V P ++AG+ ++ G L+ W
Sbjct: 169 IYTWGSNNHGQLGLANKTPQNEPQWVSCISGL----PIVRVAAGADHNLVLTISGALFAW 224
Query: 310 -----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
G+L D D P + L + + G+ H + D ++G YG+L
Sbjct: 225 GCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQL 284
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+ + +P+KV L G V +ACG HS+ V
Sbjct: 285 GHN--TSNNELLPRKVFELMGSSVTQIACGRKHSIAYV 320
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 33/340 (9%)
Query: 53 LVGVDIRFVAAG--CVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L G D+ +A+ C + H A D + + Y+WG + G+LGHG+ P + L
Sbjct: 66 LSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQG 125
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATAC 168
KIK+ G SH + VT+ G ++G N++GQLG G+ + + P + V A
Sbjct: 126 IKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAA 185
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
GA+ T + +E + G QYG LG G N+ + P ++++ G
Sbjct: 186 GAEHTA--AILEDGDLYGWGWGQYGNLGLGDRND--------------RLVPEKVSSVEG 229
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E +V VACG HTV V S G +YT+G+ YG+LGH + +D VP +++ + + +
Sbjct: 230 EKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFI----S 285
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
I+ G ++ AG G+LY WG K + D P ++ + + G H
Sbjct: 286 QIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRH 345
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ + + SWG G+LG+G +++ PK +D L
Sbjct: 346 TLALTENKNVFSWGRGTSGQLGHGEIIDRNT--PKMIDAL 383
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 34/358 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG- 116
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S I
Sbjct: 22 VALVSAG--ANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVI 79
Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
G HT +++ L ++GW G+LG G+ + P P+ L ++ ACG
Sbjct: 80 CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC- 138
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + + + G Q GQLG G NT+DS + P+ I A G + +
Sbjct: 139 -LAVTDAGQVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIHAFEGVCVKMI 183
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G HT A+ G +Y WG+G YG LG ++ D VP +V + ++ +++ G
Sbjct: 184 AAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMV----LVACGW 239
Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
++ + G LY +G K +GD D + P L L + + G H V
Sbjct: 240 RHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAG 299
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D WG ++G++G S P +V + V VACG+ H+L + + NV
Sbjct: 300 DGKLYGWGWNKFGQVGVADNVDHCS--PVQVIFPDEQKVAQVACGWRHTLALTENKNV 355
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ P + L G+ I+ +A C HC+AV G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIA--CGDSHCLAVTDAGQVHSWGRNQNGQ 157
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + +K AG HT + EDG+ +GW ++G LG G +
Sbjct: 158 LGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRND 217
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + E + ACG TV +SS + G +YGQLGHG
Sbjct: 218 RLVPEKVSSVEGEKMVLVACGWRHTVTVSS--SGDLYTYGWSKYGQLGHGD--------- 266
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL I ++A G HT+AV G +Y WG+ +G++G + D
Sbjct: 267 -----FEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVD 321
Query: 269 EWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
P +V + P E A ++ G ++ ++ WG+
Sbjct: 322 HCSPVQV-------IFPDEQKVAQVACGWRHTLALTENKNVFSWGR 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 38/309 (12%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
V E + + AG +H+V + ++G + GQLG G + E PV L+S
Sbjct: 14 VPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHG----DAEDRPVPTLLSGF 69
Query: 164 ------TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
+ CGAD T S E + + G +G+LGHG N+ D
Sbjct: 70 DVPGIASVVICGADHTTAYSD-EQMQLYSWGWGDFGRLGHG-----NSSDVF-------- 115
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ I AL G I ++ACG +H +AV G V++WG G+LG +D +P+++
Sbjct: 116 -HPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHA 174
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGW 331
F+ V +I+AG+ +++ G LY WG+ N G +D + P+ + + G
Sbjct: 175 FEGVCV----KMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGE 230
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H V + ++G ++YG+LG+G + + +P K++ L+ + +A
Sbjct: 231 KMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDRFISQIA 288
Query: 391 CGYGHSLVI 399
G+ H++ +
Sbjct: 289 GGWRHTMAV 297
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+T+ V+ G NH+VA+ S V +WG G G+LGH + +D VP + F +
Sbjct: 20 QTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGI--ASV 77
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + QLY W G+L + N D +P+P+ L G ++ + G+ H
Sbjct: 78 VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSH 137
Query: 343 HFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
D+ + SWG Q G+LG G + S +P+K+ EG+ V +A G H+ I++
Sbjct: 138 CLAVTDAGQVHSWGRNQNGQLGLG--NTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILE 195
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ A + + SP ++ + + + C H +A+ ++WGR GQ
Sbjct: 308 WNKFGQVGVADNVDHCSPVQV--IFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQ 365
Query: 90 LGHGDKIQRDRPTIVSELS 108
LGHG+ I R+ P ++ LS
Sbjct: 366 LGHGEIIDRNTPKMIDALS 384
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 161/369 (43%), Gaps = 48/369 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ--RDRPT 102
+SP L G +I + G + H A+D EG+ YTWG NE QLGHG Q + P
Sbjct: 35 LSPRILETFEGKNIAKLDFG--ATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPR 92
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-----RNEIEPSPVR 157
+V L KI G HT V E+G +GW GSG++ +E P VR
Sbjct: 93 VVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVR 152
Query: 158 CLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
LV + V + CG TV L+ + I G +YG+LG+G + +
Sbjct: 153 TLVDQGVPVKSVECGELHTVALT--KDGEIWAWGNGEYGRLGNGASDNFEV--------- 201
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH------REQKD 268
P + A E I ++ G + T A+ G VY+WG + +LG
Sbjct: 202 -----PEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNM 256
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-KLKNNGDDWMYPKPLMD 327
E +P V+ NV A +SAG +++ G+++MWG KL W+ P +
Sbjct: 257 ETIPVVVEALSNVNV----AQVSAGYDHAAAVTNDGKMFMWGAKL------WLEPHEMTI 306
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G + + A + ++G LG+G +K+ P V+ L +V
Sbjct: 307 LKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGE--RKTQLQPLLVESLNRYNV 364
Query: 387 ISVACGYGH 395
+S+ CGY H
Sbjct: 365 VSMTCGYSH 373
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 131 SLAFGWNK--HGQLGSGS-----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSV---E 180
S F W GQLG GS IR+ E R L + DF S+ E
Sbjct: 5 STVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKE 64
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G + G +Y QLGHG+ N+ + Q PR + AL G IV ++CG H
Sbjct: 65 G-KLYTWGSNEYHQLGHGSSNQ------------DIQSIPRVVDALRGIKIVDISCGEYH 111
Query: 241 TVAVDSKGYVYTWGFG-----GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
T AVD +G ++TWG+G G G LGH +DE +PR V V P + G +
Sbjct: 112 TGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGV--PVKSVECGEL 169
Query: 296 NSSCTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ G+++ W G+L N D++ P+P+ + N+ + +G F +
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229
Query: 349 SSCISWGHAQYGELGYG------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
SWG + +LG G Y ++ +P V+ L ++V V+ GY H+ + +
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMET--IPVVVEALSNVNVAQVSAGYDHAAAVTN 286
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 141/349 (40%), Gaps = 60/349 (17%)
Query: 73 VDVEGRCYTWGRNERGQLGHG--------DKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
+ + +TWG +GQLGHG + P I+ I K G +H+
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS-EVTATACGADFTVWLSSVEG 181
+ ++G +G N++ QLG GS +I+ P V L ++ +CG T G
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHT-------G 113
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY---EAQPRPRAIAALA--GETIVKVAC 236
A L +G G +T S L + E + PR + L G + V C
Sbjct: 114 AVDEEGKLFTWGWGG-------STMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVEC 166
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G HTVA+ G ++ WG G YGRLG+ + VP V+ F N+ A ISAG
Sbjct: 167 GELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENI----ASISAGRDF 222
Query: 297 SSCTAGGGQLYMWG-----KLKNNGD---DWM----YPKPLMDLSGWNLRCMDSGNMH-H 343
+ G++Y WG +L G D+ P + LS N+ + +G H
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V D WG + E P ++ IL+ +ISV CG
Sbjct: 283 AVTNDGKMFMWGAKLWLE-------------PHEMTILKDETIISVQCG 318
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D ++ C + A+ G +T+G+ LGHG++ + +P +V L++Y +
Sbjct: 309 DETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMT 368
Query: 117 AGRSHTVVVTE 127
G SH +T+
Sbjct: 369 CGYSHMGALTK 379
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ P L L I+ VA H +A+ ++GR ++WG E G+LGHG+KI DRP
Sbjct: 2724 NVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPK 2783
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+V L +I+ G SH+ VT G +G ++G+LG G +++P VR L E
Sbjct: 2784 LVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHE 2843
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG+ L+ E + + G +G+LG G + SS+ P+
Sbjct: 2844 RVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKG-----GSDGSSL---------PQ 2889
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L + +++V CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2890 NVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADK 2949
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
NV+ +S G+++ G++Y WG
Sbjct: 2950 NVIQ----VSVGALHCIAVTDRGEVYAWG 2974
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT + L V + VA HC+A+ G ++WG + G+LGHG K +RP ++
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIE 3753
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L + G +H+ +T G +G ++G+LG G ++++P V L V
Sbjct: 3754 SLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVL 3813
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + + G YG+LG G + P+ I
Sbjct: 3814 DVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKF--------------PQKID 3859
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNV 283
+L ++KV CG+ +VA+ + G VYTWG G Y RLGH + P+ V Q V
Sbjct: 3860 SLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRV 3919
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ GS++ G+++ WG
Sbjct: 3920 IQ----VAVGSLHCVACTDSGEVFTWG 3942
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 40/350 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AG 118
+A G S V+ D G+ + G G+LG G +P +++LS Y IKK +G
Sbjct: 2690 IAGGSKSLFIVSHD--GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSG 2747
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLS 177
H + +T DG ++G + G+LG G+ + P V L + ACG+ + ++
Sbjct: 2748 GRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT 2807
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S + G +YG+LGHG DN Q +P+ + AL+ E +V+VACG
Sbjct: 2808 S--SGELYTWGSGEYGRLGHG-DN-------------VPQLKPKQVRALSHERVVQVACG 2851
Query: 238 TN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+ T+A+ + +VY+WG G +G+LG +P+ V+ V+ E G+
Sbjct: 2852 SRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVE----CGAQ 2907
Query: 296 NSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
S + G+++ WGK L + D + +P+ + +L+ N+ + G +H D
Sbjct: 2908 FSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDR 2967
Query: 350 -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS-VACGYGHSL 397
+WG +G+ G G ++ + +K I+ G+ I+ VACG HS+
Sbjct: 2968 GEVYAWGDNDHGQQGNG-----NTTVNRKPAIVRGLEAITNVACGSSHSV 3012
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++E + + WG N++ QLG G KI+ P +S K G +V+ DG
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIK--EPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N +P P+ L + A G + L +++G + + G
Sbjct: 2707 FACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALAL-TIDG-RVFSWG 2764
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG K++Y+ RP+ + +L + I VACG++H+ AV S G
Sbjct: 2765 EGEDGKLGHGN-----------KISYD---RPKLVESLKCKRIRDVACGSSHSAAVTSSG 2810
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ--L 306
+YTWG G YGRLGH + + P++V V+ ++ GS ++ A + +
Sbjct: 2811 ELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQ----VACGSRDAQTLALTERHWV 2866
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
Y W GKL G D P+ + L+ + ++ G + + +WG Y
Sbjct: 2867 YSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDY 2926
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L +VI V+ G H + + DR V
Sbjct: 2927 FRLGHG--SDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEV 2970
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 160/374 (42%), Gaps = 36/374 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G + WG N RGQLG + + TI L+ + + G +T DG A G+
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG G + P+ + L V++V + G SS + + G
Sbjct: 3679 GAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSS---GDVFSWGEGDD 3735
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG+ K E RP+ I +L + +V VACG H+ + + G +YT
Sbjct: 3736 GKLGHGS-----------KALCE---RPKLIESLRDKHVVSVACGGAHSACITASGELYT 3781
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
WG G YGRLGH + +D+ P++V+ +NVL + +G + C + G ++ W
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVL--DVACGSGDAQTLCVSRDGLVWSWGDG 3839
Query: 310 --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
GKL G D +P+ + L + ++ G+ + A +WG Y LG+G
Sbjct: 3840 DYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHG 3899
Query: 366 PYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDN 424
+ P+ V L+G VI VA G H + D GE D +G+
Sbjct: 3900 --SEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDS---GEVFTWGDNDEGQLGDGST 3954
Query: 425 EEIDRNSTVPPKKG 438
I R V KG
Sbjct: 3955 NAIQRPKLVASLKG 3968
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 139/310 (44%), Gaps = 35/310 (11%)
Query: 101 PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
PT++ L + + +G H + +T G+ ++G G+LG GS P +
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + V + ACG + +++ + G +YG+LGHG DS E Q
Sbjct: 3755 LRDKHVVSVACGGAHSACITA--SGELYTWGKGRYGRLGHG--------DS------EDQ 3798
Query: 218 PRPRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+P+ + LAG ++ VACG+ T+ V G V++WG G YG+LG P+++
Sbjct: 3799 LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKI 3858
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLM-DL 328
D Q V+ E GS S G +Y WGK L + +D + P+ + L
Sbjct: 3859 DSLQNAGVIKVE----CGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGAL 3914
Query: 329 SGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G++H DS +WG G+LG G + PK V L+G +
Sbjct: 3915 QGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDG--STNAIQRPKLVASLKGKKMN 3972
Query: 388 SVACGYGHSL 397
VACG H++
Sbjct: 3973 RVACGSAHTV 3982
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 44/229 (19%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA- 115
D V+ C H + G YTWG+ G+LGHGD + +P V EL+ + +
Sbjct: 3757 DKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVA 3816
Query: 116 -GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFT 173
G+G + T+ V+ DG ++G +G+LG G P + L + V CG+ F+
Sbjct: 3817 CGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFS 3876
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS---------VKLAY---------- 214
V L++ + G Y +LGHG+++ + +++A
Sbjct: 3877 VALTA--AGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTD 3934
Query: 215 --------------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A RP+ +A+L G+ + +VACG+ HTV+
Sbjct: 3935 SGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTVS 3983
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR VA G S H AV G YTWG E G+LGHGD + + +P V LS ++ +
Sbjct: 2793 IRDVACG--SSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVAC 2850
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +TE ++G G+LG G P V L S+ V CGA F++
Sbjct: 2851 GSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSL 2910
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA--------------------- 213
LS + + G Y +LGHG+D+ +LA
Sbjct: 2911 ALS--KNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRG 2968
Query: 214 -----------------YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+P + L E I VACG++H+VA S G
Sbjct: 2969 EVYAWGDNDHGQQGNGNTTVNRKPAIVRGL--EAITNVACGSSHSVAWSSTG 3018
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 162/365 (44%), Gaps = 37/365 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +R G + VAAG H VA+ G WGRN GQLG+G P VS
Sbjct: 78 PIAVRLPTGTTVAAVAAG--DRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSL 135
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
S +I G H++ +T G+ LA+G N GQLG GS+ + P VR + V A
Sbjct: 136 PSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAA 195
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G D + L++ A++L G + GQLG GT + + RP +
Sbjct: 196 IAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRS--------------RPVPVNL 241
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
G T+ +A G +H++A+ S V WG +G+LG +P V VLP
Sbjct: 242 PTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTV-------VLP 294
Query: 286 PEA---VISAGSVNS-SCTAGGGQLY----MWGKLKN-NGDDWMYPKPLMDLSGWNLRCM 336
A I+AG ++S + T+ G L WG+L N + D P + G L +
Sbjct: 295 VGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISI 354
Query: 337 DSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
S + H V + + ++WG G LG G SA P V + G + S+A G
Sbjct: 355 ASRDSDHNVAITTEGAALAWGLNSQGHLGDG--TTTDSATPVAVSLPAGAALTSIAVGDD 412
Query: 395 HSLVI 399
HSL +
Sbjct: 413 HSLAL 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G N GQLG G+ + EP VR + V A A G +V L+S ++L G
Sbjct: 57 LAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTS--AGTVLAWGRN 114
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLG+GT P A++ +G IV VA G +H++A+ S G +
Sbjct: 115 TEGQLGNGTTTSSG--------------EPVAVSLPSGIRIVAVAVGADHSLALTSTGSL 160
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV----NSSCTAGG-GQ 305
WG G+LG P V LPP ++A + N TA G
Sbjct: 161 LAWGSNDTGQLGDGSVTSSSTPVAVR-------LPPNTTVAAIAAGRDHNLVLTATGPAA 213
Query: 306 LYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L WG + GD D P P+ +G + + G H + +D + ++WG
Sbjct: 214 LLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNS 273
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G+LG G S +P V + G ++A G HSL +
Sbjct: 274 HGQLGDG--TTTGSLLPVTVVLPVGAEATAIAAGRLHSLAL 312
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 160/349 (45%), Gaps = 34/349 (9%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--S 105
T L PL G + ++ G + A+D +GR + WG N G LG G I R+RP +V +
Sbjct: 1474 TDLTPLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLA 1533
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----- 160
L K+ AGR H +V+ + A+G N GQLG G+ N P P++ +
Sbjct: 1534 SLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAG 1593
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
S VT G ++ L + + G +YG+LG GT Y+ +P
Sbjct: 1594 STVTGVWAGDFHSIILDDL--GRLWVWGKNKYGELGDGTTT------------YQTRPVL 1639
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L G ++ V+ G +HTVA+D +G ++ WG GRLG D P +VD+
Sbjct: 1640 VDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSL 1699
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP----LMDLSGWN 332
+ ISAG N+ G+L+ WG L +G +P L L+G
Sbjct: 1700 DG--HKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRK 1757
Query: 333 LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ + +G+ + FV D + +WG YG+LG G ++ P +VD+
Sbjct: 1758 VVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRRLK--PVRVDM 1804
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 21/238 (8%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--EL 107
L PL G + V AG H + +D GR + WG+N+ G+LG G + RP +V L
Sbjct: 1588 LEPLAGSTVTGVWAG--DFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPL 1645
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VT 164
+ K+ AG HTV + E G A+G N G+LG GS + P V + V
Sbjct: 1646 NGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVV 1705
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A + G TV L E + G + G LG GT + +P +
Sbjct: 1706 AISAGGWNTVALD--ELGRLWAWGPNESGLLGDGTTIN------------QHRPVQVDLT 1751
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L G +V V+ G+ + VD +G ++ WG YG+LG + P RVD+ NN
Sbjct: 1752 PLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRVDMSAMNN 1809
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 44/301 (14%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
+ AG H++++ ++G+N+ G LG G+ R+ P +++++ T G
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRP-----VLTDL--TPLGGSTV 1484
Query: 174 VWLSSVEGASILNA----------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
V +S+ GAS A G G LG GT + N +P +
Sbjct: 1485 VSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRN------------RPVLVDL 1532
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
A+L + VA G H + +D + ++ WG G G+LG + + P + V
Sbjct: 1533 ASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLA 1592
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP----LMDLSGWNLRC 335
+ AG +S G+L++WGK K +G +P L+ L+G +
Sbjct: 1593 GSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMA 1652
Query: 336 MDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVAC 391
+ +G HH V D +WG G LG G + P +VD+ L+G V++++
Sbjct: 1653 VSAGE-HHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHR--PVQVDLTSLDGHKVVAISA 1709
Query: 392 G 392
G
Sbjct: 1710 G 1710
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++A G+ H++ +D+K +++WGF G LG +D P D+ +
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGS 1491
Query: 293 GSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGW---NLRCMDSGNMHH 343
G+ S G+L+ WG G D P L+DL+ + + +G H+
Sbjct: 1492 GASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPV-LVDLASLGSSKVTAVAAGRYHN 1550
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVIV 400
V D S + +WGH G+LG G + +P +VD+ L G V V G HS+++
Sbjct: 1551 LVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILD 1610
Query: 401 D 401
D
Sbjct: 1611 D 1611
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 133/272 (48%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P R+ L G I ++ G H V EG YTWG N QLG+G PT I
Sbjct: 88 IEPRRVDHLCGKKIACLSYG-SGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHI 146
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
+ L K+ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 147 STNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNK 206
Query: 163 V-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ T ACG + ++ VE + G GQLG G+ QP P
Sbjct: 207 IATTIACGQMCS--MAVVESGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 250
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + K+ CG HT+ + +G++Y WG YG+LG + ++ P V V +++
Sbjct: 251 RIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSV-EKD 309
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ G +YMWG+ +
Sbjct: 310 RVIEIAACHSAHT--SAAKTQSGHIYMWGQCR 339
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + TE+ G N G LG+G I + IEP V L ++ + G+ V
Sbjct: 53 GSAGNEVLYSTENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHV 112
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ EG + G Y QLG+GT N P I+ L +++
Sbjct: 113 VIATDEG-EVYTWGHNAYNQLGNGTTNH--------------GLVPTHISTNLGNRKVIE 157
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G V+ WG+ G++G ++ +PR+V +N + I+ G
Sbjct: 158 VACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKI---ATTIACG 214
Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
+ S G++Y+WG N G P P + L G + + G H V
Sbjct: 215 QMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLT 274
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
D + +WG YG+LG G +S P V E VI + AC H+
Sbjct: 275 DEGHLYAWGANSYGQLGTGNKSNQSYPTPVSV---EKDRVIEIAACHSAHT 322
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ + + G H + + EG Y WG N GQLG G+K + P
Sbjct: 244 GNQPTPCRIAALQGIRVHKIVCG--YAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYP 301
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
T VS I+ A +HT
Sbjct: 302 TPVSVEKDRVIEIAACHSAHT 322
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 3254 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3313
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3314 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVV 3373
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 3374 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3419
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 3420 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3479
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G Y WG
Sbjct: 3480 ----AIATGSLHCVCCTEDGS-YTWG 3500
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2252 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2311
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2312 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2371
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2372 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 2420
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2421 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2477
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2478 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 2507
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2195 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 2249
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 2250 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 2309
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 2310 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 2362
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 2363 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2413
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 2414 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2469
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 2470 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTL 2527
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 2528 VQGLEGQKITRVACGSSHSV 2547
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 3239 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3296
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 3297 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3342
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ VD Q + V+ + +G + C ++ W
Sbjct: 3343 GKGRYGRLGHSDSEDQLKPKLVDALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 3400
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 3401 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3459
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 3460 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 3489
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 39/345 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 2236
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G L +V+G +
Sbjct: 2237 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVF 2294
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 2295 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALT 2340
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 2341 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 2396
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 2397 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2456
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 2457 GDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 33/338 (9%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3225 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3284
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 3285 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3342
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 3343 GKGRYGRLGHS--------DS------EDQLKPKLVDALQGHRVVDVACGSGDAQTLCLT 3388
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 3389 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 3444
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
+Y WGK L + DD + P+ + L G + + +G++H + +WG
Sbjct: 3445 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGSYTWGDNDE 3504
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3505 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 38/286 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3177 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 3235
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 3236 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3281
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 3282 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3337
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 3338 DLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 3395
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 3396 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3439
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 44/237 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 3309 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDA 3366
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 3367 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 3426
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CG+ F+V L+ + ++ G Y +LGHG+D+
Sbjct: 3427 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3484
Query: 205 -------TKDSSVKL-----------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
T+D S A RPR +AAL G+ + +VACG+ HT+A
Sbjct: 3485 SLHCVCCTEDGSYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 2315 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2372
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 2373 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2432
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2433 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 2490
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
D+ A+ +P + L G+ I +VACG++H+VA
Sbjct: 2491 ALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2467 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2524
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 2525 PTLVQGLEGQKITRVACGSSHSVAWT 2550
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P +++ L G + +A G S HCV +G YTWG N+ GQLG G R
Sbjct: 3461 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQR 3517
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P +V+ L K+ + G +HT+
Sbjct: 3518 PRLVAALQGKKVNRVACGSAHTL 3540
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 151/354 (42%), Gaps = 85/354 (24%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT + L V I+ VA HC+A+ +G ++WG E G+LGHG++ DRP ++
Sbjct: 4019 TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE 4078
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
LS + G +H+ +T G+ L +G ++G+LG G ++++P RC++ T
Sbjct: 4079 ALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPK--RCVLR--TT 4134
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
CG G + + A L + +G + P I +
Sbjct: 4135 IMCGV----------GVTAIMASLAEEVPMGARS--------------------PMKIES 4164
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG ++KV CG+ +VA+ G VYTWG G Y RLGH P++V Q ++
Sbjct: 4165 LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIIS 4224
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G+++ WG + D+
Sbjct: 4225 ----IATGSLHCVACSDSGEVFTWG----DNDE--------------------------- 4249
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G + P+ V L+G H++ V CG H+L +
Sbjct: 4250 --------------GQLGDGTV--TAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4287
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G+L CG GR + N+ +P ++ L ++ VA H +A+ ++G
Sbjct: 2957 QDGKLYACGE---GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDG 3013
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ ++WG E G+LGHG+++ ++P ++ L +I+ G SH+ +T G +G
Sbjct: 3014 KVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3073
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
++G+LG G +++P V L V ACG+ L E + + G +G+LG
Sbjct: 3074 EYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3133
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E P + L G +V++ CG ++A+ G V+TWG G
Sbjct: 3134 RG--------------GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKG 3179
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH + P + + V+ ++ G+++ GQ++ WG
Sbjct: 3180 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVFAWG 3229
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 43/401 (10%)
Query: 11 EEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
+E++ E ++L G + +G KG+ + PT L + ++ G S
Sbjct: 2898 DEQSSNEISSKVLVWGLNDKEQLGGLKGS---KVKLPTYSSVLSQLKPIHISGGSKSLFI 2954
Query: 71 VAVDVEGRCYTWGR--NERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVT 126
V+ D G+ Y G N R LGH + + R V L++Y +KK +G H + +T
Sbjct: 2955 VSQD--GKLYACGEGTNGRLGLGHNNNVPTPRQ--VPILNQYVVKKVAVHSGGKHAMALT 3010
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASIL 185
DG ++G + G+LG G+ +P + L + ACG+ + ++S +
Sbjct: 3011 LDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITS--SGELY 3068
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVA 243
GL +YG+LGHG DN Q +P+ + AL G +V+VACG+ T+
Sbjct: 3069 TWGLGEYGRLGHG-DN-------------CTQLKPKLVTALQGHRVVQVACGSRDAQTLC 3114
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ +G V++WG G +G+LG + VP +V+ V+ I G+ S
Sbjct: 3115 LTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQ----IECGAQFSLALTKI 3170
Query: 304 GQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGH 356
G+++ WGK L + D + P P+ L G + + G +H DS +WG
Sbjct: 3171 GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGD 3230
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+G+ G G + P V L+G+ V VACG HS+
Sbjct: 3231 NDHGQQGSG--NTVVNKKPNLVLGLDGVFVNRVACGSSHSV 3269
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 39/326 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N RGQLG D + PT LS + + G VT DG A G+
Sbjct: 3947 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4006
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ V L + + A G + LSS + + G + G+LG
Sbjct: 4007 GRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4064
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Y+ RP+ I AL+G +V +ACG+ H+ + S+G+V TWG G
Sbjct: 4065 HGNRDSYD--------------RPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKG 4110
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
YGRLGH + +D+ P+R VL + G V + + ++ M +
Sbjct: 4111 RYGRLGHGDSEDQLQPKRC-------VLRTTIMCGVG-VTAIMASLAEEVPMGAR----- 4157
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMP 375
P + L+G + ++ G+ S S +WG Y LG+G P
Sbjct: 4158 ----SPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NTDHVRRP 4211
Query: 376 KKVDILEGMHVISVACGYGHSLVIVD 401
KKV L+G +IS+A G H + D
Sbjct: 4212 KKVAALQGKKIISIATGSLHCVACSD 4237
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
V+P + L GV + +AA C H +A+ G Y+WG E G+LGHGD ++ PT +
Sbjct: 566 VAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKI 625
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
+ L K ++ AG S++ V+ G +G +G+LG G+ ++ P+ V+ L +V
Sbjct: 626 A-LEK-QVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKV 683
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A G+ ++ +G + G +G+LG+G+ N P P I
Sbjct: 684 VDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCN--------------GSPLPVQI 729
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
++ ++ ++ G+ +VA+ G +Y+WG G GRLGH + VP+ V + +
Sbjct: 730 EGVS--SVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKI 787
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ ++ GS + G+LY WG+
Sbjct: 788 VD----VAVGSAHCLALTSSGELYGWGR 811
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + +K+ K+A E Q + + G +++ AV S G ++T
Sbjct: 609 GRLGHG---DTASKEVPTKIALEKQ-------------VTAIYAGASYSAAVSSVGELFT 652
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG G YGRLGH D++VP +V + V+ + + +G +S GG L+ WG
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVV--DVALGSGDAHSMAVTDGGLLFAWGDG 710
Query: 311 ---KLKN---NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
KL N NG P P+ ++ + SG+ + D + SWG G LG
Sbjct: 711 DFGKLGNGSCNGS----PLPVQIEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G + S +PK V LEG ++ VA G H L +
Sbjct: 767 HG--NSEHSNVPKLVHALEGKKIVDVAVGSAHCLAL 800
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 53/246 (21%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
L P L L IR +A G S H A+ G YTWG E G+LGHGD + +P
Sbjct: 3033 TLEKPKLLESLRTKRIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3090
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
+V+ L +++ + G + T+ +TE+G ++G G+LG G S+ +++E
Sbjct: 3091 LVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--- 3147
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
R V CGA F++ L+ + + G Y +LGHGTD
Sbjct: 3148 -RLNGVGVVQIECGAQFSLALTKI--GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3204
Query: 205 --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
DS A+ +P + L G + +VACG
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264
Query: 238 TNHTVA 243
++H+VA
Sbjct: 3265 SSHSVA 3270
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L G+ + + C S VA+ G YTWG+ + +LGHG+ RP V+
Sbjct: 4158 SPMKIESLAGLGV--IKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVA 4215
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G H V ++ G +G N GQLG G++ P V+ L +
Sbjct: 4216 ALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIV 4275
Query: 165 ATACGADFTVWLSSVE 180
CG+ T+ LS+ +
Sbjct: 4276 KVICGSAHTLALSTYQ 4291
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
VA+ +G Y+WG+ G+LGHG+ + P +V L KI G +H + +T G
Sbjct: 746 VALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805
Query: 131 SLAFGWNKHGQL-GSGSIRNEI 151
+G N + Q+ SG R+ I
Sbjct: 806 LYGWGRNDYQQICPSGVSRDPI 827
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
++SG H + +D SWG + G+LG+G + S PK ++ L G+ V+ +ACG
Sbjct: 4036 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHG--NRDSYDRPKLIEALSGIGVVDIACGSA 4093
Query: 395 HSLVIVDRTNV 405
HS I + +V
Sbjct: 4094 HSACITSQGHV 4104
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P +L L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDIQST-IEPRKLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCS--MAVVDTGEVFVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P IAAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ V+ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ V L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHVVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++++WG N G P P + L G
Sbjct: 200 GCLQNKVI---VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D + +WG YG+LG G +S P ++E VI +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRVIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 133/272 (48%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H V EG +TWG N QLG+G P I
Sbjct: 16 IEPRRLESLNGKKIACLSYG-SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 74
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
+ LS ++ + G H++V+T DG A+G+N GQ+GSGS N++ P V CL ++
Sbjct: 75 STNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNK 134
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + ++ V + G GQLG G+ QP P
Sbjct: 135 VVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 178
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + +VACG HT+ + +G VY WG YG+LG + ++ P V V +++
Sbjct: 179 RIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV-VVEKD 237
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A SA + S+ GG +YMWG+ +
Sbjct: 238 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 267
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 27/252 (10%)
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N G LG G +++ IEP + L ++ + G+ + L++ EG + G Y QL
Sbjct: 2 NCCGCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQL 60
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G+GT N P I+ L+ + + +VACG+ H++ + S G V+ WG
Sbjct: 61 GNGTTNH--------------GLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 106
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ G++G ++ +PRRV +N V+ I+ G + S G++Y+WG N
Sbjct: 107 YNNSGQVGSGSTANQLIPRRVTGCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGN 163
Query: 315 N----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
G P P + L G ++ + G H V D + +WG YG+LG G
Sbjct: 164 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 223
Query: 368 GQKSSAMPKKVD 379
+S P V+
Sbjct: 224 SNQSYPAPVVVE 235
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 172 GNQPTPCRIAALQGIRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 229
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
V I+ A +HT
Sbjct: 230 APVVVEKDRIIEIAACHSAHT 250
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA H +A+ VEG Y+WG E G+LGHG++ Q DRP ++
Sbjct: 3256 TPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIE 3315
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L ++ G +H+ VT G +G ++G+LG G +++ P L V
Sbjct: 3316 SLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVI 3375
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + L + ++ + G YG+LG G + P+ +
Sbjct: 3376 DVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PQKVD 3421
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL+ + KV CG+ ++A+ G VYTWG G Y RLGH PR+V Q ++
Sbjct: 3422 ALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKII 3481
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ + G++Y WG
Sbjct: 3482 S----IATGSLHCVACSDQGEVYTWG 3503
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 152/340 (44%), Gaps = 32/340 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT + L+ + + G VT DG A G+
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG G + P+ + + + +V + G SVEG + + G +
Sbjct: 3241 GASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALAL--SVEG-EVYSWGEGED 3297
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + + RPR I +L G+ ++ +ACG H+ V S G +YT
Sbjct: 3298 GKLGHGNRTQCD--------------RPRVIESLRGKEVIDIACGGAHSACVTSSGELYT 3343
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
WG G YGRLGH + +D+ P+ D + V+ + +G + C + ++ W
Sbjct: 3344 WGKGRYGRLGHGDSEDQLRPKMADALKGYRVI--DVACGSGDSQTLCISDDDNVWSWGDG 3401
Query: 310 --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D P+ + LS + ++ G+ S C+ +WG Y LG+G
Sbjct: 3402 DYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG 3461
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P+KV L+G +IS+A G H + D+ V
Sbjct: 3462 --SDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEV 3499
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 34/338 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
V EG+ Y G G+LG G D P V+ LS+Y +KK +G H + +T D
Sbjct: 2252 FVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD 2311
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G ++G G+LG S N +P + L ++ + ACG+ + ++S +
Sbjct: 2312 GKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTS--SGELYTW 2369
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
GL +YG+LGHG DS+ +L RP+ + AL G+ +++VACG+ T+ +
Sbjct: 2370 GLGEYGRLGHG--------DSTTQL------RPKLVKALVGKRVIQVACGSRDAQTLTLT 2415
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+G VY+WG G +G+LG + VP V+ V+ I G+ S GQ
Sbjct: 2416 DEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQ----IECGAQFSLALTKAGQ 2471
Query: 306 LYMWGK----LKNNGDDWMYPKPLMD--LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
++ WGK +G D KP + L G + + G +H D+ +WG
Sbjct: 2472 VWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDND 2531
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+G+ G G + P V LEG+ + VACG HS
Sbjct: 2532 HGQQGDG--STTVNKKPALVQGLEGVRITRVACGSSHS 2567
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 19/243 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ V+G+ ++WG + G+LGH ++ ++P ++ L +I+ G SH+ VT
Sbjct: 2304 HAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G ++G+LG G ++ P V+ LV V ACG+ L+ + + +
Sbjct: 2364 GELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSW 2423
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +G+LG G E P + L G+ ++++ CG ++A+
Sbjct: 2424 GDGDFGKLGRG--------------GSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKA 2469
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+TWG G Y RLGH P+ + + ++ ++ G+++ GQ++
Sbjct: 2470 GQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIH----VAVGALHCLAVTDTGQVF 2525
Query: 308 MWG 310
WG
Sbjct: 2526 AWG 2528
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 51 RPLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
RP V +R + C H V G YTWG+ G+LGHGD + RP + L
Sbjct: 3310 RPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADAL 3369
Query: 108 SKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
Y++ G+G S T+ +++D N ++G +G+LG G P V L S V
Sbjct: 3370 KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVC 3429
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
CG+ F++ L+ + + G Y +LGHG+D+ RPR +A
Sbjct: 3430 KVECGSQFSIALT--KSGCVYTWGKGDYHRLGHGSDDHVR--------------RPRKVA 3473
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AL G+ I+ +A G+ H VA +G VYTWG G+LG PR V Q +
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKI 3532
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3227 FAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVE 3286
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV ACG + ++S +
Sbjct: 3287 GEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTS--SGELYTW 3344
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT--NHTVAVD 245
G +YG+LGHG DS E Q RP+ AL G ++ VACG+ + T+ +
Sbjct: 3345 GKGRYGRLGHG--------DS------EDQLRPKMADALKGYRVIDVACGSGDSQTLCIS 3390
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP++VD V + GS S G
Sbjct: 3391 DDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGV----CKVECGSQFSIALTKSGC 3446
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H +D +WG
Sbjct: 3447 VYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDND 3506
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+ + +VACG H++
Sbjct: 3507 EGQLGDG--TTNAIQRPRIVTALQDKKITNVACGSAHTV 3543
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 149/344 (43%), Gaps = 34/344 (9%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+++ + + WG N++ QLG G KI+ P + LS K+ G VVT +G
Sbjct: 2203 EIQTKVFVWGLNDKDQLGGPRGSKIK--TPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKV 2260
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG GS +N P V L V + A G + L +V+G + + G
Sbjct: 2261 YACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 2318
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH L+ +PR + AL + I +ACG++H+ AV S G
Sbjct: 2319 EGDDGKLGH--------------LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSG 2364
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH + + P+ V V+ + + + G +Y
Sbjct: 2365 ELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVI--QVACGSRDAQTLTLTDEGMVYS 2422
Query: 309 W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G + P + L+G + ++ G + + +WG Y
Sbjct: 2423 WGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFR 2482
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ + L+G +I VA G H L + D V
Sbjct: 2483 LGHGTDSHVRK--PQVAEGLKGKKIIHVAVGALHCLAVTDTGQV 2524
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S +A+ G YTWG+ + +LGHG RP V+ L KI G H V
Sbjct: 3433 CGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVA 3492
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS 183
++ G +G N GQLG G+ P V L ++T ACG+ TV S+ +
Sbjct: 3493 CSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWST---SK 3549
Query: 184 ILNAG-LPQYGQLGHGTDNEYN 204
L+AG LPQ + + E N
Sbjct: 3550 PLHAGRLPQTVPMEYNLLREVN 3571
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P ++ L G I +A G S HCVA +G YTWG N+ GQLG G R
Sbjct: 3463 DDHVRRPRKVAALQGKKIISIATG--SLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQR 3520
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P IV+ L KI G +HTV
Sbjct: 3521 PRIVTALQDKKITNVACGSAHTV 3543
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P L G I VA G + HC+AV G+ + WG N+ GQ G G +
Sbjct: 2488 DSHVRKPQVAEGLKGKKIIHVAVGAL--HCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK 2545
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P +V L +I + G SH+
Sbjct: 2546 PALVQGLEGVRITRVACGSSHS 2567
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 217 QPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
Q P+ ++ L + V +A G+N T+AV G ++++G G YG+LG +P+
Sbjct: 5 QLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKL 64
Query: 275 VDVFQ 279
VD Q
Sbjct: 65 VDKLQ 69
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 92 WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 209
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V + E + ACG T+ +S + ++ G +YGQLGHG
Sbjct: 210 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 258
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+E P + AL TI +++ G HT+A+ S+G +Y WG+ +G++G D
Sbjct: 259 -----FEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313
Query: 269 EWVPRRVDVFQRNNVLP 285
P +V F + LP
Sbjct: 314 HSSPGQVS-FPGSENLP 329
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 49 RLRPLVGVDIRFVAAGCVSC---HCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
RL P V A V C H A + E + Y+WG + G+LGHG+ P V
Sbjct: 53 RLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPV 112
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L KIK+ G SH + VT G ++G N++GQLG G+ + + P ++ S V
Sbjct: 113 KALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCV 172
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA+ T + E + G +YG LG G N+ + P +
Sbjct: 173 KMIAAGAEHTA--AVTEDGDLYGWGWGRYGNLGLGDRND--------------RLLPEKV 216
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+++ GE +V VACG HT+ V G +YT+G+ YG+LGH + +D VP +V+ + + +
Sbjct: 217 SSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTI 276
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ IS G ++ G+LY WG
Sbjct: 277 ----SQISGGWRHTMALTSEGKLYGWG 299
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 31/317 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S I
Sbjct: 15 VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVIC 72
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT +ED + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 130
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG GT T+DS + P+ I A + +A
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFESVCVKMIA 176
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D +P +V + ++ +++ G
Sbjct: 177 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 232
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P + L + + G H + ++
Sbjct: 233 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292
Query: 349 SSCISWGHAQYGELGYG 365
WG ++G++G G
Sbjct: 293 GKLYGWGWNKFGQVGVG 309
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 30/251 (11%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V + GA +V L + G + + G + GQLGHG D+ +L P
Sbjct: 15 VVLVSAGASHSVAL--LTGNVLCSWGRGEDGQLGHG--------DAEDRLV------PTV 58
Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
++ I V CG +HT A + + VY+WG+G +GRLGH D + P+ V Q
Sbjct: 59 LSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL 118
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRC 335
+ I+ G + G++ WG+ +N +D + P+ + ++
Sbjct: 119 KI----KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKM 174
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ +G H V D WG +YG LG G + +P+KV +EG ++ VACG+
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD--RNDRLLPEKVSSVEGEKMVLVACGWR 232
Query: 395 HSLVIVDRTNV 405
H++ + D N+
Sbjct: 233 HTITVSDSGNL 243
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+T+V V+ G +H+VA+ + + +WG G G+LGH + +D VP + F + +
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAI---TS 69
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + Q+Y W G+L + N D P+P+ L G ++ + G+ H
Sbjct: 70 VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 129
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ E + V +A G H+ + +
Sbjct: 130 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G D L+ P+ + L G+ I VAA H +A+ +G Y+WG N+RGQLG G +
Sbjct: 3201 GNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVS 3260
Query: 98 RDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+ P ++ L KY I A H+ VV+ +G+ L FG N GQLG +++ P
Sbjct: 3261 KSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQL 3320
Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V L S+ V ACG TV + V+ + + G +YGQLG +T+++ V +
Sbjct: 3321 VETLSSQKVGRVACGLYHTVAI--VDDGDVYSFGKNEYGQLGLS-----HTQNTKVPMLV 3373
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKD--EW 270
+ P PR A V+V CG HTV + G V TWG YG+L G +E K ++
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQF 3433
Query: 271 VP 272
VP
Sbjct: 3434 VP 3435
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 50 LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---GDKIQRDRPTI 103
LRP+ + ++++ A H +A+ G Y+WG N+RGQLGH G K+ P +
Sbjct: 425 LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLY--LPKL 482
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SE 162
+ + + K+K A H+ +V+ G FG N GQLG +++ P V+ L+
Sbjct: 483 IESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHH 542
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V+ +CG + + L ++ G + G +GQLG G + + V
Sbjct: 543 VSMVSCGL-YHMVLCTISG-EVFTCGKNDHGQLGLGHNKQVKVPTQVV------------ 588
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L E + VACG H A+ S G Y++G YG+LG + + +P + +
Sbjct: 589 ---LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTR 645
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPL 325
++ + G ++ + GQ++++G+ L N G+ D + P PL
Sbjct: 646 MVHA----ACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPL 690
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V V G YT+G N+ GQLG + P +V L + + G H V+ T
Sbjct: 500 HSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTIS 559
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G G N HGQLG G + P+ V V ACG ++S + G
Sbjct: 560 GEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNELVCFVACGYYHATAITST--GLTYSFG 617
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG G+ N P A+ + +V ACG HT+ + G
Sbjct: 618 RNDYGQLGIGSKIHQNI--------------PIALTISSNTRMVHAACGCYHTLLMSDSG 663
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
V+ +G G+LG+R D +P + V N+
Sbjct: 664 QVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNM 698
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 27/333 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y+ G+N G+LG GD I+R + T V I++ +G ++T DG L G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407
Query: 137 NKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQ 194
NK GQ G G+ + P++ L S ++ L ++ + + G GQ
Sbjct: 408 NKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQ 467
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGH ++ KL P+ I ++ + + A +H+ V G +YT+G
Sbjct: 468 LGH--------ENVGTKLYL-----PKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G+LG + + P+ V ++V +++S G + G+++ GK +
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKALLGHHV----SMVSCGLYHMVLCTISGEVFTCGKNDH 570
Query: 315 N----GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYG 368
G + P + L C + +H S+ + S+G YG+LG G
Sbjct: 571 GQLGLGHNKQVKVPTQVVLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIG--S 628
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ +P + I ++ ACG H+L++ D
Sbjct: 629 KIHQNIPIALTISSNTRMVHAACGCYHTLLMSD 661
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 62/335 (18%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGA--GRSHTVVVTE 127
V + +G +T G N+ GQ G G+ +R P+ + LS I A G H + ++
Sbjct: 3179 VVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISH 3238
Query: 128 DGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
DG ++G+N GQLG G+ + P + L + T + +L
Sbjct: 3239 DGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLT 3298
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G+ GQLG +T P+ + L+ + + +VACG HTVA+
Sbjct: 3299 FGMNDSGQLGLDHTQHQHT--------------PQLVETLSSQKVGRVACGLYHTVAIVD 3344
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-VISAGSVNSSCTAGGGQ 305
G VY++G YG+LG ++ VP V + PP +VN + G
Sbjct: 3345 DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKI-------PPAPRTPMLDAVNKAVQVYCGY 3397
Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
+ + ++ G + ++WG YG+LG G
Sbjct: 3398 YH------------------------TVTILECGKV----------VTWGRNDYGQLGIG 3423
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
KS A + V + V +CG H+L+++
Sbjct: 3424 SKEHKSIA--QFVPLPLTSRVKRASCGCYHTLLLL 3456
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 19 GGELLFCGSTCWDAVG---RRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDV 75
GE+ CG +G ++ + +V P L + FVA G H A+
Sbjct: 559 SGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNEL-------VCFVACGYY--HATAITS 609
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G Y++GRN+ GQLG G KI ++ P ++ S ++ A G HT+++++ G FG
Sbjct: 610 TGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669
Query: 136 WNKHGQLGSGSIRNEIEPSPVR 157
N GQLG+ + + P P++
Sbjct: 670 RNNKGQLGNRGNTDSLLPVPLK 691
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P P++ + V C H V + G+ TWGRN+ GQLG G K + V
Sbjct: 3375 IPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFV 3434
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
++K+A G HT+++ +G + FG N GQLG S
Sbjct: 3435 PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 161/334 (48%), Gaps = 42/334 (12%)
Query: 64 GCVSCHCVA---VDVEG---RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
G S HC A + V G + Y+WG + G+LG GD P + L+ ++
Sbjct: 63 GATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVAC 122
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
G +HT+V T +G AFG N++GQ G GSI++ +EP V L EV A ACGA+ ++ +
Sbjct: 123 GDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCV 182
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAIAALAGETIVKV 234
+S EG + G +YG +G G E+Q R P L G + +V
Sbjct: 183 TS-EG-EVYCWGWGRYGNIGDG----------------ESQDRHLPTLAKGLEGVKVAQV 224
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CG H++AVD G +YTWG+G Y +L ++KD +VP+RV+ Q+ A ++ G
Sbjct: 225 NCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQ------VATVAGGW 278
Query: 295 VNSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
++ G+L+ W K G +D + + + L+G + + SG H V
Sbjct: 279 RHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTH 338
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
SWG G+LG+ G + S P ++ L
Sbjct: 339 TGKFFSWGRNVNGQLGHS--GMQDSNSPVELAAL 370
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 35/329 (10%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT-EDGNSLAFGWNKH 139
+WGR E GQLGHGD R P V L G +++ V D ++GW
Sbjct: 33 SWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDF 92
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG+G +++ P P+ L V + ACG T+ +++ EG + G Q GQ G G
Sbjct: 93 GRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL-VATAEG-QLFAFGRNQNGQCGLG 150
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
S++ E P+ + AL G+ +V VACG H++ V S+G VY WG+G Y
Sbjct: 151 ----------SIQDCLE----PQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRY 196
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------KL 312
G +G E +D +P + V A ++ G +S GG +Y WG +
Sbjct: 197 GNIGDGESQDRHLPTLAKGLEGVKV----AQVNCGWRHSIAVDEGGAMYTWGWGAYAQLM 252
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQK 370
+ + D PK + + +G H + ADS + G ++G+ G G +
Sbjct: 253 QGDRKDHYVPKRVEAV---QQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGH--NE 307
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
++V+ L G V+ V G+ H++ +
Sbjct: 308 DVVRVQQVEALAGERVVQVKSGWKHTMAV 336
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 19/241 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P + L G ++ VA C + H + V EG Y WG G +G G+ R PT
Sbjct: 154 DCLEPQLVTALQGKEV--VAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPT 211
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ L K+ + G H++ V E G +GW + QL G ++ P V V +
Sbjct: 212 LAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-VQQ 270
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G T +++ + +G ++GQ G G + + R +
Sbjct: 271 VATVAGGWRHT--MAADSQGRLFASGWNKFGQCGVGHNEDVV--------------RVQQ 314
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ ALAGE +V+V G HT+AV G ++WG G+LGH +D P + R
Sbjct: 315 VEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAALSRGG 374
Query: 283 V 283
+
Sbjct: 375 I 375
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 231 IVKVACGTNHTVAVDSK---GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
++ +ACG++H++A+ S V +WG G G+LGH + +D P+ V
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATS-- 66
Query: 288 AVISAGSVNSSCTAGGG-QLYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGN 340
+ G+ S AGG Q+Y WG GD D P PL L+G + + G+
Sbjct: 67 --VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGD 124
Query: 341 MHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H V A+ ++G Q G+ G G + P+ V L+G V++VACG HS+ +
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSI--QDCLEPQLVTALQGKEVVAVACGAEHSMCV 182
Query: 400 VDRTNV 405
V
Sbjct: 183 TSEGEV 188
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ PT L + V I+ +A HC+A+ + Y+WG + G+LGHG+++ + P
Sbjct: 3942 SVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPK 4001
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ L Y+I G +H+ +T G +G ++G+LG G ++++P + LV
Sbjct: 4002 LIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGY 4061
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG+ L + ++ + G YG+LG G + P+
Sbjct: 4062 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PK 4107
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG ++KV CG+ +VA+ G VYTWG G Y RLGH + P++V Q
Sbjct: 4108 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGK 4167
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ I+ GS++ + G+++ WG
Sbjct: 4168 KIIS----IATGSLHCVACSDEGEVFTWG 4192
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ ++G+ ++WG E G+LGHG+++ D+P ++ L KI+ G SH+ +T
Sbjct: 2992 HAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS 3051
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G ++G+LG G +++P ++ LV + ACG+ L+ + + +
Sbjct: 3052 GELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSW 3111
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +G+LG G N P I L +V++ CG ++A+
Sbjct: 3112 GDGDFGKLGRGGSEGCNI--------------PHNIERLNALEVVQIECGAQFSLALTKT 3157
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+TWG G Y RLGH + P ++ + V+ ++ G+++ GQ+Y
Sbjct: 3158 GEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIH----VAVGALHCLAVTDTGQVY 3213
Query: 308 MWG 310
WG
Sbjct: 3214 AWG 3216
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG G P + LS+Y IKK +G H + +T DG
Sbjct: 2942 VSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGK 3001
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ N +P + L S ++ ACG+ + ++S + GL
Sbjct: 3002 VFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS--SGELYTWGL 3059
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG DN Q +P+ I +L G IV+VACG+ T+A+ +
Sbjct: 3060 GEYGRLGHG-DN-------------ITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDE 3105
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQL 306
G+V++WG G +G+LG + +P + +R N L E V I G+ S G++
Sbjct: 3106 GWVFSWGDGDFGKLGRGGSEGCNIPHNI---ERLNAL--EVVQIECGAQFSLALTKTGEV 3160
Query: 307 YMWGK----LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
+ WGK +G D KP + L + + G +H D+ +WG +
Sbjct: 3161 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3220
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ G G + P V LE +H+ VACG HS+
Sbjct: 3221 GQQGNG--TTIVNRKPALVHGLEDVHINRVACGSSHSI 3256
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 164/378 (43%), Gaps = 34/378 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + + P+ ++ + + A G + LS+ + + G G
Sbjct: 3930 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA--DNDVYSWGEGDDG 3987
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG +LA E P+ I AL G I+ +ACG H+ A+ S G +YTW
Sbjct: 3988 KLGHGN-----------RLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 4033
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ ++ V+ + +G + C ++ W
Sbjct: 4034 GKGRYGRLGHGDSEDQLKPKLIEELVGYKVI--DVACGSGDAQTLCITDDDNVWSWGDGD 4091
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
GKL G D PK + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 4150
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEE 426
+ PKKV L+G +IS+A G H + D GE D +G+
Sbjct: 4151 -TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQLGDDTTNA 4206
Query: 427 IDRNSTVPPKKGAAKVSN 444
I R V +G K++N
Sbjct: 4207 IQRPRLVSALQG-KKITN 4223
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 19/269 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ +AA H +A+ + Y+WG + G+LGHGD ++ PT++
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I G +++ ++ +G +G +G+LG G+ + + P+ + L E +
Sbjct: 564 LKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIK 623
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + PR I
Sbjct: 624 VACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG--------------GSDGSKLPRLIEK 669
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L IV+V CG +VA+ G+VYTWG G +LGH +++ P V+V + V+
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+S G + G++Y WGK +N
Sbjct: 730 ----VSLGVSHVLALTDQGEVYGWGKNEN 754
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
NL P + L IR +A G S H A+ G YTWG E G+LGHGD I + +P
Sbjct: 3020 NLDKPKMIEALRSKKIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK 3077
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
++ L ++I + G + T+ +T++G ++G G+LG G +I + IE
Sbjct: 3078 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--- 3134
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
R EV CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3135 -RLNALEVVQIECGAQFSLALT--KTGEVWTWGKGDYFRLGHGSDQHVR----------- 3180
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+P I +L + ++ VA G H +AV G VY WG +G+ G+
Sbjct: 3181 ---KPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3225
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 40/343 (11%)
Query: 78 RCYTWGRNERGQLG--HGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
R + WG N++ QLG G K++ + +S+L + I AG +S +V+ +G A
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL--WPIHIAGGSKS-LFIVSHEGKLYAC 2951
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G N P P+ L V + A G + L +++G + + G +
Sbjct: 2952 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL-TLDG-KVFSWGEGE 3009
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG N N +P+ I AL + I +ACG++H+ A+ S G +Y
Sbjct: 3010 DGKLGHG--NRLNLD------------KPKMIEALRSKKIRDIACGSSHSAAITSSGELY 3055
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
TWG G YGRLGH + + P+ + + ++ ++ GS ++ A G ++ W
Sbjct: 3056 TWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQ----VACGSRDAQTLALTDEGWVFSW 3111
Query: 310 -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
GKL G + P + L+ + ++ G + + +WG Y L
Sbjct: 3112 GDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 3171
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G + P ++ L+ VI VA G H L + D V
Sbjct: 3172 GHG--SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 151/341 (44%), Gaps = 38/341 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ D
Sbjct: 3916 FAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD 3975
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
+ ++G G+LG G+ P + L E+ ACG + ++S +
Sbjct: 3976 NDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITST--GQLYTW 4033
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ I L G ++ VACG+ T+ +
Sbjct: 4034 GKGRYGRLGHG--------DS------EDQLKPKLIEELVGYKVIDVACGSGDAQTLCIT 4079
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP++++ V+ E GS S G
Sbjct: 4080 DDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVEC----GSQFSVALTRSGS 4135
Query: 306 LYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK + G+ PK + L G + + +G++H +D +WG
Sbjct: 4136 VYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDND 4195
Query: 359 YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG ++A+ P+ V L+G + +VACG H+L
Sbjct: 4196 EGQLG----DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 220 PRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + L+G ++K+A H +A+ VY+WG G GRLGH + + P +
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSG 330
+ +++ E G S+ + G LY WG+ N G +D + P + LS
Sbjct: 564 LKGKDIIDVEC----GGTYSAAISANGALYTWGR-GNYGRLGHGTAEDCLTPTMISALSD 618
Query: 331 WNLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
++ + G+ + A + CI SWG YG+LG G G S +P+ ++ L+
Sbjct: 619 EHIIKVACGSFY----AHTLCITSQGKVYSWGDGDYGKLGRG--GSDGSKLPRLIEKLQN 672
Query: 384 MHVISVACGYGHSLVI 399
+ ++ V CG S+ +
Sbjct: 673 VKIVQVYCGAQFSVAL 688
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++PT + L I VA G H + + +G+ Y+WG + G+LG G P ++
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLI 667
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
+L KI + G +V ++EDG+ +G + +LG + N P V L +V
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKV 727
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ G + L+ Q G G + DSS + PR I
Sbjct: 728 VGVSLGVSHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQ----PRLI 771
Query: 224 AALAGETIVKVACGTNHTVA 243
AL G+ +V V CG + A
Sbjct: 772 EALKGQKVVGVCCGPAQSFA 791
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V C + +A+ G +TWG+ + +LGHG +PT++ L K+
Sbjct: 3139 LEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAV 3198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
G H + VT+ G A+G N HGQ G+G+ +P+ V L + ACG+ ++
Sbjct: 3199 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSI 3256
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ PT + L + VA G + HC+AV G+ Y WG N+ GQ G+G I +
Sbjct: 3176 DQHVRKPTVIESLKDKKVIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRK 3233
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
P +V L I + G SH++ T
Sbjct: 3234 PALVHGLEDVHINRVACGSSHSIAWT 3259
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ PT L + V I+ +A HC+A+ + Y+WG + G+LGHG+++ + P
Sbjct: 3103 SVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPK 3162
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ L Y+I G +H+ +T G +G ++G+LG G ++++P + LV
Sbjct: 3163 LIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGY 3222
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG+ L + ++ + G YG+LG G + P+
Sbjct: 3223 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PK 3268
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG ++KV CG+ +VA+ G VYTWG G Y RLGH + P++V Q
Sbjct: 3269 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGK 3328
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ I+ GS++ + G+++ WG
Sbjct: 3329 KIIS----IATGSLHCVACSDEGEVFTWG 3353
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ ++G+ ++WG E G+LGHG+++ D+P ++ L KI+ G SH+ +T
Sbjct: 2153 HAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS 2212
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G ++G+LG G +++P ++ LV + ACG+ L+ + + +
Sbjct: 2213 GELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSW 2272
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +G+LG G N P I L +V++ CG ++A+
Sbjct: 2273 GDGDFGKLGRGGSEGCNI--------------PHNIERLNALEVVQIECGAQFSLALTKT 2318
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+TWG G Y RLGH + P ++ + V+ ++ G+++ GQ+Y
Sbjct: 2319 GEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIH----VAVGALHCLAVTDTGQVY 2374
Query: 308 MWG 310
WG
Sbjct: 2375 AWG 2377
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG G P + LS+Y IKK +G H + +T DG
Sbjct: 2103 VSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGK 2162
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ N +P + L S ++ ACG+ + ++S + GL
Sbjct: 2163 VFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS--SGELYTWGL 2220
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG DN Q +P+ I +L G IV+VACG+ T+A+ +
Sbjct: 2221 GEYGRLGHG-DN-------------ITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDE 2266
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQL 306
G+V++WG G +G+LG + +P + +R N L E V I G+ S G++
Sbjct: 2267 GWVFSWGDGDFGKLGRGGSEGCNIPHNI---ERLNAL--EVVQIECGAQFSLALTKTGEV 2321
Query: 307 YMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
+ WGK +G D KP + L + + G +H D+ +WG +
Sbjct: 2322 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 2381
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ G G + P V LE +H+ VACG HS+
Sbjct: 2382 GQQGNG--TTIVNRKPALVHGLEDVHINRVACGSSHSI 2417
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 164/378 (43%), Gaps = 34/378 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + + P+ ++ + + A G + LS+ + + G G
Sbjct: 3091 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA--DNDVYSWGEGDDG 3148
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG +LA E P+ I AL G I+ +ACG H+ A+ S G +YTW
Sbjct: 3149 KLGHGN-----------RLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 3194
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ ++ V+ + +G + C ++ W
Sbjct: 3195 GKGRYGRLGHGDSEDQLKPKLIEELVGYKVI--DVACGSGDAQTLCITDDDNVWSWGDGD 3252
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
GKL G D PK + L+G + ++ G+ S S +WG Y LG+G
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 3311
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEE 426
+ PKKV L+G +IS+A G H + D GE D +G+
Sbjct: 3312 -TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQLGDDTTNA 3367
Query: 427 IDRNSTVPPKKGAAKVSN 444
I R V +G K++N
Sbjct: 3368 IQRPRLVSALQG-KKITN 3384
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
NL P + L IR +A G S H A+ G YTWG E G+LGHGD I + +P
Sbjct: 2181 NLDKPKMIEALRSKKIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK 2238
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
++ L ++I + G + T+ +T++G ++G G+LG G +I + IE
Sbjct: 2239 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--- 2295
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
R EV CGA F++ L+ + + G Y +LGHG+D
Sbjct: 2296 -RLNALEVVQIECGAQFSLALT--KTGEVWTWGKGDYFRLGHGSDQHVR----------- 2341
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+P I +L + ++ VA G H +AV G VY WG +G+ G+
Sbjct: 2342 ---KPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2386
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 40/339 (11%)
Query: 78 RCYTWGRNERGQLG--HGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
R + WG N++ QLG G K++ + +S+L + I AG +S +V+ +G A
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL--WPIHIAGGSKS-LFIVSHEGKLYAC 2112
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G N P P+ L V + A G + L +++G + + G +
Sbjct: 2113 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL-TLDG-KVFSWGEGE 2170
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG N N +P+ I AL + I +ACG++H+ A+ S G +Y
Sbjct: 2171 DGKLGHG--NRLNLD------------KPKMIEALRSKKIRDIACGSSHSAAITSSGELY 2216
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
TWG G YGRLGH + + P+ + + ++ ++ GS ++ A G ++ W
Sbjct: 2217 TWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQ----VACGSRDAQTLALTDEGWVFSW 2272
Query: 310 -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
GKL G + P + L+ + ++ G + + +WG Y L
Sbjct: 2273 GDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 2332
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+G + P ++ L+ VI VA G H L + D
Sbjct: 2333 GHG--SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 2369
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 38/340 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ D
Sbjct: 3078 AVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3137
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
+ ++G G+LG G+ P + L E+ ACG + ++S + G
Sbjct: 3138 DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITST--GQLYTWG 3195
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGHG DS E Q +P+ I L G ++ VACG+ T+ +
Sbjct: 3196 KGRYGRLGHG--------DS------EDQLKPKLIEELVGYKVIDVACGSGDAQTLCITD 3241
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP++++ V+ E GS S G +
Sbjct: 3242 DDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVEC----GSQFSVALTRSGSV 3297
Query: 307 YMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
Y WGK + G+ PK + L G + + +G++H +D +WG
Sbjct: 3298 YTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDE 3357
Query: 360 GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
G+LG ++A+ P+ V L+G + +VACG H+L
Sbjct: 3358 GQLG----DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ V C + +A+ G +TWG+ + +LGHG +PT++ L K+
Sbjct: 2300 LEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAV 2359
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
G H + VT+ G A+G N HGQ G+G+ +P+ V L + ACG+ ++
Sbjct: 2360 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSI 2417
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ PT + L + VA G + HC+AV G+ Y WG N+ GQ G+G I +
Sbjct: 2337 DQHVRKPTVIESLKDKKVIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRK 2394
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
P +V L I + G SH++ T
Sbjct: 2395 PALVHGLEDVHINRVACGSSHSIAWT 2420
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I +AAG V+ H +AV WG N GQLG G R+ P V + I A
Sbjct: 95 ITAIAAG-VNGHSLAVTSASTMLAWGFNTWGQLGDGTTTNRNTPVAVDLPTGTTITAIAA 153
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
G+SH++ VT G LA+G N GQLG G+ N P V + +TA A G ++ L
Sbjct: 154 GKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLAL 213
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+S ++L G +GQLG GT NT P + G TI +A
Sbjct: 214 TSA--GTMLAWGENTWGQLGDGTTTNRNT--------------PVTVDLPTGTTITALAG 257
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G H++AV S G + WGF +G+LG + P VD+ + S+
Sbjct: 258 GGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLA 317
Query: 297 SSCTAGGGQLYMWG--KLKNNGDDWMYPK--PL-MDL-SGWNLRCMDS-GNMHHFVGADS 349
++ T G + WG GD + P+ +DL +G + + + G H + A S
Sbjct: 318 ATST---GTMLAWGLNSFGQLGDGTTSNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATS 374
Query: 350 --SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ ++WG G+LG G +S+ P VD+ G + +V G HSL IV T+
Sbjct: 375 TGTMLAWGANTLGQLGDGTTSNRST--PVTVDLPAGTTITAVTAGGFHSLAIVPSTS 429
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 145/341 (42%), Gaps = 30/341 (8%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG-RSHTVVV 125
S A G WG N GQLG G R+ P V + I AG H++ V
Sbjct: 50 SVPSAAAGTPGTGLAWGFNALGQLGDGTTTNRNTPVTVDLPADTTITAIAAGVNGHSLAV 109
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
T LA+G+N GQLG G+ N P V L + T TA A + L+ ++L
Sbjct: 110 TSASTMLAWGFNTWGQLGDGTTTNRNTPVAVD-LPTGTTITAIAAGKSHSLAVTSAGTML 168
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
GL GQLG GT NT P A+ G TI +A G H++A+
Sbjct: 169 AWGLNSAGQLGDGTTTNRNT--------------PVAVDLPTGTTITAIAAGNGHSLALT 214
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
S G + WG +G+LG + P VD+ + A+ G + + T+ G
Sbjct: 215 SAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPTGTTI---TALAGGGGHSLAVTSTGTM 271
Query: 306 LY----MWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGADS--SCISWGHAQ 358
L WG+L + +DL +G + + G H + A S + ++WG
Sbjct: 272 LAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLAATSTGTMLAWGLNS 331
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVAC--GYGHSL 397
+G+LG G +S+ P VD+ G + ++A G GHSL
Sbjct: 332 FGQLGDGTTSNRST--PVTVDLPAGTTITAIAAGGGSGHSL 370
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G I +AAG + H +A+ G WG N GQLG G R+ P V + I
Sbjct: 197 GTTITAIAAG--NGHSLALTSAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPTGTTITA 254
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
G H++ VT G LA+G+N GQLG G+ N P V G
Sbjct: 255 LAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGH 314
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L++ ++L GL +GQLG GT + +T P + AG TI +
Sbjct: 315 SLAATSTGTMLAWGLNSFGQLGDGTTSNRST--------------PVTVDLPAGTTITAI 360
Query: 235 AC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
A G+ H++A S G + WG G+LG + P VD + A
Sbjct: 361 AAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTVD-------------LPA 407
Query: 293 GSVNSSCTAGG 303
G+ ++ TAGG
Sbjct: 408 GTTITAVTAGG 418
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 131/276 (47%), Gaps = 27/276 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N V P RL L G I ++ G H V EG YTWG N QLG+G P
Sbjct: 61 NSVEPRRLDTLCGKKITCLSYGS-GPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPC 119
Query: 103 -IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLV 160
I + L K+ + G H++++T DG +G+N GQ+GSGS N+ P V CL
Sbjct: 120 QISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQ 179
Query: 161 SEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ ACG + ++ VE + G GQLG G QP
Sbjct: 180 NKIAVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGNSGN--------------QPT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKDEWVPRRVDV 277
P IAAL G + +VACG HT+ + +G +Y WG YG+L G+R + VP VD
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVD- 282
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ V+ A SA + S+ G Q+YMWG+ +
Sbjct: 283 --KDRVIEIAACHSAHT--SAAKTQGSQVYMWGQCR 314
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 33/276 (11%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VTE+ A G N G LG G +N +EP + L ++T + G+ V
Sbjct: 28 GSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ EG + G Y QLG+GT N P I+ L + + +
Sbjct: 88 VVATAEG-EVYTWGHNAYSQLGNGTTNN--------------SLLPCQISTNLVNKKVTE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VYTWG+ G++G ++ +PRRV +N + I+ G
Sbjct: 133 VACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI---AVNIACG 189
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHF 344
+ S G++Y+WG L N+G+ P P + L G ++ + G H
Sbjct: 190 QMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQ---PTPCRIAALQGIRVQRVACGYAHTL 246
Query: 345 VGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
V D +WG YG+LG G +S +P VD
Sbjct: 247 VLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVD 282
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G++ + P
Sbjct: 219 GNQPTPCRIAALQGIRVQRVACG--YAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYP 276
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
++ I+ A +HT G S + W
Sbjct: 277 VPITVDKDRVIEIAACHSAHTSAAKTQG-SQVYMW 310
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ+GSGS N+ P+P R CL ++V T ACG ++ V+ + G GQL
Sbjct: 187 GQVGSGSTVNQ--PTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQL 242
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 243 GLGNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
GAG + + T + G N G LG G +++ IEP + L ++ + G+ +
Sbjct: 58 GAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHI 116
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P I+ L+ + +++
Sbjct: 117 VLATTEG-EVFTWGHNAYSQLGNGTTNH--------------GLVPCHISTNLSNKQVIE 161
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG+ H++ + S G V+ WG+ G++G ++ PRRV +N V+ I+ G
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVV---VTIACG 218
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHF 344
+ G++Y+WG L N+G+ P P + L G ++ + G H
Sbjct: 219 QMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAALQGIRVQRVACGYAHTL 275
Query: 345 VGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
V D +WG YG+LG G +S P V+
Sbjct: 276 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQ-STIEPRRLDALSGKKIACLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P IAAL G I +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-VVEKDRIVEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDA 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNHGLV------------ 141
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 142 --PCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 257 IRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE 306
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 30/298 (10%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 92 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 147
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 148 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 207
Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ+GSGS N+ P+P R CL ++V T ACG ++ V+ + G GQL
Sbjct: 208 GQVGSGSTVNQ--PTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQL 263
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 264 GLGNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 309
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 310 NSYGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
GAG + + T + G N G LG G +++ IEP + L ++ + G+ +
Sbjct: 79 GAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHI 137
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P I+ L+ + +++
Sbjct: 138 VLATTEG-EVFTWGHNAYSQLGNGTTNH--------------GLVPCHISTNLSNKQVIE 182
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG+ H++ + S G V+ WG+ G++G ++ PRRV +N V+ I+ G
Sbjct: 183 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVV---VTIACG 239
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHF 344
+ G++Y+WG L N+G+ P P + L G ++ + G H
Sbjct: 240 QMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAALQGIRVQRVACGYAHTL 296
Query: 345 VGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
V D +WG YG+LG G +S P V+
Sbjct: 297 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 332
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 19/265 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L + V I VA HC+A+ +G Y+WG E G+LGHG+++ DRP +++
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
LS ++ G +H+ +T G +G ++G+LG G +++ P V L S V
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVID 4146
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G E P I
Sbjct: 4147 VACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG--------------GSEGCKLPMRIDC 4192
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G ++KV CG+ +VA+ G VYTWG G Y RLGH + P RV Q ++
Sbjct: 4193 LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVS 4252
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ G++Y WG
Sbjct: 4253 ----IATGSLHCVACTDTGEVYTWG 4273
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 78 RCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+ + WG N++ QLG G K++ P LS + G +V+ DG A G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKV--PVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115
Query: 136 WNKHGQLGSGSIRN----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G+LG G N P LV V + G L+ + + G +
Sbjct: 3116 EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHA---LALTADGKVYSWGEGE 3172
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG ++ EA PR I +LAGE ++ +ACG+ H+ V ++G++Y
Sbjct: 3173 DGKLGHGN-----------RITLEA---PRLIESLAGERVISIACGSAHSACVTARGHLY 3218
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
TWG G YGRLGH + + VP+ V+ V+ ++ GS ++ A G+++ W
Sbjct: 3219 TWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQ----VACGSRDAQTLALTACGKVFSW 3274
Query: 310 -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
GKL G D P + L+ + ++ G + D +WG Y L
Sbjct: 3275 GDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRL 3334
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G P V+ L G VI VA G H L + V
Sbjct: 3335 GHG--CDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQV 3375
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 148/332 (44%), Gaps = 30/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT L+ + G VT DG A G+
Sbjct: 3954 YGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGAG 4013
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G I + +P+ + + +T AC + L+ + + G + G+LGHG
Sbjct: 4014 GRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHG 4073
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
Y+ RP+ I AL+G +V +ACG H+ + ++G +YTWG G Y
Sbjct: 4074 NRVSYD--------------RPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRY 4119
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLK 313
GRLGH + +D+ +P+ V+ V+ + +G + C ++ W GKL
Sbjct: 4120 GRLGHGDSEDQLIPKLVEALSSFRVI--DVACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4177
Query: 314 NNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHAQYGELGYGPYGQ 369
G + P + L G + ++ G+ F A C +WG Y LG+G Y
Sbjct: 4178 RGGSEGCKLPMRIDCLKGLRVIKVECGS--QFSVALCQCGSVYTWGKGDYHRLGHGSY-- 4233
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ P +V ++G ++S+A G H + D
Sbjct: 4234 EHVRRPMRVTGMQGKMIVSIATGSLHCVACTD 4265
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN VS P + L G+++ +A G H + GR YTWG+ G+LGHGD +
Sbjct: 4073 GNRVSYDRPKLITALSGLEVVCIACG--GAHSACLTARGRIYTWGKGRYGRLGHGDSEDQ 4130
Query: 99 DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
P +V LS +++ G+G + T+ +T+D N ++G +G+LG G P +
Sbjct: 4131 LIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRI 4190
Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
CL V CG+ F+V L + S+ G Y +LGHG+ YE
Sbjct: 4191 DCLKGLRVIKVECGSQFSVALC--QCGSVYTWGKGDYHRLGHGS--------------YE 4234
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP + + G+ IV +A G+ H VA G VYTWG G+LG PR +
Sbjct: 4235 HVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLL 4294
Query: 276 DVFQRNNV 283
Q N +
Sbjct: 4295 MALQVNII 4302
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 24/293 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+L CG + R G N VS R P L V +R VA H +A+ +G+
Sbjct: 3109 GKLFACG----EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGK 3164
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y+WG E G+LGHG++I + P ++ L+ ++ G +H+ VT G+ +G +
Sbjct: 3165 VYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGE 3224
Query: 139 HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
+G+LG G ++ P V L + V ACG+ L+ + + G +G+LG
Sbjct: 3225 YGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGR 3284
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + P + L + +V CG ++A+ G V+TWG G
Sbjct: 3285 GGSDGCAI--------------PMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGD 3330
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLGH P V+ + V+ ++ G+++ Q++ WG
Sbjct: 3331 YFRLGHGCDAHVRRPTLVEALRGRRVIH----VAVGALHCLAVTSENQVWAWG 3379
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
L +P + L G R ++ C S H V G YTWG E G+LGHGD + P
Sbjct: 3183 TLEAPRLIESLAGE--RVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPK 3240
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L+ Y++ + G + T+ +T G ++G G+LG G P V L
Sbjct: 3241 MVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLN 3300
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S VT CGA F++ L+ + G Y +LGHG D R
Sbjct: 3301 SLGVTQVECGAQFSLALT--RDGEVWTWGKGDYFRLGHGCDAHVR--------------R 3344
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P + AL G ++ VA G H +AV S+ V+ WG +G+ G+
Sbjct: 3345 PTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGN 3388
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 66 VSCHCVAVDVEGR-----CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VSCH + R ++WG E G+LGHGD RD P + L+ +++ + AG +
Sbjct: 528 VSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLA 587
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
+ V+T G +G G+LG G+I N + P PV A V L E
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-----SFNAHNIERIIDVALGWGE 642
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAALAGETIVKVACGTN 239
G+++ T + +V++ E + PRA++ALA + +V G +
Sbjct: 643 GSTLC------------------CTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYTGEH 684
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
A+ G VYTWG G RLGH + +P+ V+ Q ++ +S G+ +
Sbjct: 685 WHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVD----LSLGASHGIA 740
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPL 325
+ G L++WG + P+P+
Sbjct: 741 LSSEGVLFVWGTHERTQISNPVPQPV 766
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 137/306 (44%), Gaps = 32/306 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G +PT+++ + I K +G H + ++ DG
Sbjct: 3998 AVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADG 4057
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ + P + L EV ACG + L++ I G
Sbjct: 4058 EVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTA--RGRIYTWG 4115
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGHG DS E Q P+ + AL+ ++ VACG+ T+ +
Sbjct: 4116 KGRYGRLGHG--------DS------EDQLIPKLVEALSSFRVIDVACGSGDAQTLCITD 4161
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG + +P R+D + V+ + GS S G +
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIK----VECGSQFSVALCQCGSV 4217
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
Y WGK L + + + P + + G + + +G++H D+ +WG
Sbjct: 4218 YTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDE 4277
Query: 360 GELGYG 365
G+LG G
Sbjct: 4278 GQLGDG 4283
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 33/295 (11%)
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+L +I++ +++T DG ++ ++ + P +++V+
Sbjct: 479 QLGSIRIQQIACAEKLALLLTHDGAVYTLPYD--------TMTPHLVPGLESKTITQVSC 530
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+ G + + SS GA + G+ + G+LGHG D++ + A P+ +
Sbjct: 531 HSLGRHY-LCRSSCGGA--WSWGIGEDGRLGHG--------DTAARDA------PQPLHH 573
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LA +V+VA G + + S+G +YTWG G GRLGH ++ P+ V N
Sbjct: 574 LAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERI 633
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
+ + G ++ C G + ++G+ + P+ L L+ + + + +G H
Sbjct: 634 IDVALGWGEGSTLCCTWEGAVQVFGEGEAG-----TPRALSALAMFRVTRVYTGEHWHAA 688
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D + +WG LG+G +S+ +PK V+ L+G+ ++ ++ G H + +
Sbjct: 689 LTDGGQVYTWGKGDGYRLGHG--NMESTKIPKLVEALQGIKIVDLSLGASHGIAL 741
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
+A+ +G +TWG+ + +LGHG RPT+V L ++ G H + VT +
Sbjct: 3315 LALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQ 3374
Query: 131 SLAFGWNKHGQLGSGS 146
A+G N HGQ G+G+
Sbjct: 3375 VWAWGDNDHGQQGNGT 3390
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ YTWG+ + +LGHG+ P +V L KI G SH + ++ +G + F W
Sbjct: 693 GQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEG--VLFVW 750
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT-VWLSSVEGASILNAGLPQYGQL 195
H + I N + P PV+ A + T ++ S E L + LP L
Sbjct: 751 GTHER---TQISNPV-PQPVKAFNPSFKANGVSSGPTQIFAWSEENPRDLPSSLPFVIDL 806
Query: 196 GHGTDNEYNTKDSSVKLAYE 215
+DN + + +++ E
Sbjct: 807 ---SDNTFKALERLLRIVVE 823
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
R+ ++G ++ V C + H +A+ +G Y WG N GQLG G + +P +S L
Sbjct: 129 RMIKVLGTNV-IVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTL 187
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
+ I G HT+V+++ G ++G N GQLG ++ P +R L ++V
Sbjct: 188 AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYA 247
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
CG +F+V+L+ G AG+ YGQLGHG NT + + PR + L
Sbjct: 248 TCGEEFSVFLTMDGGVFTCGAGM--YGQLGHG-----NTTNEIL---------PRQVMEL 291
Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G T+ +++CG HT+A V S+G VY WG GG G+LG+R + P+ V
Sbjct: 292 MGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 159/351 (45%), Gaps = 33/351 (9%)
Query: 23 LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+FC GST +G G D N+ P + + ++ +A G + VA+ EG+ Y+
Sbjct: 1 MFCWGSTIHGELGL-GGIEDENIFMPREVDFIEASNVEQIACG--ENYTVAITKEGKVYS 57
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G N+ GQLGH R R ++ L + +K G HT+ V E G ++G N +GQ
Sbjct: 58 CGNNDYGQLGHEKA--RKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115
Query: 142 LGSGSIR-NEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG S+ E P ++ L + + ACG + ++ L++ + G + GQLG G+
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN--DGELYAWGSNREGQLGLGS 173
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
Y T + +P+ I+ LA I +ACG HT+ + G V++WG +G
Sbjct: 174 ---YTT----------TEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFG 220
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
+LG + + +P ++ + V E + T G G M+G+L +
Sbjct: 221 QLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAG---MYGQLGHG 277
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELG 363
N + + P+ +M+L G + + G H S +WG G+LG
Sbjct: 278 NTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 38/334 (11%)
Query: 80 YTWGRNERGQLGHG----DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+ WG G+LG G + I R E S +++ G ++TV +T++G + G
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPREVDFIEASN--VEQIACGENYTVAITKEGKVYSCG 59
Query: 136 WNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N +GQLG R ++ P + V ACG T L+ E + + G GQ
Sbjct: 60 NNDYGQLGHEKARKRLQLIPGLDAFVFR--KIACGNCHT--LAVNEWGQLFSWGCNMNGQ 115
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG N+ D + ++ PR I L IV++ACGT H++A+ + G +Y WG
Sbjct: 116 LG------LNSVDCTERV-------PRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWG 162
Query: 255 FGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G+LG E P+R+ P A I+ G ++ + G ++ WG+
Sbjct: 163 SNREGQLGLGSYTTTEIKPKRISTLAA----VPIAFIACGGYHTIVISKSGAVFSWGRNT 218
Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGP 366
N+ P L L + G F+ D + G YG+LG+G
Sbjct: 219 FGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHG- 277
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P++V L G V ++CG H+L +V
Sbjct: 278 -NTTNEILPRQVMELMGSTVTQISCGKRHTLALV 310
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 54/369 (14%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G +WG N G LGH I++ P + LS ++K AG H++ +TE+G +FG
Sbjct: 567 GLILSWGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGL 626
Query: 137 NKHGQLG--------SGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASIL 185
N GQ G S + P P+ L + + + L + +G +
Sbjct: 627 NDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADG-ELY 685
Query: 186 NAGLPQYGQLGHGT-------DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G QLGH T N + + +S + +Y QP+P ++AL G+ + +VACG
Sbjct: 686 TFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSY-FQPKPTRLSALNGQVVKQVACGR 744
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ V +G +YTWG G G+LGH + D+ P+RV+ ++ ++ ++ G +S+
Sbjct: 745 FHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIM---VKVACGENHSA 801
Query: 299 CTAGGGQLYMWGKLKN----NGDDWM------------------YPKPLMDLSGWNLRCM 336
G +Y G ++ GD+W+ P L LS +++ +
Sbjct: 802 AVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFV 861
Query: 337 DSGNMHHFVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
D H F A ++ +WG LG GP G S P + ++G V+SVACG
Sbjct: 862 DIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSE--PTHLSSIDG--VVSVACGD 915
Query: 394 GHSLVIVDR 402
H+ + D+
Sbjct: 916 IHAAALTDK 924
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 171/435 (39%), Gaps = 90/435 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG----------DKI 96
P + L V ++ VAAG H + + G ++G N++GQ G +
Sbjct: 591 PLAIESLSSVQVKMVAAG--EFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAV 648
Query: 97 QRDRPTIV-SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR------- 148
R RP ++ +L K + AG H+ +VT DG FG QLG ++
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708
Query: 149 -----------NEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+ +P P R V ACG F + EGA + G GQ
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACG-RFHSACVTEEGA-LYTWGRGANGQ 766
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + +A P+ R A + + +VKVACG NH+ AVDS G +YT G
Sbjct: 767 LGHG------------DMTDQATPK-RVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTG 813
Query: 255 FGGYGRLGHREQKDEWV---------------PRRVDVFQRNNVLPPEAV----ISAGSV 295
G+LG + DEW+ R+ F ++L V I+ G
Sbjct: 814 GDESGQLG---KGDEWICATHGEGCTGSGWSCQERIPTFL--SILSVRHVQFVDIACGHG 868
Query: 296 NSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS- 349
+ G LY WGK L +GD P L + G + + G++H D
Sbjct: 869 FCAAITNRGLLYTWGKGTALGLGPSGDV-SEPTHLSSIDG--VVSVACGDIHAAALTDKG 925
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH---VISVACGYGHSLVIVDRTN-- 404
WG ++ G LG G + + PK V +H + V+ G H+L I ++
Sbjct: 926 QLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCLGVSIGPRHALAISSTSSSL 985
Query: 405 ---VGERLDQLDVYD 416
+G LD D D
Sbjct: 986 PKTIGAALDSPDFAD 1000
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 130/308 (42%), Gaps = 48/308 (15%)
Query: 37 KGALDGNLVSPTRLRPLVGVD------IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
K A +L + R RP+V D + +AAG H V +G YT+GR QL
Sbjct: 638 KIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAG--GYHSALVTADGELYTFGRGGEFQL 695
Query: 91 GH---------GDKIQ-----------RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
GH G+ + + +PT +S L+ +K+ GR H+ VTE+G
Sbjct: 696 GHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGA 755
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
+G +GQLG G + ++ P V + + + ACG + + + S I G
Sbjct: 756 LYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDS--AGVIYTTG 813
Query: 189 LPQYGQLGHGTDNEYNTKDSSVK----LAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ GQLG G + T E P +I ++ V +ACG A+
Sbjct: 814 GDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAI 873
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSCTAG 302
++G +YTWG G LG DV + ++ + V+S G ++++
Sbjct: 874 TNRGLLYTWGKGTALGLGPSG----------DVSEPTHLSSIDGVVSVACGDIHAAALTD 923
Query: 303 GGQLYMWG 310
GQLYMWG
Sbjct: 924 KGQLYMWG 931
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL S+V ACG + ++ V + G GQLG
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCS--MAVVNTGEVFVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE +++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N A
Sbjct: 71 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTN--------------AG 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
++ V+ I+ G + S G++++W G+N
Sbjct: 176 GCLQSKVV---VNIACGQMCSMAVVNTGEVFVW--------------------GYN---- 208
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 209 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 245
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 246 LVLTDEGQV 254
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 120/260 (46%), Gaps = 22/260 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ F A + HC AV G YTWG+ GQLGHGD + + P V + K ++K A
Sbjct: 273 VVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSA 331
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTV 174
G HTV VT G +G K G+LG + P+ V + V A G T+
Sbjct: 332 GFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTL 391
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + + G G+LGHG DN+ Q P ++AL E V +
Sbjct: 392 VLN--RRGQVFSFGSGDSGRLGHGNDND--------------QWSPTFLSALESERCVSI 435
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G H+VA+ +G +YTWG G GRLGH DE +PR++ + + + ++AG
Sbjct: 436 AAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTI--KAIAVAAGE 493
Query: 295 VNSSCTAGGGQLYMWGKLKN 314
++ G L G++ +
Sbjct: 494 AHTCIFRSEGSLITLGRVSH 513
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
+S L + G H VT+ G +G ++GQLG G ++I P PV + EV
Sbjct: 267 LSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEV 326
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ + G TV ++ ++ G + G+LGH D++ +L P +
Sbjct: 327 KSVSAGFYHTVAVT--HHGALFTWGDGKEGKLGH--------NDNAQRLI------PTLV 370
Query: 224 AALA--GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
AA G + G +HT+ ++ +G V+++G G GRLGH D+W P + +
Sbjct: 371 AAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESE 430
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRC 335
+ I+AG +S GQ+Y W G+L + D D + P+ L +S ++
Sbjct: 431 RCVS----IAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKA 486
Query: 336 M--DSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
+ +G H + ++ S I+ G +G + G Q D+L+ +H
Sbjct: 487 IAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQ---------DMLDTLH 530
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
++ G H AV G VYTWG G YG+LGH + D+ +P+ V + +SAG
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE-----VKSVSAG 332
Query: 294 SVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL--RCMDSGNMHHFV 345
++ G L+ WG K N+ + P + W + +G H V
Sbjct: 333 FYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLV 392
Query: 346 -GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
S+G G LG+G + S P + LE +S+A G+ HS+ + D+
Sbjct: 393 LNRRGQVFSFGSGDSGRLGHGNDNDQWS--PTFLSALESERCVSIAAGFAHSVALTDQGQ 450
Query: 405 V 405
+
Sbjct: 451 I 451
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + + + AA H + ++ G+ +++G + G+LGHG+ + PT +S
Sbjct: 367 PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSA 426
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-- 164
L + AG +H+V +T+ G +G K G+LG GS +E+ P + L+S T
Sbjct: 427 LESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKL-ALISHDTIK 485
Query: 165 --ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
A A G T S EG S++ G +G++ G+
Sbjct: 486 AIAVAAGEAHTCIFRS-EG-SLITLGRVSHGRMAEGS 520
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 51/305 (16%)
Query: 34 GRRKGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
G+ KG + G N+ P R+ L+G I+ ++ C H AV +G YTWG E
Sbjct: 107 GKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQIS--CGQFHMAAVTEDGEVYTWGNKE 164
Query: 87 RGQLGHGDKIQRDR-------------------PTIVSELSKYKIKKAGAGRSHTVVVTE 127
G+LGH +++++++ P + L K K+ G TVV++E
Sbjct: 165 FGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE 224
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG FG+N++G LG S +N + + ++++ + G F ++ + +
Sbjct: 225 DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAIT--KQGKLYTW 282
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDS 246
G + GQLG+ + + Y TK P + + +IV V+CG N A+
Sbjct: 283 GNNRNGQLGN-SQSLYQTK-------------PSIVTGFGSQNSIVDVSCGDNFIAALTQ 328
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
+G +YTWGFGG G+LGH + D + PR V+ Q+ ++ I+ G +++ QL
Sbjct: 329 QGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQK--IIK----IACGGSHAAFITEDNQL 382
Query: 307 YMWGK 311
Y +G+
Sbjct: 383 YQFGR 387
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 164/389 (42%), Gaps = 52/389 (13%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD- 99
+ N +PT + L I+ V AG +A+ G Y+WG+N+ G LGH D++ +
Sbjct: 67 ENNYYTPTEIEVLTDKKIKKVEAG--KSISMALTHNGEVYSWGKNKGGILGHEDRLSFNM 124
Query: 100 -RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-------------- 144
+P + +L KIK+ G+ H VTEDG +G + G+LG
Sbjct: 125 TQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKR 184
Query: 145 -----GSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
+++ + P + L + + ACG FTV LS E + G QYG LG+
Sbjct: 185 GNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS--EDGKVYTFGYNQYGSLGYV 242
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+D T P+ I L IVK++ G + A+ +G +YTWG
Sbjct: 243 SDQNSVT-------------TPQLIKDL--NDIVKISAGYSFCAAITKQGKLYTWGNNRN 287
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLK 313
G+LG+ + + P V F N + +S G + GQLY WG +L
Sbjct: 288 GQLGNSQSLYQTKPSIVTGFGSQNSIVD---VSCGDNFIAALTQQGQLYTWGFGGDGQLG 344
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
+ +Y ++ ++ G+ F+ D+ +G G+LG G ++
Sbjct: 345 HGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEAS 404
Query: 374 M---PKKVDILEGMHVISVACGYGHSLVI 399
+ P V +G V+ V CG H++ I
Sbjct: 405 IRSTPNLVQYFKGKQVVDVTCGGEHTIAI 433
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 163/369 (44%), Gaps = 30/369 (8%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDV-EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
+ ++G + A G + +A + E Y+WG GQLG ++ PT + L+
Sbjct: 22 KAILGAGVCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTD 81
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLV-SEVTAT 166
KIKK AG+S ++ +T +G ++G NK G LG N +P + L+ ++
Sbjct: 82 KKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQI 141
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD--NEYNTKDSSVKLAYEA---QPRPR 221
+CG ++ E + G ++G+LGH + E K L+++ P+
Sbjct: 142 SCGQFHMAAVT--EDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
I +L +VACG TV + G VYT+G+ YG LG+ +Q P+ +
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIK--DL 257
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP-LMDLSGWNLRC 335
N+++ ISAG + G+LY WG +N N KP ++ G
Sbjct: 258 NDIVK----ISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSI 313
Query: 336 MDSGNMHHFVGA---DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+D +F+ A +WG G+LG+G + P+ V+ + +I +ACG
Sbjct: 314 VDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHG--NKSDLYAPRHVEFKQ--KIIKIACG 369
Query: 393 YGHSLVIVD 401
H+ I +
Sbjct: 370 GSHAAFITE 378
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 36 RKGALDGNLVSPTRLRPLV----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
R G L GN S + +P + G V C A+ +G+ YTWG GQLG
Sbjct: 286 RNGQL-GNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLG 344
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG------ 145
HG+K P V K KI K G SH +TED FG GQLG G
Sbjct: 345 HGNKSDLYAPRHVE--FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASE 402
Query: 146 -SIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
SIR+ P+ V+ +V CG + T+ ++
Sbjct: 403 ASIRS--TPNLVQYFKGKQVVDVTCGGEHTIAIT 434
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 23/273 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L +P ++ L G+ I+ +A C HC+AV ++G +WGRN+ GQLG G P
Sbjct: 96 DLFTPQPIKALHGLRIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQ 153
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
+ +K AG HT VTEDG +GW ++G LG G + + P V +
Sbjct: 154 KIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGV 213
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG T+ +SS G + G +YGQLGHG +E P
Sbjct: 214 KMVKVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------------FEDHLTPH 257
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ AL I +++ G HT+A+ S G +Y WG+ +G++G + D P +V
Sbjct: 258 KLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ 317
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
V+ IS G ++ ++ WG+ N
Sbjct: 318 KVVH----ISCGWRHTLAVTERQNVFSWGRGTN 346
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 158/390 (40%), Gaps = 111/390 (28%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY------- 110
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L +
Sbjct: 18 VLLISAG--ASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75
Query: 111 ----------------------------------KIKKAGAGRSHTVVVTEDGNSLAFGW 136
+IK+ G SH + VT DG ++G
Sbjct: 76 GADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGR 135
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N++GQLG G+ + + P ++ V A GA+ T + E + G +YG L
Sbjct: 136 NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTA--AVTEDGELYGWGWGRYGNL 193
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G N+ + P ++ + G +VKVACG HT++V S G +YT+G+
Sbjct: 194 GLGDRND--------------RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 239
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
YG+LGH + +D P +++ Q N + + IS G ++ G+LY W
Sbjct: 240 SKYGQLGHGDFEDHLTPHKLEALQENLI----SEISGGWRHTMALTSDGKLYGW------ 289
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
GWN ++G++G G S P
Sbjct: 290 --------------GWN-------------------------KFGQVGVGDNVDHCS--P 308
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+V V+ ++CG+ H+L + +R NV
Sbjct: 309 VQVKFPHEQKVVHISCGWRHTLAVTERQNV 338
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +L L I ++ G H +A+ +G+ Y WG N+ GQ+G GD + P V
Sbjct: 254 LTPHKLEALQENLISEISGGWR--HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 311
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ K+ G HT+ VTE N ++G +GQLG G + P + L ++
Sbjct: 312 KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSAD 369
>gi|58271668|ref|XP_572990.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229249|gb|AAW45683.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 518
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 180/431 (41%), Gaps = 61/431 (14%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGC 65
M E G +L CG T W GR++ G + +L+ P LR L V + G
Sbjct: 1 MANESVEGSNWGRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGP 60
Query: 66 VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-----YKIKKAGAGRS 120
+ + + +D+ G Y +GR +G I + P +S S K AGRS
Sbjct: 61 SANYAIILDIHGAAYLFGRPPAMVQSNG-VISENTPLKISPSSVGSPKGTKWVNGAAGRS 119
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTATACGADFTVW 175
H ++V +G+ G N GQ+G ++ VR ++V G F+++
Sbjct: 120 HFLLVDSNGDVWGCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLF 179
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + +G ++GQLG+G E K K+AY+ + + L I ++A
Sbjct: 180 LTFT--GQVYASGSSEFGQLGNGKTGERLVKAG--KIAYDIELSQGLVQGLENVKITEIA 235
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H++A+D GYVY+WGF GY RLG ++QKD +
Sbjct: 236 SGNQHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLI------------------------ 271
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSSCI 352
+ T GQ Y + K+ + D+ + SG HF+ + +
Sbjct: 272 -FALTGSTGQPYT--RFKH----------IQDVMACKVIKTSSGGCTHFITTPDPEGGVM 318
Query: 353 SWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
+ G Q YGELG G KS+ P+K+ L G+ +I V G +L + + L
Sbjct: 319 TVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLARPNSALSDL 378
Query: 410 DQLDVYDGKAS 420
D+ ++ AS
Sbjct: 379 DRYPLHINSAS 389
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 59 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 114
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 115 TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 174
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL S+V ACG + ++ V + G GQLG
Sbjct: 175 GQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCS--MAVVNTGEVFVWGYNGNGQLGL 232
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 233 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 278
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 279 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 331
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 67/292 (22%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + T + G N G LG G +++ IEP + L ++ + G+ +
Sbjct: 45 GSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHI 104
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N A P I+ L+ + +++
Sbjct: 105 VLATTEG-EVFTWGHNAYSQLGNGTTN--------------AGLVPYHISTNLSNKQVIE 149
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG+ H++ + S G V+ WG+ G++G ++ +PRRV ++ V+ I+ G
Sbjct: 150 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVV---VNIACG 206
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ S G++++W G+N GN
Sbjct: 207 QMCSMAVVNTGEVFVW--------------------GYN------GN------------- 227
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G G + + P +V L+G+ V VACGY H+LV+ D V
Sbjct: 228 ------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEGQV 271
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + G++Y+W G+N
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 155/368 (42%), Gaps = 33/368 (8%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIV 104
SP + G I VA G H +AV G WG N GQLG G I P V
Sbjct: 83 SPVSVNVPAGTTITAVAGGA--GHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAV 140
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
+ + G H + VT G +LA+G N GQLG GS P V + +
Sbjct: 141 DVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTI 200
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
TA A G ++ ++S A L G GQLG GT DSS+ +A +
Sbjct: 201 TAVAAGQGHSLAVTSAGTA--LAWGDNSSGQLGDGT-----ATDSSIPVAADVP------ 247
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AG TI VA G H++A+ S G V WG G G+LG P VDV V
Sbjct: 248 ---AGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTV 304
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMY----PKPLMDLSGWNLRCMD 337
++AG +S G + WG GD P + +G + +
Sbjct: 305 ----TAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVA 360
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+G+ H V + + ++WG +G+LG G SS +P VD+ G V ++A G HS
Sbjct: 361 TGSGHSLAVTSTDTALAWGDNTFGQLGDG--STTSSIIPVAVDLPAGTTVTAIAGGSFHS 418
Query: 397 LVIVDRTN 404
L IV T+
Sbjct: 419 LAIVPSTS 426
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 158/377 (41%), Gaps = 38/377 (10%)
Query: 36 RKGALDGNLVSPTRLRPLVGVD----IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
R ++ G P + ++GV R +A G S A G WG N G+LG
Sbjct: 18 RSASVRGLFAVPLLVAIVLGVTSVGAARVLAQGVPSA---AAGPPGTGLAWGTNSAGRLG 74
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNE 150
G P V+ + I G H++ VT G +LA+G N GQLG G +I +
Sbjct: 75 DGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSS 134
Query: 151 IEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P V + VTA + G + ++S A L G +GQLG G+ T
Sbjct: 135 STPVAVDVPAGTTVTALSGGGVHNLAVTSAGTA--LAWGDNFWGQLGDGSTTRSRT---- 188
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
P A+ AG TI VA G H++AV S G WG G+LG D
Sbjct: 189 ----------PVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDS 238
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPL 325
+P DV + ++AG ++S GG + WG + +G P+
Sbjct: 239 SIPVAADVPAGTTI----TAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPV 294
Query: 326 -MDL-SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+D+ +G + + +G H V + ++WG G+LG G S+ P V++
Sbjct: 295 AVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSST--PVAVNVPA 352
Query: 383 GMHVISVACGYGHSLVI 399
G + +VA G GHSL +
Sbjct: 353 GTTITAVATGSGHSLAV 369
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 19/265 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V I+ V HC+A+ EG Y+WG + G+LGHG+K +RP ++
Sbjct: 657 PTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIES 716
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L ++ G +H+ +T G +G ++G+LG G +++ P V L V
Sbjct: 717 LRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRC 776
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + + + G YG+LG G + P +
Sbjct: 777 VACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKV--------------PLRVDL 822
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G +++V CG+ +VA+ + G VYTWG G Y RLGH P+RV Q V+
Sbjct: 823 LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVI- 881
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ G++Y WG
Sbjct: 882 ---CIAVGSLHCVACTDTGEVYTWG 903
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 136/330 (41%), Gaps = 76/330 (23%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G WG N RGQLG + + P LS + + G VT DG A G+
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGY 640
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG G + P+ + L + +V + G + LS+ EG + + G
Sbjct: 641 GAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNS-GGKHCLALSA-EG-EVYSWGEGDD 697
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + RPR I +L G+ +V VACG H+ + + G +YT
Sbjct: 698 GKLGHGNKSSCE--------------RPRVIESLRGKEVVDVACGGAHSACITASGELYT 743
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WG G YGRLGH + D+ P++V+
Sbjct: 744 WGKGRYGRLGHGDSDDQLRPKKVEA----------------------------------- 768
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
LSGW +RC+ SG+ D C+ SWG YG+LG G G
Sbjct: 769 ---------------LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG--GS 811
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+P +VD+L+GM VI V CG S+ +
Sbjct: 812 DGCKVPLRVDLLQGMGVIRVECGSQFSVAL 841
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 151/339 (44%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ L IKK +G H + ++ +
Sbjct: 627 FAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAE 686
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G G+LG G+ + P + L EV ACG + +++ +
Sbjct: 687 GEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITA--SGELYTW 744
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG ++ Q RP+ + AL+G + VACG+ T+ V
Sbjct: 745 GKGRYGRLGHGDSDD--------------QLRPKKVEALSGWRVRCVACGSGDAQTLCVT 790
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP RVD+ Q V+ + GS S G
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVI----RVECGSQFSVALTASGS 846
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+Y WGK L + DD + PK + L G + C+ G++H D+ +WG
Sbjct: 847 VYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDND 906
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G P+ V L+G + V+CG H++
Sbjct: 907 EGQLGDGTVNAIHK--PRLVAALQGKKINRVSCGSAHTV 943
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P IAAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V + +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 135/308 (43%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKV---AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D +WG YG+LG G +S P I+E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---IVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + G++Y+W G+N
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVW--------------------GYN---- 237
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 238 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 274
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 275 LVLTDEGQV 283
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 129/260 (49%), Gaps = 17/260 (6%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D+ +KG G +V +L PL+ I+ V + AV G+ +TWG NE+
Sbjct: 197 DSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEK 256
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
GQLG GD+ P V + I GR H V+++ G+ +G GQLG G +
Sbjct: 257 GQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKL 316
Query: 148 RNEIEPSPVRC------LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
++ + P V L +V ACGA+FT+ L +V+G + + G +YGQLG +N
Sbjct: 317 KSCLHPKKVLAFSEADQLNQKVRQVACGANFTMAL-TVDG-RLWSFGHGEYGQLGATEEN 374
Query: 202 EYN------TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
+Y + + + A+ P+ + ALA + +V CG HT+ V VY+WG+
Sbjct: 375 QYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGW 434
Query: 256 GGYGRLGHREQKDEWVPRRV 275
G G LG ++K + VP+RV
Sbjct: 435 GASGCLGFGDRKFQLVPQRV 454
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + IV V+CG H + +G ++TWG G +G+LGH + K P++V F
Sbjct: 270 PQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFS 329
Query: 280 RNNVLPPEA-VISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWM--------- 320
+ L + ++ G+ + G+L+ +G +N DW
Sbjct: 330 EADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNE 389
Query: 321 --------YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKS 371
P+ + L+ ++ + G++H V D+ SWG G LG+G +K
Sbjct: 390 REAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFG--DRKF 447
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
+P++V L G V S++ G HSLV+
Sbjct: 448 QLVPQRVPALSGEIVSSISAGEKHSLVV 475
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 46/356 (12%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
++G N++ QLGH + P+++ LS +I + G +H++ VTE G+ +FG + G
Sbjct: 5 SFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREG 64
Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV-------------EGASILN 186
QLG N P+ + L E +T ACG ++ L+ + A L
Sbjct: 65 QLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLE 124
Query: 187 A--GLPQYGQLGHGT---DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
A GL + +G + + + S K AY+ P + I+ + ++
Sbjct: 125 APSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYD--PTSKNISNVNSQS-----AQNEDA 177
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-----PEAV-ISAGSV 295
+ +K + G G EQK + + + VD Q +L + V +SAG
Sbjct: 178 EDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWA 237
Query: 296 NSSCTAGGGQLYMWGKLKNN----GDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADS 349
S+ G+++ WG + GD W + P+ + + ++ + G H V +D
Sbjct: 238 YSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQ 297
Query: 350 -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE-----GMHVISVACGYGHSLVI 399
+WG +G+LG+G KS PKKV V VACG ++ +
Sbjct: 298 GDLFTWGLGVFGQLGHGKL--KSCLHPKKVLAFSEADQLNQKVRQVACGANFTMAL 351
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
K+ Q P + ++ + +V ++ G ++ AV G V+TWGF G+LG ++
Sbjct: 209 KIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHG 268
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----------KLKNNGDDWM 320
+P++V F +++ +S G + + G L+ WG KLK+ +
Sbjct: 269 LPQQVKFFTNVHIVS----VSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKS----CL 320
Query: 321 YPKPLMDLS-----GWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQK---- 370
+PK ++ S +R + G N + D S+GH +YG+LG Q
Sbjct: 321 HPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWN 380
Query: 371 --------------SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
A+P++V+ L + V V CG+ H++V+ + +V
Sbjct: 381 RGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDV 429
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
++FG NK QLG ++ ++PS ++ L + +ACG + L+ E + + G
Sbjct: 4 ISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHS--LAVTEFGDVYSFGRG 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ GQLGH +YNT P I ALA E I +VACG H++A+ G +
Sbjct: 62 REGQLGH--PEKYNT------------AHPNVITALAHERITRVACGNFHSLALTDTGKI 107
Query: 251 YTWG 254
Y WG
Sbjct: 108 YEWG 111
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
S+++ G+ + QLGH + ++ P I L+G IV ACG H++
Sbjct: 2 SVISFGVNKQSQLGHALEKDH--------------LDPSVIQNLSGMRIVMSACGEAHSL 47
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
AV G VY++G G G+LGH E+ + P + + ++ G+ +S
Sbjct: 48 AVTEFGDVYSFGRGREGQLGHPEKYNTAHPNVITALAHERI----TRVACGNFHSLALTD 103
Query: 303 GGQLYMWGKL 312
G++Y WG+L
Sbjct: 104 TGKIYEWGQL 113
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L V ++ V G H + V + Y+WG G LG GD+ + P V
Sbjct: 399 PQQVEALASVKVKQVTCG--HLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQRVPA 456
Query: 107 LSKYKIKKAGAGRSHTVVV-TEDGNSLAFGW 136
LS + AG H++VV + D + AF +
Sbjct: 457 LSGEIVSSISAGEKHSLVVRSTDTTTFAFDY 487
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLTGKKIACLSYGS-GPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVNTGEVFVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE +++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N A
Sbjct: 71 LTGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTN--------------AG 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++++W G+N
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVNTGEVFVW--------------------GYN---- 208
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 209 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 245
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 246 LVLTDEGQV 254
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 165/383 (43%), Gaps = 55/383 (14%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C H V V GR +T+G NE GQLG G R++PT V L KI AGR HT+
Sbjct: 41 ACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTL 100
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGA 182
VT+ +FG G LG G + P+ + L +V ACG + ++ +
Sbjct: 101 AVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAIT--KNG 158
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ G GQLG D ++Y P + G++++ VACG HT
Sbjct: 159 ELYIWGSNSEGQLGLKNDT----------ISY-----PTMLD--LGKSVISVACGYYHTA 201
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSC- 299
V + G +YT+G G+LG + + + V P+ V IS V +C
Sbjct: 202 VVTADGKLYTFGETEGGKLG------------LGDIEAHKVTKPKVVKGISGKVVKVACG 249
Query: 300 ------TAGGGQLYMWGKLKNN----GDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVG 346
GQ+Y +G +N G M PK + LS ++ + G H V
Sbjct: 250 GNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV 309
Query: 347 ADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D ++G ++G+LG G + P KV L+ V+ +ACG H++V +
Sbjct: 310 SDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACN---- 365
Query: 406 GERLDQLDVYDGKASSQDNEEID 428
++D+L D S N+E+D
Sbjct: 366 --KIDKLANGDDDNESSSNDEVD 386
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 37/303 (12%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
K+ G HTVVVTE+G FG N+ GQLG GS + +P+ V+ L E +T A G
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T L+ + + + G G LGHG + + N P +I +L +
Sbjct: 96 RFHT--LAVTDSNKLYSFGQGSEGALGHGDETDLNM--------------PTSIESLEDK 139
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ +ACG H+ A+ G +Y WG G+LG + + P +D+ ++V
Sbjct: 140 DVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISY-PTMLDL--------GKSV 190
Query: 290 ISA--GSVNSSCTAGGGQLYMWGKLKNN----GDDWMY----PKPLMDLSGWNLRCMDSG 339
IS G +++ G+LY +G+ + GD + PK + +SG ++ G
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGG 250
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
N + A ++G Q G+LG G S+ +PK V+ L + +ACG H+ V+
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLGSKIMDSN-IPKLVEALSKRKIKHIACGESHTAVV 309
Query: 400 VDR 402
D+
Sbjct: 310 SDK 312
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSE 106
T+ + + G+ + V C H VA+ G+ YT+G + GQLG G KI + P +V
Sbjct: 231 TKPKVVKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA 290
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVT 164
LSK KIK G SHT VV++ G FG +HG+LG G S N +P V+ L +
Sbjct: 291 LSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIV 350
Query: 165 A-TACGADFTV 174
ACG T+
Sbjct: 351 LHIACGGCHTI 361
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
K GEL GS +G L + +S PT ++ + ++ C H V +
Sbjct: 156 KNGELYIWGSNSEGQLG-----LKNDTISYPT----MLDLGKSVISVACGYYHTAVVTAD 206
Query: 77 GRCYTWGRNERGQLGHGD--KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+ YT+G E G+LG GD + +P +V +S K+ K G +HTV +T G F
Sbjct: 207 GKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTF 265
Query: 135 GWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQY 192
G ++GQLG GS I + P V L ++ ACG T +S + + G ++
Sbjct: 266 GSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVS--DKGELFTFGDGRH 323
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
G+LG G + ++ +P + L ++ +ACG HT+
Sbjct: 324 GKLGQGDE------------SFSNLFKPVKVQRLKEFIVLHIACGGCHTIV 362
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + G++Y+W G+N
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 69 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 124
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 125 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 184
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 185 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 242
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 243 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 288
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 289 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 341
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 38 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 97
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 98 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 142
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 143 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 202
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 203 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 256
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 257 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 309
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 83 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 138
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 139 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 198
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++ V ACG + ++ V+ + G GQLG
Sbjct: 199 GQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 256
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P IAAL G + +VACG HT+ + +G VY WG
Sbjct: 257 GSGGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 302
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V + +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 303 YGQLGTGNKSNQSYPTPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 355
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + T + G N G LG G +++ IEP + L ++ + G+ V
Sbjct: 69 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHV 128
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P I+ L+ + +++
Sbjct: 129 VLATTEG-EVFTWGHNAYSQLGNGTTNH--------------GLVPCHISTNLSNKQVIE 173
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG+ H++ + S G V+ WG+ G++G ++ +PRRV +N + I+ G
Sbjct: 174 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTV---VNIACG 230
Query: 294 SVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+ S G++Y+WG N +G + P + L G ++ + G H V
Sbjct: 231 QMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 290
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
D + +WG YG+LG G +S P I+E +I + AC H+
Sbjct: 291 DEGQVYAWGANSYGQLGTGNKSNQSYPTPV---IVEKDRIIEIAACHSAHT 338
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P IAAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V + +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPAPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V I+ G + S G++Y+WG N G P P + L G
Sbjct: 176 GCLQNKV---AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 232
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D + +WG YG+LG G +S P I+E +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---IVEKDRIIEI 289
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 290 AACHSAHT 297
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 150/365 (41%), Gaps = 74/365 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L+G +I VA C S H +A+ G Y+WG GQLGHGD + P ++
Sbjct: 44 PKQLGGLLGEEI--VAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAF 101
Query: 107 LSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS----PVRCLV 160
+ K+ G H+ VT DG +G GQLG + E E + PV+C +
Sbjct: 102 FEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLG---LPKEFEAAHESFPVKCPL 158
Query: 161 SE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
E V +CG T L+++ + G GQLG G+ +T D+ +
Sbjct: 159 LEGVADESVVKVSCGGTHTAALTNLGRVYVWGRG--DSGQLGIGSAWLKDTDDNGLL--- 213
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
RP + GE +V+VACG H+ AV +G+VY WG YG LG + D+ P+R
Sbjct: 214 -GVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKR 272
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
V+ F P +S G ++ A G Y +G+
Sbjct: 273 VEFFDDI----PALRVSCGGWHTMVVAKSGDCYAFGR----------------------- 305
Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+YG LG G KS P V L+G VI ACG
Sbjct: 306 ----------------------GEYGRLGLGD--TKSRTRPHLVKALKGQTVIQAACGGS 341
Query: 395 HSLVI 399
H+L +
Sbjct: 342 HTLFV 346
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G V A P+ + L GE IV V+CG+ HT+A+ + G VY+
Sbjct: 21 GQLGTGAKRRPTLAIDDV----SASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYS 76
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
WG+G G+LGH + K VP+++ F++ + +S G +S+ G LYMWG+
Sbjct: 77 WGWGSMGQLGHGDLKSINVPQKIAFFEQEGL--KVDYVSCGGCHSAAVTNDGTLYMWGET 134
Query: 312 ----------LKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ + + PL++ ++ ++ + G H + + WG
Sbjct: 135 HWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDS 194
Query: 360 GELGYGPYGQKSS--------AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G K + + P V+ G V+ VACG HS + ++ +V
Sbjct: 195 GQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C + H AV +G Y WG+ + G LG G + P V + G
Sbjct: 228 KVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCG 287
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
HT+VV + G+ AFG ++G+LG G ++ P V+ L + V ACG T++++
Sbjct: 288 GWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVT 347
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S +G + + AG P +G+LG + K SV + P P + +V+ G
Sbjct: 348 S-DGIAYV-AGRPDHGRLG-----MTDMKPLSVPTRLDLGPIP----------VRQVSAG 390
Query: 238 TNHTVAV 244
H++A+
Sbjct: 391 GAHSMAL 397
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
DI + C H + V G CY +GR E G+LG GD R RP +V L + +A
Sbjct: 278 DIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAA 337
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG-------SGSIRNEIEPSPVR 157
G SHT+ VT DG + G HG+LG S R ++ P PVR
Sbjct: 338 CGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVR 385
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 164/360 (45%), Gaps = 46/360 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++R L G +A S H +AV +G + WG N G+ G G R P V
Sbjct: 339 PVQVRGLSG----GMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQG 394
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L AG +H++ DG+ A+G N GQLG G+ RN P V+ L S V A
Sbjct: 395 LGGGV--AVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGL-SGVVAV 451
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G D ++ L S S+ G YGQLG GT R + L
Sbjct: 452 AAGFDHSLALRS--DGSVWAWGSNAYGQLGEGTTTN----------------RLVPVQVL 493
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G +V VA G+NH++AV S G V+TWG YG+LG + VP +V L
Sbjct: 494 SG--VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQV------QGLSG 545
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGN 340
A ++AGS +S G ++ WG + GD + + P + LSG + +G
Sbjct: 546 VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSG--GVAVAAGG 603
Query: 341 MHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H V +D + +WG +GELG G +S +P +V L G V++V G HSL +
Sbjct: 604 FHSLVVRSDGTVWTWGSNSFGELGDGTTTSRS--VPVQVQGLSG--VVAVDAGNSHSLAV 659
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 165/364 (45%), Gaps = 46/364 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N SP +++ L G VA H +A +G + WG N+ GQLG G P
Sbjct: 385 NRASPVQVQGLGG----GVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPV 440
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V LS + AG H++ + DG+ A+G N +GQLG G+ N + P V +S
Sbjct: 441 QVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQV---LSG 495
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A A G++ + L+ ++ G YGQLG GT + + P
Sbjct: 496 VVAVAAGSNHS--LAVRSDGTVWTWGSNLYGQLGDGTTSN--------------RLVPVQ 539
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L+G + VA G+ H++AV S G V+ WG G LG + VP RV
Sbjct: 540 VQGLSG--VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPG----- 592
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWM----YPKPLMDLSGWNLRCM 336
L ++AG +S G ++ WG GD P + LSG + +
Sbjct: 593 -LSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLSG--VVAV 649
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
D+GN H V +D + +WG+ YG+LG G ++S +P +V L G V+++A G H
Sbjct: 650 DAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRS--VPVQVPGLSG--VVAMATGALH 705
Query: 396 SLVI 399
LV+
Sbjct: 706 PLVV 709
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 175/400 (43%), Gaps = 53/400 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P ++ L GV VA S H +AV +G + WG N GQLG G R P
Sbjct: 85 NHSAPVQVPGLSGV----VAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV 140
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V LS + AG S+++ V DG A+G N GQLG G+ N + P V L S
Sbjct: 141 RVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGL-SG 197
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V + A G+ + L+ + S+ G GQLG GT + P
Sbjct: 198 VVSVAAGSSHS--LAVLSDGSVWAWGANSSGQLGDGTKIN--------------RLVPVQ 241
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L+G VA G H++AV S G V+TWG +G+LG + D VP RV +
Sbjct: 242 VPGLSGVV--AVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGL--SG 297
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCM 336
V+ + GS +S G ++ WG + GDD P + LSG +
Sbjct: 298 VVASD----VGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSG--GMAV 351
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
+G+ H VG+D + +WG GE G G ++S P +V L G ++VA G+ H
Sbjct: 352 TAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRAS--PVQVQGLGGG--VAVAAGFNH 407
Query: 396 SLVIVDRTNVGERLD-QLDVYDGKASSQDNEEIDRNSTVP 434
SL R D + + S Q + RNST P
Sbjct: 408 SLA--------ARSDGSVWAWGSNDSGQLGDGTTRNSTSP 439
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 146/330 (44%), Gaps = 42/330 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N SP +++ L GV VAAG H +A+ +G + WG N GQLG G R P
Sbjct: 435 NSTSPVQVQGLSGV--VAVAAGF--DHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVP- 489
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V LS + AG +H++ V DG +G N +GQLG G+ N + P V+ L S
Sbjct: 490 -VQVLSG--VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGL-SG 545
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A A G+ + L+ S+ G G+LG GT + + P
Sbjct: 546 VAAVAAGSFHS--LAVHSDGSVWAWGSNSSGELGDGTTSN--------------RLVPGR 589
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L+G V VA G H++ V S G V+TWG +G LG VP +V
Sbjct: 590 VPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQV------Q 641
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWM----YPKPLMDLSGWNLRCM 336
L + AG+ +S G ++ WG GD P + LSG + M
Sbjct: 642 GLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSG--VVAM 699
Query: 337 DSGNMHHFVG-ADSSCISWGHAQYGELGYG 365
+G +H V +D + +WG+ +G+LG G
Sbjct: 700 ATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 42/346 (12%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+AAG S + +A+ +G + G N+ GQLG G P V LS + AG S
Sbjct: 51 LAAG--SSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLS--GVVAVAAGSS 106
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
H++ V DG A+G N GQLG G+ + P V+ L S V + A G+ ++ L+
Sbjct: 107 HSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGL-SGVVSVAAGSSYS--LAVRS 163
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G GQLG GT + + P + L+G +V VA G++H
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSN--------------RLVPVQVPGLSG--VVSVAAGSSH 207
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++AV S G V+ WG G+LG + + VP +V L ++AG+ +S
Sbjct: 208 SLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVP------GLSGVVAVAAGAAHSLAV 261
Query: 301 AGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCIS 353
G ++ WG GD D + P + LSG + D G+ H + +D S +
Sbjct: 262 RSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSG--VVASDVGSYHSLALRSDGSVWA 319
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WGH G+L G S ++P +V L G ++V G HSL +
Sbjct: 320 WGHNSSGQL--GDDSSTSRSVPVQVRGLSGG--MAVTAGSSHSLAV 361
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ AG S+++ + DG A G N GQLG G+ N P V L S V A A G+
Sbjct: 49 ARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGL-SGVVAVAAGSSH 107
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ L+ ++ G GQLG GT ++++L P + L+G +V
Sbjct: 108 S--LAVRHDGTVWAWGSNSDGQLGDGT--------TTMRLT------PVRVQGLSG--VV 149
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
VA G+++++AV S G V+ WG G+LG + VP +V L ++A
Sbjct: 150 SVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVP------GLSGVVSVAA 203
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-V 345
GS +S G ++ WG + GD + + P + LS + + +G H V
Sbjct: 204 GSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLS--GVVAVAAGAAHSLAV 261
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D + +WG +G+LG G + +P +V L G V++ G HSL +
Sbjct: 262 RSDGTVWTWGANSFGQLGDGTKSDR--LVPVRVQGLSG--VVASDVGSYHSLAL 311
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +++ L GV VA + H +AV +G +TWG N GQLG G +R P V
Sbjct: 637 PVQVQGLSGV----VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPG 692
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
LS GA H +VV DG A+G+N GQLG+GS
Sbjct: 693 LSGVVAMATGA--LHPLVVRSDGTVWAWGYNSFGQLGNGS 730
>gi|170059416|ref|XP_001865354.1| regulator of chromosome condensation [Culex quinquefasciatus]
gi|167878220|gb|EDS41603.1| regulator of chromosome condensation [Culex quinquefasciatus]
Length = 293
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 19/171 (11%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
GR+HT+ +T+ G A G NK GQ G G+ + I + R S + CGADF+
Sbjct: 117 ACGRNHTLFLTDTGCVYACGDNKSGQCGVGNTQPIISKA-TRLNYSGPPIIKVGCGADFS 175
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
+ L ++G ++ + GLP+YGQLGH TD +Y +S K+++ + P+ I +T
Sbjct: 176 MILD-IKG-NLYSFGLPEYGQLGHNTDGKYFL--TSTKMSFHFETSPKQIVLYVEKTKEG 231
Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
IV ACG NH+VA+DSK ++WGFGG GRLGH EQKDE VP
Sbjct: 232 HVTPMEDIRIVDFACGNNHSVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVP 282
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 24/123 (19%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK------------------------ 95
+ GC + + +D++G Y++G E GQLGH
Sbjct: 165 IIKVGCGADFSMILDIKGNLYSFGLPEYGQLGHNTDGKYFLTSTKMSFHFETSPKQIVLY 224
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+++ + V+ + +I G +H+V + + ++G+ G+LG ++E+ PS
Sbjct: 225 VEKTKEGHVTPMEDIRIVDFACGNNHSVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPSE 284
Query: 156 VRC 158
+C
Sbjct: 285 NKC 287
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 37 KGALDGNLVSPT----RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
KG L N V T R+ +G + V C H +A+ +G Y+WG N GQLG
Sbjct: 113 KGQLGLNSVDCTERTPRMVKALGTSV-IVQIACGIEHSIALTNDGELYSWGSNREGQLGI 171
Query: 93 GDK-IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
G + +P + L+ I G HTVV+++ G A+G N GQLG + I
Sbjct: 172 GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231
Query: 152 EPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P +R L ++V ACG +F+V+L+ G AG+ YGQLGHG N N
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGM--YGQLGHG--NGMN------ 281
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDE 269
+ PR + L G T+ +++CG HT+A V S+G VY WG GG G+LG+R +
Sbjct: 282 ------EILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSA 335
Query: 270 WVPRRV 275
P V
Sbjct: 336 TTPLVV 341
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 35/352 (9%)
Query: 23 LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+FC GST +G G D N+ P ++ ++ +A G + V + +G+ Y+
Sbjct: 1 MFCWGSTIHGELGL-GGIEDENIFMPRQVDFAKANEVEQIACG--ENYTVTITNDGQVYS 57
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G N+ GQLGH R R ++ L + KK G HT+ V E G ++G N GQ
Sbjct: 58 CGNNDYGQLGHEKA--RKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115
Query: 142 LGSGSIR-NEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG S+ E P V+ L S + ACG + ++ L++ + + G + GQLG G+
Sbjct: 116 LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN--DGELYSWGSNREGQLGIGS 173
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ +P+ I LA I +ACG HTV + G V+ WG +G
Sbjct: 174 HTV-------------TEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFG 220
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC-----TAGGGQLYMWGKLKN 314
+LG + + VP ++ RN + A SV + T G G M+G+L +
Sbjct: 221 QLGLNDTQQRIVPCQLRTL-RNAKVCYAACGEEFSVFLTLDGGVFTCGAG---MYGQLGH 276
Query: 315 -NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELG 363
NG + + P+ +M+L G + + G H S +WG G+LG
Sbjct: 277 GNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 34/332 (10%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG G+LG G + P V ++++ G ++TV +T DG + G N
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNN 61
Query: 138 KHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG R ++ P + V + ACG+ T L+ E + + G GQLG
Sbjct: 62 DYGQLGHEKARKRLQLIPGLDAFVFK--KIACGSCHT--LAVNEWGQLFSWGCNMKGQLG 117
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
N+ D + + PR + AL IV++ACG H++A+ + G +Y+WG
Sbjct: 118 ------LNSVDCT-------ERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSN 164
Query: 257 GYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
G+LG E P+R+ P A I+ G ++ + G ++ WG+
Sbjct: 165 REGQLGIGSHTVTEIKPKRIITLAA----VPIAFIACGGYHTVVISKSGVVFAWGRNTFG 220
Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
N+ + P L L + G F+ D + G YG+LG+G
Sbjct: 221 QLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHG--N 278
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P++V L G V ++CG H+L +V
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCGKRHTLALV 310
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 61/191 (31%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVP-RRVD 276
PR + + ++ACG N+TV + + G VY+ G YG+LGH + ++ + +P
Sbjct: 25 PRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLDAF 84
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
VF++ I+ GS ++ GQL+
Sbjct: 85 VFKK---------IACGSCHTLAVNEWGQLF----------------------------- 106
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG G+LG + P+ V L ++ +ACG HS
Sbjct: 107 ----------------SWGCNMKGQLGLNSV-DCTERTPRMVKALGTSVIVQIACGIEHS 149
Query: 397 LVIVDRTNVGE 407
+ + TN GE
Sbjct: 150 IAL---TNDGE 157
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 173/371 (46%), Gaps = 62/371 (16%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
V+PT+ L GV VA H +A+ +G + WG N++GQLG ++R P V
Sbjct: 628 VTPTQAPALSGV----VALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAV 683
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
L+ + AG +H++V+ DG S ++G N +GQLG G+ + + P PV+ S +
Sbjct: 684 PGLAH--VVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--STLHPVPVQVPGPSAM 739
Query: 164 TATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
A G +D TVW G+ G+LG GT +
Sbjct: 740 KGVAAGGSHSLAVRSDGTVWAWGNNGS----------GELGDGTGLQ------------- 776
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+PRP + L + V V+ GTNH++AV S G V+ WG G+LG +VP RV
Sbjct: 777 -RPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRV 833
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWMYPKPLMDLS 329
N V+ +SAGS +S G ++ WG GD + P + L+
Sbjct: 834 SGL--NGVM----AVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT 887
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + +G H V +D + +WG+ YG+LG G Q+S P +V L GM +S
Sbjct: 888 G--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP--PVQVPGLAGM--VS 941
Query: 389 VACGYGHSLVI 399
VA G HSL +
Sbjct: 942 VAAGTYHSLAV 952
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA + H +AV +G + WG N +GQLG G I R P VS L+ + AG +
Sbjct: 790 VAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNG--VMAVSAGSA 847
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
H++ + DG A+G+N +GQLG + + P V L + V + A G + L+
Sbjct: 848 HSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGL-TGVVSIAAGTHHS--LAVRS 904
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G YGQLG GT + + P + LAG +V VA GT H
Sbjct: 905 DGTVWAWGYNFYGQLGDGTKIQ--------------RSPPVQVPGLAG--MVSVAAGTYH 948
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++AV S G V+ WG+ +G+LG +P V + + V+ A + V + T
Sbjct: 949 SLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP--VPISSSSGVIAAAANWHSLVVRTDGT 1006
Query: 301 AGGGQLYMWGKLKNN----GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
+WG NN GD D P P +G +R + SG H + +D +
Sbjct: 1007 -------VWGWGSNNASQLGDGSTSDRKMPTPSSVPNG--VRSISSGANHSLALRSDGTV 1057
Query: 352 ISWGHAQYGELGYG 365
+WG G+LG G
Sbjct: 1058 WAWGFGNSGQLGDG 1071
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 104/238 (43%), Gaps = 38/238 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV +AAG + H +AV +G + WG N GQLG G KIQR P V
Sbjct: 880 PIQVPGLTGV--VSIAAG--THHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPG 935
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + AG H++ V +G A+G+N HGQLG G+ + P P+ + A
Sbjct: 936 LAG--MVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVIAAA 993
Query: 167 A------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A D TVW G G++N D S + P P
Sbjct: 994 ANWHSLVVRTDGTVW--------------------GWGSNNASQLGDGST--SDRKMPTP 1031
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
++ + ++ G NH++A+ S G V+ WGFG G+LG VP V F
Sbjct: 1032 SSVP----NGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVSGF 1085
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VAAG H + + +G + WG N GQLG G I + P V L + G
Sbjct: 42 VAAGA--AHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQ 97
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
H++ + DG A+G N GQLG GS P V L + V A A G + L+ +
Sbjct: 98 HSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSL-NGVVAIAAGDHHS--LALLS 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
S+ G +GQLG D++V A P P + L+G +V ++ G+ H
Sbjct: 155 DGSVWAWGYNAHGQLG---------DDTTV-----ASPLPVQVQGLSG--VVALSAGSTH 198
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++AV S G V WG YG+LG + W P V + L + AG+ +S
Sbjct: 199 SLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLV------SSLTGVKSVVAGTFHSLAL 252
Query: 301 AGGGQLYMWGKLKNNGDDWM-------YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G + WG+ NG + P P++ N++ + +G+ H + +D +
Sbjct: 253 CSDGTVRAWGE---NGSGQLGISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVR 309
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG+ +G++G G Q+ + P +V + M S+A G HSL +
Sbjct: 310 AWGNNDHGQVGNGTISQQLT--PVQVPGVGRMK--SIAAGGAHSLAM 352
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 40/358 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GVD + H +AV +G + WG N G+LG G + R P V
Sbjct: 480 PVQVPGLAGVDT----VSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPG 535
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS + AG +H++ + DG A+G N +G LG G+ + P V L S V A
Sbjct: 536 LS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGL-SGVVAL 592
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G ++ L+ S+ G GQLG GT T P AL
Sbjct: 593 AAGNGYS--LAVDAQGSVWAWGYNGMGQLGDGTTTPRVT--------------PTQAPAL 636
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G +V +A G +H++A+ + G + WG G+LG + P V
Sbjct: 637 SG--VVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAVPGLAH------ 688
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++AG+ +S G WG +G ++P P+ ++ + +G H
Sbjct: 689 VVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSH 748
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V +D + +WG+ GELG G Q+ P+ V + ++V+ G HSL +
Sbjct: 749 SLAVRSDGTVWAWGNNGSGELGDGTGLQR----PRPVQVQGLGSAVAVSAGTNHSLAV 802
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 153/347 (44%), Gaps = 40/347 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA S H +A+ +G + WG N G LG G ++R P V LS + AG
Sbjct: 539 MVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLS--GVVALAAGN 596
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+++ V G+ A+G+N GQLG G+ + P+ L S V A A G ++ L +
Sbjct: 597 GYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPAL-SGVVALAAGDSHSLALRA- 654
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+G + G Q GQLG T E +T P A+ LA +V +A G
Sbjct: 655 DGVAWAWGGNDQ-GQLGDATTLERST--------------PAAVPGLA--HVVALAAGNA 697
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNS 297
H++ + + G +WG YG+LG VP +V P A+ ++AG +S
Sbjct: 698 HSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVP--------GPSAMKGVAAGGSHS 749
Query: 298 SCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G ++ WG + +G P+P+ + + +G H V +D +
Sbjct: 750 LAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVW 809
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG G+LG G + +P +V L G V++V+ G HSL +
Sbjct: 810 AWGGNSQGQLGDGT--GITRYVPVRVSGLNG--VMAVSAGSAHSLAL 852
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 44/360 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +++ L GV VA S H +AV +G+ WG N GQLG G +R P +VS
Sbjct: 180 PVQVQGLSGV----VALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSS 235
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ +K AG H++ + DG A+G N GQLG S P V L + V A
Sbjct: 236 LT--GVKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPVVVPGL-TNVQAL 292
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ ++ L S ++ G +GQ+G+GT ++ Q P + +
Sbjct: 293 AAGSAHSLALRS--DGTVRAWGNNDHGQVGNGTISQ--------------QLTPVQVPGV 336
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+ +A G H++A+ + G + WG G+LG + + P RV + QR +P
Sbjct: 337 G--RMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARV-LGQRIR-MP- 391
Query: 287 EAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPL----MDLSGWNLRCMDSGN 340
+ G+ +S G ++ WG GD P+ L L+G + + +
Sbjct: 392 ---LGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAG--VHTLSATT 446
Query: 341 MHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H AD + +WG +G+LG G Q+ +P +V L G V +V+ + HSL +
Sbjct: 447 SHSLAARADGTVWAWGDNAFGQLGDGTTTQR--LLPVQVPGLAG--VDTVSSMHQHSLAV 502
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 149/357 (41%), Gaps = 42/357 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV VA H +A+ +G + WG N GQLG + P V
Sbjct: 130 PIQVWSLNGV----VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG 185
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS + AG +H++ V DG A+G N +GQLG GS P V L + V +
Sbjct: 186 LS--GVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSL-TGVKSV 242
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
G ++ L S + + +G+ G G +T +P P + L
Sbjct: 243 VAGTFHSLALCS-------DGTVRAWGENGSGQLGISSTTR---------RPVPVVVPGL 286
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+ +A G+ H++A+ S G V WG +G++G+ + P +V R
Sbjct: 287 --TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPGVGRMK---- 340
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRC-MDSGNM 341
I+AG +S G + WG +G +P L G +R + +GN
Sbjct: 341 --SIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVL-GQRIRMPLGTGNR 397
Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
H + AD + +WG G+LG G ++ +P +V L G+H +S HSL
Sbjct: 398 HSLALHADGTVWAWGVNTAGQLGDGTDLPRT--LPVQVPGLAGVHTLSATT--SHSL 450
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 40/295 (13%)
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
++ AG +H++++ DG A+G N +GQLG G+ + P V+ L S V A A G
Sbjct: 40 EQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS-VVALAVGYQH 98
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
++ L S ++ G +GQLG G+D + P + +L G +V
Sbjct: 99 SLALRS--DGTVWAWGDNFFGQLGDGSDAQSQV--------------PIQVWSLNG--VV 140
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+A G +H++A+ S G V+ WG+ +G+LG P V V + V+ +SA
Sbjct: 141 AIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVAS--PLPVQVQGLSGVV----ALSA 194
Query: 293 GSVNSSCTAGGGQLYMWGK--LKNNGDD-----WMYPKPLMDLSGWNLRCMDSGNMHHF- 344
GS +S G++ WG GD W P + L+G ++ + +G H
Sbjct: 195 GSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWT-PVLVSSLTG--VKSVVAGTFHSLA 251
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +D + +WG G+LG ++ P V + +V ++A G HSL +
Sbjct: 252 LCSDGTVRAWGENGSGQLGI----SSTTRRPVPVVVPGLTNVQALAAGSAHSLAL 302
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--IGDIQST-IEPRRLNSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T D G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQSIRQACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIEPRRLNS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++Y+W G+N
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 158 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 230 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V EG YTWG N QLG+G P V
Sbjct: 104 IEPKRLDSLCGKKIACLSYG-SGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQV 162
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S L K+ + G H++V+T DG +G+N GQ+GSGS N+ P V CL ++
Sbjct: 163 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 222
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + ++ VE + G GQLG G+ QP P
Sbjct: 223 VVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 266
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V ++
Sbjct: 267 RIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTV-DKD 325
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GQ+YMWG+ +
Sbjct: 326 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VTE+ G N G LG+G +++ IEP + L ++ + G+ V
Sbjct: 69 GSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHV 128
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P ++ L + +++
Sbjct: 129 VLATEEG-EVYTWGHNAYSQLGNGTTNH--------------GLVPCQVSTNLVNKKVIE 173
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VYTWG+ G++G ++ +PRRV +N V+ I+ G
Sbjct: 174 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV---VNIACG 230
Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
+ S G++Y+WG N G P P + L G ++ + G H V
Sbjct: 231 QMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLT 290
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D I +WG YG+LG G + + + P V + + + AC H+
Sbjct: 291 DEGQIYAWGANSYGQLGTG--NKSNQSYPTTVTVDKDRVIEIAACHSAHT 338
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA GC H + + EG+ Y WG N GQLG G+K + P
Sbjct: 260 GNQPTPCRIAALQGIRVQRVACGCA--HTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 317
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
T V+ I+ A +HT
Sbjct: 318 TTVTVDKDRVIEIAACHSAHT 338
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 133/281 (47%), Gaps = 25/281 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V EG YTWG N QLG+G P V
Sbjct: 63 IEPRRLDSLCGKKIACLSYG-SGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S L K+ + G H++V+T DG +G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 181
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ ACG + ++ VE + G GQLG G+ QP P
Sbjct: 182 IVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V ++
Sbjct: 226 RIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-VVDKD 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
V+ A SA + S+ GQ+YMWG+ + G +P
Sbjct: 285 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR--GQSVTFP 321
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 67/288 (23%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + TE+ G N G LG+G +++ IEP + L ++ + G+ V
Sbjct: 28 GSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P ++ L + +++
Sbjct: 88 VLATEEG-EVYTWGHNAYSQLGNGTTNHGFV--------------PCQVSTNLVNKKVIE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VYTWG+ G++G ++ +PRRV +N ++ I+ G
Sbjct: 133 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV---VNIACG 189
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ S G++Y+W G+N GN
Sbjct: 190 QMCSMAVVENGEVYVW--------------------GYN------GN------------- 210
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G G + + P ++ L+G+ V VACGY H+LV+ D
Sbjct: 211 ------GQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVLTD 250
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 158 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 230 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V + ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ + GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKSQGGHVYMWGQCR 338
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMS---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 71 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 126
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 40 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V EG YTWG N QLG+G P V
Sbjct: 68 IEPRRLDSLCGKKIACLSYG-SGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQV 126
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S L K+ + G H++V+T DG +G+N GQ+GSGS N+ P V CL ++
Sbjct: 127 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 186
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ ACG + ++ VE + G GQLG G+ QP P
Sbjct: 187 IVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 230
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V ++
Sbjct: 231 RIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-VVDKD 289
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GQ+YMWG+ +
Sbjct: 290 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR 319
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 67/288 (23%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + TE+ G N G LG+G +++ IEP + L ++ + G+ V
Sbjct: 33 GSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHV 92
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P ++ L + +++
Sbjct: 93 VLATEEG-EVYTWGHNAYSQLGNGTTNHGFV--------------PCQVSTNLVNKKVIE 137
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VYTWG+ G++G ++ +PRRV +N ++ I+ G
Sbjct: 138 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV---VNIACG 194
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
+ S G++Y+W G+N GN
Sbjct: 195 QMCSMAVVENGEVYVW--------------------GYN------GN------------- 215
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G G + + P ++ L+G+ V VACGY H+LV+ D
Sbjct: 216 ------GQLGLGSSGNQPT--PCRIAALQGIRVQRVACGYAHTLVLTD 255
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 163/368 (44%), Gaps = 38/368 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+ R + C S H +A+ G +WGR E GQLGHG Q PT ++ L+ +
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVV 68
Query: 117 AGRSHTVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G +TV V G ++GW G+LG G + P P+ V ACG T+
Sbjct: 69 CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTL 128
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
++ +GA + G Q GQLG G N+ + P+ + AL GE + V
Sbjct: 129 VVTQGDGA-LYTFGRNQNGQLGLGHTNDCLS--------------PQLVTALQGERVSSV 173
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG+ H++A G V++WG+G YG LG + +D + P RV V + G
Sbjct: 174 ACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTS----VVCGW 229
Query: 295 VNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMD-SGNMHHFVGADS 349
+S+ G+++ +G K +GD + +P + + R +G H + ADS
Sbjct: 230 RHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADS 289
Query: 350 --SCISWGHAQYGELGYGPYGQKSSAMP----------KKVDILEGMHVISVACGYGHSL 397
+ +WG ++G+LG G +++ P + V +ACG+ H++
Sbjct: 290 EGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTV 349
Query: 398 VIVDRTNV 405
+ + V
Sbjct: 350 AVTEAGEV 357
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 153/344 (44%), Gaps = 48/344 (13%)
Query: 46 SPTRLRPLV--GVDIRFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
SPT + L GVD A C + + VAV G+ Y+WG + G+LGHG+ P
Sbjct: 52 SPTCIAALTDAGVD----AVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPR 107
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTE-DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
++ S + + G +HT+VVT+ DG FG N++GQLG G + + P V L
Sbjct: 108 PIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQG 167
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E V++ ACG++ + L++ E ++ + G +YG LG G + T P
Sbjct: 168 ERVSSVACGSEHS--LAATEAGTVFSWGWGRYGNLGDGDSQDRYT--------------P 211
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L G T+ V CG H+ V +G V+T+G+ YG+LGH + D P V Q
Sbjct: 212 TRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQH 271
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW--- 331
V + ++ G ++ G LY WG K + +D P P+
Sbjct: 272 CRV----STVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGG 327
Query: 332 ---------NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
+ + G H ++ + SWG G+LG+G
Sbjct: 328 VEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVA-AGCVSCHCVAVDV-EGRCYTWGRNER 87
W GR G++ P RP+ R VA C H + V +G YT+GRN+
Sbjct: 89 WGDFGRLGHGECGDVFVP---RPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQN 145
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
GQLG G P +V+ L ++ G H++ TE G ++GW ++G LG G
Sbjct: 146 GQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS 205
Query: 148 RNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
++ P+ V L VT+ CG + + + EG + G +YGQLGHG ++
Sbjct: 206 QDRYTPTRVVGLDGVTVTSVVCGWRHSA-VVTDEG-RVFTFGWSKYGQLGHGDHVDHT-- 261
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
RP +A L + VA G HT+A DS+G +Y WG+ +G+LG +
Sbjct: 262 ------------RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDS 309
Query: 267 KDEWVPRRVDVFQRNNVLPPE--------AVISAGSVNSSCTAGGGQLYMWGKLKN 314
+D P V F A+++ G ++ G++Y WG+ N
Sbjct: 310 EDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVN 365
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +SP + L G + VA C S H +A G ++WG G LG GD R PT
Sbjct: 155 DCLSPQLVTALQGERVSSVA--CGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPT 212
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L + G H+ VVT++G FGW+K+GQLG G + P V L
Sbjct: 213 RVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC 272
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+T G + EG ++ G ++GQLG G D+E + V +
Sbjct: 273 RVSTVAGGWRHTMAADSEG-NLYAWGWNKFGQLGLG-DSEDRAAPTPVA-GFGLAGGGVE 329
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
A + +ACG HTVAV G VY+WG G G+LGH ++D
Sbjct: 330 AGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H V EG +TWG N QLG+G P I
Sbjct: 63 IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
+ LS ++ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 181
Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V T ACG ++ V+ + G GQLG G QP P
Sbjct: 182 VVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--------------QPTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + +VACG HT+ + +G VY WG YG+LG + ++ P V V +++
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV-EKD 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A S + S+ GG +YMWG+ +
Sbjct: 285 RIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +R+ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 230 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
T V+ I+ A +HT
Sbjct: 277 TPVTVEKDRIIEIAACHSTHT 297
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V + +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTM-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + G++Y+W G+N
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG + +G G L N+ P ++ L +R V+ H +A+ +EG+
Sbjct: 2473 GKVFACGESTNGRLGL--GPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKL 2530
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG E G+LGHG+++ D P ++ ++ G SH+ + G +G ++
Sbjct: 2531 FSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEY 2590
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++P V+ S V ACG+ L+ + ++ + G +G+LG G
Sbjct: 2591 GRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRG 2650
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ SV P + L G+ + KVACG ++A+ + G V+TWG G Y
Sbjct: 2651 -----GSEGCSV---------PNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDY 2696
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ VD + ++ ++ G+++ GQ++ WG
Sbjct: 2697 YRLGHGNDTHVRKPQIVDGLRGKKIVD----VAVGALHCLAVTDSGQVFAWG 2744
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ S L L V +R VA H +A+ +G Y+WG + G+LGHG++ DRP
Sbjct: 3426 TVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPR 3485
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
++ L + G SH+ +T++ +G ++G+LG G +++ P V L +
Sbjct: 3486 VIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGN 3545
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG+ L + + + G YG+LG G + P
Sbjct: 3546 RVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKI--------------PM 3591
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L G + KV CG+ +VA+ G VYTWG G Y RLGH P+RV Q
Sbjct: 3592 KVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGK 3651
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ I+ GS++ + G++Y WG
Sbjct: 3652 KVI----TIATGSLHCVASTDTGEVYTWG 3676
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 21/245 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ EG Y+WG + G+LGHGD R+ PT+V+ L+ ++ + G +H+ VT +
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG GS +++ P V L + ACG+ L++ + ++ +
Sbjct: 88 GELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSW 147
Query: 188 GLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G YG+LG G+D N P++I L G + KV CG ++A+
Sbjct: 148 GDGDYGKLGRGGSDGCKN---------------PKSIERLQGLGVCKVYCGAQFSLALTR 192
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G V+TWG G RLGH + P+ V+ +V+ +S GS++ G++
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVD----VSVGSIHCLALTDAGEV 248
Query: 307 YMWGK 311
Y WG+
Sbjct: 249 YCWGR 253
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 78 RCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+ + WG N++ QLG G KI+ P + + K+++ G V+ DG A G
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKV--PVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479
Query: 136 WNKHGQLGSGSIR-NEIEPSPVRCLVSEV---TATACGADFTVWLSSVEGASILNAGLPQ 191
+ +G+LG G + N P + L S + + G + L ++EG + + G +
Sbjct: 2480 ESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMAL-TIEG-KLFSWGEGE 2537
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG N N P+ I + ++CG++H+ A+ S G +Y
Sbjct: 2538 DGKLGHG--NRMNCD------------HPKLIDTFKSSCVRDMSCGSSHSAAILSSGELY 2583
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
TWG G YGRLGH + P++V F + V+ I+ GS ++ A G ++ W
Sbjct: 2584 TWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVID----IACGSRDAQTLALTDDGTVWSW 2639
Query: 310 -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
GKL G + P P+ L G + + G + S + +WG Y L
Sbjct: 2640 GDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRL 2699
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G P+ VD L G ++ VA G H L + D V
Sbjct: 2700 GHG--NDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQV 2740
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 33/341 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA--- 133
G Y WG N RGQLG + + P + L+ + + G VT +G A
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+ G G+ ++ + ++ +V A G + LS+ + + G G
Sbjct: 3414 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSA--DGDVYSWGEGDDG 3471
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG N + RPR I AL G+ ++ ++CG +H+ + +YTW
Sbjct: 3472 KLGHGNRNSCD--------------RPRVIEALRGKGVIDISCGGSHSACITQNHELYTW 3517
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ +P+ V+ + N V+ + +G + C ++ W
Sbjct: 3518 GKGRYGRLGHGDSEDQLLPKVVEALRGNRVI--DVACGSGDAQTLCLTDDDCVWSWGDGD 3575
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L G + ++ G+ S + +WG Y LG+G
Sbjct: 3576 YGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHG- 3634
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
PK+V L+G VI++A G SL V T+ GE
Sbjct: 3635 -VDDHVRRPKRVAALQGKKVITIATG---SLHCVASTDTGE 3671
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 38/374 (10%)
Query: 38 GALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-K 95
G L G+ + L +G + ++ +A G S AV +G+ + G + G+LG G
Sbjct: 2435 GGLKGSKIKVPVLSEFIGALKVQQIAGG--SKTLFAVSHDGKVFACGESTNGRLGLGPLS 2492
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P + LS + ++K +G H + +T +G ++G + G+LG G+ N P
Sbjct: 2493 ANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHP 2552
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ S V +CG+ + + S + GL +YG+LGHG DN + K
Sbjct: 2553 KLIDTFKSSCVRDMSCGSSHSAAILS--SGELYTWGLGEYGRLGHG-DNYTHLK------ 2603
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
P+ + + ++ +ACG+ T+A+ G V++WG G +G+LG +
Sbjct: 2604 -------PKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCS 2656
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-L 325
VP V+ Q V ++ G+ S + G ++ WGK +G+D KP +
Sbjct: 2657 VPNPVEKLQGQGV----CKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQI 2712
Query: 326 MD-LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+D L G + + G +H DS +WG +G+ G + P+ V+ LEG
Sbjct: 2713 VDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNN--TTTVNRRPQLVNGLEG 2770
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 2771 QKITRVACGSSHSI 2784
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 31/260 (11%)
Query: 153 PSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P+ + CL E+ D +L+ + + G G+LGHG
Sbjct: 5 PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHG------------ 52
Query: 211 KLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+ PR P + LAG+ +++++CG+ H+ AV S+G +YTWG G YGRLGH +D
Sbjct: 53 ----DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSED 108
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDD-WMYP 322
+ VP V + ++++ + +G ++ A G ++ WG KL G D P
Sbjct: 109 QLVPVLVSGLRGHHII--DVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNP 166
Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
K + L G + + G + D S +WG + LG+G + PK V+ L
Sbjct: 167 KSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHG--TEDHVRHPKLVEAL 224
Query: 382 EGMHVISVACGYGHSLVIVD 401
+G HV+ V+ G H L + D
Sbjct: 225 DGKHVVDVSVGSIHCLALTD 244
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L G + + C S H AV EG YTWGR G+LGHG + P +VS
Sbjct: 60 PTLVTGLAGKQV--IRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSG 117
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L + I G+G +HT+ +DG ++G +G+LG G P + L V
Sbjct: 118 LRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGV 177
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CGA F++ L+ S+ G + +LGHGT++ P+ +
Sbjct: 178 CKVYCGAQFSLALT--RDGSVWTWGKGEGFRLGHGTEDHVR--------------HPKLV 221
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
AL G+ +V V+ G+ H +A+ G VY WG G+LG
Sbjct: 222 EALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRS 120
+SC H + YTWG+ G+LGHGD + P +V L ++ G+G +
Sbjct: 3498 ISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDA 3557
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
T+ +T+D ++G +G+LG G P V L+ V+ CG+ F+V L+
Sbjct: 3558 QTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALT-- 3615
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G Y +LGHG D+ RP+ +AAL G+ ++ +A G+
Sbjct: 3616 RSGAVYTWGKGDYYRLGHGVDDHVR--------------RPKRVAALQGKKVITIATGSL 3661
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
H VA G VYTWG G+LG PR V Q
Sbjct: 3662 HCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQ 3701
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L+G+ + V G S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 3590 PMKVESLIGLGVSKVECG--SQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAA 3647
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L K+ G H V T+ G +G N GQLG G+ P V L +++
Sbjct: 3648 LQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISR 3707
Query: 166 TACGADFTVWLSSVEGASILNAG-LP-----QYGQLGH 197
ACG+ T+ S+ + +NAG LP +Y L H
Sbjct: 3708 VACGSAHTIAWSTCKP---VNAGRLPDEVPMEYNHLQH 3742
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 17/198 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G + VA G + + + ++WG + G+LG G P V
Sbjct: 3536 PKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVES 3595
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L + K G +V +T G +G + +LG G + P V L +V
Sbjct: 3596 LIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVIT 3655
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ V +S + + G GQLG GT N A RPR + A
Sbjct: 3656 IATGSLHCV--ASTDTGEVYTWGDNDEGQLGDGTTN--------------AIARPRLVTA 3699
Query: 226 LAGETIVKVACGTNHTVA 243
L G+ I +VACG+ HT+A
Sbjct: 3700 LQGKKISRVACGSAHTIA 3717
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 59 RFVAAGCVSCHC-----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
R G +C +A+ +G +TWG+ E +LGHG + P +V L +
Sbjct: 171 RLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVV 230
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
G H + +T+ G +G N GQLG + EP+ V L S+ + ACG
Sbjct: 231 DVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P +S LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++ V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCS--MAVVDAGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P + V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPISV-EKDRIIEIAACHSTHT--SAAKTQGGNVYMWGQCR 338
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N + I+ G + S G++Y+W G+N
Sbjct: 200 GCLQNKAV---VNIACGQMCSMAVVDAGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+HV VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIHVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V EG YTWG N QLG+G P V
Sbjct: 103 IEPKRLDSLCGKKIACLSYG-SGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQV 161
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S L K+ + G H++V+T DG +G+N GQ+GSGS N+ P V CL ++
Sbjct: 162 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 221
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + ++ VE + G GQLG G+ QP P
Sbjct: 222 VVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 265
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IAAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V ++
Sbjct: 266 RIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTV-DKD 324
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GQ+YMWG+ +
Sbjct: 325 RVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 354
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VTE+ G N G LG+G I++ IEP + L ++ + G+ V
Sbjct: 68 GSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHV 127
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ EG + G Y QLG+GT N P ++ L + +++
Sbjct: 128 VLATEEG-EVYTWGHNAYSQLGNGTTNH--------------GLVPCQVSTNLVNKKVIE 172
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VYTWG+ G++G ++ +PRRV +N V+ I+ G
Sbjct: 173 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV---VNIACG 229
Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
+ S G++Y+WG N G P P + L G ++ + G H V
Sbjct: 230 QMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLT 289
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D I +WG YG+LG G + + + P V + + V AC H+
Sbjct: 290 DEGQIYAWGANSYGQLGTG--NKSNQSYPTTVTVDKDRVVEIAACHSAHT 337
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 75 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 130
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 131 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 190
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 191 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 248
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 249 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 294
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 295 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 347
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 44 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 103
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 104 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 148
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 149 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 208
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 209 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 265
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 266 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 322
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 323 AACHSAHT 330
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + L P RL L I ++ G H V EG +
Sbjct: 66 EIFVLGTNCSGCLGL--GDVQSTL-EPRRLDSLSDKKIACLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+WG N GQLG+G P+ I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 SWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ +EP +
Sbjct: 35 SLCSEEELQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDS 94
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + G+ + L++ EG + + G YGQLG+GT N
Sbjct: 95 LSDKKIACLSYGSGPHIVLATTEG-EVFSWGHNAYGQLGNGTINH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++Y+W G+N
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 132/275 (48%), Gaps = 29/275 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P R+ L G I ++ G H V +G Y WG N QLG+G P +V
Sbjct: 72 IEPRRIDVLCGKKIVSLSYG-TGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALV 130
Query: 105 SE--LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CL 159
S LSK ++ + G HT+ +T DG A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 131 STNLLSK-RVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCL 187
Query: 160 VSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
++V ACG + ++ ++ I G GQLG G + Q
Sbjct: 188 QNKVVVNIACGQLCS--MAVLDNGEIYGWGYNCNGQLGLGNNGN--------------QQ 231
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P IAAL G IV+VACG HT+A+ +G+VY WG YG+LG + ++ +P ++
Sbjct: 232 TPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPINTD 291
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ V E S S+ GQ+ MWG+ +
Sbjct: 292 KERIV---EVAACHTSHTSAAKTQSGQVLMWGQCR 323
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VT + A G N G LG G +++ IEP + L ++ + + G V
Sbjct: 37 GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 96
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ +G + G Y QLG+GT N T P ++ L + + +
Sbjct: 97 VIATADG-EVYAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLSKRVTE 141
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++HT+A+ + G VY WG+ G++G ++ PRRV +N V+ I+ G
Sbjct: 142 VACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV---VNIACG 198
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
+ S G++Y WG L NNG+ P + L G N+ + G H
Sbjct: 199 QLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ-QTPCRIAALQGVNIVQVACGYAHTLAL 257
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D + +WG YG+LG G + + A+P ++ + V AC H+
Sbjct: 258 TDEGFVYAWGANSYGQLGTG--NKSNQALPTPINTDKERIVEVAACHTSHT 306
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 159/379 (41%), Gaps = 74/379 (19%)
Query: 35 RRKGALDGNLVSPTRLRPLVG--VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
+R+ L + VS + +G D VA C S H +A+ G Y+WG GQLGH
Sbjct: 24 KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH 83
Query: 93 GDKIQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
GD + P ++ E + ++ G H+ VT+DG +G + GQLG + E
Sbjct: 84 GDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLG---LPKE 140
Query: 151 IEPS----PVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
E + PV+C + E + +CG T L+S + G GQLG G+
Sbjct: 141 YEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRG--DSGQLGIGSV 198
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ ++ S+ A RP + A GE +V+VACG H+ AV +G+VY WG YG
Sbjct: 199 WMKDPENESLMGA----SRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGM 254
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
LG + D+ +P+R++ F VL +S G ++ A G Y +G+
Sbjct: 255 LGVGQSSDQQIPKRLEYFDDIPVLR----VSCGGWHTVVVAKSGDCYAFGR--------- 301
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+YG LG G KS P V
Sbjct: 302 ------------------------------------GEYGRLGLG--DTKSRTRPHLVKA 323
Query: 381 LEGMHVISVACGYGHSLVI 399
L+G VI ACG H+L +
Sbjct: 324 LKGKTVIQAACGGSHTLFV 342
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 27/234 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G V A P+ I L E IV V+CG+ HT+A+ S G VY+
Sbjct: 17 GQLGTGAKRRPTLAIDDVS----ASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYS 72
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
WG+G G+LGH + K P+++ F++ + IS G +S+ G LY+WG
Sbjct: 73 WGWGSMGQLGHGDLKIINEPQKIAFFEQERL--EVDYISCGGCHSAAVTKDGTLYVWGES 130
Query: 311 -----------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
+ + P P + ++ G + + WG
Sbjct: 131 HWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDS 190
Query: 360 GELGYGPYGQKS--------SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G K ++ P + G V+ VACG HS + ++ +V
Sbjct: 191 GQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHV 244
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C + H AV +G Y WG+ + G LG G + P + + + G
Sbjct: 224 KVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCG 283
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
HTVVV + G+ AFG ++G+LG G ++ P V+ L + V ACG T++++
Sbjct: 284 GWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT 343
Query: 178 SVEGASILNAGLPQYGQLG 196
S A + AG P +G+LG
Sbjct: 344 SDGTAYV--AGRPDHGRLG 360
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
DI + C H V V G CY +GR E G+LG GD R RP +V L + +A
Sbjct: 274 DIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAA 333
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-------RNEIEPSPVR 157
G SHT+ VT DG + G HG+LG + R ++ P PVR
Sbjct: 334 CGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVR 381
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 58/306 (18%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L GV I +A C HC+AV V G ++WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 160
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G+ P + ++K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY----- 203
+ P V + + + ACG T+ +SS SI G +YGQLGHG ++
Sbjct: 221 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGDFEDHLVPHK 278
Query: 204 --------NTKDSSVKLAY----------------------------------------E 215
+++ +V+L + E
Sbjct: 279 LEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNE 338
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + + +V+VACG HT+A+ V++WG G G+LGH E D +P+ +
Sbjct: 339 DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 398
Query: 276 DVFQRN 281
D +
Sbjct: 399 DALSSD 404
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 56/378 (14%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ G +WGR E GQLGHGD R PT+++ + + G
Sbjct: 22 VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 77
Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
G HT +++ L ++GW G+LG G+ + P P++ L +T ACG
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 137
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
L+ + + G Q GQLG G NT+DS + P+ I A G
Sbjct: 138 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 181
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ +A G HT AV G +Y WG+G YG LG ++ D +P +V ++ +
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 237
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
++ G ++ + G +Y +G K +GD D + P L L + ++ +
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297
Query: 344 F----------------VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
F + AD WG ++G++G G + P +V+ V+
Sbjct: 298 FFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVV 355
Query: 388 SVACGYGHSLVIVDRTNV 405
VACG+ H+L + + NV
Sbjct: 356 QVACGWRHTLALTEAKNV 373
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 33/291 (11%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
V E + + AG SH+V + G ++G + GQLG G + P+ + +
Sbjct: 14 VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 73
Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ CGAD T S E + + G +G+LGHG N+ D
Sbjct: 74 PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHG-----NSSDVF--------- 118
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ I AL G I ++ACG +H +AV G+V++WG G+LG +D +P+++ F
Sbjct: 119 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF 178
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWN 332
+ V +I+AG+ +++ G LY WG+ N G DD + P+ + ++G
Sbjct: 179 EGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ + G H V + S ++G ++YG+LG+G + + +P K++ L+
Sbjct: 235 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALK 283
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEA 288
++V ++ G +H+VA+ S G V +WG G G+LGH + +D VP + F
Sbjct: 21 SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + QLY W G+L + N D P+P+ L G + + G+ H
Sbjct: 81 VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 140
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ EG+ V +A G H+ + +
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTE 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+ +G+ Y WG N+ GQ+G GD P V+ ++ K+ + G HT+ +TE N
Sbjct: 314 ALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 373
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-------ACGADFTVWLSSVEGASI 184
++G GQLG G I + P + L S+ +A A VW+S E +I
Sbjct: 374 FSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAI 433
Query: 185 L 185
+
Sbjct: 434 V 434
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P R+ L G I ++ G H V +G Y WG N QLG+G P +V
Sbjct: 63 IEPRRIDILCGKKIISLSYG-TGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
S L ++ + G HT+ +T DG A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 122 STNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179
Query: 161 SEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++V ACG + ++ ++ G GQLG G + Q
Sbjct: 180 NKVVVNIACGQLCS--MAVLDNGETYGWGYNCNGQLGLGNNGN--------------QQT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G I++VACG HT+A+ +G+VY+WG YG+LG + ++ VP +++ +
Sbjct: 224 PCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVPTLINMDK 283
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
V E S S+ GQ+ MWG+ + G YP
Sbjct: 284 ERMV---EVAACHTSHTSAAKTQSGQVLMWGQCR--GQAVAYP 321
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VT + A G N G LG G ++ IEP + L ++ + + G V
Sbjct: 28 GSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ +G + G Y QLG+GT N T P ++ L G+ + +
Sbjct: 88 VIATADG-EVYAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLIGKRVTE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
V+CG++HT+A+ + G VY WG+ G++G ++ PRRV +N V+ I+ G
Sbjct: 133 VSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVN---IACG 189
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
+ S G+ Y WG L NNG+ P + L G N+ + G H
Sbjct: 190 QLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQ-QTPCRIAALQGINIIQVACGYAHTLAL 248
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D + SWG YG+LG G + + A+P +++ + V AC H+
Sbjct: 249 TDEGFVYSWGANSYGQLGTG--NKSNQAVPTLINMDKERMVEVAACHTSHT 297
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN +P R+ L G++I VA G H +A+ EG Y+WG N GQLG G+K +
Sbjct: 218 NGNQQTPCRIAALQGINIIQVACG--YAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAV 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFG 135
PT+++ + ++ A SHT T+ G L +G
Sbjct: 276 PTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H V +G +TWG N QLG+G P I
Sbjct: 63 IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
+ LS ++ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + ++ V+ + G GQLG G+ QP P
Sbjct: 182 VVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V +++
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV-VVEKD 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A SA + S+ GG +YMWG+ +
Sbjct: 285 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 71 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 176 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 289
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 290 AACHSAHT 297
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACG--YAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
T V I+ A +HT
Sbjct: 277 TPVVVEKDRIIEIAACHSAHT 297
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N + P R+ L G I ++ G H V EG YTWG N QLG+G P
Sbjct: 255 NTIEPRRIDSLCGKKITCLSYG-SGPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPC 313
Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLV 160
VS L K+ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 314 HVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQ 373
Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ T ACG + ++ VE + G GQLG G+ QP
Sbjct: 374 NKIATNIACGQMCS--MAVVESGEVYVWGYNGNGQLGLGSSGN--------------QPT 417
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G + +V CG HT+ + +G +Y WG YG+LG + ++ P V V +
Sbjct: 418 PCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPV-E 476
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ ++ A SA + S+ G +YMWG+ +
Sbjct: 477 KDRIIEIAACHSAHT--SAAKTQSGHVYMWGQCR 508
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + TE+ G N G LG+G ++N IEP + L ++T + G+ V
Sbjct: 222 GSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHV 281
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ EG + G Y QLG+GT N P ++ L + +V+
Sbjct: 282 VVATAEG-EVYTWGHNAYSQLGNGTTNH--------------GLIPCHVSTNLVNKKVVE 326
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++H++ + S G VY WG+ G++G ++ +PRRV +N + I+ G
Sbjct: 327 VACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI---ATNIACG 383
Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
+ S G++Y+WG N G P P + L G ++ + G H V
Sbjct: 384 QMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLT 443
Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
D +WG YG+LG G +S +P V E +I + AC H+
Sbjct: 444 DEGQLYAWGANSYGQLGTGNKSNQSYPIPVPV---EKDRIIEIAACHSAHT 491
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDCLSGKKIACLSYG-SGPHVVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P ++AL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP + C
Sbjct: 11 SLCSEAELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDC 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ V L++ EG + G Y QLG+GT N
Sbjct: 71 LSGKKIACLSYGSGPHVVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++Y+W G+N
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVDTGEVYVW--------------------GYN---- 208
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 209 --GN-------------------GQLGLGSSGNQPT--PCRVSALQGIRVQRVACGYAHT 245
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 246 LVLTDEGQV 254
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P I+AL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A A + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-VVEKDRIIEIAACHLAHT--SAAKTQGGHVYMWGQCR 338
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 256
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHLAHT 321
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V + +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTM-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + G++Y+W G+N
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVW--------------------GYN---- 232
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G + + P +V L+G+ V VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 166/399 (41%), Gaps = 103/399 (25%)
Query: 34 GRRKGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
G+ KG + G N++ P + L + I+ ++ C H A+ +G YTWG +
Sbjct: 101 GKNKGGILGHYDITSFNMIQPELVEKLENIQIKQIS--CGPFHMAAISQDGELYTWGNKD 158
Query: 87 RGQLGH-----GDKIQRDR-------------PTIVSELSKYKIKKAGAGRSHTVVVTED 128
G+LGH +K++ R PT V L+ K K+ G TVV+TE+
Sbjct: 159 HGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN 218
Query: 129 GNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G +FG + GQLG S +P + L + CG F+ +SS +
Sbjct: 219 GEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL-QNIINIDCGQQFSAAVSS--SGKVYTW 275
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +GQLG+ + S+ Q RP + G I+ ++CG N A+ ++
Sbjct: 276 GNNDHGQLGN---------NQSI-----YQARPNQVTGFGGNKIINISCGDNFIAALSNE 321
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSCTAGGGQ 305
G ++TWG+G G+LGH + D + P++++ E +I G +++ Q
Sbjct: 322 GKLFTWGYGNDGQLGHSNRNDLYAPKQIEF--------KEKIIKVDCGGTHTAFLTQNNQ 373
Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
LY++G+ G++ G+LG G
Sbjct: 374 LYLFGR----GNE-----------------------------------------GQLGIG 388
Query: 366 PYGQKSSAM---PKKVDILEGMHVISVACGYGHSLVIVD 401
+ +A+ PK V+ + M V+ V CG ++L I +
Sbjct: 389 ENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y WG GQLG ++ + P V +LS I K A +S ++ +++DG +G NK
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104
Query: 139 HGQLGSGSIR--NEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G LG I N I+P V L + ++ +CG +S + + G +G+L
Sbjct: 105 GGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAIS--QDGELYTWGNKDHGKL 162
Query: 196 GHGTD---NEYNTKDSSVKLAY-EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GH N+ K + Y E P + +L G +V+CG TV + G VY
Sbjct: 163 GHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVY 222
Query: 252 TWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
++G G+LG++ E+ + P+++ Q N++ I G S+ + G++Y W
Sbjct: 223 SFGNSMKGQLGYQSEETGNFQPKKIPDLQ--NIIN----IDCGQQFSAAVSSSGKVYTWG 276
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSG---WNLRCMDSGNMHHFVGADSS---CISWGHAQ 358
G+L NN + P + G N+ C D +F+ A S+ +WG+
Sbjct: 277 NNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGD-----NFIAALSNEGKLFTWGYGN 331
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+ + PK+++ E +I V CG H+ + +
Sbjct: 332 DGQLGHS--NRNDLYAPKQIEFKE--KIIKVDCGGTHTAFLTQNNQL 374
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 42 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V + G GQLG
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P I+AL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A A + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPAPV-VVEKDRIIEIAACHLAHT--SAAKTQGGHVYMWGQCR 314
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + + +VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 232
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D +WG YG+LG G +S P ++E +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---VVEKDRIIEI 289
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 290 AACHLAHT 297
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V +CG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ IS G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMN---ISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P R+ L G I ++ G H V +G + WG N QLG+G P +V
Sbjct: 63 IEPRRIDVLCGKKIVSLSYG-TGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
S L ++ + G HT+ +T DG A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 122 STNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179
Query: 161 SEVTATA-CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S+V CG + ++ ++ I G GQLG G + Q
Sbjct: 180 SKVVVNVGCGQLCS--MAVLDNGEIYGWGYNCNGQLGLGNNGN--------------QQT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G +V+VACG HT+A+ +G+VY WG YG+LG + ++ +P ++ +
Sbjct: 224 PCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTLINTDK 283
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V E S S+ GQ+ MWG+ +
Sbjct: 284 ERMV---EVAACHTSHTSAAKTQSGQVLMWGQCR 314
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 31/291 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VT + A G N G LG G +++ IEP + L ++ + + G V
Sbjct: 28 GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ +G + G Y QLG+GT N T P ++ L G+ + +
Sbjct: 88 VIATADG-EVFAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLGKRVTE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++HT+A+ + G V+ WG+ G++G ++ PRRV ++ V+ + G
Sbjct: 133 VACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVN---VGCG 189
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
+ S G++Y WG L NNG+ P + L G N+ + G H
Sbjct: 190 QLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ-QTPCRIAALQGVNVVQVACGYAHTLAL 248
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D + +WG YG+LG G + + A+P ++ + V AC H+
Sbjct: 249 TDEGFVYAWGANSYGQLGTG--NKSNQALPTLINTDKERMVEVAACHTSHT 297
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I + G H + EG +
Sbjct: 136 EIFVLGTNCCGCLGL--GDIQST-IEPRRLDSLSGKKIACFSYG-SGPHVILATTEGEIF 191
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 192 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 251
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG +V + V+ + G GQLG
Sbjct: 252 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSV--AVVDNGEVYVWGYNGNGQLGL 309
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ +T P IAAL G + +VACG HT+ + +G VY WG
Sbjct: 310 GSSGNQST--------------PCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANS 355
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 356 YGQLGTGNKSNQSYPTPVAV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 408
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 105 SLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDS 164
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ V L++ EG I G Y QLG+GT N
Sbjct: 165 LSGKKIACFSYGSGPHVILATTEG-EIFTWGHNAYSQLGNGTTNHGLV------------ 211
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 212 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 269
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++Y+W G+N
Sbjct: 270 GCLQNKVV---VNIACGQMCSVAVVDNGEVYVW--------------------GYN---- 302
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G +S+ P ++ L+G+ V VACGY H+
Sbjct: 303 --GN-------------------GQLGLGSSGNQST--PCRIAALQGICVQRVACGYAHT 339
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 340 LVLTDEGQV 348
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 120/251 (47%), Gaps = 24/251 (9%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G + CG G G + ++ T +R L G+ I VAA H +AV +G
Sbjct: 519 KDGAVFTCGLNKSGQCG--NGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDG 576
Query: 78 RCYTWGRNERGQLGHGDKIQRDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
Y+WG N+RGQLG G I + P ++ L KY I A H+ VV+ +G L FG
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG 636
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG +++ P V L S+V T ACG T+ ++S G + + G YGQ
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITS--GGEVYSFGKNDYGQ 694
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET---IVKVACGTNHTVAVDSKGYVY 251
LG G + N K P + GE+ IV V+CG HTV + KG +
Sbjct: 695 LGLG--HARNMK------------VPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLI 740
Query: 252 TWGFGGYGRLG 262
TWG YG+LG
Sbjct: 741 TWGRNDYGQLG 751
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V G +G N+ GQLG + P +V LS I + G HT+ +T
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSG 681
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASI 184
G +FG N +GQLG G RN P+ V+ + E + A +CG TV +S E +
Sbjct: 682 GEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTIS--EKGKL 739
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G YGQLG G+ + N+ AQ P +++ I +CG HT+ +
Sbjct: 740 ITWGRNDYGQLGIGSKDHKNS----------AQYVPLPLSS----KIKTASCGCYHTLIL 785
Query: 245 DSKGYVYTWGFGGYGRLG 262
S G V +G G+LG
Sbjct: 786 MSNGRVMVFGRNNKGQLG 803
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 149/354 (42%), Gaps = 40/354 (11%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGA--GRSHTVVVTEDGNSL 132
+G +T G N+ GQ G+G +R T V LS I A G H + V DG
Sbjct: 520 DGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVY 579
Query: 133 AFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
++G+N GQLG GS I P + L + T + +L G+
Sbjct: 580 SWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMND 639
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG +T P+ + +L+ + I +VACG HT+A+ S G VY
Sbjct: 640 CGQLGLDHTQHQHT--------------PQLVDSLSSQVITEVACGLYHTIAITSGGEVY 685
Query: 252 TWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++G YG+LG ++ VP V + + + + +S G ++ + G+L W
Sbjct: 686 SFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKI---VAVSCGYYHTVTISEKGKLITW 742
Query: 310 GK---------LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQ 358
G+ K++ + Y P PL ++ G H + ++ + +G
Sbjct: 743 GRNDYGQLGIGSKDHKNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFGRNN 798
Query: 359 YGELGYGPYGQKSSAMPKKV--DILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
G+LG G S+ +P V + L V+ +A G+ S ++ R+ G LD
Sbjct: 799 KGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGCGLD 852
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 43 NLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
N+ PT ++ +G D + VA C H V + +G+ TWGRN+ GQLG G K ++
Sbjct: 702 NMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSA 761
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
V KIK A G HT+++ +G + FG N GQLG+GS
Sbjct: 762 QYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 148/340 (43%), Gaps = 31/340 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H VA+ G WG N GQLG G P VS + AGR H+V +T
Sbjct: 98 HSVALTAAGTVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSA 157
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G LA+G N GQLG G++ + P V S VTA A GA +V L+S ++L
Sbjct: 158 GTVLAWGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTS--AGTVLAW 215
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +GQLG GT + +T P A+A T+ VA G NH+VA+ S
Sbjct: 216 GGNPFGQLGDGTVVDRST--------------PVAVALPPSTTVTAVAAGGNHSVALTSA 261
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V WG +G+LG D P V + + ++AG ++S G +
Sbjct: 262 GTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVT----ASAVAAGRIHSLALTTAGGVL 317
Query: 308 MW-----GKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGADS--SCISWGHAQY 359
W G+L + + L + + + + + H V S + +SWG
Sbjct: 318 AWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLR 377
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G +S+ P V + G+ V ++A G HSL +
Sbjct: 378 GQLGDGTTTTRST--PVDVHLPTGVTVTAIAAGDDHSLAL 415
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 131/296 (44%), Gaps = 36/296 (12%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N G+LG+G P VS + AG +H+V +T G LA+G N HGQ
Sbjct: 59 WGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLAWGDNSHGQ 118
Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGA--DFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG G+ + + P V L + VTA+A A D +V L+S ++L G +GQLG GT
Sbjct: 119 LGDGTGADSLTPVGVS-LPAGVTASAVAAGRDHSVALTS--AGTVLAWGGNSFGQLGDGT 175
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ +T P A+A T+ VA G H+VA+ S G V WG +G
Sbjct: 176 VVDRST--------------PVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFG 221
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWGK--LKN 314
+LG D P V LPP ++ AG +S G + WG+
Sbjct: 222 QLGDGTVVDRSTPVAV-------ALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQ 274
Query: 315 NGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
GD D P + +G + +G +H + ++WG+ +G+LG G
Sbjct: 275 LGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ VAAG H VA+ G WGRN GQLG G + R PT+VS + A
Sbjct: 245 VTAVAAG--GNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVTASAVAA 302
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA---DFTV 174
GR H++ +T G LA+G N GQLG G+ L + T TA A +V
Sbjct: 303 GRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSST-PVSVTLPAATTITAISARDSQHSV 361
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
++S A L+ G GQLG GT +T P + G T+ +
Sbjct: 362 AMTSAGAA--LSWGRNLRGQLGDGTTTTRST--------------PVDVHLPTGVTVTAI 405
Query: 235 ACGTNHTVAVDSK 247
A G +H++A+ +
Sbjct: 406 AAGDDHSLALTAP 418
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G N G+LG+G+ N P V + A A G +V L++ ++L G
Sbjct: 57 LAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA--AGTVLAWGDN 114
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG GT + T P ++ AG T VA G +H+VA+ S G V
Sbjct: 115 SHGQLGDGTGADSLT--------------PVGVSLPAGVTASAVAAGRDHSVALTSAGTV 160
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLY 307
WG +G+LG D P V LPP ++ AG+ +S G +
Sbjct: 161 LAWGGNSFGQLGDGTVVDRSTPVAV-------ALPPSTTVTAVAAGATHSVALTSAGTVL 213
Query: 308 MWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
WG GD D P + + + +G H + + + ++WG +G
Sbjct: 214 AWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFG 273
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG G +S+ P V + G+ +VA G HSL +
Sbjct: 274 QLGDGTVVDRST--PTVVSLPAGVTASAVAAGRIHSLAL 310
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 34/333 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFG 135
Y WG GQLG G I+ ++ + S++ ++K +++ G HT+ +T +G A G
Sbjct: 4 YCWGDASHGQLGLGG-IENEQILLPSQI-EFKPDSPVQQIACGHRHTLFLTANGQVYACG 61
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N H QLG P P V ACG+ ++ L+ E IL+ G GQ+
Sbjct: 62 NNDHHQLGHELPTKRPLPIP-ELQAYVVIQIACGSRHSMALT--EWGQILSWGDNDCGQV 118
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH TDN+ ++L P+ + L T+V++ACG NH++A+ S G +Y+WG
Sbjct: 119 GHSTDND------VIEL-------PKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGS 165
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
YG+LG + KD +P + +L P A I+ G +S + ++ WGK
Sbjct: 166 NIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTC 223
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPY 367
N+ + YP L + +R + G+ + F+ + + G YG+LG+G
Sbjct: 224 GQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG-- 281
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 282 ASNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
P LR LV + V C + H +A+ G Y+WG N GQLG D + P
Sbjct: 130 PKILRFLVSRTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLR 187
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS 161
++ + + G +H+ ++++ +S FGW K+ GQLG +N PS ++ + +
Sbjct: 188 LTTILGIPLATIACGGNHSFLISK--SSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRT 245
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V CG +++V+L++ G AG YGQLGHG N + P
Sbjct: 246 LGVRFVTCGDEYSVFLTNEGGVFTCGAG--NYGQLGHGASNN--------------EMIP 289
Query: 221 RAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
R + L G TI +VACG HT+A V S G VY++G G G+LG R + +P+ V
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 31/320 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ Y G N+ QLGH ++ RP + EL Y + + G H++ +TE
Sbjct: 47 HTLFLTANGQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEW 104
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
G L++G N GQ+G + + IE P +R LVS V ACG + ++ L+S + +
Sbjct: 105 GQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSC--GELYS 162
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G YGQLG + + ++ P + + G + +ACG NH+ +
Sbjct: 163 WGSNIYGQLGVQSPKDLPHSNA-----------PLRLTTILGIPLATIACGGNHSFLISK 211
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V+ WG G+LG ++++ P ++ + V ++ G S G +
Sbjct: 212 SSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGV----RFVTCGDEYSVFLTNEGGV 267
Query: 307 YM-----WGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQ 358
+ +G+L + ++ M P+ +++L G + + GN H S S+G
Sbjct: 268 FTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGA 327
Query: 359 YGELGYGPYGQKSSAMPKKV 378
G+L G S +PK V
Sbjct: 328 SGQL--GTRNTISQTLPKVV 345
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 4/178 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G + + +P RL ++G+ + +A G H +
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACG--GNHSFLISKSSAV 215
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D+ R P+ + + ++ G ++V +T +G G +
Sbjct: 216 FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNY 275
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G+ NE+ P V L+ S +T ACG T+ L G + + GL GQLG
Sbjct: 276 GQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVP-SGGRVYSFGLGASGQLG 332
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 177/425 (41%), Gaps = 83/425 (19%)
Query: 29 CWDAVGRRKGALDGNLVSPTRLRPL---VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
W G G L G RL P DI V +G H +A+D G + WG N
Sbjct: 70 VWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSG--EAHSLALDEAGTVWAWGGN 127
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
GQLG G R P V+ L+ + AG H++ + DG A+G N HGQLG G
Sbjct: 128 SSGQLGDGTTTDRVTPMQVAGLTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRG 185
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ P PV L V A A G DFT L+ ++ ++ G GQLG GT +
Sbjct: 186 HTEPGLTPEPVPGL-EGVVALAAGFDFT--LAVMDDGTVRAWGANSSGQLGDGTFTQ--- 239
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+LA P +A ++G I V GT H VA+ G V+TWG G+LG
Sbjct: 240 -----RLA------PVEVAHISG--ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGA 286
Query: 266 QKDEWVPRRVDVFQRNNVLPPE-----AVISAGSVNSSCTAGGGQLYMWGK--------- 311
D VP RV +R + A++ AGSV + G GQL G
Sbjct: 287 WSDRAVPARVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEV 346
Query: 312 ------------------LKNNGDDWMY------------------PKPLMDLSGWNLRC 335
L+ +G W + P PL+ L+ ++
Sbjct: 347 PGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--DVAS 404
Query: 336 MDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
M +G+ H D + SWG YG+LG G ++ +A+ +V+ L G+ ++ A G+
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAV--RVEGLSGIRGVA-ASGH- 460
Query: 395 HSLVI 399
HSL +
Sbjct: 461 HSLAV 465
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 159/396 (40%), Gaps = 97/396 (24%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYK--IK 113
D+ VAAG VAV V G + WG NE GQLG G R P V E SK + ++
Sbjct: 1052 DVEAVAAG--EQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVR 1109
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA--- 170
A H V + DG A+G N HGQLG G+ P VR L + V A + GA
Sbjct: 1110 TVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGL-TGVVAVSTGAWHS 1168
Query: 171 -----DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
D TVW G +GQLG GT T P +A
Sbjct: 1169 LALRSDGTVWAWGANG----------FGQLGDGTTLSRTT--------------PVRVAG 1204
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD--------- 276
L + +V + G H +AV S G V+ WG+ +G+LG + +P RV+
Sbjct: 1205 L--QKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVTSVA 1262
Query: 277 ---------------------------------VFQRNNVLPPEAVIS--AGSVNSSCTA 301
+ R V + V+ AG+ ++
Sbjct: 1263 GGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALR 1322
Query: 302 GGGQLYMWGKLKNN----GDDW----MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G G ++ WG ++ GDD + P+P+ LSG + + +G H F VG +
Sbjct: 1323 GDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSG--VTAIGAGARHSFAVGPKGTVW 1380
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+WG +G+LG G + A P +V L + V+S
Sbjct: 1381 AWGRNSHGQLGLGDNANR--AEPLRVKELAEVSVVS 1414
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 40/342 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +R L GV VA + H +A+ +G + WG N GQLG G + R P V+
Sbjct: 1148 APVVVRGLTGV----VAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVA 1203
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L K + GAG H + V DG+ A+G+N GQLG G+ + + P V L S VT+
Sbjct: 1204 GLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGL-SNVTS 1260
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G + L+ + S+ G GQLG GT T+ S V + + +
Sbjct: 1261 VAGGDHHS--LALLADGSLGAWGNNAAGQLGDGTG---TTRYSRVWV--------KGV-- 1305
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNV 283
+ +V+V G HT+A+ G V+TWG + +LG + + VPR V
Sbjct: 1306 ---DGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVP------G 1356
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLRCMDSG 339
L I AG+ +S G ++ WG+ + GD+ +PL + + G
Sbjct: 1357 LSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVVSGG 1416
Query: 340 -NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ + D + SWG + +G LG G GQ+SS P +V +
Sbjct: 1417 ADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSS--PGQVAL 1456
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 54/345 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G + WG GQLGHG + P + L+ + AG H++ D
Sbjct: 361 HALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLAD--VASMAAGSFHSLAALGD 418
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTAT-----ACGADFTVWLSSVEG 181
G ++G N +GQLG G+ V L + V A+ A GAD TVW
Sbjct: 419 GTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNA 478
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
A GQLG G+ T+D + RP A++ L ++V VA G +HT
Sbjct: 479 A----------GQLGDGS-----TRD---------RARPVAVSGL--TSVVAVATGGSHT 512
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+ G V+ WG+ G+LG D P RV + ++V+ ++AG+ S
Sbjct: 513 MALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVA--RLDSVV----AVAAGTYFSMALR 566
Query: 302 GGGQLYMWGK------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
G G ++ WG+ G ++P + L+ N+ + +G+ H V D + +W
Sbjct: 567 GDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLT--NVTRVAAGSAHALAVRGDGTVWAW 624
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G+LG G + + P +V L G + +V+ G HS+ +
Sbjct: 625 GDNGEGQLGDGTWSDRFR--PVQVPGLTG--ITAVSGGRSHSMAL 665
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 159/392 (40%), Gaps = 76/392 (19%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ VAAG S H +AV +G + WG N GQLG G R RP V L+ I
Sbjct: 601 NVTRVAAG--SAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTG--ITAVS 656
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-------SEVTATACG 169
GRSH++ + DG+ A+G+N +GQLG G+ + + P+ V L S + A
Sbjct: 657 GGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHLHVLALH 716
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK-----------LAYEAQP 218
AD T + G ++GQLG G ++++ V+ A+
Sbjct: 717 ADGT----------LRGWGYNRFGQLGLGAAG-WSSRPVQVRGLGRVDRLAVGRAHTLMV 765
Query: 219 RPR-AIAAL----------------AGETIVK-------VACGTNHTVAVDSKGYVYTWG 254
RP A+ A AG +V+ VA G H++A+ G V+ WG
Sbjct: 766 RPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPCVRSVASGVLHSLALACDGSVWAWG 825
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G G+LG +P RVD Q + S + G + WG +
Sbjct: 826 ANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLAD------GTAWAWGANAH 879
Query: 315 N--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
GD D P L S N+ + G H G D + +WG G+LG G
Sbjct: 880 GQLGDGSTSDRAVPGQLKLPS--NIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGS- 936
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S P +V LEG V SV+ G SL +
Sbjct: 937 -TTPSPTPVRVKGLEG--VASVSAGRAFSLAV 965
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 151/350 (43%), Gaps = 36/350 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+I VA G H +A +G + WG N GQLG G P V L +
Sbjct: 901 NIMSVALG--ETHGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEG--VASVS 956
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AGR+ ++ V +DG + A+G N GQLG G+ ++ P V V V A + GA V L
Sbjct: 957 AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTS-VKRVRAMSAGAHHVVAL 1015
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
E ++ G GQLG GT S+ + PR + L + VA
Sbjct: 1016 G--EDGAVWTWGDNTLGQLGDGT--------SAPTWMW-----PRQVPEL--RDVEAVAA 1058
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G +VAV G + WG YG+LG + P +V + + + + P + A + +
Sbjct: 1059 GEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRI-EASKLRQPVRTVRAWAQH 1117
Query: 297 SSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
+ G + WG + GD P + L+G + + +G H + +D
Sbjct: 1118 AVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTG--VVAVSTGAWHSLALRSDG 1175
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +WG +G+LG G +++ P +V L+ V+++ G H+L +
Sbjct: 1176 TVWAWGANGFGQLGDGTTLSRTT--PVRVAGLQ--KVVAIGAGGYHALAV 1221
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 125/299 (41%), Gaps = 43/299 (14%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGS-GSIRNEIEPSPV---RCLVSEVTATACGADF 172
AG H++ V+ G A+G N GQLG + + P+P+ R +VS V+ A
Sbjct: 56 AGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAHS--- 112
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L+ E ++ G GQLG GT + T P +A L +V
Sbjct: 113 ---LALDEAGTVWAWGGNSSGQLGDGTTTDRVT--------------PMQVAGL--TDVV 153
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP-----E 287
VA G H++A+ G V+ WG +G+LG + P V + L
Sbjct: 154 AVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTL 213
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
AV+ G+V + GQL G + P + +SG + + +G H +G
Sbjct: 214 AVMDDGTVRAWGANSSGQLGD-GTFTQR----LAPVEVAHISG--ISAVTAGTYHAVALG 266
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D +WG G+LG G + + A+P +V LE V +VA SL +++ +V
Sbjct: 267 KDGGVWTWGANSSGQLGDGAWSDR--AVPARVPGLE--RVKAVASMDASSLALLEAGSV 321
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP---PEA 288
+++A G+ H++ V G V+ WG G+LG QR P P
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATP----------LQRLAPAPLPSPRD 101
Query: 289 VIS--AGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGN 340
++S +G +S G ++ WG + GD D + P + L+ ++ + +G+
Sbjct: 102 IVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLT--DVVAVAAGD 159
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + D + +WG +G+LG G + P+ V LEG V+++A G+ +L +
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGH--TEPGLTPEPVPGLEG--VVALAAGFDFTLAV 215
Query: 400 VDRTNV 405
+D V
Sbjct: 216 MDDGTV 221
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 43/363 (11%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ TR+ P+ I V+ G S H +A+ +G TWG+N GQLG G R P
Sbjct: 47 FLITTRI-PIFASTILQVSGG--SFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQ 103
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
V +L+ + G H+V +T DG +G N GQLG G+ ++ +P V L +
Sbjct: 104 VKDLN--NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL-KNI 160
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
TA A + L S ++ G YGQLG GT + NT + L
Sbjct: 161 TAIASKGLHNLALKS--DGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSL----------- 207
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
TI+ +A G H++A + G ++TWG YG+LG + +P V N
Sbjct: 208 -----NTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLV------NG 256
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMD 337
+ ++I G +S G +++WG ++ + D+ P P+ DL N+ +D
Sbjct: 257 IKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTID 314
Query: 338 SGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G H + +D + +WG+ + G+LG G S A P + L +V ++A G HS
Sbjct: 315 GGGDHSLILKSDGTVWTWGNNENGQLGDGT--TMSRATPIQASTLS--NVTAIASGEQHS 370
Query: 397 LVI 399
+ +
Sbjct: 371 IAL 373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 52/336 (15%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ +A G H VA+ +G +TWG N GQLG G R++P V+ L I
Sbjct: 109 NVTAIAGGA--WHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKN--ITAIA 164
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG------- 169
+ H + + DG +G N +GQLG G+ + P R L + ++ G
Sbjct: 165 SKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGGGYHSLAQK 224
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG- 228
AD T+W GL QYGQLG GT R I L
Sbjct: 225 ADGTIW----------TWGLNQYGQLGDGTITN------------------RTIPVLVNG 256
Query: 229 -ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ + + CG +H++ + + G ++ WGF +G+LG R + P V + N++
Sbjct: 257 IKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTP--VPMGDLKNIM--- 311
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I G +S G ++ WG +N +G P+ + N+ + SG H
Sbjct: 312 -TIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTLSNVTAIASGEQHS 370
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+ +D + +WG + G+LG G +S+ + K+
Sbjct: 371 IALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVKI 406
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P R+ L G I ++ G H V V +G Y+WG N QLG+G Q P
Sbjct: 60 SIIEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118
Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLV 160
VS L K G H++V+T DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 119 QVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ V ACG + ++ V+ + G GQLG G+ QP
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G + +V CG HT+A+ +G +Y WG YG+LG + ++ P +V
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278
Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
++ E ++ + +SS T+ GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 66/287 (22%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
GAG + + +T++ G N G LG+G ++ IEP + L + + + + G+ V
Sbjct: 28 GAG-NEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHV 86
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ + +G + + G Y QLG+G+ N +A + L + V
Sbjct: 87 VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAHSV 132
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++ + G VY WG+ G++G ++ +PR+V +N + I+ G
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
++S G++Y WG NG+
Sbjct: 190 MSSMAVVDNGEVYAWGY---NGN------------------------------------- 209
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G G + + P ++ L+G+ V V CGY H+L + D
Sbjct: 210 -----GQLGLGSSGNQPT--PCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ + V G H +A+ EG Y WG N GQLG G+K + P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
V + ++ A SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 54/189 (28%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
PR I L+G+ IV ++ G+ H V V S G VY+WG Y +LG+ P +V
Sbjct: 64 PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS-- 121
Query: 279 QRNNVLPPEA-VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N++ +A ++ GS +S G++Y
Sbjct: 122 --TNLINKKAHSVACGSHHSMVLTCDGEVY------------------------------ 149
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + +P+KV L+ VI +ACG S
Sbjct: 150 ---------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMSS 192
Query: 397 LVIVDRTNV 405
+ +VD V
Sbjct: 193 MAVVDNGEV 201
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 26/259 (10%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
R+ +G I V C H +A+ G Y+WG N GQLG G I+ + +P +++ L
Sbjct: 177 RMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTL 235
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
+ I G H++ +++ G +G N GQLG +N P ++ L ++V
Sbjct: 236 AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYA 295
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG +F+V+L+ G AG+ YGQLGHG++N + PR + L
Sbjct: 296 ACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNNN--------------EILPRQVMEL 339
Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
G T+ +++CG HT+A V S+G VY WG GG G+LG+ + P+ V R +
Sbjct: 340 MGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVV----RGPWVA 395
Query: 286 PE--AVISAGSVNSSCTAG 302
P +++ SSCT G
Sbjct: 396 PNGSSMMDFDKQFSSCTVG 414
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 149/328 (45%), Gaps = 39/328 (11%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + V + +G+ Y+ G N+ GQLGH R R ++ L + KKA G HT+
Sbjct: 88 ACGENYTVVITHDGKIYSCGNNDYGQLGHEQG--RKRLQLILGLDAFVFKKAACGAYHTI 145
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
V E G ++G N GQLG S +N +E SP V+ L S + ACG + L++
Sbjct: 146 AVNEWGQLFSWGSNSEGQLGLNS-KNFMECSPRMVKTLGTSIIVQIACGMKHALALTN-- 202
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G GQLG G D + +P+ I LAG I +ACG H
Sbjct: 203 NGELYSWGSNSEGQLGLGVD-------------IRCEMKPKLINTLAGVPIAFIACGGYH 249
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC- 299
++A+ G ++ WG +G+LG + ++ +P ++ RN + A SV +
Sbjct: 250 SIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTL-RNAKVCYAACGEEFSVFLTVD 308
Query: 300 ----TAGGGQLYMWGKL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
T G G M+G+L NN + + P+ +M+L G + + G H V +
Sbjct: 309 GGVFTCGAG---MYGQLGHGSNNNE--ILPRQVMELMGSTVTQISCGKRHTLALVPSQGR 363
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKV 378
+WG G+LG +S+ P+ V
Sbjct: 364 VYAWGLGGAGQLGNN--STRSTTTPQVV 389
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 80 YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG G+LG G D+I P V +I++ G ++TVV+T DG + G
Sbjct: 50 FCWGNTRHGELGLGGIEDEIIL-VPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGN 108
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACGADFTVWLSSVEGASILNAGLPQ 191
N +GQLG R ++ L+ + A ACGA T+ ++ E + + G
Sbjct: 109 NDYGQLGHEQGRKRLQ------LILGLDAFVFKKAACGAYHTIAVN--EWGQLFSWGSNS 160
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG + N + PR + L IV++ACG H +A+ + G +Y
Sbjct: 161 EGQLGLNSKNF-------------MECSPRMVKTLGTSIIVQIACGMKHALALTNNGELY 207
Query: 252 TWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+WG G+LG + + E P+ ++ P A I+ G +S + G ++ WG
Sbjct: 208 SWGSNSEGQLGLGVDIRCEMKPKLINTLAG----VPIAFIACGGYHSIAISKSGAIFGWG 263
Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELG 363
K N+ + P L L + G F+ D + G YG+LG
Sbjct: 264 KNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 323
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+G + +P++V L G V ++CG H+L +V
Sbjct: 324 HG--SNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L GV I F+A G H +A+ G + WG+N GQLG D R+ P +
Sbjct: 227 MKPKLINTLAGVPIAFIACG--GYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQL 284
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L K+ A G +V +T DG G +GQLG GS NEI P V L+ S V
Sbjct: 285 QTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTV 344
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
T +CG T+ L +G + GL GQLG+ +
Sbjct: 345 TQISCGKRHTLALVPSQG-RVYAWGLGGAGQLGNNS 379
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 20/230 (8%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
R+ +G I V C H +A+ G Y+WG N GQLG G I+ + +P +++ L
Sbjct: 161 RMVKTLGTSI-IVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTL 219
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
+ I G H++ +++ G +G N GQLG +N P ++ L +++
Sbjct: 220 AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYA 279
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG +F+V+L+ G AG+ YGQLGHG++N + PR + L
Sbjct: 280 ACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNNN--------------EILPRQVMEL 323
Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G T+ +++CG HT+A V S+G VY WG GG G+LG+ + P+ V
Sbjct: 324 MGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 37/313 (11%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + V + +G+ Y+ G N+ GQLGH R R ++ L + KK G HT+
Sbjct: 72 ACGENYTVVITHDGKIYSCGNNDYGQLGHERG--RKRLQLILGLDAFVFKKVACGAYHTI 129
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
V E G ++G N GQLG S +N +E SP V+ L S + ACG + L++
Sbjct: 130 AVNEWGQLFSWGSNSEGQLGLNS-KNFMECSPRMVKTLGTSIIVQVACGMKHALALTN-- 186
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G GQLG G D ++ +P+ I LAG I +ACG H
Sbjct: 187 NGELYSWGSNSEGQLGLGVD-------------IRSEVKPKLINTLAGVPIAFIACGGYH 233
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC- 299
++A+ G ++ WG +G+LG + ++ +P ++ RN + A SV +
Sbjct: 234 SIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTL-RNAKICYAACGEEFSVFLTVD 292
Query: 300 ----TAGGGQLYMWGKL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
T G G M+G+L NN + + P+ +M+L G + + G H V +
Sbjct: 293 GGVFTCGAG---MYGQLGHGSNNNE--ILPRQVMELMGSTVTQISCGKRHTLALVPSQGR 347
Query: 351 CISWGHAQYGELG 363
+WG G+LG
Sbjct: 348 VYAWGLGGAGQLG 360
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 44/341 (12%)
Query: 76 EGRCYTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+G + WG G+LG G D+I P V +I++ G ++TVV+T DG
Sbjct: 30 KGDMFCWGNTRHGELGLGGIEDEIIL-VPCQVDFKKASEIQQIACGENYTVVITHDGKIY 88
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACGADFTVWLSSVEGASILNA 187
+ G N +GQLG R ++ L+ + A ACGA T+ ++ E + +
Sbjct: 89 SCGNNDYGQLGHERGRKRLQ------LILGLDAFVFKKVACGAYHTIAVN--EWGQLFSW 140
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG + N + PR + L IV+VACG H +A+ +
Sbjct: 141 GSNSEGQLGLNSKNF-------------MECSPRMVKTLGTSIIVQVACGMKHALALTNN 187
Query: 248 GYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G +Y+WG G+LG + + E P+ ++ P A I+ G +S + G +
Sbjct: 188 GELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAG----VPIAFIACGGYHSIAISKSGAI 243
Query: 307 YMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQY 359
+ WGK N+ + P L L + G F+ D + G Y
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMY 303
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+LG+G + +P++V L G V ++CG H+L +V
Sbjct: 304 GQLGHG--SNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
V P + L GV I F+A G H +A+ G + WG+N GQLG D R+ P +
Sbjct: 211 VKPKLINTLAGVPIAFIACG--GYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQL 268
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L KI A G +V +T DG G +GQLG GS NEI P V L+ S V
Sbjct: 269 QTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTV 328
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
T +CG T+ L +G + GL GQLG+ +
Sbjct: 329 TQISCGKRHTLALVPSQG-RVYAWGLGGAGQLGNNS 363
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 34/275 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
++ V C H +A+ +GR ++WG N GQLG G + +P ++ L+ + A
Sbjct: 139 LQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
G SH+ V+++ G FG N GQLG G + P+ V+ L S +VT +CG + T L
Sbjct: 199 GGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ G AG YGQLGH ++N + PR + L G + ++AC
Sbjct: 259 TLDGGVLTFGAG--SYGQLGHNSNNH--------------EALPRKVFELMGLEVTQLAC 302
Query: 237 GTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD----VFQRNNVLPPEAVIS 291
G HT+A V+S G +Y++G GG G+LG + + P VD F +N L +
Sbjct: 303 GRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCY-- 360
Query: 292 AGSVNSSCTAGGGQLY-MWGKLKNNGDDWMYPKPL 325
V + TAGG Q + + KL+ PKPL
Sbjct: 361 ---VVQAITAGGDQAFALASKLQGT------PKPL 386
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 31/262 (11%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G + CGS + +G+ KG PT + L I+ V+ G H + V+ + +
Sbjct: 53 GTVYTCGSNDYGQLGQDKGH-----KRPTVITALDTQSIQQVSCG--DYHNLVVNDKYQV 105
Query: 80 YTWGRNERGQLGHGDKI---QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
++WG ++ GQLGH + RP +V ELS +I + G H++ ++ DG ++G
Sbjct: 106 FSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGN 165
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N HGQLG GS +N+ +P + L G + LS + ++ G +GQL
Sbjct: 166 NSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLS--KSGAVFGFGRNTFGQL 223
Query: 196 GHGT--DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
G G D +Y P + +L + ++CG HT + G V T+
Sbjct: 224 GLGDTGDRKY----------------PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTF 267
Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
G G YG+LGH E +PR+V
Sbjct: 268 GAGSYGQLGHNSNNHEALPRKV 289
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 148/334 (44%), Gaps = 35/334 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSEL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG G+LG G I+ D E + +++ GR HTV V +G G
Sbjct: 2 FCWGAARNGELGLGG-IEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N +GQLG + P+ + L ++ + +CG + ++ + + + G GQL
Sbjct: 61 NDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVN--DKYQVFSWGYDDCGQL 116
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH + N RPR + L+ IV+VACG H++A+ + G +++WG
Sbjct: 117 GHTLEAGGNNSR-----------RPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGN 165
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---- 311
+G+LG K++ P+ + P I AG +S + G ++ +G+
Sbjct: 166 NSHGQLGIGSTKNQPKPQELTSLTG----IPFCQIVAGGSHSFVLSKSGAVFGFGRNTFG 221
Query: 312 ---LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPY 367
L + GD YP + L + + G H V D +++G YG+LG+
Sbjct: 222 QLGLGDTGDR-KYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHN-- 278
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
A+P+KV L G+ V +ACG H++ V+
Sbjct: 279 SNNHEALPRKVFELMGLEVTQLACGRMHTMAYVE 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC H V V EG YT G N+ GQLG DK + RPT+++ L I++ G H
Sbjct: 39 VSCGRQHTVFVLAEGTVYTCGSNDYGQLGQ-DKGHK-RPTVITALDTQSIQQVSCGDYHN 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSS 178
+VV + ++G++ GQLG N P V+ L S ++ ACG ++ LS+
Sbjct: 97 LVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSN 156
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
I + G +GQLG G+ TK+ QP+P+ + +L G ++ G
Sbjct: 157 --DGRIFSWGNNSHGQLGIGS-----TKN---------QPKPQELTSLTGIPFCQIVAGG 200
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
+H+ + G V+ +G +G+LG + D P V + V IS G +++
Sbjct: 201 SHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKV----THISCGEEHTA 256
Query: 299 C-TAGGGQLYM----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHFVGADSS-- 350
T GG L +G+L +N ++ P+ + +L G + + G MH +SS
Sbjct: 257 VLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGR 316
Query: 351 CISWGHAQYGELG 363
S+G G+LG
Sbjct: 317 IYSFGLGGNGQLG 329
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCSGCLGLGDAQ---STIEPRRLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSG N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GSGGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLA 133
V + G N G LG GD P + LS KI G H V+ T +G
Sbjct: 63 VNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G N + QLG+G+ + + P + +S +V ACG+ ++ L+S + G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS--DGEVFAWGYNN 180
Query: 192 YGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGY 249
GQ+G G T N QP PR + L + +V +ACG ++AV G
Sbjct: 181 SGQVGSGPTAN---------------QPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGE 225
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VY WG+ G G+LG ++ P RV Q V ++ G ++ GQ+Y W
Sbjct: 226 VYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRV----QRVACGYAHTLVLTDEGQVYAW 281
Query: 310 -----GKL-KNNGDDWMYPKPLM 326
G+L N + YP P++
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVV 304
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 27/263 (10%)
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASI 184
T + G N G LG G ++ IEP + L ++ + G+ V L++ EG +
Sbjct: 62 TVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEG-EV 120
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVA 243
G Y QLG+GT N P I+ L+ + +++VACG+ H++
Sbjct: 121 FTWGHNAYSQLGNGTTNH--------------GLVPCQISTNLSNKQVIEVACGSYHSLV 166
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ S G V+ WG+ G++G ++ +PRRV +N V+ I+ G + S
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVV---VNIACGQMCSMAVVDT 223
Query: 304 GQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGH 356
G++Y+WG N +G + P + L G ++ + G H V D +WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
YG+LG G +S P V+
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVVE 306
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 2704 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 2763
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 2764 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 2823
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 2824 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 2876
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 2877 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 2929
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 2930 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 2985
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 2986 G------LDAVFVNRVACGSSHSIAWG 3006
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 2672 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 2723
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 2724 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 2783
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 2784 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------TTQLKPKLVT 2827
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 2828 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 2887
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 2888 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 2943
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 2944 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3001
Query: 396 SL 397
S+
Sbjct: 3002 SI 3003
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 2638 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 2695
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P + L V + A G + L +++G + + G
Sbjct: 2696 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 2753
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 2754 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 2799
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 2800 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 2855
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 2856 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 2915
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 2916 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2959
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 273 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 332
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 333 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 392
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 393 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 436
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+VA+ S+G +YTWG LGH R + VPR V Q ++ ++
Sbjct: 437 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 490
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 491 HCLALSSSGEVFGWGR 506
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A + + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 256 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 313
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P ++
Sbjct: 314 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 369
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 370 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 411
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P R+ L G I ++ G H V V +G Y+WG N QLG+G Q P
Sbjct: 60 SIIEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118
Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLV 160
VS L K G H++V+T DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ V ACG + ++ V+ + G GQLG G+ QP
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G + +V CG HT+A+ +G +Y WG YG+LG + ++ P +V
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278
Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
++ E ++ + +SS T+ GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 66/287 (22%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
GAG + + +T++ G N G LG+G ++ IEP + L + + + + G+ V
Sbjct: 28 GAG-NEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHV 86
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ + +G + + G Y QLG+G+ N +A + L + + V
Sbjct: 87 VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAISV 132
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++ + G VY WG+ G++G ++ +PR+V +N + I+ G
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
++S G++Y WG NG+
Sbjct: 190 MSSMAVVDNGEVYAWGY---NGN------------------------------------- 209
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G G + + P ++ L+G+ V V CGY H+L + D
Sbjct: 210 -----GQLGLGSSGNQPT--PCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 54/189 (28%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
PR I L+G+ IV ++ G+ H V V S G VY+WG Y +LG+ P +V
Sbjct: 64 PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS-- 121
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N++ +A+ ++ GS +S G++Y
Sbjct: 122 --TNLINKKAISVACGSHHSMVLTCDGEVY------------------------------ 149
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + +P+KV L+ VI +ACG S
Sbjct: 150 ---------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMSS 192
Query: 397 LVIVDRTNV 405
+ +VD V
Sbjct: 193 MAVVDNGEV 201
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ + V G H +A+ EG Y WG N GQLG G+K + P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
V + ++ A SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 152/391 (38%), Gaps = 95/391 (24%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ SP + L ++ V+AG + VA G Y WG N GQLG GD+ P +
Sbjct: 1 MASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPRL 58
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSIR 148
V L +K + HTV +DG++ A+G +G+LG S +
Sbjct: 59 VKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATG 118
Query: 149 NEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQL 195
EP C V + ACG + +L E S+ GL G+L
Sbjct: 119 ARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRL 178
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG + + + P A+ AL I +ACG +HT V S G +YTWG
Sbjct: 179 GHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 224
Query: 256 GGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+G+LG + + +P+ V RN + ++ GS +S+C G+LY WG+ +
Sbjct: 225 AAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQGRR 281
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
GH GE +
Sbjct: 282 ---------------------------------------LGHEVQGE--------SDEIL 294
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P++V+ L G+ VI V CG H+ IV+ NV
Sbjct: 295 PRRVEALLGLFVIHVVCGDAHTACIVENGNV 325
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P R+ L G I ++ G H +G ++WG N QLG+G P +V
Sbjct: 63 IEPRRIDVLCGKKIVSLSYG-TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
S L ++ + G HT+ +T DG A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 122 STNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179
Query: 161 SEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++V ACG + ++ ++ I G GQLG G + Q
Sbjct: 180 NKVVVNIACGQLCS--MAVLDSGEIYGWGYNCNGQLGLGNNGN--------------QQT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G +++VACG HT+A+ +G+VY+WG YG+LG + ++ VP ++ +
Sbjct: 224 PCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINTEK 283
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
E S S+ GQ+ MWG+ +
Sbjct: 284 ER---MSEVAACHTSHTSAAKTQSGQVLMWGQCR 314
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 67/288 (23%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VT + A G N G LG G +++ IEP + L ++ + + G V
Sbjct: 28 GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ +G + + G Y QLG+GT T P ++ L G+ +++
Sbjct: 88 AIATADG-EVFSWGHNGYSQLGNGTSTHGLT--------------PALVSTNLLGKRVIE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++HT+A+ + G V+ WG+ G++G ++ PRRV +N V+
Sbjct: 133 VACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV--------- 183
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
VN +C GQL ++ +DSG ++
Sbjct: 184 -VNIAC----GQL------------------------CSMAVLDSGEIY----------G 204
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
WG+ G+LG G G + + P ++ L+G++VI VACGY H++ + D
Sbjct: 205 WGYNCNGQLGLGNNGNQQT--PCRIAALQGVNVIQVACGYAHTIALTD 250
>gi|393214209|gb|EJC99702.1| RCC1/BLIP-II [Fomitiporia mediterranea MF3/22]
Length = 472
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 156/350 (44%), Gaps = 34/350 (9%)
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
+R P ++ A GRSHT++V +G+ G N GQ G + + P
Sbjct: 19 RRLTPQMLGASKGVTFVHAAVGRSHTLLVGSNGDVWTAGANSLGQCG----QPQCPEVPT 74
Query: 157 RCLV---------SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
L+ ++ G +F++ L+ E + G ++GQLG+G E+
Sbjct: 75 FTLIRGPWPNGEKEKIVKVGAGINFSMLLT--ESGKLYALGSGEHGQLGNGRTGEHIATG 132
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
+ K ++ P + L G+ I +++CG H++A+D G VY WG+ GY RLG Q+
Sbjct: 133 N--KTMFDVFSTPVLVKGLEGKHITQISCGHQHSIALDKDGIVYVWGYNGYCRLGLGNQQ 190
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYP 322
D VP+ V F N + ++AG NS YM GK KN+G+ +
Sbjct: 191 DVLVPKAVPQFSGPNEISRGVFVAAGPSNSIVIDRQKMYYMAGKWKNSGEGSSGSPYSSF 250
Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADSS--------CISWG-HAQYGELGYGPYGQKSSA 373
+ + DL G + SG + HF A +++G +A ELG+G KS+
Sbjct: 251 RYIQDLMGCKIYRACSGGVTHFALAPDEEATDGGVMTVAFGQNAANWELGFGASEPKSAT 310
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQD 423
P + +L G+ VI +A +L + R N E+L L + + S D
Sbjct: 311 KPTRHQLLIGIDVIDIAASQNTTLFLA-RPN--EKLSDLPRHPVEVDSPD 357
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 170/396 (42%), Gaps = 49/396 (12%)
Query: 23 LFCGST--CWDAVGRRKGALDGNLVSPTRLRPL---VGVDIRFVAAGCVSCHCVAVDVEG 77
LF T W G G L G S RL P V DI V +G H +A+ +G
Sbjct: 79 LFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSVVSG--DAHSLALGADG 136
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+TWG N GQLG G R P V + + AG H++V+ DG A+G N
Sbjct: 137 TVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTN 194
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
HGQLG G + + P PV L V A A G DFT L+ ++ + G +GQLG
Sbjct: 195 FHGQLGQGHTQTGLWPKPVPGL-EGVVALAAGFDFT--LAVHADGAVSSWGANSFGQLGL 251
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT + + P I L+G I VA GT H VA+ G V+TWG
Sbjct: 252 GT--------------FTQRLSPERIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSNS 295
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG D VP + + A + AGS+ GG + WG N+G
Sbjct: 296 SGQLGDGTWNDRAVPAPLPGVGGARAV---ASLDAGSL---ALLEGGDVLAWGA-NNSGQ 348
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
D P + +LS + + G H + D + +WG G+LG+G G
Sbjct: 349 LGDGDTADRSTPSLVPELS--AVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHG--GS 404
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ +P V L +V S+A G HSL ++ +V
Sbjct: 405 ERHVVPATVMGLT--NVTSMATGSFHSLAALEDGSV 438
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VAA H +AV ++G +TWGRN GQLG G R RP VS L+ + A
Sbjct: 469 VRAVAA--AGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAA 524
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G SH + + DG+ A+G+N GQLG G+ +++ P V L + + + A G F++ L+
Sbjct: 525 GGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGL-APIQSVAAGTYFSMALA 583
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ ++ G GQLG G + + P A+ L+ I ++ G
Sbjct: 584 N--DGTVWTWGEGFEGQLGDGGGVQ--------------RLSPVAVKGLS--DIRNISVG 625
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+ H +AV G V+ WG G+LG D + P +V RN L +S G +S
Sbjct: 626 SAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQV----RN--LTGITAVSGGRSHS 679
Query: 298 SCTAGGGQLYMWGK--LKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
G + WG GD + P + LSG ++ + G++H + AD +
Sbjct: 680 LALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSG--IQALHPGHLHVLALHADKT 737
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG+ ++G+LG G G SA P +V + V +A G H+L++
Sbjct: 738 LRGWGYNRFGQLGLGAAGW--SARPVQVRGIG--RVERLAAGRAHALLV 782
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 153/345 (44%), Gaps = 54/345 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G + WG GQLGHG + P V L+ + G H++ ED
Sbjct: 378 HALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTN--VTSMATGSFHSLAALED 435
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------ADFTVWLSSVEG 181
G+ A+G N +GQLG G++ P V L S A G D TVW
Sbjct: 436 GSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVW------ 489
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
G GQLG GT T+D + RP A++ L +++ +A G +H
Sbjct: 490 ----TWGRNAAGQLGDGT-----TRD---------RARPVAVSGL--TSVLAIAAGGSHV 529
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+ S G V+ WG+ G+LG D+ P RV L P ++AG+ S A
Sbjct: 530 LALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVP------GLAPIQSVAAGTYFSMALA 583
Query: 302 GGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
G ++ W G+L + G + P + LS ++R + G+ H V D + +W
Sbjct: 584 NDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLS--DIRNISVGSAHALAVRGDGTVWAW 641
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G+LG G + + + P +V L G + +V+ G HSL +
Sbjct: 642 GDNNEGQLGDGSWMDRFA--PVQVRNLTG--ITAVSGGRSHSLAL 682
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 153/363 (42%), Gaps = 52/363 (14%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H +A +G + WGRN GQLG G +R P V L ++ A H++ V
Sbjct: 426 SFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS--VRAVAAAGHHSIAVA 483
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
DG +G N GQLG G+ R+ P V L S V A A G + L S +
Sbjct: 484 MDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTS-VLAIAAGGSHVLALRS--DGDVWA 540
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQLG GT + T P + LA I VA GT ++A+ +
Sbjct: 541 WGYNALGQLGDGTSGDKLT--------------PVRVPGLA--PIQSVAAGTYFSMALAN 584
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ--RNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G G+LG P V RN IS GS ++ G G
Sbjct: 585 DGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSDIRN--------ISVGSAHALAVRGDG 636
Query: 305 QLYMWGKLKNN----GD-DWM---YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
++ WG NN GD WM P + +L+G + + G H + AD + +WG
Sbjct: 637 TVWAWG--DNNEGQLGDGSWMDRFAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWG 692
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VDRTNVG---ERLDQ 411
YG+LG G S +P + L G+ + G+ H L + D+T G R Q
Sbjct: 693 SNGYGQLGDGTL--TSRVLPSVIPGLSGIQALH--PGHLHVLALHADKTLRGWGYNRFGQ 748
Query: 412 LDV 414
L +
Sbjct: 749 LGL 751
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 147/339 (43%), Gaps = 42/339 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V G H VA+ +G WG N GQLG G +R P + +++ GA
Sbjct: 1124 VVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGA-- 1181
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H++ + DG A+G N GQLG G+ P PV+ L +V A A G +V + S
Sbjct: 1182 WHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGL-RDVVAIAAGGYHSVAVRS- 1239
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G +GQLG GT E++ P + L E + V G +
Sbjct: 1240 -DGTVWTWGYNTFGQLGDGTS--------------ESRALPVQVHKL--EGVQAVTGGDH 1282
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSS 298
H++A+ + G V WG G+LG + D + P R+ DV V AG+ ++
Sbjct: 1283 HSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEV-------RAGAAHTV 1335
Query: 299 CTAGGGQLYMWGKLKNN--GDDW------MYPKPLMDLSGWNLRCMDSGNMHHFV-GADS 349
G ++ WG + GD + PKP+ L + +G H F G +
Sbjct: 1336 ALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPA--ATAIGAGAWHSFASGPEE 1393
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+WG +G+LG G + A P+++ +L G+ VI+
Sbjct: 1394 GAFTWGRNSHGQLGVGDNAPR--AEPQRMKLLSGLKVIA 1430
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 157/373 (42%), Gaps = 60/373 (16%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P R+ L D+ VAAG VAV +G ++WG NE GQLG G R P
Sbjct: 1057 TVMWPQRVAELS--DVESVAAG--EQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPA 1112
Query: 103 IVSELSKYK---IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
V ++ K + GA H V + DG A+G N GQLG G+ P +R
Sbjct: 1113 EV-KIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRG- 1170
Query: 160 VSEVTATACGA--------DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
V+ VTA + GA D TVW G +GQLG GT
Sbjct: 1171 VTRVTAVSTGAWHSLALRLDGTVWAWGANG----------FGQLGDGTTT---------- 1210
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
A+ P + L +V +A G H+VAV S G V+TWG+ +G+LG + +
Sbjct: 1211 ----ARAVPVPVQGL--RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRAL 1264
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPL 325
P +V + ++ G +S G + WG + GD D P L
Sbjct: 1265 PVQVHKLEGVQ------AVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRL 1318
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D+ G L + +G H +G D + +WG +G+LG G G + +PK V L
Sbjct: 1319 KDVDG--LTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPA- 1375
Query: 385 HVISVACGYGHSL 397
++ G HS
Sbjct: 1376 -ATAIGAGAWHSF 1387
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 151/350 (43%), Gaps = 39/350 (11%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R VA+G H + + +G +TWG N+RGQLG G R P V L + AG G
Sbjct: 820 RSVASG--GQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGI-VAVAGGG 876
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
+ ++ + DG A+G N GQ+G G++ + + P + L S+V A G L+
Sbjct: 877 DT-SLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEAL-SDVMVIALGESHA--LAV 932
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E ++ G GQLG G + P + L E + VA G
Sbjct: 933 GEDGTVWAWGANASGQLGDGGETP--------------SLLPARVKGL--EGVGSVAAGR 976
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
++AV G + WG G+LG + VP RV + +SAG+ ++
Sbjct: 977 AFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRA------VSAGAHHAM 1030
Query: 299 CTAGGGQLYMWG--KLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
G ++ WG L GD M+P+ + +LS ++ + +G V D +
Sbjct: 1031 ALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DVESVAAGEQFSVAVAHDGT 1088
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
SWG +YG+LG G G + S K+ + V++V H++ ++
Sbjct: 1089 AFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALM 1138
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 154/337 (45%), Gaps = 38/337 (11%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H +A+ + WG N GQLG G RP V + + +++ AGR+H ++V
Sbjct: 727 LHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGR--VERLAAGRAHALLVRA 784
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG+ +A+G N GQLG G + VR VS + A G ++ L+ ++
Sbjct: 785 DGSVVAWGANASGQLGDGGTTHGARAVTVRG-VSCARSVASGGQHSLVLAC--DGTVWTW 841
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G Q GQLG GT + A+ P + L E IV VA G + ++A+ S
Sbjct: 842 GENQRGQLGDGTTS--------------ARVAPGRVEGL--EGIVAVAGGGDTSLALRSD 885
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+ WG G++G +D PRR++ ++V+ VI+ G ++ G ++
Sbjct: 886 GTVWAWGANASGQVGDGTVEDRLTPRRIEAL--SDVM----VIALGESHALAVGEDGTVW 939
Query: 308 MW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
W G+L + G+ + P + L G + + +G V D + +WG + G
Sbjct: 940 AWGANASGQLGDGGETPSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANESG 997
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+LG G +S +P +V ++G+ +S + +L
Sbjct: 998 QLGDGS--NQSRRVPHRVASVKGLRAVSAGAHHAMAL 1032
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 145/340 (42%), Gaps = 40/340 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP +R + R A + H +A+ ++G + WG N GQLG G R P V
Sbjct: 1164 SPGEIRGVT----RVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQ 1219
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L + AG H+V V DG +G+N GQLG G+ +E PV+ E
Sbjct: 1220 GL--RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGT--SESRALPVQVHKLEGVQ 1275
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G D +G ++ G GQLG G+ + T P +
Sbjct: 1276 AVTGGDHHSLALHADG-TVSGWGHNASGQLGDGSRTDRYT--------------PVRLKD 1320
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ G T V+ G HTVA+ G V+TWG +G+LG PR V + + LP
Sbjct: 1321 VDGLTEVR--AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTG----PRMRLVPKPVSGLP 1374
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSG 339
I AG+ +S + + WG+ + GD+ +P + LSG L+ + G
Sbjct: 1375 AATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSG--LKVIAGG 1432
Query: 340 -NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+ + + +SWG + +G LG G GQ++S P +V
Sbjct: 1433 ADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRAS--PGRV 1470
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 52/288 (18%)
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---- 158
+ LS +I AG H++ +T G A+G N GQLG G+ + SP R
Sbjct: 62 LAEPLSPMRIA---AGAQHSLFLTPTGAVWAWGGNSAGQLG-GADTSFQRLSPARLPVLE 117
Query: 159 -LVSEVT----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+VS V+ + A GAD TVW G GQLG GT +
Sbjct: 118 DIVSVVSGDAHSLALGADGTVW----------TWGSNSSGQLGDGTTTD----------- 156
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+ P+ + +V VA G H++ + S G V+ WG +G+LG + P+
Sbjct: 157 ---RAEPQRVEGF--TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPK 211
Query: 274 RVDVFQRNNVLPP-----EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
V + L AV + G+V+S GQL + G + P+ + L
Sbjct: 212 PVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGL-GTFTQR----LSPERIPTL 266
Query: 329 SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
SG + + +G H +G D + +WG G+LG G + ++ P
Sbjct: 267 SG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP 312
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN-----VLPP 286
+++A G H++ + G V+ WG G+LG + FQR + VL
Sbjct: 69 MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTS----------FQRLSPARLPVLED 118
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGN 340
+ +G +S G ++ WG + GD D P+ + + ++ + +G+
Sbjct: 119 IVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFT--DVVAVAAGD 176
Query: 341 MHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H V +D + +WG +G+LG G ++ PK V LEG V+++A G+ +L +
Sbjct: 177 FHSLVLKSDGTVWAWGTNFHGQLGQGH--TQTGLWPKPVPGLEG--VVALAAGFDFTLAV 232
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 36/334 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFG 135
Y WG GQLG G I+ ++ + S++ ++K +++ G HT+ +T +G A G
Sbjct: 4 YCWGDASHGQLGLGG-IENEQILLPSQI-EFKPDSPVQQIACGHRHTLFLTANGQVYACG 61
Query: 136 WNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N H QLG P P ++ V V ACG+ ++ L+ E IL+ G GQ
Sbjct: 62 NNDHHQLGHELPTKRPLPIPELQAYV--VIQIACGSRHSMALT--EWGQILSWGDNDCGQ 117
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+GH TDN+ ++L P+ + L T+V++ACG NH++A+ S G +Y+WG
Sbjct: 118 VGHSTDND------VIEL-------PKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG 164
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + KD +P + +L P A I+ G +S + ++ WGK
Sbjct: 165 SNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222
Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
N+ + YP L + +R + G+ + F+ + + G YG+LG+G
Sbjct: 223 CGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGV 282
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 283 --SNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
P LR LV + V C + H +A+ G Y+WG N GQLG D + P
Sbjct: 130 PKILRFLVSRTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLR 187
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS 161
++ + + G +H+ ++++ +S FGW K+ GQLG +N PS ++ + +
Sbjct: 188 LTTILGIPLATIACGGNHSFLISK--SSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRT 245
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V CG +++V+L++ G AG YGQLGHG N + P
Sbjct: 246 LGVRFVTCGDEYSVFLTNEGGVFTCGAG--NYGQLGHGVSNN--------------EMIP 289
Query: 221 RAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
R + L G TI +VACG HT+A V S G VY++G G G+LG R + +P+ V
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 4/178 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G + + +P RL ++G+ + +A G H +
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACG--GNHSFLISKSSAV 215
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D+ R P+ + + ++ G ++V +T +G G +
Sbjct: 216 FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNY 275
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G NE+ P V L+ S +T ACG T+ L G + + GL GQLG
Sbjct: 276 GQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVP-SGGRVYSFGLGASGQLG 332
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 163/354 (46%), Gaps = 31/354 (8%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D + V C S H V + +G+ YTWGR + G+LGHGD + P +V +L K+++
Sbjct: 33 DRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVT 92
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HT VT G +G +G+LG G+ PS V + V ACG+ TV
Sbjct: 93 CGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVV 152
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV- 234
L +E + G + G GHG + + Q P ++ L I ++
Sbjct: 153 L--LENQDVYTWGDKENGVSGHGDTSGH-------------QYSPYCVSELVEINIKQIS 197
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG HT A+ G V+T+G G +GRLGH ++++ V + +D + ++ G
Sbjct: 198 ACGF-HTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQ----VACGG 252
Query: 295 VNSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+++ G ++ WG ++ +GD + + P + L N+ + G H D
Sbjct: 253 FHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTD 312
Query: 349 S-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG+ +G+LG+ + + PK ++ VISVA H++ +V+
Sbjct: 313 KGEVFTWGNGDHGKLGHNDTNKVTE--PKLIETFNSKRVISVASYNEHTVALVN 364
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 31/335 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWGR E GQLG GD + P +V L + + G HTVV+T+DG +G
Sbjct: 4 YTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDD 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G + P V L +V CG+ T + +V G + G YG+LGHG
Sbjct: 64 GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAV-TVSG-ELYTWGGGMYGKLGHG 121
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+N ++T P + ++ G + +VACG+ HTV + VYTWG
Sbjct: 122 NENGHST--------------PSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKEN 167
Query: 259 GRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G GH + ++ P V N+ ISA +++ + GQ++ +G+ K
Sbjct: 168 GVSGHGDTSGHQYSPYCVSELVEINIKQ----ISACGFHTAALSENGQVFTFGEGKFGRL 223
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
N+ + K + L G ++ + G H +S +WG ++G+LG+G +
Sbjct: 224 GHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGD--KV 281
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ +P +V+ L ++I + CG+ H++ + D+ V
Sbjct: 282 NQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEV 316
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G+ SP + LV ++I+ ++A H A+ G+ +T+G + G+LGH +
Sbjct: 173 GDTSGHQYSPYCVSELVEINIKQISA--CGFHTAALSENGQVFTFGEGKFGRLGHNSERN 230
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
+ + L +IK+ G HT VTE G+ +G +HGQLG G N+I P+ V
Sbjct: 231 QPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVE 290
Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ + + CG TV L+ + + G +G+LGH N+
Sbjct: 291 SLIDKNIIQLTCGWSHTVALT--DKGEVFTWGNGDHGKLGHNDTNKVT------------ 336
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
P+ I + ++ VA HTVA+
Sbjct: 337 --EPKLIETFNSKRVISVASYNEHTVAL 362
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG G G+LG + D++ P V+ Q + IS GS ++ G++Y W
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQ----ISCGSGHTVVLTDDGKVYTW 58
Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
G+L + + W + P+ + DL +R + G+ H V +WG YG+L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G + + P V+ ++G++V VACG H++V+++ +V
Sbjct: 119 GHG--NENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDV 159
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N + PTR+ L+ D + C H VA+ +G +TWG + G+LGH D + P
Sbjct: 282 NQIIPTRVESLI--DKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPK 339
Query: 103 IVSELSKYKIKKAGAGRSHTV-VVTEDGN 130
++ + ++ + HTV +V D N
Sbjct: 340 LIETFNSKRVISVASYNEHTVALVNPDAN 368
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
++ N+ +P + L G ++ VA C H A+ G+ YTWG E G+LGHGD++++
Sbjct: 76 SVTANVSTPALVSALQGKHVKQVA--CGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQ 133
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR- 157
P +V L ++ AG H+ V+ E GN L +G GQLG G + P V+
Sbjct: 134 ASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKG 193
Query: 158 ---CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
C+ EV ACG T+ L+ + + G ++G+LG G +
Sbjct: 194 VQQCIAHEV---ACGTHHTLMLTQSQ--EVWTWGSGEFGKLGIGDE-------------- 234
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E P I AL G ++ ++ G H+ A+ S+G +YTWG G G+LGH ++ + +P
Sbjct: 235 EKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVV 294
Query: 275 VDVF 278
V+V
Sbjct: 295 VEVI 298
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 32/312 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG+ GQLGHGD+ + +P +V + +++ G HT ++ E+G FG
Sbjct: 9 YSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNF 68
Query: 140 GQLGSGS--IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G+ N P+ V L + V ACG T L ++ + G +YG+LG
Sbjct: 69 GQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCAL--IDNGQLYTWGSGEYGRLG 126
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Q P+ + +L G+ + VA G H+ + G + TWG G
Sbjct: 127 HGDEVR--------------QASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGG 172
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN- 315
+G+LGH ++ D P+ V Q+ + E ++ G+ ++ +++ WG +
Sbjct: 173 YFGQLGHGDETDRKTPKMVKGVQQ--CIAHE--VACGTHHTLMLTQSQEVWTWGSGEFGK 228
Query: 316 ---GDDWMYPKPLM--DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
GD+ + +P+M L G + + +G H + ++ +WG G+LG+G +
Sbjct: 229 LGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGD--E 286
Query: 370 KSSAMPKKVDIL 381
S +P V+++
Sbjct: 287 NSQNIPVVVEVI 298
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
P + +G ++R V+ C + H + G +T+GR GQLG G + + P +V
Sbjct: 30 PRLVVAFLGFNVRQVS--CGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALV 87
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
S L +K+ G HT + ++G +G ++G+LG G + P V L EV
Sbjct: 88 SALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEV 147
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
T A G + + +EG ++L G +GQLGHG + + T P+ +
Sbjct: 148 TFVAAGGFHSSVI--IEGGNLLTWGGGYFGQLGHGDETDRKT--------------PKMV 191
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ +VACGT+HT+ + V+TWG G +G+LG +++ P + Q V
Sbjct: 192 KGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGV 251
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ IS G +S+ G LY WG
Sbjct: 252 IH----ISTGGFHSAALTSEGVLYTWG 274
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG G + + +P V + V +CG T L +E + G +GQLG G
Sbjct: 17 GQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL--MENGEVFTFGRGNFGQLGQG 74
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P ++AL G+ + +VACG +HT A+ G +YTWG G Y
Sbjct: 75 ASVTANVST------------PALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEY 122
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKN 314
GRLGH ++ + P+ V+ Q V ++AG +SS GG L WG
Sbjct: 123 GRLGHGDEVRQASPKLVESLQGKEV----TFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178
Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS 371
+GD D PK + + + G H + S + +WG ++G+LG G ++
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGD--EEK 236
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
A P + L+G+ VI ++ G HS +
Sbjct: 237 HAEPIMITALQGVGVIHISTGGFHSAAL 264
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 69/231 (29%)
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S EG+ + + G GQLGHG + + Q +PR + A G + +V+CG
Sbjct: 2 SREGSEVYSWGQGVLGQLGHGDE--------------KTQRQPRLVVAFLGFNVRQVSCG 47
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT + G V+T+G G +G+LG NV P A++SA
Sbjct: 48 NQHTAILMENGEVFTFGRGNFGQLGQGASVTA------------NVSTP-ALVSA----- 89
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS-GWNLRC--MDSGNMHHFVGADSSCISW 354
+ K + ++ GW+ C +D+G ++ +W
Sbjct: 90 ----------------------LQGKHVKQVACGWHHTCALIDNGQLY----------TW 117
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G +YG LG+G +++S PK V+ L+G V VA G HS VI++ N+
Sbjct: 118 GSGEYGRLGHGDEVRQAS--PKLVESLQGKEVTFVAAGGFHSSVIIEGGNL 166
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 156/338 (46%), Gaps = 44/338 (13%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + +++ G HT+ +T +G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSN 67
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
H QLG +E+ P+ L+ E V +CG+ ++ LS E +L+ G
Sbjct: 68 DHSQLG-----HEL-PTKRPLLIPELQDYVVIQISCGSRHSLALS--EWGQVLSWGDNDC 119
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGH TD E V+L P+ + L +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
WG YG+LG KD P R+ + P A I+ G +S + G ++ W
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
G+ N+ + YP L L +R + G+ F+ + + G YG+L
Sbjct: 223 GRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+ V L G + VACG H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G+ A D +V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 93 G---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
D + P ++ L + G +H+ ++++ G +G N GQLG N
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEAN 237
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG +
Sbjct: 238 RAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN------ 289
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQK 267
+ PR + L G TI +VACG HT+A V S+G VY +G G G+LG R K
Sbjct: 290 --------EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 268 DEWVPRRV 275
+P+ V
Sbjct: 342 SLMLPQVV 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+ L+C GST +G G D +++P+++ ++ VA G H + + G+
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTANGK 60
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y G N+ QLGH ++ RP ++ EL Y + + G H++ ++E G L++G N
Sbjct: 61 VYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118
Query: 139 HGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG + + ++ P VR LVS+ V ACG + ++ L+S + + G YGQLG
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLG 176
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
N+ Y P + L G + +ACG NH+ + G V+ WG
Sbjct: 177 ------VNSPKDLTHCNY-----PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGK 311
G+LG ++ + P ++ + V ++ G S G ++ +G+
Sbjct: 226 NCGQLGLNDEANRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 312 LKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYG 368
L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTRS 339
Query: 369 QKSSAMPKKV 378
KS +P+ V
Sbjct: 340 TKSLMLPQVV 349
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P R+ L G I ++ G H V V +G Y+WG N QLG+G Q P
Sbjct: 60 SILEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118
Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLV 160
VS L K G H++V+T DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ V ACG + ++ V+ + G GQLG G+ QP
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G + +V CG HT+A+ +G +Y WG YG+LG + ++ P +V
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278
Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
++ E ++ + +SS T+ GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 66/287 (22%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
GAG + + +T++ G N G LG+G ++ +EP + L + + + + G+ V
Sbjct: 28 GAG-NEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHV 86
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ + +G + + G Y QLG+G+ N +A + L + + V
Sbjct: 87 VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAISV 132
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++ + G VY WG+ G++G ++ +PR+V +N + I+ G
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
++S G++Y WG NG+
Sbjct: 190 MSSMAVVDNGEVYAWGY---NGN------------------------------------- 209
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G G + + P ++ L+G+ V V CGY H+L + D
Sbjct: 210 -----GQLGLGSSGNQPT--PCRIAALQGIRVEQVVCGYAHTLALTD 249
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 54/189 (28%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
PR I L+G+ IV ++ G+ H V V S G VY+WG Y +LG+ P +V
Sbjct: 64 PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS-- 121
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N++ +A+ ++ GS +S G++Y
Sbjct: 122 --TNLINKKAISVACGSHHSMVLTCDGEVY------------------------------ 149
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + +P+KV L+ VI +ACG S
Sbjct: 150 ---------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMSS 192
Query: 397 LVIVDRTNV 405
+ +VD V
Sbjct: 193 MAVVDNGEV 201
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ + V G H +A+ EG Y WG N GQLG G+K + P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
V + ++ A SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + L P RL L I ++ G H + EG +
Sbjct: 42 EIFVLGTNCSGCLGL--GDVQSTL-EPRRLDSLSDKKIACLSYGS-GPHIILATTEGEVF 97
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P VS LS ++ + G H++V+T DG A+G+N
Sbjct: 98 TWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNS 157
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG +V + V+ + G GQLG
Sbjct: 158 GQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSV--AVVDTGEVYVWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANS 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G + + T + G N G LG G +++ +EP +
Sbjct: 11 SLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDS 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LSDKKIACLSYGSGPHIILATTEG-EVFTWGHNGYTQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P ++ L+ + +++VACG+ H++ + S G VY WG+ G++G ++ +PRRV
Sbjct: 116 LVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 176 GCLQNKVV---VNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 233 IRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 52 EIFVLGTNCCGCLGL--GDIQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 107
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G N
Sbjct: 108 TWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNS 167
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL + V ACG + ++ V+ + G GQLG
Sbjct: 168 GQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCS--MAVVDSGEVYVWGYNGNGQLGL 225
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ ++T P IAAL G + +VACG HT+ + G VY WG
Sbjct: 226 GSSGNHST--------------PCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANS 271
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 272 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 324
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 70/305 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + +T + G N G LG G I++ IEP +
Sbjct: 21 SLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDS 80
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N +
Sbjct: 81 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYNQLGNGTTNHGSV------------ 127
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG G++G ++ +PRRV
Sbjct: 128 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVT 185
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ I+ G + S G++Y+W G+N
Sbjct: 186 GCLQNRVV---VNIACGQMCSMAVVDSGEVYVW--------------------GYN---- 218
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
GN G+LG G G S+ P ++ L+G+ V VACGY H+
Sbjct: 219 --GN-------------------GQLGLGSSGNHST--PCRIAALQGIRVQRVACGYAHT 255
Query: 397 LVIVD 401
LV+ D
Sbjct: 256 LVLTD 260
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + ++ T +R L G+ I VAA H +AV +G ++WG N+RGQLG G I
Sbjct: 532 GTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTIS 591
Query: 98 RDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+ P ++ L KY I A H+ VV+ +G L FG N GQLG +++ P
Sbjct: 592 KSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQV 651
Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V L S+ VT ACG TV ++ + + G YGQLG G T
Sbjct: 652 VDALSSQVVTKAACGLYHTV--AATSDGEVYSFGKNDYGQLGLGHARNIKT--------- 700
Query: 215 EAQPRPRAIAALAGET---IVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKD- 268
P + GE+ IV V+CG HTV + KG + TWG YG+L G +E K+
Sbjct: 701 -----PALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNS 755
Query: 269 -EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++VP + +N S G +S G++ ++G+
Sbjct: 756 AQFVPLPMSSKIKNA--------SCGCYHSLILMSNGRVMVFGR 791
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V G T+G N+ GQLG + P +V LS + KA G HTV T D
Sbjct: 617 HSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSD 676
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASI 184
G +FG N +GQLG G RN P+ V+ + E + A +CG TV +S E +
Sbjct: 677 GEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTIS--EKGKL 734
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G YGQLG G+ N+ AQ P +++ I +CG H++ +
Sbjct: 735 ITWGRNDYGQLGIGSKEHKNS----------AQFVPLPMSS----KIKNASCGCYHSLIL 780
Query: 245 DSKGYVYTWGFGGYGRLG 262
S G V +G G+LG
Sbjct: 781 MSNGRVMVFGRNNKGQLG 798
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 156/399 (39%), Gaps = 68/399 (17%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
VA E ++ G+N G+L G + V S I+ G VV DG
Sbjct: 458 VASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGG 517
Query: 131 SLAFGWNKHGQLGSGSIRNE-IEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILN 186
G NK GQ G+G+ I +PVR L + A A G + + ++S +GA + +
Sbjct: 518 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVAS-DGA-VFS 575
Query: 187 AGLPQYGQLGHGTD--------------NEYNTKDSSVKLAYEA---------------- 216
G GQLG G+ +Y+ ++V + A
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
Query: 217 ----------QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
Q P+ + AL+ + + K ACG HTVA S G VY++G YG+LG
Sbjct: 636 GQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHA 695
Query: 267 KDEWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----------LKN 314
++ P V + + + + +S G ++ + G+L WG+ ++
Sbjct: 696 RNIKTPALVKTSLGESDEKI---VAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSA 373
P P+ ++ G H + ++ + +G G+LG G S+
Sbjct: 753 KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSAD 808
Query: 374 MPKKV--DILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
+P V + L V+ +A G+ S ++ R++ LD
Sbjct: 809 LPLPVPSNSLANDEVVRIAAGFYSSYILTGRSSDNADLD 847
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 43 NLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
N+ +P ++ +G D + VA C H V + +G+ TWGRN+ GQLG G K ++
Sbjct: 697 NIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSA 756
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPV 156
V KIK A G H++++ +G + FG N GQLG+G ++ + P PV
Sbjct: 757 QFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPV 813
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 24/273 (8%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P L+ +G +R VA G V H V G WG N+ GQ G G + Q + PT V
Sbjct: 19 TPRMLKKAMGRQVRDVACGLV--HSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVG 76
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L G +HTVVV+EDG ++G +GQLG GS N PS V+ + +V
Sbjct: 77 SLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVL 136
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A CG TV + + G + G + GQ G G+ ++ + P+ +
Sbjct: 137 AVTCGVGHTVIV--LAGGELYTCGWNKNGQCGVGSTSDLLS--------------PQCVE 180
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L GE + +CG HT V G V+T+G G G+LGH + +D +PRRV V
Sbjct: 181 SLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL----VG 236
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
++++ G + C A +++ +G L N G
Sbjct: 237 IVMSMVACGEEYTVCAAFDHRVFGFG-LNNVGQ 268
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + L GV V+ G H V V +GR ++WG GQLGHG + P++V
Sbjct: 72 PTFVGSLFGVACMSVSCG--GAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQA 129
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
+ + G HTV+V G GWNK+GQ G GS + + P V L E V
Sbjct: 130 MRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQH 189
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+CGA T ++ G + G GQLGHG + +D S+ PR + A
Sbjct: 190 ASCGAGHTAVVTG--GGEVFTFGSGSCGQLGHG-----DCQDLSM---------PRRVGA 233
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNV 283
L G + VACG +TV V+ +G G+LG ++ PR+++ + V
Sbjct: 234 LVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEV 293
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 31/311 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG+ G+++ P ++ + +++ G H+ +V G L +G NK+
Sbjct: 2 YFWGQAGSAV---GEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKY 58
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQ G+G+ P+ V L + +CG TV +S E + + GL GQLGHG
Sbjct: 59 GQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVS--EDGRVFSWGLGANGQLGHG 116
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ + T P + A+ G ++ V CG HTV V + G +YT G+
Sbjct: 117 SRDNLTT--------------PSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKN 162
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
G+ G D P+ V+ + V S G+ +++ GGG+++ +G
Sbjct: 163 GQCGVGSTSDLLSPQCVESLRGEGVQHA----SCGAGHTAVVTGGGEVFTFGSGSCGQLG 218
Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKS 371
+GD D P+ + L G + + G + A D +G G+LG
Sbjct: 219 HGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPY 278
Query: 372 SAMPKKVDILE 382
+ P++++ L+
Sbjct: 279 LSEPRQMEFLK 289
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 165/364 (45%), Gaps = 46/364 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P RL L +I V +G H +A+ +G +TWG N GQLG G R P V
Sbjct: 100 LAPVRLAALE--NIVSVVSG--DAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRV 155
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
+ L + AG H++ + EDG A+G N HGQLG G + + P V L + V
Sbjct: 156 AGLDS--VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGL-NGVV 212
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G DFT L+ +E ++ G GQLG GT + + P ++
Sbjct: 213 ALAAGFDFT--LAVLEDGTVRAWGSNGSGQLGDGTSTQ--------------RLSPVKVS 256
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L+G I +V GT H +A+ G V+TWG G+LG D VP +V +R +
Sbjct: 257 ELSG--ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAV 314
Query: 285 PPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNGD--DWMYPKPLMDLSGWNLRCMD 337
A++ G+V + G GQL +GD D P P+ L+ + +
Sbjct: 315 ASMDSDSLALLDTGAVFAWGANGSGQL-------GDGDTTDRATPGPVPGLN--AVASVV 365
Query: 338 SGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G H V D + +WG G+LG+G G + +P V L G V S+A G HS
Sbjct: 366 GGAQHALVLRKDGTLWAWGGGLSGQLGHG--GSERHVVPAPVMRLAG--VTSMATGSFHS 421
Query: 397 LVIV 400
L +
Sbjct: 422 LAAL 425
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 162/349 (46%), Gaps = 42/349 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VA+ + H +AV ++G + WGRN GQLG G + R RP V L+ + A
Sbjct: 461 VRSVAS--AAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAA 516
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G SH + + DG+ A+G+N GQLG G+ + + P V L V A A G+ F++ L
Sbjct: 517 GGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL-GAVVAVAAGSYFSMALQ 575
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S ++ G GQLG G + + P + LA I +VA G
Sbjct: 576 S--DGTVWTWGEGFEGQLGDGGGVQ--------------RLSPVRVEGLA--NITRVAAG 617
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+ H +AV G V+ WG G G+LG D + P +V Q +S G +S
Sbjct: 618 SAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQGIT------AVSGGRSHS 671
Query: 298 SCTAGGGQLYMWGK--LKNNGDDWMY----PKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
G G + WG GD + P + L+G ++ + ++H + AD +
Sbjct: 672 MALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTG--IQALHPSHLHVLALHADGT 729
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG+ ++G+LG G G SA+P +V + + +SV G H+L++
Sbjct: 730 LRGWGYNRFGQLGLGAAGW--SAVPVQVRGIGRVDRLSV--GRAHTLMV 774
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 141/331 (42%), Gaps = 44/331 (13%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H +A +G + WGRN GQLG G +R V L ++ + H++ V
Sbjct: 418 SFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGG--VRSVASAAHHSLAVG 475
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
DG A+G N GQLG G+ + P V L S VTA A G + L S S+
Sbjct: 476 MDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS-VTAVAAGGSHVLALRS--DGSVWA 532
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQLG GT + T P ++ L +V VA G+ ++A+ S
Sbjct: 533 WGYNALGQLGDGTTVDRLT--------------PVRVSGLG--AVVAVAAGSYFSMALQS 576
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G V+TWG G G+LG P RV+ N+ ++AGS ++ G G +
Sbjct: 577 DGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLA--NI----TRVAAGSAHALAVRGDGTV 630
Query: 307 YMWGKLKNNGD---------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
+ WG +NG+ D P + L G + + G H + D + +WG+
Sbjct: 631 WAWG---DNGEGQLGDGSWADRFRPVQVPGLQG--ITAVSGGRSHSMALQGDGTVRAWGY 685
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
YG+LG G S P + L G+ +
Sbjct: 686 NGYGQLGDGTL--TSRVRPALIPGLTGIQAL 714
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 40/330 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA + H +A+ +G + WG N GQLG G R RP V+ L + G+G
Sbjct: 1167 VVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGG 1224
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H + V DG+ +G+N GQLG G+ + P+ V L V A A G +++ L S
Sbjct: 1225 YHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGL-EGVVAVAGGDHYSLALHS- 1282
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G GQLG GT ++ + + R G
Sbjct: 1283 -DGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVR----------------AGAT 1325
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HTVA+ G V+TWG +G+LG + VPR V L + + AG+ ++
Sbjct: 1326 HTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPN------LSSVSAVGAGARHT 1379
Query: 298 SCTAGGGQLYMWGKLKNN----GDDWMYPKPLM--DLSGWNLRCMDSG-NMHHFVGADSS 350
A G ++ WG+ + GD+ +PL +LS ++ + G + + D +
Sbjct: 1380 FAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELS--DVTVVSGGADFSLAMKRDGT 1437
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+SWG + YG LG G G +SS P +V +
Sbjct: 1438 VLSWGSSLYGSLGLGATGHRSS--PGQVAL 1465
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 158/369 (42%), Gaps = 58/369 (15%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+SP R+ L +I VAAG S H +AV +G + WG N GQLG G R RP V
Sbjct: 600 LSPVRVEGLA--NITRVAAG--SAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQV 655
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---- 160
L I GRSH++ + DG A+G+N +GQLG G++ + + P+ + L
Sbjct: 656 PGLQG--ITAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQA 713
Query: 161 ---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
S + A AD T + G ++GQLG G + A
Sbjct: 714 LHPSHLHVLALHADGT----------LRGWGYNRFGQLGLGAAG------------WSAV 751
Query: 218 P-RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + R I + +++ G HT+ V + G V WG G G+LG P V
Sbjct: 752 PVQVRGIG-----RVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVP 806
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPKPLMDLSGWNLR 334
+P +++G +S A G ++ WG GD P+ L LR
Sbjct: 807 ------GVPCVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVE-GLR 859
Query: 335 CMDS----GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G+ + AD S SWG G+LG G + A+P V+ L + ++VA
Sbjct: 860 GVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDR--ALPAHVEHLS--NAVAVA 915
Query: 391 CGYGHSLVI 399
G H+L +
Sbjct: 916 VGETHALAV 924
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 162/392 (41%), Gaps = 76/392 (19%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA H +AV +G + WG N GQLG G P V L + + AGR+
Sbjct: 912 VAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLER--VASVAAGRA 969
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTA-----TACGADFT 173
+V V +DG + A+G N GQLG G+ P+ V L + ++A A AD T
Sbjct: 970 FSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGT 1029
Query: 174 VW---------------------------LSSVEG---------ASILNA-----GLPQY 192
VW L VE A +L+ G +Y
Sbjct: 1030 VWTWGDNTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEY 1089
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G T + + +P R + A +V++ S G V T
Sbjct: 1090 GQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQM-----------SDGTVQT 1138
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
WG +G+LG VP + V+ +V+ +S+G+ +S G ++ WG
Sbjct: 1139 WGDNTFGQLGDGTTTRRAVP--LTVYGLASVV----AVSSGAWHSLALLSDGTVWAWGAN 1192
Query: 312 -LKNNGDDWMYP--KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
GD P +P+ ++ + SG H V +D S +WG+ +G+LG G
Sbjct: 1193 GFGQLGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGT- 1251
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+S ++P +V+ LEG V++VA G +SL +
Sbjct: 1252 -AESRSLPTRVEGLEG--VVAVAGGDHYSLAL 1280
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 38/370 (10%)
Query: 46 SPTRLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
SPT + P ++R V A VAV ++G WG NE GQLG G + P V
Sbjct: 1047 SPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAV 1106
Query: 105 S-ELSKYK--IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
E K + ++ A H VV DG +G N GQLG G+ P V L S
Sbjct: 1107 KIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLAS 1166
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V A + GA + L+ + ++ G +GQLG GT PR R
Sbjct: 1167 -VVAVSSGAWHS--LALLSDGTVWAWGANGFGQLGDGTST----------------PRTR 1207
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +V + G H +AV S G V+TWG+ +G+LG + +P RV+ +
Sbjct: 1208 PVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEG- 1266
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCM 336
++ G S G L WG +L + Y + + + +
Sbjct: 1267 -----VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRYSR-VAVKGVDGVVDV 1320
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
+G H + D + +WG +G+LG G G + +P+ V L V +V G H
Sbjct: 1321 RAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLS--SVSAVGAGARH 1378
Query: 396 SLVIVDRTNV 405
+ + + V
Sbjct: 1379 TFAVALKGTV 1388
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 150/354 (42%), Gaps = 42/354 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P R+ L V VA S +A+ +G +TWG GQLG G +QR P V
Sbjct: 550 LTPVRVSGLGAV----VAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRV 605
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ I + AG +H + V DG A+G N GQLG GS + P V L +T
Sbjct: 606 EGLA--NITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGL-QGIT 662
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + G ++ +++G + A G YGQLG GT ++ RP I
Sbjct: 663 AVSGGRSHSM---ALQGDGTVRAWGYNGYGQLGDGT--------------LTSRVRPALI 705
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L G I + H +A+ + G + WG+ +G+LG VP +V R +
Sbjct: 706 PGLTG--IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDR 763
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
L S G ++ G + WG+ +G P+ +R + SG
Sbjct: 764 L------SVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASG 817
Query: 340 NMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
H A D + +WG G+LG G + + P V+ L G V+++A G
Sbjct: 818 IQHSLALACDGTVWAWGANARGQLGDGTTTPRVT--PGLVEGLRG--VVALAAG 867
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 62/326 (19%)
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
H + QR +V +I AG H++ ++ G+ A W +G G +
Sbjct: 47 HATRTQR----VVVTAPPMRIA---AGTQHSLYLSPGGDVWA--WGGNGSGQLGGAETSL 97
Query: 152 E-PSPVRC-----LVSEVT----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
+ +PVR +VS V+ + A GAD +VW G GQLG GT
Sbjct: 98 QGLAPVRLAALENIVSVVSGDAHSLALGADGSVW----------TWGGNSSGQLGDGTTT 147
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ T P +A L +++V VA G H++A+ G V+ WG +G+L
Sbjct: 148 DRAT--------------PMRVAGL--DSVVAVAAGDFHSLALREDGTVWAWGTNFHGQL 191
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPP-----EAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
G + P +V L AV+ G+V + + G GQL
Sbjct: 192 GRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLG-----DGTS 246
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+ P + +LSG + + +G H +G D +WG G+LG G + + A+P
Sbjct: 247 TQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDR--AVP 302
Query: 376 KKVDILEGMHVISVACGYGHSLVIVD 401
+V LE V +VA SL ++D
Sbjct: 303 MQVPGLE--RVKAVASMDSDSLALLD 326
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 111/219 (50%), Gaps = 21/219 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGR 119
V C H +A+ G+ Y+WG N GQLG G ++ + +P ++S L+ I G
Sbjct: 217 VQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGG 276
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSS 178
H++ +++ G +G N GQLG RN P ++ L ++V ACG +F+V+L+
Sbjct: 277 YHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTV 336
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G AG+ YGQLGHG T NE PR + L G T+ +++CG
Sbjct: 337 DGGVFTCGAGM--YGQLGHGNTSNEI---------------LPRQVMELMGSTVTQISCG 379
Query: 238 TNHTV-AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
HT+ V S+G VY WG GG G+LG+ + P+ V
Sbjct: 380 KRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVV 418
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 173/380 (45%), Gaps = 40/380 (10%)
Query: 10 VEEETGKEKGGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
VE T +K +FC GST +G G D N++ P L +I +A G
Sbjct: 68 VEYSTVTDKN---MFCWGSTIHGELGL-GGIEDENILVPRELDFQKATEIEQIACG--EN 121
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ V + +G+ Y+ G N+ GQLGH R R ++ L + KK G HT+ V E
Sbjct: 122 YTVLITRDGQVYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKVACGAHHTLAVNEW 179
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE--PSPVRCL-VSEVTATACGADFTVWLSSVEGASIL 185
G ++G N GQLG S +N IE P VR L S V ACG + + L++ +
Sbjct: 180 GQLFSWGSNAEGQLGLNS-KNLIECVPHMVRALGTSVVVQVACGINHVLALTN--NGKLY 236
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G GQLG GTD + + +P+ I++LAG I + CG H++A+
Sbjct: 237 SWGSNSDGQLGLGTD-------------VKNEIKPKLISSLAGVPIAFITCGGYHSMAIS 283
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTA 301
G V+ WG +G+LG + ++ +PR++ Q V E + T
Sbjct: 284 KSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTC 343
Query: 302 GGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQ 358
G G M+G+L + N + + P+ +M+L G + + G H V + +WG
Sbjct: 344 GAG---MYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGG 400
Query: 359 YGELGYGPYGQKSSAMPKKV 378
G+LG +S A P+ V
Sbjct: 401 AGQLGNNI--TRSVATPQVV 418
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 36/333 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK---IKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG G+LG G I+ + + EL K I++ G ++TV++T DG + G
Sbjct: 79 FCWGSTIHGELGLGG-IEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137
Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N +GQLG R ++ P + V + ACGA T L+ E + + G GQL
Sbjct: 138 NDYGQLGHEKGRKRLQLIPGLDAFVFK--KVACGAHHT--LAVNEWGQLFSWGSNAEGQL 193
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G + N + P + AL +V+VACG NH +A+ + G +Y+WG
Sbjct: 194 GLNSKNL-------------IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGS 240
Query: 256 GGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
G+LG + K+E P+ + P A I+ G +S + G ++ WGK
Sbjct: 241 NSDGQLGLGTDVKNEIKPKLISSLAG----VPIAFITCGGYHSMAISKSGAVFGWGKNTF 296
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
N+ + P+ L L + G F+ D + G YG+LG+G
Sbjct: 297 GQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG-- 354
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P++V L G V ++CG H+L +V
Sbjct: 355 NTSNEILPRQVMELMGSTVTQISCGKRHTLGLV 387
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
AC V S+V ++ G +G+LG G +D ++ + PR +
Sbjct: 61 ACEPIIAVEYSTVTDKNMFCWGSTIHGELGLG-----GIEDENILV-------PRELDFQ 108
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVL 284
I ++ACG N+TV + G VY+ G YG+LGH + ++ + +P +D F V
Sbjct: 109 KATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIPG-LDAFVFKKV- 166
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLS-GWNLRCMDS 338
+ G+ ++ GQL+ WG +L N + + P M + G ++ +
Sbjct: 167 ------ACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVA 220
Query: 339 GNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
++H + ++ SWG G+LG G K+ PK + L G+ + + CG HS
Sbjct: 221 CGINHVLALTNNGKLYSWGSNSDGQLGLGT-DVKNEIKPKLISSLAGVPIAFITCGGYHS 279
Query: 397 LVI 399
+ I
Sbjct: 280 MAI 282
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 164/400 (41%), Gaps = 75/400 (18%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
L E ++ E K ++ GST +G G D N++ P L +I+ +A
Sbjct: 10 LANEPVIAVEYPLHKKKDMFCWGSTIHGELGL-GGIEDENILIPRELDFKKAAEIQQIAC 68
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
G + V + G Y+ G N+ GQLGH R R ++ L + KKA G HT+
Sbjct: 69 G--ENYTVVITQIGEIYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKAACGAYHTL 124
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
+ E G ++G N GQLG S +N +E SP V+ L S V ACG L++
Sbjct: 125 AINEWGQLFSWGSNTEGQLGLNS-KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-- 181
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G GQLG GTD +Y K P+ I+A G I +ACG H
Sbjct: 182 NGELYSWGSNSEGQLGLGTDTKYEIK-------------PKFISAFIGIPIAFIACGGYH 228
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++A+ G V+ WG +G+LG + +D +P ++ Q + C
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI---------------CY 273
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
A G+ F+ D + G YG
Sbjct: 274 AACGE----------------------------------EFSVFLTVDGGVFTCGAGMYG 299
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+LG+G + +P++V L G V ++CG H+L +V
Sbjct: 300 QLGHG--SNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGR 119
V C H A+ G Y+WG N GQLG G D +P +S I G
Sbjct: 167 VQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGG 226
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSS 178
H++ +++ G +G N GQLG ++ P ++ L +++ ACG +F+V+L+
Sbjct: 227 YHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G AG+ YGQLGHG+++ + PR + L G T+ +++CG
Sbjct: 287 DGGVFTCGAGM--YGQLGHGSNSN--------------EILPRQVMELMGSTVTQISCGK 330
Query: 239 NHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
HT+A V S+G VY WG GG G+LG+ + P+ V
Sbjct: 331 RHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + +G+ I F+A G H +A+ G + WG+N GQLG D R+ P +
Sbjct: 206 IKPKFISAFIGIPIAFIACG--GYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQL 263
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L KI A G +V +T DG G +GQLG GS NEI P V L+ S V
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV 323
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLG-HGT 199
T +CG T+ L G + GL GQLG H T
Sbjct: 324 TQISCGKRHTLALVPSRG-RVYAWGLGGAGQLGNHST 359
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 164/409 (40%), Gaps = 74/409 (18%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP + L G++ VAAG + V G Y WG N GQLG GD+ P +V
Sbjct: 101 SPRLVDALKGINSASVAAGGM--QMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVK 158
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR----------------- 148
L +K + HTV +DG++ A+G +G+LG +
Sbjct: 159 ALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPT 218
Query: 149 --NEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVE--GASILNAGLPQYG 193
EP CLV +T ACG T +L E S+ GL G
Sbjct: 219 KGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNG 278
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + + P + AL I +ACG +HT V S G +Y W
Sbjct: 279 RLGHGDEEDRHL--------------PTPVHALENLNITAIACGAHHTACVTSGGTLYMW 324
Query: 254 GFGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
G +G+LG + + +P+ V RN + ++ GS +S+C G+LY WG+
Sbjct: 325 GGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTV---VSVALGSQHSACVTTDGELYTWGQG 381
Query: 313 KNNG------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-------SWGHAQY 359
+ G D P+ + L G + + G+ H ++CI +WG ++
Sbjct: 382 RRLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAH------TACIVENGNVWAWGTSRI 435
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
LG+G + P + L G V+ ++C + D V +
Sbjct: 436 --LGHGDL-EAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVSSK 481
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 144/337 (42%), Gaps = 33/337 (9%)
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
++ P +V L AG VV++ G +G N GQLG+G R+ P
Sbjct: 97 LESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRV 156
Query: 156 VRCLVSEVT-ATACGADFTV----------WLSSVEGASILNA-GLPQYGQLGHGTDNEY 203
V+ L ++ AC + TV W ++ G L+ +P LG
Sbjct: 157 VKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGA 216
Query: 204 NTKDSSVKLAYEA--QPRPRAIAALAGETIVKVACGTNHTVAV----DSKGYVYTWGFGG 257
TK + + A PR + +L G I VACG HT + K ++T G G
Sbjct: 217 PTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGL 276
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
GRLGH +++D +P V + N+ I+ G+ +++C GG LYMWG
Sbjct: 277 NGRLGHGDEEDRHLPTPVHALENLNI----TAIACGAHHTACVTSGGTLYMWGGAAFGKL 332
Query: 311 KLKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
L + + PK + L + + G+ H V D +WG + LG+ G
Sbjct: 333 GLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEVQG 390
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ +P++V+ L G+ VI V CG H+ IV+ NV
Sbjct: 391 ESDEFLPRRVEALVGLFVIHVVCGDAHTACIVENGNV 427
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 165/400 (41%), Gaps = 75/400 (18%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
L +E ++ E K ++ GST +G G D N++ P L +I+ +A
Sbjct: 10 LASEPVIAVEYPLHKKKDMFCWGSTIHGELGL-GGIEDENILIPRELDFKKAAEIQQIAC 68
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
G + V + G Y+ G N+ GQLGH R R ++ L + KKA G HT+
Sbjct: 69 G--ENYTVVITQIGEIYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKAACGAYHTL 124
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
+ E G ++G N GQLG S +N +E SP V+ L S V ACG L++
Sbjct: 125 AINEWGQLFSWGSNTEGQLGLNS-KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-- 181
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G GQLG GTD +Y K P+ I+A G I +ACG H
Sbjct: 182 NGELYSWGSNSEGQLGLGTDIKYEIK-------------PKFISAFIGIPIAFIACGGYH 228
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++A+ G V+ WG +G+LG + +D +P ++ Q + C
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI---------------CY 273
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
A G+ F+ D + G YG
Sbjct: 274 AACGE----------------------------------EFSVFLTVDGGVFTCGAGMYG 299
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+LG+G + +P++V L G V ++CG H+L +V
Sbjct: 300 QLGHG--SNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGR 119
V C H A+ G Y+WG N GQLG G I+ + +P +S I G
Sbjct: 167 VQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGG 226
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSS 178
H++ +++ G +G N GQLG ++ P ++ L +++ ACG +F+V+L+
Sbjct: 227 YHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G AG+ YGQLGHG+++ + PR + L G T+ +++CG
Sbjct: 287 DGGVFTCGAGM--YGQLGHGSNSN--------------EILPRQVMELMGSTVTQISCGK 330
Query: 239 NHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
HT+A V S+G VY WG GG G+LG+ + P+ V
Sbjct: 331 RHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + +G+ I F+A G H +A+ G + WG+N GQLG D R+ P +
Sbjct: 206 IKPKFISAFIGIPIAFIACG--GYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQL 263
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L KI A G +V +T DG G +GQLG GS NEI P V L+ S V
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV 323
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLG-HGT 199
T +CG T+ L G + GL GQLG H T
Sbjct: 324 TQISCGKRHTLALVPSRG-RVYAWGLGGAGQLGNHST 359
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G + ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLTGKKVACLSYG-SGPHVVLATSEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVDTGEVYVWGYSGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + + ACG HT+ + +G VY WG
Sbjct: 240 GGSGN--------------QPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P + + +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQPYPTPI-IVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 70/309 (22%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L +V + G+ V L++ EG + G Y QLG+GT N
Sbjct: 95 LTGKKVACLSYGSGPHVVLATSEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
+N V+ VN +C GQ+ ++ +
Sbjct: 200 GCLQNKVV----------VNIAC----GQM------------------------CSMAVV 221
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D+G ++ WG++ G+LG G G + + P +V L+G+ V ACGY H+
Sbjct: 222 DTGEVY----------VWGYSGNGQLGLGGSGNQPT--PCRVAALQGIRVQRAACGYAHT 269
Query: 397 LVIVDRTNV 405
LV+ D V
Sbjct: 270 LVLTDEGQV 278
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 40/338 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H VA+ +G ++WG N GQLG R P VS L+ + A +G+ HTV++ +
Sbjct: 359 HSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGR-ADATSGQLHTVMLGAN 417
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N+ GQLG+G+ ++ P PV +++V + A G T L S ++ G
Sbjct: 418 GRLWAWGDNQQGQLGNGTQQDSSLPLPVN--LTDVISVASGYRHTAALRS--DGTVWTWG 473
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ ++GQLG GT + +P P + L G T +A G NH++A+ S G
Sbjct: 474 MNRFGQLGEGTVTD--------------RPTPVQVVGLGGVT--AIATGDNHSLALRSNG 517
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WGF YG+LG D P V +N++ I+AG +S G ++
Sbjct: 518 TVWAWGFNRYGQLGDGTAVDRRQP--VQASGLSNIV----AIAAGGSHSLALRSDGTVWA 571
Query: 309 W-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
+ G+L N W + P + LS ++ + +G+++ + AD + +WG+ G+
Sbjct: 572 FGYNFDGQLGNGTRTWTLVPVQAVGLS--SVVSLAAGSLYSLALRADGTVWAWGYNASGQ 629
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G + SA P +V L G + S+A G HSL +
Sbjct: 630 LGVGT--TQGSAQPLQVPGLSG--ITSIAAGSYHSLAL 663
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G + WG N GQLG G + R +P S LS I AG SH++ + D
Sbjct: 509 HSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSN--IVAIAAGGSHSLALRSD 566
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G AFG+N GQLG+G+ + P L S V + A G+ ++ L+ ++ G
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTLVPVQAVGL-SSVVSLAAGSLYS--LALRADGTVWAWG 623
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG GT + +P + L+G I +A G+ H++A+ S G
Sbjct: 624 YNASGQLGVGTT--------------QGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDG 667
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+V+ WGF G+LG+ P V I AG +S G ++
Sbjct: 668 WVWAWGFNFEGQLGNGTSTPRLSPGLVAGMSN------AVAIIAGDQHSLAMKADGTVWA 721
Query: 309 WG 310
WG
Sbjct: 722 WG 723
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 38/336 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV +G + WG N GQLG G + P V+ L++ + AG +++ + D
Sbjct: 61 HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ--VTSVAAGDQYSLALDAD 118
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N GQLG G++ + + P V L S V + A G F L+ ++ G
Sbjct: 119 GAVWAWGDNASGQLGDGTLTSRLLPQRVSAL-SNVVSLASG--FAHVLALRADGTVWAWG 175
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ QLG GT SSV P + L+G +V V G + ++A+ + G
Sbjct: 176 DNRNNQLGDGTLTR-----SSV---------PLQVPGLSG--VVAVVAGGSSSLALRADG 219
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
++ WG YG+LG D RR+ Q + L +S G+ ++ G ++
Sbjct: 220 TLWAWGDNRYGQLG-----DGTTVRRITPVQVAS-LDSVVSVSVGAYHALALRADGTVWA 273
Query: 309 WGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
WG +G + +P + +S ++R + +GN H V D + +WG +Y +LG
Sbjct: 274 WGHNAYGQLGDGTNTQRTQP-VSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLG 332
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G SS +P + + G +++ GY HS+ +
Sbjct: 333 TGNL--TSSPLPLQAGMTGG---VTLVAGYRHSVAL 363
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 158/360 (43%), Gaps = 46/360 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV + VA G S +A+ +G + WG N GQLG G ++R P V+
Sbjct: 193 PLQVPGLSGV-VAVVAGGSSS---LALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVAS 248
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L GA H + + DG A+G N +GQLG G+ N PV +++V
Sbjct: 249 LDSVVSVSVGA--YHALALRADGTVWAWGHNAYGQLGDGT--NTQRTQPVSVSLTDVRTL 304
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
G + L+ ++ G +Y QLG G + P P
Sbjct: 305 VAGNYHS--LAVRTDGAVWAWGDNRYRQLGTGN--------------LTSSPLPLQAGMT 348
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G T+V G H+VA+ + G ++WG +G+LG + PR V Q + +
Sbjct: 349 GGVTLV---AGYRHSVALGADGTAWSWGDNVFGQLGDTTFE----PRMAPV-QVSGLALG 400
Query: 287 EAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN 340
A ++G +++ G+L+ W G+L N D P P ++L+ ++ + SG
Sbjct: 401 RADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP-VNLT--DVISVASGY 457
Query: 341 MH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + +D + +WG ++G+LG G + P V ++ V ++A G HSL +
Sbjct: 458 RHTAALRSDGTVWTWGMNRFGQLGEGTVTDR----PTPVQVVGLGGVTAIATGDNHSLAL 513
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G+ H++ V DG A+G+N+ GQLG G+ R++ P V L ++VT+ A G +++ L
Sbjct: 58 GQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL-TQVTSVAAGDQYSLALD 116
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ +GA + G GQLG GT ++ P+ ++AL +V +A G
Sbjct: 117 A-DGA-VWAWGDNASGQLGDGT--------------LTSRLLPQRVSAL--SNVVSLASG 158
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
H +A+ + G V+ WG +LG VP +V L + AG +S
Sbjct: 159 FAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVP------GLSGVVAVVAGGSSS 212
Query: 298 SCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G L+ WG + +G P+ S ++ + G H + AD +
Sbjct: 213 LALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLDSVVSVSVGAYHALALRADGTVW 272
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WGH YG+LG G Q++ P V + + V ++ G HSL +
Sbjct: 273 AWGHNAYGQLGDGTNTQRT--QPVSVSLTD---VRTLVAGNYHSLAV 314
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 216 AQPRPRAIAALAGETI--VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
A PR + AGE + V++A G H++AV S G V+ WGF G+LG +D+ P
Sbjct: 35 AAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPV 94
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMD 327
+V L ++AG S G ++ WG + GD + P+ +
Sbjct: 95 QV------AGLTQVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSA 148
Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
LS N+ + SG H + AD + +WG + +LG G S++P +V L G V
Sbjct: 149 LS--NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTL--TRSSVPLQVPGLSG--V 202
Query: 387 ISVACGYGHSLVI 399
++V G SL +
Sbjct: 203 VAVVAGGSSSLAL 215
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 49/366 (13%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D++ +A G H + +G Y+WG G++G+ I+ RP +V L+ +K
Sbjct: 264 LDVQSIACG--ETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDV 321
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH-GQLGSGSIRNEIEP----SPVRCLVSEVTATACGA 170
G HT VT G + +G + GQL S + RN+ P SP+ + V ACG
Sbjct: 322 AYGSKHTCAVTVSGELIEWGEGPYMGQLDSYA-RNQWFPHKLFSPLDGI--SVVKIACGP 378
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T ++S + G +G LGHG D + T RP+ + +L G
Sbjct: 379 WHTAIITS--SGQLYTYGDGTFGVLGHG-DTQGTT-------------RPKEVESLKGSR 422
Query: 231 IVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ VACG HT A+ + ++TWG G+LGH ++K + +P VD
Sbjct: 423 VKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTD 482
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMD-LSGWNLR 334
+ + +S G+ + + G ++ M G+L N D + L +R
Sbjct: 483 YDFIQ----VSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVR 538
Query: 335 CMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ SG+ H V + +WG + G+LG G + +S+ P VD LEG HV S++CGY
Sbjct: 539 HISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRST--PTLVDALEGRHVESLSCGY 596
Query: 394 GHSLVI 399
++ +
Sbjct: 597 NYTAAV 602
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
++P P + + + +ACG H + +G VY+WG GR+G++ P+ V
Sbjct: 251 SKPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVV 310
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW------GKLKNNGDDWMYPKPLMD-L 328
+V ++ GS ++ G+L W G+L + + +P L L
Sbjct: 311 QSLASLHVKD----VAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPL 366
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H + + ++G +G LG+G + + PK+V+ L+G V
Sbjct: 367 DGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHG--DTQGTTRPKEVESLKGSRVK 424
Query: 388 SVACGYGHSLVIVD 401
VACG H+ IV+
Sbjct: 425 CVACGPWHTAAIVE 438
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTV 123
C H +A+ G + WG N+ GQLG G+ ++ D+ V E I++ G H +
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
V + G+ A+G N +GQLG G +R EP+ V L V CG D++ ++S+ GA
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVF-CGDDYSACITSLGGAQ 625
Query: 184 ILNA------------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ G + G+LG G D + + K+ + ++ +L +
Sbjct: 626 SVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY 685
Query: 232 VKVAC--------GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+V C GT+H++A+ ++G Y WG G YGRLG + + P R D
Sbjct: 686 KRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDF------ 739
Query: 284 LPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN--NGDDWMYPKPLMDLSG 330
P+ V ++AG+ +S + G L+ WG+ ++ + ++M P+ M L G
Sbjct: 740 --PKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEG 790
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 153/412 (37%), Gaps = 95/412 (23%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKK----- 114
+SC H +A+ EG Y WG G LG GD P V SE K K+
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVG 245
Query: 115 -----------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
AG H++ T DG +G +G+LG G R + P+ V ++
Sbjct: 246 KVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRD 305
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
D +G + G +G+LGHG E P PR +
Sbjct: 306 IVFVNAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI--------------PVPRKV 350
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-----EWVPRRVDVF 278
G +++VACGT HT+A+ KG V+ WG G LG E +D VP+ +
Sbjct: 351 EGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG--LALGFGEGEDGSGGMVAVPKHL--- 405
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDL---- 328
+++ I+AG +S+ GG L +WG +GD + +PK + DL
Sbjct: 406 --SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRM 463
Query: 329 ----------------------------------SGWNLRCMDSGNMHHFVGADSSCI-S 353
S W L+ ++ G H + +
Sbjct: 464 YVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWV 523
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG G+LG G ++ P K++ + +ACG H L + +V
Sbjct: 524 WGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLAVAQYGDV 574
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 154/402 (38%), Gaps = 83/402 (20%)
Query: 77 GRCYTWGRNERGQLGH----------------------GDKIQRDRPTIVSELSKYKIKK 114
G+ YT+G RG+LG+ G +P+ V K KI +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV------------------ 156
G HT+ ++++G A+G +G LG G + P V
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVG 245
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ V T C A ++ ++ G G+LG G +
Sbjct: 246 KVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN--------------RG 291
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + + IV V G +H+ +D +G +YTWG GG+GRLGH +Q + VPR+V+
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVE 351
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMD 327
F VL ++ G+ ++ G ++ WG +G PK L D
Sbjct: 352 GFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD 407
Query: 328 LSGWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEG 383
+ L + +G H VG D + WG LG+G Q++ PK V D+
Sbjct: 408 IEAAVLN-IAAGPYHSAAVTVGGD--LLVWGVGGSSRLGHGD--QQNQPFPKYVADLRNR 462
Query: 384 MHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNE 425
M+V + S++ V R LDV D +S N+
Sbjct: 463 MYVSDL-----QSMLGVSRLK--REYSDLDVLDVPGTSGTNQ 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
+G +G+L SP + ++ DI FV AG H +D +G YTWG G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDIVFVNAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-----HGQLGSGSI 147
GD+ + P V + + G HT+ +T G A+G G+ GSG +
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM 398
Query: 148 ------RNEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ---YGQLG 196
++IE + + A G D VW V G+S L G Q + +
Sbjct: 399 VAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRA------IAALAGE-----TIVKVACGTNHTVAVD 245
N D L R + + +G T+ + CG +HT+A+
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516
Query: 246 SKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
G V+ WG G+LG E ++D++ P +++ F P I+ GS + A
Sbjct: 517 GAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFST-----PIRRIACGSKHCLAVAQY 571
Query: 304 GQLYMWGKLKN 314
G ++ WG N
Sbjct: 572 GDVFAWGANDN 582
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 143/394 (36%), Gaps = 105/394 (26%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL------------- 107
+AAG H AV V G WG +LGHGD+ + P V++L
Sbjct: 415 IAAG--PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSML 472
Query: 108 -------------------------SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
S + ++ G SHT+ +T G +G N GQL
Sbjct: 473 GVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQL 532
Query: 143 GSGSI--RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
G G ++ EP + C + + ACG+ L+ + + G GQLG G
Sbjct: 533 GLGEDVEEDQYEPVKLECFSTPIRRIACGSKHC--LAVAQYGDVFAWGANDNGQLGLGV- 589
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG------------ 248
V+ ++E P A+ AL V V CG +++ + S G
Sbjct: 590 ---------VRPSFE----PAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTE 634
Query: 249 --YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
++ WG G+LG E DV + + P + V S S + Q
Sbjct: 635 FGDLWAWGAAESGKLGLGE----------DVASGSILTPQKVVFSVPVCACSLDSLEMQA 684
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
Y K + +S + SG H + A C +WG YG LG G
Sbjct: 685 Y---------------KRVFCVS---FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIG 726
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
++ P + D +G+ + SVA G HSL +
Sbjct: 727 T--TANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 36/350 (10%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
V EG+ Y G G+LG GD P + LS++ IKK +G H + +T+DG
Sbjct: 2637 VSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGK 2696
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
++G + G+LG G+ + +P + L S+ + ACG+ + ++S + GL
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIAS--NGELYTWGL 2754
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
+YG+LGHG Q RP+ + AL G+ +V+VACG+ T+A+ +
Sbjct: 2755 GEYGRLGHGDT--------------ITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTD 2800
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY+WG G +G+LG + P VD V+ E G+ S G+++
Sbjct: 2801 GCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVE----CGAQFSLALTKYGEVW 2856
Query: 308 MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
WGK +G+D KP + L G + + G +H D+ + +WG +G
Sbjct: 2857 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
+ G G + P V LE V V+CG HS+ V+VD+ + G +
Sbjct: 2917 QQGNG--ATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQPSNGNQ 2964
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 21/272 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N+ P + L I+ VA H +A+ +G+ ++WG E G+LGHG+ I D+
Sbjct: 2659 DNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDK 2718
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ L +I+ G H+ + +G +G ++G+LG G + P V+ LV
Sbjct: 2719 PKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALV 2778
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQP 218
+ V ACG+ ++ + + G +G+LG G+D Y
Sbjct: 2779 GQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYT-------------- 2824
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P A+ L G +++V CG ++A+ G V+TWG G Y RLGH P V+
Sbjct: 2825 -PLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGL 2883
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2884 RGKKIIH----VAVGALHCLAVTDTGQVYAWG 2911
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 144/340 (42%), Gaps = 38/340 (11%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N++ QLG G KI+ P LSK K G +V+++G A G
Sbjct: 2592 YVWGLNDKDQLGGLKGSKIKL--PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 2649
Query: 138 KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G N EP + L V + A G + L+ + + + G + G+
Sbjct: 2650 TNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 2707
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + +P+ I L + I +ACG+ H+ A+ S G +YTWG
Sbjct: 2708 LGHGNCISLD--------------KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWG 2753
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
G YGRLGH + + P+ V V+ ++ GS ++ A G +Y W
Sbjct: 2754 LGEYGRLGHGDTITQTRPKLVQALVGQRVVQ----VACGSRDAQTMALTTDGCVYSWGDG 2809
Query: 310 --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
GKL G D Y +D L+G + ++ G + +WG Y LG+G
Sbjct: 2810 DFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 2869
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P V+ L G +I VA G H L + D V
Sbjct: 2870 --NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 2907
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ I +A+ H +A+ +G Y+WG + G+LGHGD + D P ++
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIES 195
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I G +++ ++ G +G +G+LG G+ + + P+ V L V
Sbjct: 196 LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVH 255
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ + L + + G YG+LG G + T P+ +
Sbjct: 256 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--------------PKIVDK 301
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L +VKV CG + A+ + G VYTWG G RLGH ++ P+ ++ + +
Sbjct: 302 LLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKI-- 359
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
+S G+ + +Y WG+
Sbjct: 360 --KDLSVGTTHILALTEDQFVYGWGR 383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+ +I F+A G S + A+ G YTWGR G+LGHG+ PT+V+
Sbjct: 190 PKLIESLLDKNIVFIACG--STYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
L + + G+G S T+ VT G ++G +G+LG G P V + L V
Sbjct: 248 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 307
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG F+ L++ + G +LGHG++ E P+ I
Sbjct: 308 VKVFCGGQFSAALTA--HGEVYTWGKGDAYRLGHGSE--------------EHVRYPKVI 351
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+L + I ++ GT H +A+ +VY WG YG++
Sbjct: 352 ESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + + + I +A + H +A+ G VY+WG G GRLGH + P+ ++
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIES 195
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
N++ I+ GS S+ + G+LY WG+ N DD + P + L G
Sbjct: 196 LLDKNIV----FIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGH 251
Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
++ C + V A SWG YG+LG G G S PK VD L ++V+
Sbjct: 252 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 309
Query: 389 VACG 392
V CG
Sbjct: 310 VFCG 313
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ PT + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2871 DHHVRKPTLVEGLRGKKIIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGATSVNRK 2928
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P++V +L ++ + G SH++
Sbjct: 2929 PSLVHDLEDARVNRVSCGSSHSI 2951
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++PT + L G + VA G + V G ++WG + G+LG G P
Sbjct: 238 DVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 297
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
IV +L + K G + +T G +G +LG GS + P + L
Sbjct: 298 IVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESL 354
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTV 123
C H +A+ G + WG N+ GQLG G+ ++ D+ V E I++ G H +
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
V + G+ A+G N +GQLG G +R EP+ V L V CG D++ ++S+ GA
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVD-VFCGDDYSACITSLGGAQ 625
Query: 184 ILNA------------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ G + G+LG G D + + K+ + ++ +L +
Sbjct: 626 SVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY 685
Query: 232 VKVAC--------GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+V C GT+H++A+ ++G Y WG G YGRLG + + P R D
Sbjct: 686 KRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDF------ 739
Query: 284 LPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN--NGDDWMYPKPLMDLSG 330
P+ V ++AG+ +S + G L+ WG+ ++ + ++M P+ M L G
Sbjct: 740 --PKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEG 790
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 153/412 (37%), Gaps = 95/412 (23%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKK----- 114
+SC H +A+ EG Y WG G LG GD P V SE K K+
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVG 245
Query: 115 -----------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
AG H++ T DG +G +G+LG G R + P+ V ++
Sbjct: 246 KVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRD 305
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
D +G + G +G+LGHG E P PR +
Sbjct: 306 IVFVNAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI--------------PVPRKV 350
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-----EWVPRRVDVF 278
G +++VACGT HT+A+ KG V+ WG G LG E +D VP+ +
Sbjct: 351 EGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG--LALGFGEGEDGSGGMVAVPKHL--- 405
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDL---- 328
+++ I+AG +S+ GG L +WG +GD + +PK + DL
Sbjct: 406 --SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRM 463
Query: 329 ----------------------------------SGWNLRCMDSGNMHHFVGADSSCI-S 353
S W L+ ++ G H + +
Sbjct: 464 YVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWV 523
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG G+LG G ++ P K++ + +ACG H L + +V
Sbjct: 524 WGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLAVAQYGDV 574
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 154/402 (38%), Gaps = 83/402 (20%)
Query: 77 GRCYTWGRNERGQLGH----------------------GDKIQRDRPTIVSELSKYKIKK 114
G+ YT+G RG+LG+ G +P+ V K KI +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV------------------ 156
G HT+ ++++G A+G +G LG G + P V
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVG 245
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ V T C A ++ ++ G G+LG G +
Sbjct: 246 KVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN--------------RG 291
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + + IV V G +H+ +D +G +YTWG GG+GRLGH +Q + VPR+V+
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVE 351
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMD 327
F VL ++ G+ ++ G ++ WG +G PK L D
Sbjct: 352 GFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD 407
Query: 328 LSGWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEG 383
+ L + +G H VG D + WG LG+G Q++ PK V D+
Sbjct: 408 IEAAVLN-IAAGPYHSAAVTVGGD--LLVWGVGGSSRLGHGD--QQNQPFPKYVADLRNR 462
Query: 384 MHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNE 425
M+V + S++ V R LDV D +S N+
Sbjct: 463 MYVSDL-----QSMLGVSRLK--REYSDLDVLDVPGTSGTNQ 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
+G +G+L SP + ++ DI FV AG H +D +G YTWG G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDIVFVNAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-----HGQLGSGSI 147
GD+ + P V + + G HT+ +T G A+G G+ GSG +
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM 398
Query: 148 ------RNEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ---YGQLG 196
++IE + + A G D VW V G+S L G Q + +
Sbjct: 399 VAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRA------IAALAGE-----TIVKVACGTNHTVAVD 245
N D L R + + +G T+ + CG +HT+A+
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516
Query: 246 SKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
G V+ WG G+LG E ++D++ P +++ F P I+ GS + A
Sbjct: 517 GAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFST-----PIRRIACGSKHCLAVAQY 571
Query: 304 GQLYMWGKLKN 314
G ++ WG N
Sbjct: 572 GDVFAWGANDN 582
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 143/394 (36%), Gaps = 105/394 (26%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL------------- 107
+AAG H AV V G WG +LGHGD+ + P V++L
Sbjct: 415 IAAG--PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSML 472
Query: 108 -------------------------SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
S + ++ G SHT+ +T G +G N GQL
Sbjct: 473 GVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQL 532
Query: 143 GSGSI--RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
G G ++ EP + C + + ACG+ L+ + + G GQLG G
Sbjct: 533 GLGEDVEEDQYEPVKLECFSTPIRRIACGSKHC--LAVAQYGDVFAWGANDNGQLGLGV- 589
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG------------ 248
V+ ++E P A+ AL V V CG +++ + S G
Sbjct: 590 ---------VRPSFE----PAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTE 634
Query: 249 --YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
++ WG G+LG E DV + + P + V S S + Q
Sbjct: 635 FGDLWAWGAAESGKLGLGE----------DVASGSILTPQKVVFSVPVCACSLDSLEMQA 684
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
Y K + +S + SG H + A C +WG YG LG G
Sbjct: 685 Y---------------KRVFCVS---FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIG 726
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
++ P + D +G+ + SVA G HSL +
Sbjct: 727 T--TANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 24/234 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DRPTIV 104
P LR L +FV C S H +A+ +GR ++WG N GQLG G + DRPT +
Sbjct: 472 PRILRHLASY--QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTEL 529
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
+ L + + G H+ +T G+ +G N GQLG G+ N+ P+ +R + S+ V
Sbjct: 530 TSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMV 589
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRPRA 222
ACG D T L++ G + G GQLGHG++ NE N PR
Sbjct: 590 KHIACGQDHTAMLTADGGVFLFGQG--SEGQLGHGSNYNEVN---------------PRK 632
Query: 223 IAALAGETIVKVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L G I +V CG +HT+ ++ SKG +Y +G G +G+LG E + P+RV
Sbjct: 633 VIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 115/222 (51%), Gaps = 22/222 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAG 116
+FV C S H +A+ +GR ++WG N GQLG G + DRPT ++ L + +
Sbjct: 142 QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 201
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
G H+ +T G+ +G N GQLG G+ N+ P+ +R + S+ V ACG D T
Sbjct: 202 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAM 261
Query: 176 LSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L++ G + G GQLGHG++ NE N PR + L G I +V
Sbjct: 262 LTADGGVFLFGQG--SEGQLGHGSNYNEVN---------------PRKVIDLMGSDITQV 304
Query: 235 ACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT+ ++ SKG +Y +G G +G+LG E + P+RV
Sbjct: 305 TCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 148/331 (44%), Gaps = 31/331 (9%)
Query: 80 YTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG + GQLG G + ++ V+ LS +++ G+ HT +V +DG G
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQL 195
N GQLG RN+ +P V L + V ACG D T+ +S + +L G GQ
Sbjct: 64 NSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVS--DRGQVLGWGRNDRGQC 119
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G T + E +PRPR + LA VKV CG+ H++A+ G +++WG
Sbjct: 120 GLATGD------------IENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGD 167
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
YG+LG + R ++ V P ++ G +S G ++ WGK
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGV--PLVRVACGGFHSFALTISGSVFGWGKNDVG 225
Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYG 368
N ++ YP L ++ ++ + G H + AD +G G+LG+G
Sbjct: 226 QLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHG--S 283
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P+KV L G + V CG H+LV+
Sbjct: 284 NYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 173/421 (41%), Gaps = 63/421 (14%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G L CG+ +G+ D N P ++ L V I+ VA G H +AV G+
Sbjct: 56 GTLYMCGANSKGQLGQ-----DRNQYKPVQVSALETVVIKHVACG--DDHTLAVSDRGQV 108
Query: 80 YTWGRNERGQ--LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
WGRN+RGQ L GD + RP I+ L+ Y+ K G H++ +T DG ++G N
Sbjct: 109 LGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDN 168
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+GQLG G++ P L S + ACG F + ++ G S+ G G
Sbjct: 169 TYGQLGIGTLVTNYTDRPTE-LTSLRGVPLVRVACGG-FHSFALTISG-SVFGWGKNDVG 225
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLG G E + P + + + + +ACG +HT + + G V+ +
Sbjct: 226 QLGLGNK--------------ENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 271
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWGK- 311
G G G+LGH +E PR+V +++ ++ G ++ G G+LY +G+
Sbjct: 272 GQGSEGQLGHGSNYNEVNPRKVIDLMGSDI----TQVTCGKHHTLVLEGSKGRLYAFGQG 327
Query: 312 ---------LKNNGDDWMYPKPLMDLS---------GWNLRCMDSGNMHHFV----GADS 349
++ + P P + S G +RC+ +G H F AD
Sbjct: 328 IHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADD 387
Query: 350 SCISWGHAQ-----YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
I + +L LE + + VACG H+L + DR
Sbjct: 388 IQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQ 447
Query: 405 V 405
V
Sbjct: 448 V 448
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 31/316 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R + C H V +G Y G N +GQLG D+ Q +P VS L IK G
Sbjct: 38 RVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ-DRNQY-KPVQVSALETVVIKHVACG 95
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQ--LGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
HT+ V++ G L +G N GQ L +G I N+ P ++ L S + CG+ ++
Sbjct: 96 DDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMA 155
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G YGQLG GT L RP + +L G +V+VA
Sbjct: 156 LT--RDGRLFSWGDNTYGQLGIGT------------LVTNYTDRPTELTSLRGVPLVRVA 201
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG H+ A+ G V+ WG G+LG ++++ P + RN I+ G
Sbjct: 202 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLL----RNMRSQMVKHIACGQD 257
Query: 296 NSSCTAGGGQLYMWGK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFV--GA 347
+++ G ++++G+ +G ++ + P+ ++DL G ++ + G H V G+
Sbjct: 258 HTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGS 317
Query: 348 DSSCISWGHAQYGELG 363
++G +G+LG
Sbjct: 318 KGRLYAFGQGIHGQLG 333
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ--LGHGDKIQRDRPTIVSELSKYKIK 113
V I+ VA G H +AV + WGRN+RGQ L GD + RP I+ L+ Y+
Sbjct: 427 VVIKHVACG--DDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFV 484
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTATACG 169
K G H++ +T DG ++G N +GQLG G++ P L S + ACG
Sbjct: 485 KVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE-LTSLRGVPLVRVACG 543
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
F + ++ G S+ G GQLG G E + P + + +
Sbjct: 544 G-FHSFALTISG-SVFGWGKNDVGQLGLGNK--------------ENKSYPTLLRNMRSQ 587
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ +ACG +HT + + G V+ +G G G+LGH +E PR+V +++
Sbjct: 588 MVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDI----TQ 643
Query: 290 ISAGSVNSSCTAGG-GQLYMWGK 311
++ G ++ G G+LY +G+
Sbjct: 644 VTCGKHHTLVLEGSKGRLYAFGQ 666
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 25/244 (10%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG D T+ +S + +L G GQ G T + E +PRPR
Sbjct: 429 IKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGLATGD------------IENKPRPRI 474
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ LA VKV CG+ H++A+ G +++WG YG+LG + R ++
Sbjct: 475 LRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRG 534
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCM 336
V P ++ G +S G ++ WGK N ++ YP L ++ ++ +
Sbjct: 535 V--PLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHI 592
Query: 337 DSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G H + AD +G G+LG+G + P+KV L G + V CG H
Sbjct: 593 ACGQDHTAMLTADGGVFLFGQGSEGQLGHG--SNYNEVNPRKVIDLMGSDITQVTCGKHH 650
Query: 396 SLVI 399
+LV+
Sbjct: 651 TLVL 654
>gi|397645356|gb|EJK76793.1| hypothetical protein THAOC_01428 [Thalassiosira oceanica]
Length = 371
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 144/326 (44%), Gaps = 56/326 (17%)
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVS---------EVTATACGADFTVWLSSVEGASIL 185
G H G G I+ + RC+V+ + ACG + + LSS +
Sbjct: 15 GHTLHSGQGGGEIK---AATTTRCVVAGDGDGDDGVRIVKAACGQEVSALLSST--GQLF 69
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA----------------ALAGE 229
AG ++GQLG+G EY + A A+ R++ A +
Sbjct: 70 TAGSSEFGQLGNGETGEYIIAAGRLGYANCAKFLRRSVFVQSESDRDGNLSTSTEAATSK 129
Query: 230 TIV----------KVACGTNHTVAVDSKGY-------VYTWGFGGYGRLGHREQKDEWVP 272
T+ ++ G +H VAV++ V+TWG G YG LGH Q DE+ P
Sbjct: 130 TVTLPDSFDICLSDISGGKHHFVAVEAPSSDPSHVPRVFTWGCGDYGCLGHGVQADEYSP 189
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCT---AGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
R V F R V S SV S+CT GQ+Y GK KNN + M P + L+
Sbjct: 190 RMVAGF-RGPVFASNHPAST-SVGSNCTLVLTRNGQVYYSGKHKNNSEATMRPAVIDALA 247
Query: 330 --GWNLRCMDSGNMHHFVGADSSC-ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
G + + +GN F S +SWGH GELGYG +KSSA P V+ L+ V
Sbjct: 248 NNGHVVTSVGAGNQTVFCCTRSGVTVSWGHGSLGELGYGAGDKKSSAAPNFVNALDSCLV 307
Query: 387 ISVACGYGHSLVIVDRTNVGERLDQL 412
SV+CG GH+L I+ R + GE L
Sbjct: 308 TSVSCGMGHTLFII-RNDDGEDAKAL 332
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 33/333 (9%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG G+LG G ++ Q P + +++A G SHT+++T+DG G N
Sbjct: 4 YCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNN 63
Query: 138 KHGQLG--SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
HGQLG + ++ N+ P + L + VT +CG ++ L++ + + G GQ
Sbjct: 64 DHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTN--WGQLFSWGSNATGQ 120
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGH D ++Y P PR I ++A +T+V+++CG +H +A+ + G ++ WG
Sbjct: 121 LGHDLD----------MVSY---PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
YG+LG + VP V + P A I+ G +S + G ++ WGK
Sbjct: 168 ANEYGQLGLGTTGKK-VPTATLVKSLAGI--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
N+ D YP L L +R + G + F+ + + G +G+LG+G +
Sbjct: 225 GQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G + +P+ V L G + +ACG H+L V
Sbjct: 285 GNE--ILPRMVFELMGSKITQIACGRKHTLAFV 315
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
V C HC+A+ G + WG NE GQLG G ++ T+V L+ I G
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H+ V++ G +G N GQLG + + P+ ++ L S V +CG DF+V+L+
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G + GL +GQLGHGT + PR + L G I ++ACG
Sbjct: 265 EGG--VFTCGLGTFGQLGHGTHGN--------------EILPRMVFELMGSKITQIACGR 308
Query: 239 NHTVA-VDSKGYVY 251
HT+A V S+G VY
Sbjct: 309 KHTLAFVPSRGKVY 322
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+ T ++ L G+ I F+A G H AV G + WG+N GQLG D R PT +
Sbjct: 185 TATLVKSLAGIPIAFIACG--GNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLK 242
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ G +V +T++G G GQLG G+ NEI P V L+ S++T
Sbjct: 243 TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKIT 302
Query: 165 ATACGADFTV 174
ACG T+
Sbjct: 303 QIACGRKHTL 312
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 162/356 (45%), Gaps = 34/356 (9%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L GV +AAG H AV +G + WG N+ GQLG G + R P +
Sbjct: 99 TPVQVPGLTGVTA--IAAG--RRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLP 154
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
EL+ + AGR HT V +DG A+G N GQLG G+ N + P V L + VTA
Sbjct: 155 ELTG--VTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGL-TGVTA 211
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T L+ + ++ G GQLG GT Y + P +
Sbjct: 212 IAAGDYHT--LAVRQDGTVWAWGNNALGQLGDGT--------------YTERLTPVQVPG 255
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G + ++ G +HTVAV G V+ WG +G+LG + D P +V +
Sbjct: 256 LTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI- 312
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
E +V T L WG+L + D + P + DL+ ++ + +G+ H
Sbjct: 313 AEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT--SVTAIAAGDYHTL 370
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V D + +WG +G+LG G Y + + P +V L G V ++A G H++ +
Sbjct: 371 AVRQDGTVWAWGDNVWGQLGDGTYTDRLT--PVQVPGLTG--VTAIAAGESHTVAM 422
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 167/371 (45%), Gaps = 59/371 (15%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P ++ L GV +AAG H VA+ +G + WG N GQLG G R P V
Sbjct: 398 LTPVQVPGLTGVTA--IAAG--ESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQV 453
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----V 160
+L+ + AG HT+ V +DG A+G+N +GQLG G+ + PSPV V
Sbjct: 454 PDLTS--VTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGT--SSRSPSPVMVPGLTGV 509
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A A G TV + ++ ++ GL GQLG G T D + P
Sbjct: 510 TVFAALAAGDSHTV--AVMQDGTVWAWGLNASGQLGDGA-----TIDRRI---------P 553
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
I LAG + +A G+ HT+A G V++WG YG+LG P +V
Sbjct: 554 VQIPGLAG--VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVP---- 607
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW-----------MYPKPLMDLS 329
L + ++AG +S G + WG+ + W + P + L+
Sbjct: 608 --GLTGVSAMAAGDAHSVALLQDGTVSAWGR-----NSWGQLGDGTTAARLTPVQVHGLT 660
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + +G++H + D + +WG+ G+LG G ++ + P +V L V +
Sbjct: 661 G--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLA--PVQVQGLT--DVTA 714
Query: 389 VACGYGHSLVI 399
+A GY H++ +
Sbjct: 715 IAAGYFHTVAV 725
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 146/338 (43%), Gaps = 40/338 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H VAV +G + WG N GQLG G + R P V L+ + AGR HT V +D
Sbjct: 18 HTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTG--VTAVAAGRHHTFAVRQD 75
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N GQLG G+ P V L + VTA A G T + + ++ G
Sbjct: 76 GTVWAWGLNVWGQLGDGTHTERHTPVQVPGL-TGVTAIAAGRRHT--FAVSQDGTVWAWG 132
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+GQLG GT + +T P + L G + +A G HT AV G
Sbjct: 133 DNDWGQLGDGTRADRHT--------------PVQLPELTG--VTAIAAGRRHTFAVRQDG 176
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG +G+LG + + P +V L I+AG ++ G ++
Sbjct: 177 TVWAWGDNAWGQLGDGTRTNRLTPVQVP------GLTGVTAIAAGDYHTLAVRQDGTVWA 230
Query: 309 WGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
WG L GD + + P + L+G + + +G H V D + +WG +G+
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQ 288
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G + P +V L G V ++A G H+ +
Sbjct: 289 LGDGT--RTDRLTPVQVPGLSG--VTAIAEGRRHTFAV 322
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV +AAG S H +A +G ++WG N GQLG G R P V
Sbjct: 553 PVQIPGLAGVTA--IAAG--SAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPG 608
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + AG +H+V + +DG A+G N GQLG G+ + P V L + VTA
Sbjct: 609 LTG--VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGL-TGVTAV 665
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ TV L + ++ G GQLG GT ++ +LA P + L
Sbjct: 666 AAGSLHTVALR--QDGTVWAWGYNDLGQLGDGT--------TTRRLA------PVQVQGL 709
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+ +A G HTVAV G V+ WG+ +G+LG P +V L
Sbjct: 710 --TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQV------QELTG 761
Query: 287 EAVISAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN 340
+ ++AG ++ G ++ WG +L N + D P + L+G + + +G
Sbjct: 762 VSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTG--VSALTAGR 819
Query: 341 MHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
H V + +WG +G++G G + P+ VD++
Sbjct: 820 FHTAAVSPEGFGWAWGRNNFGQVGDGTTADR----PRPVDVV 857
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 133/295 (45%), Gaps = 38/295 (12%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ AG HTV V +DG + A+G N GQLG G+ + + P V L + VTA A G
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGL-TGVTAVAAGRH 67
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T + + ++ GL +GQLG GT E +T P + L G +
Sbjct: 68 HT--FAVRQDGTVWAWGLNVWGQLGDGTHTERHT--------------PVQVPGLTG--V 109
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+A G HT AV G V+ WG +G+LG + D P V + + V I+
Sbjct: 110 TAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTGV----TAIA 163
Query: 292 AGSVNSSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
AG ++ G ++ WG GD + + P + L+G + + +G+ H
Sbjct: 164 AGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG--VTAIAAGDYHTLA 221
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V D + +WG+ G+LG G Y ++ + P +V L G+ IS G H++ +
Sbjct: 222 VRQDGTVWAWGNNALGQLGDGTYTERLT--PVQVPGLTGVTAIS--AGESHTVAV 272
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +++ L D+ +AAG H VAV +G + WG N GQLG G R P V
Sbjct: 701 LAPVQVQGLT--DVTAIAAGY--FHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQV 756
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSE 162
EL+ + AG +HTV V +DG A+G N QLG+GS + P V L VS
Sbjct: 757 QELT--GVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVSA 814
Query: 163 VTA 165
+TA
Sbjct: 815 LTA 817
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 177/412 (42%), Gaps = 51/412 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV--AAGCVSCHCVAVDV 75
+ G++L G ++ G+ + ++ +P ++ L + I + A GC + ++ D
Sbjct: 89 RNGDVLTVG---FNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQD- 144
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED------- 128
G+ YT G N GQLGHG + PT+V L ++ H+++VT+D
Sbjct: 145 -GKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQ 203
Query: 129 -GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILN 186
+ G N +GQLG +EI P +R L +V TACG +V++ +V G + +
Sbjct: 204 QTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFV-TVHG-EVFS 261
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQLGH N +P I +L + IV+ ACG HT+
Sbjct: 262 CGFNDNGQLGHNDTKSRN--------------QPVLIESLKNKFIVQAACGYYHTLVRRD 307
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVN--------- 296
G +Y +G G+LG + P+++ F + S G+ N
Sbjct: 308 TGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF----LTVSNIQHSGGNQNQLHSGQEHN 363
Query: 297 --SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCIS 353
SS + G M G ++N + P+ N+ + G H +S +
Sbjct: 364 QPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFT 423
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G +G+LG G + +PK+V L VI +A G+ H++V+V + V
Sbjct: 424 FGRGNHGQLGQG--NTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 166/379 (43%), Gaps = 48/379 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P+++R +++ +AAG + H + G T G N GQLGHG+ P +
Sbjct: 63 PSQVRFFDEMNVTQIAAG--NEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIES 120
Query: 107 LSKYKIKKAGA--GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L +I + G + ++++DG G+N +GQLG G+ N P+ V+ L ++V
Sbjct: 121 LKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQV 180
Query: 164 TATACGADFTVWLS------SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
T +C ++ ++ S + ++ + G GQLG E+ + +
Sbjct: 181 TNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQ----EHTCHEIT-------- 228
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ I +L +++ ACG +H+V V G V++ GF G+LGH + K P ++
Sbjct: 229 --PKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIES 286
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL-- 328
+ ++ + G ++ G++Y +G+ ++ NG + PK + +
Sbjct: 287 LKNKFIVQA----ACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLT 342
Query: 329 ------SGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
SG N + SG H+ S S G + G ++ P+ + +
Sbjct: 343 VSNIQHSGGNQNQLHSGQEHN----QPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSK 398
Query: 383 GMHVISVACGYGHSLVIVD 401
+++ +ACG HS+ + +
Sbjct: 399 KVNISKIACGCYHSIALCE 417
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 150/371 (40%), Gaps = 72/371 (19%)
Query: 45 VSPTRLRP-LVGVDIRFV--AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
V RL P LV DI + A GC H A+ G YT+G N RGQLGHG P
Sbjct: 84 VQSLRLVPALVTEDIAHIRSANGCE--HLTAISRSGALYTFGFNSRGQLGHGSTNPITTP 141
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
T + +L+ Y + + HT+V+T +G AFG N GQLG + P P+ S
Sbjct: 142 TKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNS 201
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V A ACG TV S+ N G+ +G+ HG T D Y A P
Sbjct: 202 RPVLAVACGQHHTV-------VSLTNGGVVAFGKNDHGQLGTGYTLD------YHASPSL 248
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
A A L + +ACG HT+A+ G VY++G YG+LGH + P + +
Sbjct: 249 LA-APLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAK 307
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
+ A V C + L + D +YP
Sbjct: 308 TH---------AVQVTCGC---------YHTLVLSEDGKVYP------------------ 331
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+G +G+LG G +S P+ + L V+ VA G+ HS+ +
Sbjct: 332 -------------FGRNNHGQLGLGNLIDCTS--PQIIASLRDKFVVKVASGFYHSICLT 376
Query: 401 DRTN-VGERLD 410
N VG R+D
Sbjct: 377 ATKNSVGSRMD 387
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 32/304 (10%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
+A + + E T + G L G +++ G+ + +PT+++ L +
Sbjct: 98 IAHIRSANGCEHLTAISRSGALYTFG---FNSRGQLGHGSTNPITTPTKIKDLASYHV-- 152
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H + + +EG Y +GRN+ GQLG D + R P ++ + + G+
Sbjct: 153 VEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQH 212
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPS----PVRCLVSEVTATACGADFTVW 175
HTVV +G +AFG N HGQLG+G ++ PS P+ LV V + ACG T+
Sbjct: 213 HTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLV--VPSLACGYYHTIA 270
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ E S+ + G YGQLGHG + + P I ALA V+V
Sbjct: 271 LA--EHGSVYSFGRNDYGQLGHGHRHHLS--------------EPTLIKALAKTHAVQVT 314
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG HT+ + G VY +G +G+LG D P+ + + V+ +++G
Sbjct: 315 CGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVK----VASGFY 370
Query: 296 NSSC 299
+S C
Sbjct: 371 HSIC 374
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 138/333 (41%), Gaps = 36/333 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y++G+N G+L H D + R PT +S KI G T + E G+ G+N
Sbjct: 14 YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE-GASILNAGLPQYGQLGHG 198
GQ G GS V LV+E A A+ L+++ ++ G GQLGHG
Sbjct: 74 GQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG 133
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ N T P I LA +V+VAC HT+ + +G +Y +G
Sbjct: 134 STNPITT--------------PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDL 179
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------- 311
G+LG + D VP + F VL ++ G ++ + G + +GK
Sbjct: 180 GQLGIDDGMDRHVPVPLTYFNSRPVL----AVACGQHHTVVSLTNGGVVAFGKNDHGQLG 235
Query: 312 ----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
L + + PL L +L C G H A+ S S+G YG+LG+G
Sbjct: 236 TGYTLDYHASPSLLAAPLDSLVVPSLAC---GYYHTIALAEHGSVYSFGRNDYGQLGHGH 292
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S P + L H + V CG H+LV+
Sbjct: 293 RHHLSE--PTLIKALAKTHAVQVTCGCYHTLVL 323
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 32/284 (11%)
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+FG N +G+L + P+P+ C ++ ACG + T +L E + G
Sbjct: 15 SFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFL--FETGDVFTCGYND 72
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI--VKVACGTNHTVAVDSKGY 249
GQ G G+ + + R + AL E I ++ A G H A+ G
Sbjct: 73 SGQCGIGSTSRVQSL--------------RLVPALVTEDIAHIRSANGCEHLTAISRSGA 118
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YT+GF G+LGH P ++ +V+ ++ ++ G LY +
Sbjct: 119 LYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVE----VACSYFHTIVMTMEGTLYAF 174
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGEL 362
G+ ++G D P PL + + + G H V + +++G +G+L
Sbjct: 175 GRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQL 234
Query: 363 GYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVIVDRTNV 405
G G Y A P + L+ + V S+ACGY H++ + + +V
Sbjct: 235 GTG-YTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSV 277
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L PT ++ L V GC H + + +G+ Y +GRN GQLG G+ I P
Sbjct: 295 HLSEPTLIKALAKTHAVQVTCGCY--HTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQ 352
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
I++ L + K +G H++ +T NS+
Sbjct: 353 IIASLRDKFVVKVASGFYHSICLTATKNSV 382
>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1294
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 43/345 (12%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRS 120
VSC H + G YT G NE G+LG K P +V +LSK K G+S
Sbjct: 63 VSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCLVEDLSKIKCLSLSCGQS 122
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HT+ V ++G +G +GQLG+GS + P+ + +E CG+ T+ L +
Sbjct: 123 HTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSENNEFIQVQCGSRHTILLDLKK 182
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
A + G + GQLG + + ++L I L + ++ ACG H
Sbjct: 183 KAYV--CGSNENGQLG--------LRSTKIEL---------FIKKLDNKGFIEAACGQFH 223
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
++ +D +G VY+ G +G+LG + +++ F + N L E + I+AGS +S+
Sbjct: 224 SLLLDEQGRVYSTGANSFGQLGIGTKNNQY------EFTQINSLEGEQIVKIAAGS-HSA 276
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVGA---DSSCISW 354
G++Y+WG ++++P + SG + GN F A + + +W
Sbjct: 277 ALNKKGEMYIWG--TGVFGEYLFPNKINRHSSGTTFSDISVGNF--FAAAVDINGAVWTW 332
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G GELG G Y K+ +P+ + L+G HV + CG G ++ +
Sbjct: 333 GANSNGELGQGDYEPKT--LPQTLQALKGRHVQKICCGGGFAMAL 375
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+PTR+ V + F+ C S H + +D++ + Y G NE GQLG KI+
Sbjct: 153 FAPTRI---VSENNEFIQVQCGSRHTILLDLKKKAYVCGSNENGQLGLRSTKIE----LF 205
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
+ +L +A G+ H++++ E G + G N GQLG G+ N+ E + + L E
Sbjct: 206 IKKLDNKGFIEAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQ 265
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPR 219
+ A G+ +A L + G++ G G EY
Sbjct: 266 IVKIAAGSH--------------SAALNKKGEMYIWGTGVFGEY--------------LF 297
Query: 220 PRAIAAL-AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I +G T ++ G AVD G V+TWG G LG + + + +P+ +
Sbjct: 298 PNKINRHSSGTTFSDISVGNFFAAAVDINGAVWTWGANSNGELGQGDYEPKTLPQTLQAL 357
Query: 279 Q 279
+
Sbjct: 358 K 358
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
F+ A C H + +D +GR Y+ G N GQLG G K + T ++ L +I K AG
Sbjct: 214 FIEAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAG- 272
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
SH+ + + G +G G G N+I S+++ +F +
Sbjct: 273 SHSAALNKKGEMYIWGT---GVFGEYLFPNKINRHSSGTTFSDISV----GNFFAAAVDI 325
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
GA + G G+LG G YE + P+ + AL G + K+ CG
Sbjct: 326 NGA-VWTWGANSNGELGQGD--------------YEPKTLPQTLQALKGRHVQKICCG 368
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 73/266 (27%)
Query: 137 NKHGQLGSGSI---RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+K+GQLG G +N P + C + +CG + + +++ + I G + G
Sbjct: 32 DKYGQLGLGHKHQGKNYTIP-KICCYNLIIRTVSCGEEHSAFIT--QRGHIYTIGSNEDG 88
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LG T + + P + L+ + ++CG +HT+AV G VY W
Sbjct: 89 KLGISTK------------SITSSSTPCLVEDLSKIKCLSLSCGQSHTIAVMQNGEVYGW 136
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G G YG+LG+ Q+ + P R+ V + N + + GS ++
Sbjct: 137 GDGSYGQLGNGSQESRFAPTRI-VSENNEFIQ----VQCGSRHT---------------- 175
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
L+DL C G + G+LG +S+
Sbjct: 176 ----------ILLDLKKKAYVC-------------------GSNENGQLGL-----RSTK 201
Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
+ + L+ I ACG HSL++
Sbjct: 202 IELFIKKLDNKGFIEAACGQFHSLLL 227
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
SP + L G+ + VA G S H AV +G+ YTWG + GQLGHGD P +
Sbjct: 21 SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRL 80
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
+ L I + G +HTVVV++ G A+GW GQLG GS N +P V L +
Sbjct: 81 IVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVK 140
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG+ T ++ E + G GQLGHG D +Q RP
Sbjct: 141 VCKVACGSAHTAVVT--ESGHVYTWGWGVNGQLGHGDD--------------ASQSRPMY 184
Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L G + +ACG HTV V + V++WG+ YG+LGH W D+F N
Sbjct: 185 VKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH----GGW-----DIFGGN 235
Query: 282 NVLPPEAV-----ISAGSVNSSCTAGGGQLYM--WGK 311
P + I+ GS + + G +Y WGK
Sbjct: 236 KNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGK 272
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 20/222 (9%)
Query: 43 NLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
NLV P R +VG+ V C S H V V G + WG GQLG G + P
Sbjct: 74 NLVLP---RLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDP 130
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V+ L K+ K G +HT VVTE G+ +GW +GQLG G ++ P V+ L
Sbjct: 131 VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHG 190
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V+ ACG TV +S V+ A + + G +YGQLGHG + + + PRP
Sbjct: 191 IYVSTLACGLAHTVVVSEVDRA-VFSWGWDEYGQLGHGGWDIFGGNKNR-------SPRP 242
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ + ++ACG+++T+A+ S+G VY +G+G G+LG
Sbjct: 243 I-------KDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS--VEGASILNAG 188
++G+N G LG G+ P P+ L V + ACG S+ E + G
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ GQLGHG PR I L IV+VACG+ HTV V G
Sbjct: 61 SGKSGQLGHGDSQNL--------------VLPRLIVGLQSNPIVEVACGSAHTVVVSKAG 106
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG+G +G+LG + P +V V ++ GS +++ G +Y
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCK----VACGSAHTAVVTESGHVYT 162
Query: 309 WGKLKN----NGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYG 360
WG N +GDD +P+ L G + + G H V + D + SWG +YG
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYG 222
Query: 361 ELGYG---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+LG+G +G + P+ + L+ +ACG ++L + R +V
Sbjct: 223 QLGHGGWDIFGGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDV 265
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 47/346 (13%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V G ++G + GHGD + + RP V L++ +++ AG H++V T+DG L+F
Sbjct: 76 VAGNVVSFGLADPS--GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSF 133
Query: 135 GWNK-----HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
G+ G+LG G R ++ P PV L + A GA ++ LS + ++ + G
Sbjct: 134 GYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLS--DQGNVFSFG 191
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G LGHG D + +L P+ I++L E +V +A G+ H++ V G
Sbjct: 192 VGIDGSLGHG--------DQARQLV------PKLISSLQREKVVDIAAGSAHSLVVAESG 237
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY++G G G LGH + VP++++ F V P ++AG +S + +LY+
Sbjct: 238 DVYSFGLGSEGALGHGDTDMSLVPKKIEHF----VQRPAVKVAAGGSHSLVLS---KLYV 290
Query: 309 --------------WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCIS 353
+G+L M P +++G H V D S
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYS 350
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G AQ+G+LG+G + + P + LE ++ VA G SLV+
Sbjct: 351 FGLAQHGQLGHG-NDLRDNPEPTLIQSLERERIVDVAAGNNFSLVL 395
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 32/310 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV I VAAG + H + + +G +++G G LGHGD+ ++ P ++S
Sbjct: 157 PRPVLSLSGVRIVKVAAG--AHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISS 214
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K+ AG +H++VV E G+ +FG G LG G + P + V
Sbjct: 215 LQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274
Query: 166 TACGADFTVWLSSV----EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G ++ LS + + +L+ G YGQLG G S +A AQ +
Sbjct: 275 VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG--------HFSRMIASPAQVQVE 326
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
A A V++ G +H++ + + G VY++G +G+LGH + +D P + +R
Sbjct: 327 AAA-------VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLER 379
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDL-SGWNLRC 335
++ ++AG+ S + G ++ +G KN GD+ +P + +G +
Sbjct: 380 ERIVD----VAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSA 435
Query: 336 MDSGNMHHFV 345
+ +G H V
Sbjct: 436 ISAGYSHSLV 445
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 186/429 (43%), Gaps = 64/429 (14%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVS-----PT-------RLRP---- 52
+V++E G LF DAV R++ + GN+VS P+ +LRP
Sbjct: 46 LVDKELMFLIFGPDLFTWKDLPDAVLRQQ-LVAGNVVSFGLADPSGHGDHVDKLRPKCVE 104
Query: 53 -LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER-----GQLGHGDKIQRDRPTIVSE 106
L +R V+AG H + +G ++G G+LGHGD+ + P V
Sbjct: 105 ALARERVRDVSAGL--YHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLS 162
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
LS +I K AG H++V+++ GN +FG G LG G ++ P + L E V
Sbjct: 163 LSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVD 222
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ ++ ++ E + + GL G LGHG D+ + L P+ I
Sbjct: 223 IAAGSAHSLVVA--ESGDVYSFGLGSEGALGHG--------DTDMSLV------PKKIEH 266
Query: 226 LAGETIVKVACGTNHTV------AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
VKVA G +H++ ++ +G V ++G YG+LG R +
Sbjct: 267 FVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGH-----FSRMIASPA 321
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLR 334
+ V I AG+ +S G++Y + G+L + D P+P + S R
Sbjct: 322 QVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERER 381
Query: 335 CMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+D N + A+ + S+G + G LG G +S+A V G V +++
Sbjct: 382 IVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLG---KGDESNATQPTVVFAAGHTVSAISA 438
Query: 392 GYGHSLVIV 400
GY HSLV+V
Sbjct: 439 GYSHSLVVV 447
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 66/250 (26%)
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ G D W + +A L Q QL G + D S + + RP+
Sbjct: 50 ELMFLIFGPDLFTW------KDLPDAVLRQ--QLVAGNVVSFGLADPSGHGDHVDKLRPK 101
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY-----GRLGHREQKDEWVPRRVD 276
+ ALA E + V+ G H++ G + ++G+G GRLGH +Q+ +
Sbjct: 102 CVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQ------- 154
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
M P+P++ LSG + +
Sbjct: 155 -------------------------------------------MIPRPVLSLSGVRIVKV 171
Query: 337 DSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
+G H V +D + S+G G LG+G Q +PK + L+ V+ +A G H
Sbjct: 172 AAGAHHSLVLSDQGNVFSFGVGIDGSLGHGD--QARQLVPKLISSLQREKVVDIAAGSAH 229
Query: 396 SLVIVDRTNV 405
SLV+ + +V
Sbjct: 230 SLVVAESGDV 239
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + +++ G HT+ +T +G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSN 67
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
H QLG P+ L+ E + +CG+ ++ LS + +L+ G
Sbjct: 68 DHSQLGHDL------PTKRPLLIPELQDYVIIQISCGSRHSLALS--DWGQVLSWGDNDC 119
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGH TD E P+ + L +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKE-------------IMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
WG YG+LG KD P R+ + P A I+ G +S + G ++ W
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
G+ N+ + YP L L +R + G+ F+ + + G YG+L
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+ V L G + VACG H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTI 103
P +R LV + V C + H +A+ G Y+WG N GQLG D + P
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLR 191
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
++ L + G +H+ ++++ G +G N GQLG N P+ ++ L +
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG +F+V+L++ G AG YGQLGHG + + PR
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN--------------EMLPRM 295
Query: 223 IAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L G TI +VACG HT+A V S+G VY +G G G+LG R K +P+ V
Sbjct: 296 VMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 165/372 (44%), Gaps = 39/372 (10%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVE 76
G+ L+C GST +G G D +++P+++ P V+ C H + +
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVE----QVACGHRHTLFLTAN 58
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ Y G N+ QLGH + RP ++ EL Y I + G H++ +++ G L++G
Sbjct: 59 GKVYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 137 NKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG + + ++ P VR LVS+ V ACG + ++ L+S + + G YGQ
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQ 174
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG N+ Y P + L G + +ACG NH+ + G V+ WG
Sbjct: 175 LG------VNSPKDLTHCNY-----PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----W 309
G+LG ++ + P ++ + V ++ G S G ++ +
Sbjct: 224 RNNCGQLGLNDETNRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 310 GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGP 366
G+L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 280 GQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GT 337
Query: 367 YGQKSSAMPKKV 378
KS +P+ V
Sbjct: 338 RSTKSLMLPQVV 349
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 167/382 (43%), Gaps = 46/382 (12%)
Query: 28 TCWDAVGRRKGALDGNLVSPTRL-RPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
T W A G L S R+ +VG+ D VAAG S H +A+ +G + WG N
Sbjct: 52 TVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVLVAAG--SSHSLAIRSDGTAWAWGHN 109
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
G+LG G +R RP V+ LS+ + AG G H++VV DG A+GWN GQLG G
Sbjct: 110 GSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDG--HSLVVRSDGTVWAWGWNSDGQLGDG 167
Query: 146 SIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+ R P V L V A G V L ++ G GQLG GT +
Sbjct: 168 TTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD----GTVWAWGRNDSGQLGDGTTVQ-- 221
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
+ P +A L+G +V VA G++H++AV S G V+ WG G+LG
Sbjct: 222 ------------RSAPVQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDG 267
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM-- 320
P +V L ++AG +S G ++ WG+ GD M
Sbjct: 268 TTSARLTPVQV------TGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTA 321
Query: 321 --YPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + LS + +G H V +D + +WG+ G+ G G K+S P +
Sbjct: 322 SLTPVQAIGLS--EGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGS--AKTSTAPVQ 377
Query: 378 VDILEGMHVISVACGYGHSLVI 399
V L G +VA G H+L +
Sbjct: 378 VTALSGG--FTVAAGKAHALAV 397
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 164/378 (43%), Gaps = 65/378 (17%)
Query: 41 DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
DG V +P ++ L GV VA S H +AV +G + WGRN GQLG G
Sbjct: 216 DGTTVQRSAPVQVAGLSGV----VAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V+ LS AG H++ V DG A+G N GQLG GS+ + +PV+
Sbjct: 272 RLTPVQVTGLSGGV--AVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASL--TPVQ 327
Query: 158 CL-VSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ +SE A A G +D TVW G + E D
Sbjct: 328 AIGLSEGEAVAAGETHSLVARSDGTVW--------------------AWGNNIEGQRGDG 367
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
S K + P + AL+G VA G H +AV S G V+ WG +G+LG +
Sbjct: 368 SAKTSTA----PVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQ 421
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP 324
P +V L ++AG +S G ++ WG+ + +G P P
Sbjct: 422 RTAPVQV------TGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP 475
Query: 325 L--MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ +LSG + + +G H V +D + +WG G+LG G ++ P +V L
Sbjct: 476 VQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGT--TRARLTPVQVAGL 531
Query: 382 EGMHVISVACGYGHSLVI 399
G V++VA GY HSL +
Sbjct: 532 SG--VVAVAAGYFHSLAV 547
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 121/275 (44%), Gaps = 31/275 (11%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSC----HCVAVDVEGRCYTWGRNERGQLGHGDK 95
L G L TR++ V + ++ G H + + ++G + WG+N GQLG G
Sbjct: 410 LFGQLGDGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTT 469
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
QR P V+ELS + AG SH++ V+ DG A+G N GQLG G+ R + P
Sbjct: 470 AQRPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQ 527
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
V L S V A A G + L+ ++ G + QLG GT+ +
Sbjct: 528 VAGL-SGVVAVAAGYFHS--LAVRSDGTVWAWGNNSFFQLGDGTNTQ------------- 571
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+P P + L+G V A G H++ + S G V+ WG YG+LG+ + P +V
Sbjct: 572 -RPTPVRVPGLSGG--VAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQV 628
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
L ++AG S G + WG
Sbjct: 629 ------TGLSGGVAVAAGDFQSLAVRSDGTVRAWG 657
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P R+ L G I ++ G H +G ++WG N QLG+G P +V
Sbjct: 63 IEPRRIDALCGKKIVSLSYG-TGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
S L ++ + G HT+ +T DG A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 122 STNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ V ACG + ++ ++ I G GQLG G + Q
Sbjct: 180 NKAVVNIACGQLCS--MAVLDSGEIYGWGYNCNGQLGLGNNGN--------------QQT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P IAAL G ++++VACG HT+A+ +G+VY WG YG+LG + ++ +P ++ +
Sbjct: 224 PCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPTLINTDK 283
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
E S S+ GQ+ MWG+ +
Sbjct: 284 ER---MAEVAACHTSHTSAAKTQSGQVLMWGQCR 314
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 67/288 (23%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + VT + A G N G LG G +++ IEP + L ++ + + G V
Sbjct: 28 GSAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHV 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
+++ +G + + G Y QLG+GT N T P ++ L G+ +++
Sbjct: 88 AIATADG-EVFSWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLGKRVIE 132
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VACG++HT+A+ + G V+ WG+ G++G ++ PRRV +N +
Sbjct: 133 VACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAV--------- 183
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
VN +C GQL ++ +DSG ++
Sbjct: 184 -VNIAC----GQL------------------------CSMAVLDSGEIY----------G 204
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
WG+ G+LG G G + + P ++ L+G+ VI VACGY H+L + D
Sbjct: 205 WGYNCNGQLGLGNNGNQQT--PCRIAALQGVSVIQVACGYAHTLALTD 250
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 33/331 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+V+P + PL + I ++ H + + ++WG E G+LGHGDK+ + P
Sbjct: 3842 NIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPR 3901
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
+ L +I G SH+ +T G +G ++G+LG G + ++P + L S
Sbjct: 3902 KIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSY 3961
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG+ L+ + + + G YG+LG G + +P
Sbjct: 3962 KVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG--------------GSDGCKKPL 4007
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L G + KV CG+ +VA+ G +YTWG G Y RLGH PR+V Q
Sbjct: 4008 RIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGK 4067
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLM--DLSGWNLRC 335
++ ++AGS++ G+++ WG NG P+P + L L
Sbjct: 4068 QIV----TVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNR 4123
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
+ G+ H F +W ++GY P
Sbjct: 4124 VGCGSAHSF--------AWSTEAPIDIGYMP 4146
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 152/356 (42%), Gaps = 35/356 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
N+ P +L L ++ FV V H + + EG+ ++WG G+LGHGD R
Sbjct: 2941 NISIPVQLDTL---NMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRL 2997
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
PT++ L I + G SH+ VT DG +G +G+LG G + P V+ L
Sbjct: 2998 SPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKAL 3057
Query: 160 VS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V ACG+ L+ + + + G +G+LG G N
Sbjct: 3058 QDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI------------- 3104
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-V 277
P+ I AL G + ++ACG ++A+ + G V+TWG G Y RLGH P+ ++
Sbjct: 3105 -PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGP 3163
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNL 333
++ + I+ G+++ G++Y WG + NG+ + +P + L
Sbjct: 3164 LKKKRI----TEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGE--- 3216
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+D + H S I+W + Y P S P ++ ++++
Sbjct: 3217 --LDGVKISHIACGSSHSIAWCGNLQLTVSYVPVPMLSVKDPLGSSFMKDNEIMAI 3270
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 142/332 (42%), Gaps = 74/332 (22%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D++ R + WG N++GQLG G K++ PT + ++ + G +VT DG
Sbjct: 2866 DIDSRVFVWGLNDKGQLGGCKGSKVKS--PTEMKNIAALRPVSIAGGSKTVFIVTYDGKV 2923
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNA 187
G +G+LG G+ N P + L V +VT G L + +
Sbjct: 2924 YVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHS---LCITREGKVFSW 2980
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG D + +L+ P I AL + IV++ACG++H+ AV +
Sbjct: 2981 GEGIDGKLGHG--------DVTSRLS------PTLIEALESKLIVEIACGSSHSAAVTAD 3026
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G +YTWG G YGRLGH + K +P++V Q V+ I+ GS ++ A
Sbjct: 3027 GELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVID----IACGSRDAQTLA------ 3076
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
L +N W SWG +G+LG G
Sbjct: 3077 ----LTDNNCVW---------------------------------SWGDGDFGKLGRG-- 3097
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + +P+K+D L G V +ACG SL +
Sbjct: 3098 GSEGCNIPQKIDALCGRDVCRIACGAQFSLAL 3129
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SPT ++ + + +A G + V D G+ Y G G+LG G+ P +
Sbjct: 2892 SPTEMKNIAALRPVSIAGGSKTVFIVTYD--GKVYVSGEGANGRLGLGNTENISIPVQLD 2949
Query: 106 ELSKYKIKKAGA--GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
L+ + +KK G H++ +T +G ++G G+LG G + + + P+ + L S+
Sbjct: 2950 TLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKL 3009
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG+ + +++ + GL YG+LGHG + P+
Sbjct: 3010 IVEIACGSSHSAAVTA--DGELYTWGLGDYGRLGHGDSKTLHI--------------PKQ 3053
Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ AL ++ +ACG+ T+A+ V++WG G +G+LG + +P+++D
Sbjct: 3054 VKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCG 3113
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM---DLSGWNL 333
+V I+ G+ S + G+++ WGK +G+D Y P + L +
Sbjct: 3114 RDV----CRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRI 3169
Query: 334 RCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDI----LEGMHVIS 388
+ G +H D+ SWG +G+ G G ++ + K+ I L+G+ +
Sbjct: 3170 TEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG-----NTTVNKRPQICLGELDGVKISH 3224
Query: 389 VACGYGHSL 397
+ACG HS+
Sbjct: 3225 IACGSSHSI 3233
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 30/334 (8%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ Y WG N RGQLG + P I ++ + G ++T +G A G
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLG 3830
Query: 138 KHGQLGSGSIRNEIEP---SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N + P P++ L E + G + L+S + + G + G+
Sbjct: 3831 GSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTS--NFEVFSWGDGEDGK 3888
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG KL+ E PR I AL G+ IV ++CG++H+ A+ SKG +YTWG
Sbjct: 3889 LGHGD-----------KLSSET---PRKIEALLGKQIVHISCGSSHSAAITSKGELYTWG 3934
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
G YGRLGH + D P+ ++ + V+ + +G + ++ W
Sbjct: 3935 KGRYGRLGHGDGDDCLKPKLLEALKSYKVI--DVACGSGDAQTLAITDDDCVWSWGDGDY 3992
Query: 310 GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
GKL G D P + L G + ++ G+ + + +WG Y LG+G
Sbjct: 3993 GKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGT- 4051
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
P+KV L+G +++VA G H + D
Sbjct: 4052 -NDHVRRPRKVACLQGKQIVTVAAGSLHCVACTD 4084
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 27/305 (8%)
Query: 13 ETGKEKGGELLFCGSTCWDAV---GRRKG-ALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
ET E G + + C S A+ GR A + +P L L+ + I+ +AA
Sbjct: 464 ETVAELGIKQIMCSSDNIIALTNNGRVYSLAYNARCEAPVLLDSLIDIKIKKIAANVEGE 523
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G Y+WG + G+LGHGD I+R+ P +V EL KI + G +++ VT +
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGD-IRRE-PELVKELVNKKITQIACGSTYSAAVTSN 581
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG G+ + + P+ V L S V ACG+ L+ + + +
Sbjct: 582 GELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSW 641
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTNHTVAVD 245
G YG+LG G + P+ + L + IV V CG+ +VA+
Sbjct: 642 GDGDYGKLGRG--------------GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALG 687
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G V+TWG RLGH P+ V+ +++ I+ G + Q
Sbjct: 688 KDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD----IAVGPSHCLALTDNCQ 743
Query: 306 LYMWG 310
++ WG
Sbjct: 744 IFTWG 748
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 34/309 (11%)
Query: 101 PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P I+ L KI+K +G H +V+T + ++G + G+LG G + P +
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEA 3905
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L+ ++ +CG+ + ++S + G +YG+LGHG ++
Sbjct: 3906 LLGKQIVHISCGSSHSAAITS--KGELYTWGKGRYGRLGHGDGDDC-------------- 3949
Query: 218 PRPRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+P+ + AL ++ VACG+ T+A+ V++WG G YG+LG P R+
Sbjct: 3950 LKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRI 4009
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLS 329
+ V E GS S G LY WGK L + +D + P+ + L
Sbjct: 4010 ESLIGMAVCKVE----CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQ 4065
Query: 330 GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + +G++H D+ +WG G+LG G P V +LE + +
Sbjct: 4066 GKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPE--PTLVTVLENVKLNR 4123
Query: 389 VACGYGHSL 397
V CG HS
Sbjct: 4124 VGCGSAHSF 4132
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + + P + L + I ++ACG+ ++ AV S G +YT
Sbjct: 543 GRLGHG----------------DIRREPELVKELVNKKITQIACGSTYSAAVTSNGELYT 586
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
WG G YGRLGH +D +P V ++V+ + +G ++ G ++ W
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVV--DVACGSGDAHTLAIDKDGIVWSWGDG 644
Query: 310 --GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHAQYGELG 363
GKL G D PK + L N ++ F +G D + +WG + LG
Sbjct: 645 DYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLG 704
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G PK V+ L H++ +A G H L + D +
Sbjct: 705 HGTLDH--VRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQI 744
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 33/333 (9%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG G+LG G ++ Q P + +++A G SHT+++T+DG G N
Sbjct: 4 YCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNN 63
Query: 138 KHGQLG--SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
HGQLG + ++ N+ P + L + VT +CG ++ L++ + + G GQ
Sbjct: 64 DHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTN--WGQLFSWGSNATGQ 120
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGH D ++Y P PR I ++A +T+V+++CG +H +A+ + G ++ WG
Sbjct: 121 LGHDLD----------MVSY---PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
YG+LG + VP V + P A I+ G +S + G ++ WGK
Sbjct: 168 ANEYGQLGLGTTGKK-VPTATLVKSLAGI--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
N+ D YP L L +R + G + F+ + + G +G+LG+G +
Sbjct: 225 GQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G + +P+ V L G + +ACG H+L V
Sbjct: 285 GNE--ILPRMVFELMGSKITQIACGRKHTLAFV 315
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
V C HC+A+ G + WG NE GQLG G ++ T+V L+ I G
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H+ V++ G +G N GQLG + + P+ ++ L S V +CG DF+V+L+
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G + GL +GQLGHGT + PR + L G I ++ACG
Sbjct: 265 EGG--VFTCGLGTFGQLGHGTHGN--------------EILPRMVFELMGSKITQIACGR 308
Query: 239 NHTVA-VDSKGYVY 251
HT+A V S+G VY
Sbjct: 309 KHTLAFVPSRGKVY 322
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+ T ++ L G+ I F+A G H AV G + WG+N GQLG D R PT +
Sbjct: 185 TATLVKSLAGIPIAFIACG--GNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLK 242
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ G +V +T++G G GQLG G+ NEI P V L+ S++T
Sbjct: 243 TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKIT 302
Query: 165 ATACGADFTV 174
ACG T+
Sbjct: 303 QIACGRKHTL 312
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G IR ++ G H V +G Y WG N QLG+G Q P +
Sbjct: 62 IVPKKLESLSGKRIRSLSYGS-GPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQV 120
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 121 CTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTK 180
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V + ACG +V + V+ + G GQLG G + Q P
Sbjct: 181 IVVSIACGQTSSV--AIVDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPC 224
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G I+++ACG HT+A+ +G +Y+WG YG+LG + ++ P ++ + ++
Sbjct: 225 RVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQLSPGQI-LMEKE 283
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ G +YMWG+ +
Sbjct: 284 RVVEIAACHSAHT--SAAKTQSGLVYMWGQCR 313
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + +T + FG N LG+G ++ I P +
Sbjct: 10 TLLSPQEIATIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLES 69
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ T
Sbjct: 70 LSGKRIRSLSYGSGPHVVLSTEDG-EVYAWGHNGYSQLGNGTTNQGVTP----------- 117
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ S G VY WG+ G++G ++ PR+V
Sbjct: 118 --IQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKV-- 173
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+N L + V+S G +S G++Y WG L NNG+ + P + L
Sbjct: 174 ---SNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 229
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + SWG YG+LG G KS+ + ++E V+
Sbjct: 230 QGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG---TGNKSNQLSPGQILMEKERVV 286
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 287 EIAACHSAHT 296
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 54/189 (28%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + +L+G+ I ++ G+ H V G VY WG GY +LG+ P +V
Sbjct: 64 PKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQV--- 120
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N+L + + ++ GS +S + G +Y
Sbjct: 121 -CTNLLIKKVIEVACGSHHSLALSSDGDVY------------------------------ 149
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + + P+KV + L+ V+S+ACG S
Sbjct: 150 ---------------AWGYNNCGQVGSGSTANQPT--PRKVSNCLQTKIVVSIACGQTSS 192
Query: 397 LVIVDRTNV 405
+ IVD V
Sbjct: 193 VAIVDNGEV 201
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 181/365 (49%), Gaps = 48/365 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N ++P ++ L DI+ +AAG + H +A+ G Y++G G+LGHG+ + P
Sbjct: 67 NQLAPKKIEGLS--DIQAIAAG--TNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPK 122
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ LS I+ AG H++ +T+ G+ +FG G LG G+ ++ P + L S+
Sbjct: 123 KIEGLS--DIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPKKIESL-SD 178
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A A G + ++ L+ + + + G +G+LGHG ++Q P+
Sbjct: 179 VQAIAAGGNHSLALT--KSGDVYSFGFGLFGRLGHGDT--------------DSQLEPKK 222
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I L+ I +A G NH++A+ G VY++G+G +G+LGH + +++ P++++
Sbjct: 223 IEDLSD--IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQ 280
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRC 335
++AG+ +S G++Y +G+ N G DD + PK + L +++
Sbjct: 281 ------AVAAGANHSLALTKSGEVYSFGR-GNTGQLGHGDTDDQLTPKKIEGLK--DIQA 331
Query: 336 MDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ +G+ H S + S+G+ G LG+G + PKK++ L + I A G
Sbjct: 332 IAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLE--PKKIEGLTDIQAI--AAGAN 386
Query: 395 HSLVI 399
HSL +
Sbjct: 387 HSLAL 391
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 167/334 (50%), Gaps = 41/334 (12%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+++G G+LGHGD + P + LS I+ AG +H++ +T+ G+ +FG+
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGL 106
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G+ +++EP + L S++ A A G DF L+ + + + G G LGHG
Sbjct: 107 FGRLGHGNTDSQLEPKKIEGL-SDIQAIAAG-DFHS-LALTKSGDVYSFGNGTSG-LGHG 162
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
NT+D Q P+ I +L+ + +A G NH++A+ G VY++GFG +
Sbjct: 163 -----NTED---------QSTPKKIESLSD--VQAIAAGGNHSLALTKSGDVYSFGFGLF 206
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLK 313
GRLGH + + P++++ I+AG +S G +Y + G+L
Sbjct: 207 GRLGHGDTDSQLEPKKIEDLSDIQ------AIAAGGNHSLALTKSGDVYSFGWGLHGQLG 260
Query: 314 N-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKS 371
+ + ++ + PK + DLS +++ + +G H S S+G G+LG+G +
Sbjct: 261 HGDTENQLTPKKIEDLS--DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQL 318
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ PKK++ L+ + I A G HSL + +V
Sbjct: 319 T--PKKIEGLKDIQAI--AAGDFHSLALTKSGDV 348
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
S+ + G+ YG+LGHG D++ +LA P+ I L+ I +A GTNH++
Sbjct: 48 SVFSFGMGMYGKLGHG--------DTANQLA------PKKIEGLSD--IQAIAAGTNHSL 91
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
A+ G VY++GFG +GRLGH + P++++ I+AG +S
Sbjct: 92 ALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQ------AIAAGDFHSLALTK 145
Query: 303 GGQLYMWGKLKN-----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G +Y +G + N +D PK + LS +++ + +G H S + S+G
Sbjct: 146 SGDVYSFGNGTSGLGHGNTEDQSTPKKIESLS--DVQAIAAGGNHSLALTKSGDVYSFGF 203
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G LG+G S PKK++ L + I A G HSL + +V
Sbjct: 204 GLFGRLGHG--DTDSQLEPKKIEDLSDIQAI--AAGGNHSLALTKSGDV 248
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G + WG N RGQLG + + P L+ K + G VT +G A G+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1466
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG GS + P+ + + +++V+ A G L+ + + G
Sbjct: 1467 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHI---LALSNEGEVYSWGEGVD 1523
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + + PR I +L G+ IVKVA G +H+ A+++ G +YT
Sbjct: 1524 GKLGHGNRSSLD--------------HPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1569
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC----TAGGGQLYM 308
WG G YGRLGH + +D+ P+ V+ + N V+ + G + C T G ++
Sbjct: 1570 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVV--DVACGNGDAQTLCITEGTGGSSVVWS 1627
Query: 309 W-----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G D ++D L G ++ + G+ + + + +WG Y
Sbjct: 1628 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1687
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G + PK ++ L GM V+ V+ G H + VD +V
Sbjct: 1688 LGHG--SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1729
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 186/444 (41%), Gaps = 86/444 (19%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GG++ CG + +G G + G++ T++ L I+ +A H +A+ +G
Sbjct: 481 GGKVYACGESTSGRLGL--GPVTGSVSRLTQV--LFPQPIKKLAVHSGGRHAMALTYDGH 536
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y+WG E G+LGHG + P + + I+ G SH+ + G +G
Sbjct: 537 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
+G+LG G+ ++P PV+ L +V ACG+ L + + + G +G+LG
Sbjct: 597 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 656
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + P+ + L+G+ +VK+ CG ++A+ G V+TWG G
Sbjct: 657 GGSDGCCV--------------PKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD 702
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
Y RLGH + P+ V+ + + V+ ++ G+++ GGQ++
Sbjct: 703 YFRLGHGSDQHVRRPQVVEGLREHKVVD----VAVGALHCLAVTEGGQVF---------- 748
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+WG +G+ G G G + P K
Sbjct: 749 -----------------------------------AWGDNDHGQQGNG--GTTVNRKPMK 771
Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKK 437
V LEG+ + +ACG HS+ D ++ + + + Q +E ID K
Sbjct: 772 VQGLEGVKITKLACGSSHSIAFADTSHEAQTFEAI---------QFHENID-------KL 815
Query: 438 GAAKVSNNSKKRKKSKDSSEEEEE 461
G++ + + K++K + ++ +++
Sbjct: 816 GSSYIKKSMKQKKHHQHTTSYDDK 839
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 145/356 (40%), Gaps = 70/356 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + + V I V+ H +A+ EG Y+WG G+LGHG++ D P I+
Sbjct: 1483 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIES 1542
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I K G SH+ + G +G ++G+LG ++++P V L V
Sbjct: 1543 LRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVD 1602
Query: 166 TACGADFTVWLSSVEG----ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
ACG L EG + + + G YG+LG G + P
Sbjct: 1603 VACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKV--------------PA 1648
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I L G+ I VACG+ ++A+ G VYTWG G Y RLGH + P+ ++ +
Sbjct: 1649 IIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM 1708
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
V+ +S GS++ G +Y WG + D+
Sbjct: 1709 KVVE----VSVGSLHCIAAVDNGDVYTWG----DNDE----------------------- 1737
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G++G G +++ +P+ V L+G H+ V+CG H++
Sbjct: 1738 ------------------GQIGDG--TTQATQIPRLVAALQGHHISHVSCGSAHTV 1773
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 43/344 (12%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D + + WG N++ QLG + P +L + K+ + G VT G A
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 486
Query: 134 FGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G + G+LG G + + P P++ L A G + L+ + +
Sbjct: 487 CGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTY--DGHVYS 539
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + G+LGHG+ + T PR I + I ++CG++H+ A+ S
Sbjct: 540 WGDGEEGKLGHGSRADALT--------------PRKIETFPEKCIRDISCGSSHSAAIGS 585
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G +YTWG G YGRLGH P+ V V+ + + + C G +
Sbjct: 586 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVV--QVACGSRDAQTLCLTQDGLV 643
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHA 357
Y W GKL G D PKP+ LSG ++ ++ G F A S C +WG
Sbjct: 644 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGA--QFSLALSRCGLVWTWGKG 701
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Y LG+G + P+ V+ L V+ VA G H L + +
Sbjct: 702 DYFRLGHG--SDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 743
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L P + L G I VA G H A++ G YTWG+ G+LGH D + +P
Sbjct: 1533 SLDHPRIIESLRGDLIVKVATG--GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPK 1590
Query: 103 IVSELSKYKIKKA--GAGRSHTVVVTED--GNSLAFGWNK--HGQLGSGSIRNEIEPSPV 156
+V+ L + G G + T+ +TE G+S+ + W +G+LG G P+ +
Sbjct: 1591 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1650
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L+ +T ACG+ F++ LS G G Y +LGHG+D E
Sbjct: 1651 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKG--DYYRLGHGSD--------------E 1694
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP+ I +L G +V+V+ G+ H +A G VYTWG G++G + +PR V
Sbjct: 1695 HVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1754
Query: 276 DVFQRNNV 283
Q +++
Sbjct: 1755 AALQGHHI 1762
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P + L+G I VA G S +A+ G YTWG+ + +LGHG
Sbjct: 1638 RGGSDGCKV-PAIIDTLMGKHITHVACG--SQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1694
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP ++ L K+ + G H + ++G+ +G N GQ+G G+ + P V
Sbjct: 1695 HVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1754
Query: 157 RCLV-SEVTATACGADFTV 174
L ++ +CG+ TV
Sbjct: 1755 AALQGHHISHVSCGSAHTV 1773
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G + WG N RGQLG + + P L+ K + G VT +G A G+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1465
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG GS + P+ + + +++V+ A G L+ + + G
Sbjct: 1466 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHI---LALSNEGEVYSWGEGVD 1522
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHG + + PR I +L G+ IVKVA G +H+ A+++ G +YT
Sbjct: 1523 GKLGHGNRSSLD--------------HPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1568
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC----TAGGGQLYM 308
WG G YGRLGH + +D+ P+ V+ + N V+ + G + C T G ++
Sbjct: 1569 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVV--DVACGNGDAQTLCITEGTGGSSVVWS 1626
Query: 309 W-----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
W GKL G D ++D L G ++ + G+ + + + +WG Y
Sbjct: 1627 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1686
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G + PK ++ L GM V+ V+ G H + VD +V
Sbjct: 1687 LGHG--SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1728
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 186/444 (41%), Gaps = 86/444 (19%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GG++ CG + +G G + G++ T++ L I+ +A H +A+ +G
Sbjct: 480 GGKVYACGESTSGRLGL--GPVTGSVSRLTQV--LFPQPIKKLAVHSGGRHAMALTYDGH 535
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y+WG E G+LGHG + P + + I+ G SH+ + G +G
Sbjct: 536 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
+G+LG G+ ++P PV+ L +V ACG+ L + + + G +G+LG
Sbjct: 596 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 655
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + P+ + L+G+ +VK+ CG ++A+ G V+TWG G
Sbjct: 656 GGSDGCCV--------------PKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD 701
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
Y RLGH + P+ V+ + + V+ ++ G+++ GGQ++
Sbjct: 702 YFRLGHGSDQHVRRPQVVEGLREHKVVD----VAVGALHCLAVTEGGQVF---------- 747
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+WG +G+ G G G + P K
Sbjct: 748 -----------------------------------AWGDNDHGQQGNG--GTTVNRKPMK 770
Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKK 437
V LEG+ + +ACG HS+ D ++ + + + Q +E ID K
Sbjct: 771 VQGLEGVKITKLACGSSHSIAFADTSHEAQTFEAI---------QFHENID-------KL 814
Query: 438 GAAKVSNNSKKRKKSKDSSEEEEE 461
G++ + + K++K + ++ +++
Sbjct: 815 GSSYIKKSMKQKKHHQHTTSYDDK 838
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 145/356 (40%), Gaps = 70/356 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT + + V I V+ H +A+ EG Y+WG G+LGHG++ D P I+
Sbjct: 1482 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIES 1541
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I K G SH+ + G +G ++G+LG ++++P V L V
Sbjct: 1542 LRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVD 1601
Query: 166 TACGADFTVWLSSVEG----ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
ACG L EG + + + G YG+LG G + P
Sbjct: 1602 VACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKV--------------PA 1647
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I L G+ I VACG+ ++A+ G VYTWG G Y RLGH + P+ ++ +
Sbjct: 1648 IIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM 1707
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
V+ +S GS++ G +Y WG + D+
Sbjct: 1708 KVVE----VSVGSLHCIAAVDNGDVYTWG----DNDE----------------------- 1736
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G++G G +++ +P+ V L+G H+ V+CG H++
Sbjct: 1737 ------------------GQIGDG--TTQATQIPRLVAALQGHHISHVSCGSAHTV 1772
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 43/344 (12%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D + + WG N++ QLG + P +L + K+ + G VT G A
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 485
Query: 134 FGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G + G+LG G + + P P++ L A G + L+ + +
Sbjct: 486 CGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTY--DGHVYS 538
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + G+LGHG+ + T PR I + I ++CG++H+ A+ S
Sbjct: 539 WGDGEEGKLGHGSRADALT--------------PRKIETFPEKCIRDISCGSSHSAAIGS 584
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G +YTWG G YGRLGH P+ V V+ + + + C G +
Sbjct: 585 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVV--QVACGSRDAQTLCLTQDGLV 642
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHA 357
Y W GKL G D PKP+ LSG ++ ++ G F A S C +WG
Sbjct: 643 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGA--QFSLALSRCGLVWTWGKG 700
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Y LG+G + P+ V+ L V+ VA G H L + +
Sbjct: 701 DYFRLGHG--SDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 742
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+L P + L G I VA G H A++ G YTWG+ G+LGH D + +P
Sbjct: 1532 SLDHPRIIESLRGDLIVKVATG--GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPK 1589
Query: 103 IVSELSKYKIKKA--GAGRSHTVVVTED--GNSLAFGWNK--HGQLGSGSIRNEIEPSPV 156
+V+ L + G G + T+ +TE G+S+ + W +G+LG G P+ +
Sbjct: 1590 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1649
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L+ +T ACG+ F++ LS G G Y +LGHG+D E
Sbjct: 1650 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKG--DYYRLGHGSD--------------E 1693
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP+ I +L G +V+V+ G+ H +A G VYTWG G++G + +PR V
Sbjct: 1694 HVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1753
Query: 276 DVFQRNNV 283
Q +++
Sbjct: 1754 AALQGHHI 1761
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P + L+G I VA G S +A+ G YTWG+ + +LGHG
Sbjct: 1637 RGGSDGCKV-PAIIDTLMGKHITHVACG--SQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1693
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP ++ L K+ + G H + ++G+ +G N GQ+G G+ + P V
Sbjct: 1694 HVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1753
Query: 157 RCLV-SEVTATACGADFTV 174
L ++ +CG+ TV
Sbjct: 1754 AALQGHHISHVSCGSAHTV 1772
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N P + L G +I V+ G H A+D +G Y WGR G + + R
Sbjct: 128 DSNENLPRLVEALKGKNIVKVSIG--GNHMAAIDKDGHLYCWGRAASAGSGGTEHVFIPR 185
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
I +L K K+ GRSHT VTE G +G G+LG G ++ +P V+ L
Sbjct: 186 -LIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLT 244
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+V ACG DFT+++ + + + G YGQLG G + + P
Sbjct: 245 EKVVDVACGRDFTIFVCE---SGLYSCGADDYGQLGLGRSHGERFVQT-----------P 290
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R+++ +V ++ G H A+ G VYTWG G G+LGH E+ D + + VD +
Sbjct: 291 RSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRN 350
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++ ++ G +++ G LY WG+
Sbjct: 351 FEIVQ----VACGGGHTAAVTKDGVLYTWGR 377
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 146/328 (44%), Gaps = 32/328 (9%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
T+G N GQLG G + DRP V LS +I AG S T ++ DG+ +G ++G
Sbjct: 62 TFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYG 121
Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG NE P V L + + + G + A + + G L
Sbjct: 122 KLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHM-------------AAIDKDGHL---- 164
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ S+ E PR I L E ++ V+CG +HT AV KG V+TWG G
Sbjct: 165 -YCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTAGG-GQLYMWGKLK 313
G LGH E+ ++ P++V V + S SC A GQL G +
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEKVVDVACGRDFTIFVCESGLYSCGADDYGQL---GLGR 280
Query: 314 NNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
++G+ ++ P+ L ++ + +G+ H +G D +WG + G+LG+G S
Sbjct: 281 SHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCS 340
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
A P VD L ++ VACG GH+ +
Sbjct: 341 LAKP--VDNLRNFEIVQVACGGGHTAAV 366
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 28/232 (12%)
Query: 177 SSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+++E ++L GL GQLG G + + RP + AL+G+ IV VA
Sbjct: 52 AALENGTLLTTFGLNLIGQLGQGHERPAD--------------RPFPVEALSGKRIVYVA 97
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G + T A+ G VYTWG G YG+LGH + +E +PR V+ + N++ +S G
Sbjct: 98 AGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVK----VSIGGN 153
Query: 296 NSSCTAGGGQLYMWGKLKNNG----DDWMYPKPLM-DLSGWNLRCMDSGNMHH-FVGADS 349
+ + G LY WG+ + G + P+ + DL + + G H V
Sbjct: 154 HMAAIDKDGHLYCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG+ GELG+G + S PKKV L V+ VACG ++ + +
Sbjct: 214 EVWTWGNGYEGELGHGE--KNSQYQPKKVQSLT-EKVVDVACGRDFTIFVCE 262
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L CG+ + +G + + + +P L D+ ++AG H A+ +G YT
Sbjct: 265 LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAG--DYHVCALGRDGLVYT 322
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG GQLGHG+K V L ++I + G HT VT+DG +G + GQ
Sbjct: 323 WGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQ 382
Query: 142 LGSGSIRNEI---EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
LG G I SPV +VT+ GA V L S A +
Sbjct: 383 LGRGGELESIASYRTSPV-----QVTSLPAGAVLYVTLGSDHSAVL 423
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
A+++ + T+G G+LG ++ P V+ ++ ++AG ++ +
Sbjct: 53 ALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIV----YVAAGDSCTAAISL 108
Query: 303 GGQLYMWG-----KLKNNGD-DWMYPKPLMDLSGWNL-RCMDSGNMHHFVGADSSCISWG 355
G +Y WG KL +N D + P+ + L G N+ + GN + D WG
Sbjct: 109 DGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWG 168
Query: 356 HAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDV 414
A G G + +P+ + LE VISV+CG H+ + ++ GE +
Sbjct: 169 RAASA----GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEK---GEVWTWGNG 221
Query: 415 YDGKASSQDNEEIDRNSTVPPKK 437
Y+G+ ++NS PKK
Sbjct: 222 YEGELGHG-----EKNSQYQPKK 239
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 149/353 (42%), Gaps = 73/353 (20%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKY 110
PL ++R + AG H + +G YTWGR GQLGH + + P IV ++
Sbjct: 32 PLNRKNVRSIGAG--KSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENR 89
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATAC 168
GR+HTVVVT++G +G NK GQLG+G +++ P + ++ V + AC
Sbjct: 90 GSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIAC 149
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G TV + +EG +I + G Q GQLGHG NTK P + +A
Sbjct: 150 GEFHTVAI-CIEG-TIWSWGRNQCGQLGHG-----NTKTCYF---------PTQVVGMAK 193
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPE 287
+ ++ ACG HT+ + +Y WG YG+LG +R K P VD +R+
Sbjct: 194 KICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACH-- 251
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+ G +S Q+Y WG+
Sbjct: 252 --VLCGYSHSMALMKNEQIYTWGR------------------------------------ 273
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ C G+LG G Y S +P+ V L + V +ACGY H + V
Sbjct: 274 -NDC--------GQLGLGHY--THSPVPELVTALRSVRVQQIACGYDHCVAFV 315
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
++ C H VA+ +EG ++WGRN+ GQLGHG+ PT V ++K +A G
Sbjct: 144 VLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGG 203
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL-VSEVTATACGADFTVWLS 177
HT+V+T+ A+G N +GQLG S + ++P V L S CG ++ L
Sbjct: 204 QHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM 263
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
E I G GQLG G Y P P + AL + ++ACG
Sbjct: 264 KNE--QIYTWGRNDCGQLGLG--------------HYTHSPVPELVTALRSVRVQQIACG 307
Query: 238 TNHTVA---------VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
+H VA + +VY+WG G G+LGH E PR V+
Sbjct: 308 YDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 112/283 (39%), Gaps = 27/283 (9%)
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGL 189
++G NK+GQLG G N P+ + L ++ + GA + E + G
Sbjct: 3 SWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGR 62
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
GQLGH + E + P + + VACG NHTV V G
Sbjct: 63 GWEGQLGH-------------DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGL 109
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YTWG G+LG + K P +D LP I+ G ++ G ++ W
Sbjct: 110 IYTWGENKAGQLGTGDLKSSNSPVLIDSALN---LPSVLSIACGEFHTVAICIEGTIWSW 166
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G+ + N +P ++ ++ G H V D++ I +WG YG+L
Sbjct: 167 GRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQL 226
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G K+ P VD L V CGY HS+ ++ +
Sbjct: 227 GLN-RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQI 268
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
VY+WG YG+LG + +P + D R NV I AG +S+ A G
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRS----IGAGKSHSAVIAEDGD 56
Query: 306 LYMWGK--LKNNGDDW-----MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
+Y WG+ G D + P + + + G H V D+ I +WG
Sbjct: 57 VYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGEN 116
Query: 358 QYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVI 399
+ G+LG G KSS P +D L V+S+ACG H++ I
Sbjct: 117 KAGQLGTGDL--KSSNSPVLIDSALNLPSVLSIACGEFHTVAI 157
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
AV GR YTWG NE+GQLG G++ P +V L I GR H +T+ G
Sbjct: 226 AVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEV 285
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAG 188
++G GQLG G++++ + P ++ V + ACG++FT+ + SV+G + G
Sbjct: 286 YSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTM-VRSVQGL-LYAFG 343
Query: 189 LPQYGQLGHGTDNE---YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+YGQLG + + + +D+ K + P + +L + I VACG HT+ V
Sbjct: 344 HGEYGQLGSTEETQHLDFGGRDNHFKYSI-----PIVVKSLETKKIKNVACGHLHTIVVT 398
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ VY WG+G G LG ++ + VP+ +
Sbjct: 399 DENEVYQWGWGSSGALGLGNKRFQLVPQLI 428
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 38/390 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG------DKIQR 98
+ PT + L+G I +G H +AV G Y+WGR++ GQLG G DK+
Sbjct: 23 LEPTVIEGLLGKRIIQTVSG--EAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMF 80
Query: 99 -DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
+PT++ L +I K G H++ +T+ G + W + +L +I+ +
Sbjct: 81 VAKPTLIKSLQHERIIKVACGNFHSLALTDMGK--VYEWGQLHRLDESQSSLDIQSTNGL 138
Query: 158 CLVSEVTAT-ACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNTKDSSV-KLAY 214
+ +++ A + +LS + A N G P+ N +K + K+
Sbjct: 139 IEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIID 198
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
Q P I + E +V V+ G + AV G +YTWGF G+LG + P+
Sbjct: 199 LNQTIPMQIQDIP-EEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQL 257
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDL 328
V N++ + G + G++Y W G+L + N +++PK +
Sbjct: 258 VKTLIDVNIVS----VVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQF 313
Query: 329 SGWNLRCMDSGNMHHFVGADSS---CISWGHAQYGELG------YGPYGQKSS----AMP 375
N R +F S ++GH +YG+LG + +G + + ++P
Sbjct: 314 VELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIP 373
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
V LE + +VACG+ H++V+ D V
Sbjct: 374 IVVKSLETKKIKNVACGHLHTIVVTDENEV 403
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 55/376 (14%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTI-VSELSKYKIKKAG 116
R + C + H +A+ G+ Y WG+ R IQ I + LS +I +A
Sbjct: 94 RIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEAS 153
Query: 117 A--------------GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
G + ED + +K LG N+ P ++ + E
Sbjct: 154 VSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEE 213
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V + G F+ ++ + + G + GQLG G ++T P+
Sbjct: 214 VVDVSGGWAFSAAVT--KSGRLYTWGFNEKGQLGLGNRWFHST--------------PQL 257
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L IV V CG H A+ +G VY+WG G +G+LGH K P+++ F N
Sbjct: 258 VKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELN 317
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-------------KNNGDDWMYPKP 324
A ++ GS + + G LY +G+L ++N + P
Sbjct: 318 --ERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIV 375
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L ++ + G++H V D + + WG G LG G ++ +P+ + L G
Sbjct: 376 VKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLG--NKRFQLVPQLITSLSG 433
Query: 384 MHVISVACGYGHSLVI 399
+ S+ G H++V+
Sbjct: 434 EEIASITAGEKHTIVV 449
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
L+ G +K+GQLG SI+ +EP+ + L+ + T G ++ +S + + G
Sbjct: 4 LSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRF--GDVYSWGRS 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ GQLG G Y D + +A +P I +L E I+KVACG H++A+ G V
Sbjct: 62 KEGQLGIGQG--YGGSDKVMFVA-----KPTLIKSLQHERIIKVACGNFHSLALTDMGKV 114
Query: 251 YTWG 254
Y WG
Sbjct: 115 YEWG 118
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
S+L+ G + GQLGH S+K E P I L G+ I++ G H++
Sbjct: 2 SVLSVGQSKNGQLGH----------DSIKECLE----PTVIEGLLGKRIIQTVSGEAHSL 47
Query: 243 AVDSKGYVYTWGFGGYGRLGHRE-----QKDEWV--PRRVDVFQRNNVLPPEAVISAGSV 295
AV G VY+WG G+LG + K +V P + Q ++ ++ G+
Sbjct: 48 AVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIK----VACGNF 103
Query: 296 NSSCTAGGGQLYMWGKL 312
+S G++Y WG+L
Sbjct: 104 HSLALTDMGKVYEWGQL 120
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 156/356 (43%), Gaps = 33/356 (9%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G I V AG H +A+ G WGRN GQLG+GD R P V + I
Sbjct: 88 GTTITAVTAG--GLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITA 145
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
AG H++ +T G LA+G N HGQLG+G N P V L + VT TA A
Sbjct: 146 IAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVS-LPAGVTITAVAAGAFH 204
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-- 232
L+ ++L G GQLG+GT +T P + AG TI
Sbjct: 205 SLAVTSTGAVLAWGDNSNGQLGNGTTTGSST--------------PVDVDLPAGTTITAV 250
Query: 233 -KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H++A+ S G WG G+LG+ + + P VD+ + ++
Sbjct: 251 AAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTI----TAVA 306
Query: 292 AGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDL-SGWNLRCMDSG-NMHHF 344
AG ++S G + WG+ + NG P+ +DL +G + + +G +
Sbjct: 307 AGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLA 366
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + ++WG G+LG G +S+ P VD+ G+ + +VA G HS+ +V
Sbjct: 367 LTTAGAVVAWGRNVSGQLGNGDTINRST--PVDVDLPAGVTITAVAAGGQHSMALV 420
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 27/328 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N GQLG+G P V + I AG H++ +T G LA+G N
Sbjct: 59 FAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFS 118
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG+G N P V + +TA A GA ++ L+S ++L G +GQLG+G
Sbjct: 119 GQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTS--AGTVLAWGENLHGQLGNG 176
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+T P ++ AG TI VA G H++AV S G V WG
Sbjct: 177 GTTNMST--------------PVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSN 222
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN---- 314
G+LG+ P VD+ + A ++ + + + T+ G L WG +
Sbjct: 223 GQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALA-WGNNADGQLG 281
Query: 315 NGDDWMYPKPL-MDL-SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
NGD P+ +DL +G + + +G +H + A + ++WG G+LG G
Sbjct: 282 NGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGT--TTG 339
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
S+ P VD+ G + ++A G+ L +
Sbjct: 340 SSTPVDVDLPTGATINAIAAGFDFGLAL 367
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 159/356 (44%), Gaps = 47/356 (13%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S + A+ G WG GQLG G+ P + LS + + HT
Sbjct: 49 CGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVIQVACSDRHTAA 106
Query: 125 VTEDGNSLAFGWNKHGQLGSG----SIRNEI--EPSPVRCLVSE-VTATACGADFTVWLS 177
+ +G +G +K+G+LG G SI N + +P V+ L E V +CG+ T L+
Sbjct: 107 ILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLT 166
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ A L GL G+LGHG + T P+ I +LAG I +++CG
Sbjct: 167 DDKKA--LTWGLGLQGRLGHGDTQDIFT--------------PKLIESLAGLPIKEISCG 210
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAG 293
+HT + G +Y +G G +G+LG D +PR ++ P E + +S G
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-------PLEDIQITKVSLG 263
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
S +S+ G++Y WG+ D++ PK L +L + + GN H
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVAL 323
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+D I +WG + +G+G G + MP K IL+ +++ V C HS+ + D
Sbjct: 324 SDVGDIYTWGMTK--NIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSD 376
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 50 LRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD---RPT 102
L P V + ++ + C H A+ G YTWG ++ G+LGHG I + +P
Sbjct: 83 LVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPM 142
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
V L K+ + G HT +T+D +L +G G+LG G ++ P + L
Sbjct: 143 KVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL 202
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ +CG T L + G +G+LG G+ T D + PR
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGG--AFGKLGFGS-----TDDVLI---------PR 246
Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR---EQKDEWVPRRVDV 277
+ L I KV+ G+ H+ AV G VYTWG G GRLGH + D P+R+
Sbjct: 247 LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSN 304
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
++ ++ IS G+ +S + G +Y WG KN G
Sbjct: 305 LEKAFIVD----ISCGNSHSVALSDVGDIYTWGMTKNIG 339
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G+ + ++ N+VS P +++ L G + V+ G C+ D + TWG +G+LGH
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD--KKALTWGLGLQGRLGH 184
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
GD P ++ L+ IK+ G HT ++ G FG G+LG GS + +
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLI 244
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP----QYGQLGH---GTDNEYNT 205
P + + ++ T V L S A++ G Q G+LGH G ++++ +
Sbjct: 245 PRLLEGPLEDIQITK------VSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLS 298
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P+ ++ L IV ++CG +H+VA+ G +YTWG +GH
Sbjct: 299 --------------PKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHGI 342
Query: 266 Q-KDEWVPRRVDVFQRNNVL 284
Q +P + + Q N++
Sbjct: 343 QGIHPNMPSKHPILQNKNIV 362
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
G +YGQ HG+ E E P P + L +I KV+CG+N++ A+ +
Sbjct: 14 GSTEYGQ--HGSKGE------------EVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G + WG+GG G+LG +D VP RV++ +N + ++ +++ G+L
Sbjct: 60 SGDLILWGYGGCGQLGFGNLEDCLVP-RVNLSLKNVI-----QVACSDRHTAAILSNGEL 113
Query: 307 YMWGKLKN------------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCIS 353
Y WG KN + + P + L G + + G+ H + D ++
Sbjct: 114 YTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALT 173
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
WG G LG+G + PK ++ L G+ + ++CG H+ +++
Sbjct: 174 WGLGLQGRLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 150/358 (41%), Gaps = 39/358 (10%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
+G + VAAG H +A+ G WG N GQLG G I R P VS +
Sbjct: 86 LGTTVTAVAAG--RFHSLALTSAGTVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVT 143
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
AG H++ +T G LA+G N GQLG GS P L S VT TA A +
Sbjct: 144 AVAAGGVHSMALTSVGTVLAWGGNGVGQLGDGSTTRRTTPVE-AILPSGVTVTAVAAAES 202
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ + L GL GQLG G+ +T P ++A G +
Sbjct: 203 HSLAVTSAGAALAWGLNGTGQLGDGSTINRST--------------PVSVALPLGTEVTA 248
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+A G H++AV S G WG+ G G+LG + P V + V AV+ AG
Sbjct: 249 IAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPLGAEV---TAVV-AG 304
Query: 294 SVNSSCTAGGGQLYMWG----------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++S+ G WG N+ + P +G L + S + H
Sbjct: 305 RLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLP----TGTTLAAIASRDSDH 360
Query: 344 FVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ D + ++WG +G+LG G S+ +P V + G+ +++ A G H+L +
Sbjct: 361 TIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVP--VALPTGITLLTTAAGSDHTLAL 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 41 DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
DG L+ +P + G + VAAG V H +A+ G WG N GQLG G +
Sbjct: 122 DGTLIDRSAPVEVSLPPGTTVTAVAAGGV--HSMALTSVGTVLAWGGNGVGQLGDGSTTR 179
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P S + A SH++ VT G +LA+G N GQLG GS N P V
Sbjct: 180 RTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINRSTPVSVA 239
Query: 158 C-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +EVTA A G ++ ++SV A L G GQLG GT +T
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAA--LAWGYNGTGQLGDGTTINRST----------- 286
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
P ++A G + V G H+ A+ + G WG
Sbjct: 287 ---PVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWG 321
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 117/274 (42%), Gaps = 32/274 (11%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G N +GQLG+GS P V L + VTA A G ++ L+S ++L G
Sbjct: 58 LAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTS--AGTVLAWGTN 115
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG GT D S + P G T+ VA G H++A+ S G V
Sbjct: 116 HFGQLGDGT-----LIDRSAPVEVSLPP---------GTTVTAVAAGGVHSMALTSVGTV 161
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
WG G G+LG P + V AV +A S + + T+ G L WG
Sbjct: 162 LAWGGNGVGQLGDGSTTRRTTPVEAILPSGVTV---TAVAAAESHSLAVTSAGAALA-WG 217
Query: 311 KLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
L G + P + G + + +G +H V + + ++WG+ G+L
Sbjct: 218 -LNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQL 276
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G G +S+ P V + G V +V G HS
Sbjct: 277 GDGTTINRST--PVSVALPLGAEVTAVVAGRLHS 308
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + +G ++ +AAG H +AV G WG N GQLG G I R P V+
Sbjct: 234 TPVSVALPLGTEVTAIAAG--RLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVA 291
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
++ AGR H+ +T G +LA+G N GQLG+G N E V A
Sbjct: 292 LPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLPTGTTLA 351
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
D ++ + L G +GQLG GT +T P +A
Sbjct: 352 AIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPST--------------PVPVAL 397
Query: 226 LAGETIVKVACGTNHTVAVDSK 247
G T++ A G++HT+A+ ++
Sbjct: 398 PTGITLLTTAAGSDHTLALPAQ 419
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 189/433 (43%), Gaps = 52/433 (12%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S + A+ G WG GQLG G+ P + LS + + HT
Sbjct: 49 CGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVVQVACSDRHTAA 106
Query: 125 VTEDGNSLAFGWNKHGQLGSG----SIRNEI--EPSPVRCLVSE-VTATACGADFTVWLS 177
+ +G +G +K+G+LG G SI N + +P V+ L E V +CG+ T L+
Sbjct: 107 ILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLT 166
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ A L GL G+LGHG + T P+ I +LAG I +++CG
Sbjct: 167 DDKKA--LTWGLGLQGRLGHGDTQDIFT--------------PKLIESLAGLPIKEISCG 210
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAG 293
+HT + G +Y +G G +G+LG D +PR ++ P E + +S G
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-------PLEDIQITKVSLG 263
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
S +S+ G++Y WG+ D++ PK L +L + + GN H
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVAL 323
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D I +WG + +G+G G + MP K IL+ +++ V C HS+ + D +
Sbjct: 324 SDVGDIYTWGMTK--NIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380
Query: 406 GERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENS 465
++ + + ++ ++D E + ++ K K + KD + + E
Sbjct: 381 VQK--SPETWKPQSLAEDQEPKKADQSIEEFKTGLDSLIRRKILQGIKDKLKTGGDREKI 438
Query: 466 DYESDD---SEEQ 475
+Y D+ SEEQ
Sbjct: 439 EYLMDELEKSEEQ 451
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 50 LRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD---RPT 102
L P V + ++ V C H A+ G YTWG ++ G+LGHG I + +P
Sbjct: 83 LVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPM 142
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
V L K+ + G HT +T+D +L +G G+LG G ++ P + L
Sbjct: 143 KVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL 202
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ +CG T L + G +G+LG G+ T D + PR
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGG--AFGKLGFGS-----TDDVLI---------PR 246
Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR---EQKDEWVPRRVDV 277
+ L I KV+ G+ H+ AV G VYTWG G GRLGH + D P+R+
Sbjct: 247 LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSN 304
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
++ ++ IS G+ +S + G +Y WG KN G
Sbjct: 305 LEKAFIVD----ISCGNSHSVALSDVGDIYTWGMTKNIG 339
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G+ + ++ N+VS P +++ L G + V+ G C+ D + TWG +G+LGH
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD--KKALTWGLGLQGRLGH 184
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
GD P ++ L+ IK+ G HT ++ G FG G+LG GS + +
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLI 244
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP----QYGQLGH---GTDNEYNT 205
P + + ++ T V L S A++ G Q G+LGH G ++++ +
Sbjct: 245 PRLLEGPLEDIQITK------VSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLS 298
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
P+ ++ L IV ++CG +H+VA+ G +YTWG +GH
Sbjct: 299 --------------PKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHGI 342
Query: 266 Q-KDEWVPRRVDVFQRNNVL 284
Q +P + + Q N++
Sbjct: 343 QGIHPNMPSKHPILQNKNIV 362
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
G +YGQ HG+ E E P P + L +I KV+CG+N++ A+ +
Sbjct: 14 GSSEYGQ--HGSKGE------------EVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G + WG+GG G+LG +D VP RV++ +N V ++ +++ G+L
Sbjct: 60 SGDLILWGYGGCGQLGFGNLEDCLVP-RVNLSLKNVV-----QVACSDRHTAAILSNGEL 113
Query: 307 YMWGKLKN------------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCIS 353
Y WG KN + + P + L G + + G+ H + D ++
Sbjct: 114 YTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALT 173
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
WG G LG+G + PK ++ L G+ + ++CG H+ +++
Sbjct: 174 WGLGLQGRLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
SK V WG YG+ G + ++ P VD + L + +S GS S+ G
Sbjct: 6 SKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRH---LSSISKVSCGSNYSAAITNSGD 62
Query: 306 LYMWG-----KL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L +WG +L N +D + P+ ++LS N+ + + H + ++ +WG ++
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVPR--VNLSLKNVVQVACSDRHTAAILSNGELYTWGCSK 120
Query: 359 YGELGYGPYGQKSS----AMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG+G + S + P KV LEG VI V+CG H+ + D
Sbjct: 121 NGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD 167
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 2731 GMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 2790
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 2791 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 2850
Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 2851 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV----------- 2899
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 2900 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2956
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 2957 GLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 2986
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 163/364 (44%), Gaps = 37/364 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVS 105
P+ L +++ VA G S AV VEG+ Y G G+LG G P V+
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVT 2744
Query: 106 ELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
LS Y +KK +G H +T DG ++G G+LG S N +P + L ++
Sbjct: 2745 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR 2804
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG+ + L+S + GL +YG+LGHG DN Q +P+
Sbjct: 2805 IRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT-------------TQLKPKM 2848
Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L G +++VACG+ T+A+ +G V++WG G +G+LG + VP+ ++
Sbjct: 2849 VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNG 2908
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLR 334
V I G+ S G ++ WGK +G D KP + L G +
Sbjct: 2909 QGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2964
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G +H D+ + +WG +G+ G G + P V LEG + VACG
Sbjct: 2965 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGS 3022
Query: 394 GHSL 397
HS+
Sbjct: 3023 SHSV 3026
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 31/269 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V IR VA HC+A+ EG Y+WG E G+LGHG++ DRP +V
Sbjct: 3706 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 3765
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 3766 SLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3825
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK---DSSVKLAYEAQP--- 218
ACG+ L + ++ + G YG+LG G + S+++ + P
Sbjct: 3826 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPS 3885
Query: 219 ------------------------RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
RPR + L G+ ++ +A G+ H V +G VYTWG
Sbjct: 3886 WPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWG 3945
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
G+LG PR V Q V
Sbjct: 3946 DNDEGQLGDGTTNAIQRPRLVAALQGRKV 3974
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ + + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEALQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 149/375 (39%), Gaps = 74/375 (19%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + A G + LSS EG + + G + G
Sbjct: 3691 GAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3748
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR + +L G +V +A G H+ V S G +YTW
Sbjct: 3749 KLGHGNRSPCD--------------RPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTW 3794
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--- 310
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 3795 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 3852
Query: 311 ----------------------------------------------KLKNNGDDWM-YPK 323
+L + DD + P+
Sbjct: 3853 YGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPR 3912
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ L G + + +G++H + +WG G+LG G + P+ V L+
Sbjct: 3913 QVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDG--TTNAIQRPRLVAALQ 3970
Query: 383 GMHVISVACGYGHSL 397
G V VACG H+L
Sbjct: 3971 GRKVNRVACGSAHTL 3985
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G GQ++ W GKL G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSD 644
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC + D SWG LG+G ++
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 701 PKLLEALQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR +A C S H A+ G YTWG E G+LGHGD + +P +V L +++ +
Sbjct: 2805 IRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2862
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +T++G ++G G+LG G P + L + V CGA F++
Sbjct: 2863 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSL 2922
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYN-------------------------TKDSS 209
L+ + + G Y +LGHG+D D+
Sbjct: 2923 ALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG 2980
Query: 210 VKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A+ +P + L G+ I +VACG++H+VA
Sbjct: 2981 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 111/284 (39%), Gaps = 36/284 (12%)
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD--FTVWLSSVEGASILNAGLPQYG 193
W G G IR EI P LV + T AD + L V G + LN
Sbjct: 2609 WQSSGSQGKHWIRLEIFPD---VLVHRLKMTVDPADSSYMPSLVVVSGGNSLN------- 2658
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQ--PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
L + D++V L + P L+ +V+VA G+ AV +G VY
Sbjct: 2659 NLIELKTINISPTDTTVSLLSDCTEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2718
Query: 252 TWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G GRLG +PR+V V + + +G +++ G+++ WG
Sbjct: 2719 ACGEATNGRLGLGMSSGTVPIPRQVTALSSYVV--KKVAVHSGGRHATALTVDGKVFSWG 2776
Query: 311 KLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
+ GDD P+ + L +R + G+ H S +WG +Y
Sbjct: 2777 E----GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2832
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGY--GHSLVIVD 401
G LG+G + PK V +L G VI VACG +L + D
Sbjct: 2833 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P +++ L G + +A G S HCV EG YTWG N+ GQLG G R
Sbjct: 3905 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQR 3962
Query: 101 PTIVSELSKYKIKKAGAGRSHTV 123
P +V+ L K+ + G +HT+
Sbjct: 3963 PRLVAALQGRKVNRVACGSAHTL 3985
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 2946 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3003
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3004 PTLVQGLEGQKITRVACGSSHSVAWT 3029
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S VA+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
AG +H + +TED ++G N Q + + EPS + L + ACG A
Sbjct: 717 AGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA 776
Query: 175 WLSSVE 180
W S E
Sbjct: 777 WSSCSE 782
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G + + CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G +V +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
L +++G +++ L D+E N + ++ +P P
Sbjct: 703 -------LLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSL 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 29/337 (8%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G YTWGR + G+LGHGD + P + L+ I G HT V+ GN +G
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+G+LG G+ P V LV V ACG+ T ++S + G + G
Sbjct: 86 GMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTS--RGCLYTWGDKENGVA 143
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG D E + Q P+ + L+G+ +V+++ HT + G VYTWG
Sbjct: 144 GHG-DTEGH------------QYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGE 190
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
G +GRLGH +++ PR V+ + IS G +S+ G++Y +G ++
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQ----ISCGGFHSAVVTADGKMYTFGGGEHG 246
Query: 315 ---NGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
+GD KP + DL G L + G H S + +WG+ +G+LG+G G
Sbjct: 247 QLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGC-G 305
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+K S P+ V+ L G V+ VA H+ +V+ +V
Sbjct: 306 KKVST-PQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 32/305 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L G I V G S H AV +G +TWG G+LGHG++ P V
Sbjct: 50 PRLTHSLAGQVITHVTCG--SYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDS 107
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSE--V 163
L + G HT +VT G +G ++G G G ++ P + L + V
Sbjct: 108 LVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVV 167
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ACG T L+ + + G ++G+LGHG + ++ PR +
Sbjct: 168 QLSACGFH-TGCLT--DAGEVYTWGEGKFGRLGHGAERNCHS--------------PRLV 210
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L G+ V+++CG H+ V + G +YT+G G +G+LGH ++ ++ P V + V
Sbjct: 211 ETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK--DLDGV 268
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNN-GDDWMYPKPLMDLSGWNLRCMD 337
+ I+ G +S ++Y W GKL + G P+ + L G + C+
Sbjct: 269 FLTQ--ITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVA 326
Query: 338 SGNMH 342
S N H
Sbjct: 327 SYNEH 331
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G +G+ +P L L G R V H + G YTWG + G+LGHG +
Sbjct: 146 GDTEGHQYTPKLLERLSGK--RVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN 203
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P +V L + + G H+ VVT DG FG +HGQLG G N+++P+ V+
Sbjct: 204 CHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK 263
Query: 158 CLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +T CG +V L+S + G +G+LGHG + +T
Sbjct: 264 DLDGVFLTQITCGWSHSVALTSSH--EVYTWGNGDHGKLGHGCGKKVST----------- 310
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
P+ + L G+ +V VA HT +
Sbjct: 311 ---PQLVEKLVGQKVVCVASYNEHTACL 335
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
GR + N SP + L+G R V C H V +G+ YT+G E GQLGH
Sbjct: 193 FGRLGHGAERNCHSPRLVETLLGK--RPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
GDK+ + +PT+V +L + + G SH+V +T +G HG+LG G +
Sbjct: 251 GDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVST 310
Query: 153 PSPVRCLVSE 162
P V LV +
Sbjct: 311 PQLVEKLVGQ 320
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N V PT ++ L GV + + G H VA+ YTWG + G+LGHG + P
Sbjct: 255 NKVKPTLVKDLDGVFLTQITCG--WSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQ 312
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTE 127
+V +L K+ + HT + E
Sbjct: 313 LVEKLVGQKVVCVASYNEHTACLVE 337
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I ++ G H V +G Y WG N QLG+G Q P +
Sbjct: 63 IVPKKLEALCGKKISSLSYG-SGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 122 CTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 179
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V ACG T ++ V + G GQLG G + Q
Sbjct: 180 GKMVVGIACGQ--TSSMAVVSNGEVYGWGYNGNGQLGLGNNGN--------------QLT 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +AAL G I+++ACG HT+A+ +G +Y WG YG+LG + ++ P ++ + +
Sbjct: 224 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQI-MME 282
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ V+ A SA + S+ GQ+YMWG+ +
Sbjct: 283 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 314
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + +T + FG N LG+G ++ I P +
Sbjct: 11 TLLSPQEVASIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++++ + G+ V L + +G + G Y QLG+GT N+ T
Sbjct: 71 LCGKKISSLSYGSGPHVVLCTEDG-EVYAWGHNGYSQLGNGTTNQGITP----------- 118
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ G +Y WG+ G++G ++ PRRV
Sbjct: 119 --VQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---SNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 231 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMMEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 69 IVPKKLEALCGKKISSLSYG-SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQV 127
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 128 CTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 185
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V ACG T ++ V + G GQLG G + Q
Sbjct: 186 DKMVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--------------QLT 229
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +AAL G I+++ACG HT+A+ +G +Y WG YG+LG + ++ P ++ + +
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI-MME 288
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ V+ A SA + S+ GQ+YMWG+ +
Sbjct: 289 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 320
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + T + FG N LG+G ++ I P +
Sbjct: 17 TLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA 76
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++++ + G+ V L + +G + G Y QLG+G N+ T
Sbjct: 77 LCGKKISSLSYGSGPHVLLCTEDG-EVYAWGHNGYSQLGNGATNQGVTP----------- 124
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ G +Y WG+ G++G ++ PRRV
Sbjct: 125 --VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 181 ---SNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIMMEKERVV 293
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 294 EIAACHSAHT 303
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTC---WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
L +K++E G L F G ++ G+ N +P R+ + D
Sbjct: 131 LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ-DKMV 189
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C +AV G Y WG N GQLG G+ + P V+ L I + G +
Sbjct: 190 VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYA 249
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
HT+ +T++G A+G N +GQLG+G+ N++ P +
Sbjct: 250 HTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 285
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 144/340 (42%), Gaps = 30/340 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G WGRN GQLG+G P VS + + AG H++ +T
Sbjct: 98 HGLALTSAGTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSA 157
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G LA+G N GQLG GS + P V + V A A G D + L+S G ++L
Sbjct: 158 GTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTST-GPTLLTW 216
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG GT +T P A+ G T+ VA G +H++ + S
Sbjct: 217 GKNTRGQLGDGTTTGRDT--------------PVAVTLPPGVTVTSVAGGRDHSLVLTSD 262
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
WG +G+LG+ D VP V + I+AG ++S+ G +
Sbjct: 263 DTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTE----ATAIAAGRLHSAALTSEGAAF 318
Query: 308 MW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQY 359
W G+L N + D P + + L + + H V S + ++WG
Sbjct: 319 AWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANAN 378
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
GELG G +S+ P V + G V ++A G S+ +
Sbjct: 379 GELGDGSTTDRST--PVAVSLPAGTRVAAIAAGDDQSMAL 416
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 141/330 (42%), Gaps = 41/330 (12%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V WG N+ GQLG+G I P VS + + G H + +T G LA+
Sbjct: 52 VSDTILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAW 111
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G N GQLG+GS + P V + A A GAD ++ L+S +IL G +G
Sbjct: 112 GRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSA--GTILAWGDNTFG 169
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG-YVYT 252
QLG G+ + +T P A++ AG T+ +A G +H + + S G + T
Sbjct: 170 QLGDGSTTDRST--------------PVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLT 215
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AG--------SVNSSCTAG 302
WG G+LG P V LPP ++ AG + + + A
Sbjct: 216 WGKNTRGQLGDGTTTGRDTPVAV-------TLPPGVTVTSVAGGRDHSLVLTSDDTALAW 268
Query: 303 GGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYG 360
GG + G+L N D + P + +G + +G +H + ++ + +WGH G
Sbjct: 269 GGNSF--GQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRG 326
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+LG G S+ P V + + ++A
Sbjct: 327 QLGNG--STTDSSEPVAVSLPADTRLTAIA 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 109/250 (43%), Gaps = 23/250 (9%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIV 104
+P + G + +AAG H + + G TWG+N RGQLG G RD P V
Sbjct: 181 TPVAVSLPAGTTVAAIAAG--RDHNLVLTSTGPTLLTWGKNTRGQLGDGTTTGRDTPVAV 238
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
+ + GR H++V+T D +LA+G N GQLG+G+ + + P V +E
Sbjct: 239 TLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEA 298
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
TA A G + L+S EGA+ +G G G +T DSS +A P +
Sbjct: 299 TAIAAGRLHSAALTS-EGAAF------AWGHNGRGQLGNGSTTDSSEPVAVS-LPADTRL 350
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
A+AG ++H V + S G WG G LG D P V + V
Sbjct: 351 TAIAGR-------DSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSLPAGTRV 403
Query: 284 LPPEAVISAG 293
A I+AG
Sbjct: 404 ----AAIAAG 409
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 117/291 (40%), Gaps = 34/291 (11%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RS V D LA+G N GQLG+G++ + EP V A D L+
Sbjct: 45 RSAATAVVSD-TILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRH-GLAL 102
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
++L G GQLG+G+ +T P A++ G V VA G
Sbjct: 103 TSAGTVLAWGRNIEGQLGNGSTTSSST--------------PVAVSLPTGTRAVAVAAGA 148
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG-SVNS 297
+H++A+ S G + WG +G+LG D P V + V A I+AG N
Sbjct: 149 DHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTV----AAIAAGRDHNL 204
Query: 298 SCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
T+ G L WGK G D P + G + + G H V +D
Sbjct: 205 VLTSTGPTLLTWGKNTRGQLGDGTTTGRD--TPVAVTLPPGVTVTSVAGGRDHSLVLTSD 262
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ ++WG +G+LG G S +P V + G ++A G HS +
Sbjct: 263 DTALAWGGNSFGQLGNG--TTTDSLVPIAVALPTGTEATAIAAGRLHSAAL 311
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 140/337 (41%), Gaps = 36/337 (10%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
D WG N+ G+LG G P V + I AG H++ VT G +LA
Sbjct: 69 DASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALA 128
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQY 192
+G N GQLG GS + P V + VTA A G D ++ ++S A L G
Sbjct: 129 WGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTA--LAWGDNDR 186
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LG GT +T P + AG T+ +A G H++A+ S G V T
Sbjct: 187 GELGDGTTTRRDT--------------PVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLT 232
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WG G+LG D P VD+ V I+AGS++S G + WG
Sbjct: 233 WGLNSDGQLGDGTTTDSSTPIAVDLPAGTTV----TAIAAGSLHSLAVTTAGTILAWG-- 286
Query: 313 KNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
NN D + P + + + +D G H V + S ++WG G+L
Sbjct: 287 -NNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQL 345
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G +S+ P V++ V + G HSL +
Sbjct: 346 GDGT--TTNSSTPIAVNLPADTTVTATTAGSLHSLAV 380
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 148/357 (41%), Gaps = 38/357 (10%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G I +AAG H +AV G WG N GQLG G P V + +
Sbjct: 104 GTTITAIAAG--HDHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTA 161
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
AG H++ VT G +LA+G N G+LG G+ P V + VTA A G +
Sbjct: 162 IAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHS 221
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ L+S ++L GL GQLG GT T DSS +A + AG T+
Sbjct: 222 LALTSA--GTVLTWGLNSDGQLGDGT-----TTDSSTPIAVDLP---------AGTTVTA 265
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+A G+ H++AV + G + WG G+LG + P V++ + I G
Sbjct: 266 IAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTI----TAIDGG 321
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMHHF 344
+S G WG +N D + P + + + +G++H
Sbjct: 322 RDHSLAVTSAGSALAWG---DNDDGQLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHSL 378
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V + ++WG+ G LG G +S+ P V++ V + G HS+ +V
Sbjct: 379 AVTTAGTILAWGNNSDGRLGDGT--TTNSSTPIAVNLPADTTVTATTAGSAHSMALV 433
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 167/380 (43%), Gaps = 46/380 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVS 105
P +R L+GV ++ VA C H AVD G YTWG N++GQLGH + + P V+
Sbjct: 28 PRVVRALLGVPLKAVA--CGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVA 85
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLV-SEV 163
++ AG HT+ V E G+ +FG N GQLG G + EP V+ L ++V
Sbjct: 86 --MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKV 143
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A A G + ++ L++ G + + G G+LGHG+ SS++ PR +
Sbjct: 144 VAVAAGMEHSLALTA--GGEVYSWGNAANGRLGHGSATPRRLFGSSIEF------LPRLV 195
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
A + +V+ G H+ AV + G + WG+G + +LG +D P V
Sbjct: 196 RAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGP---------TV 246
Query: 284 LPP----EAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDWMYPKPLMDLSGWNLR 334
LPP A ++ GS++S GG + WG +N + PK + G +
Sbjct: 247 LPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPGVSAE 306
Query: 335 CMDSGNMHHFVGADSSCI---SWGHAQYGELGY----GPYGQKSSA------MPKKVDIL 381
+ +G H S + WG +Q L + G GQ P VD L
Sbjct: 307 QIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWL 366
Query: 382 EGMHVISVACGYGHSLVIVD 401
VACG H+ IV+
Sbjct: 367 SLTETDLVACGMNHTAAIVE 386
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 26/244 (10%)
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
L Y ++ PR + AL G + VACG HT AVD G VYTWG G+LGH + E
Sbjct: 20 LEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE-- 77
Query: 272 PRRVDVFQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY--P 322
V V PE V+ SAG ++ C G ++ + G+L D + P
Sbjct: 78 -----VGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREP 132
Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP------YGQKSSAMP 375
+ + L + + +G H + A SWG+A G LG+G +G +P
Sbjct: 133 RLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLP 192
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPP 435
+ V E + V V+ G HS + + G+ + +E++ + +PP
Sbjct: 193 RLVRAFEALRVEQVSAGQMHSAAV---STAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPP 249
Query: 436 KKGA 439
KG+
Sbjct: 250 LKGS 253
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 69 IVPKKLEALCGKKISSLSYG-SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQV 127
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 128 CTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 185
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V ACG T ++ V + G GQLG G + Q
Sbjct: 186 DKMVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--------------QLT 229
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +AAL G I+++ACG HT+A+ +G +Y WG YG+LG + ++ P ++ + +
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI-MME 288
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ V+ A SA + S+ GQ+YMWG+ +
Sbjct: 289 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 320
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + T + FG N LG+G ++ I P +
Sbjct: 17 TLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA 76
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++++ + G+ V L + +G + G Y QLG+G N+ T
Sbjct: 77 LCGKKISSLSYGSGPHVLLCTEDG-EVYAWGHNGYSQLGNGATNQGVTP----------- 124
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ G +Y WG+ G++G ++ PRRV
Sbjct: 125 --VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 181 ---SNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIMMEKERVV 293
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 294 EIAACHSAHT 303
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 4 LEAEKMVEEETGKEKGGELLFCGSTC---WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
L +K++E G L F G ++ G+ N +P R+ + D
Sbjct: 131 LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ-DKMV 189
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C +AV G Y WG N GQLG G+ + P V+ L I + G +
Sbjct: 190 VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYA 249
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
HT+ +T++G A+G N +GQLG+G+ N++ P +
Sbjct: 250 HTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 285
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 121/260 (46%), Gaps = 23/260 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDV 277
YG+LG + ++ P V V
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV 305
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 134/287 (46%), Gaps = 32/287 (11%)
Query: 50 LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
LRP+ + ++F+AA H +A+ G Y+WG N+RGQLGH + + P ++
Sbjct: 405 LRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIE 464
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
L K+ A H+ V+T+ G FG N GQLG +++ P V+ L +EV+
Sbjct: 465 SLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVS 524
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG T+ ++ + G YGQLG LA+ Q + +
Sbjct: 525 MVACGLYHTIICTA--AGELFTCGKNDYGQLG---------------LAHNRQIKLPTLV 567
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL E + VACG H+V V + G +++G YG+LG + + VP V + ++
Sbjct: 568 ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMV 627
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPL 325
+ G ++ + GQ+Y++G+ L N G D + P PL
Sbjct: 628 RA----TCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPL 670
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + G YT+G N+ GQLG + P +V L ++ G HT++ T
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAA 539
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G G N +GQLG R P+ V V+ ACG +V +S+ G + G
Sbjct: 540 GELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVST--GGRAFSFG 597
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG G+ N P +A + +V+ CG HTV + +G
Sbjct: 598 RNDYGQLGIGSKVHQNV--------------PNVVALSSNTRMVRATCGCYHTVLLSEQG 643
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
VY +G G+LG+R D +P + V N
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 677
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 147/342 (42%), Gaps = 31/342 (9%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
+ G Y+ G+N G+LG GD I+R + T VS I++ +G V+T +G L
Sbjct: 325 EASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLT 384
Query: 134 FGWNKHGQLGSGSIRNEIEP-SPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGL 189
G NK GQ G G + PV+ L S+ A + G + + L+ A + G
Sbjct: 385 CGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLA--YSWGY 442
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
GQLGH ++ + K+ P+ I +L + + + +H+ + G
Sbjct: 443 NDRGQLGH--------ENLATKIHV-----PKLIESLKDKKLGFASVSYHHSAVITDAGE 489
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM- 308
+YT+G G+LG + + P+ V + V ++++ G ++ G+L+
Sbjct: 490 LYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEV----SMVACGLYHTIICTAAGELFTC 545
Query: 309 ----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELG 363
+G+L + + L+ L + + G H V + S+G YG+LG
Sbjct: 546 GKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G ++ +P V + ++ CG H++++ ++ V
Sbjct: 606 IGSKVHQN--VPNVVALSSNTRMVRATCGCYHTVLLSEQGQV 645
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GEL CG + +G A + + PT L L + FVA G H V V GR
Sbjct: 539 AGELFTCGKNDYGQLGL---AHNRQIKLPT-LVALPNEMVSFVACGYY--HSVVVSTGGR 592
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+++GRN+ GQLG G K+ ++ P +V+ S ++ +A G HTV+++E G FG N
Sbjct: 593 AFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNN 652
Query: 139 HGQLGSGSIRNEIEPSPVR 157
GQLG+ + + P P++
Sbjct: 653 KGQLGNRGSADALLPVPLK 671
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H +A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3283
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H + +T DG ++G G+LG S
Sbjct: 3026 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + ++S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H D+ + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3012
Query: 130 NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
A G +G+LG SG++ + + + V + A G + L +V+G +
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 3070
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH + + +PR I AL + I +ACG++H+ A+
Sbjct: 3071 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 3172
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ W GKL G + P+ + L+G + ++ G S + +WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3233 GDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + + G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVVD----VAAGSTHCLALTEDSEVHSWG 735
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+AL AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +D+ +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G V+ VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV 731
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRP-----------------TI--------VSELSK 109
G Y WG N RGQLG G K++ P T+ V L
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014
Query: 110 YKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
Y++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
CG+ F+V L+ + ++ G Y +LGHG+D+ RPR + L
Sbjct: 4075 ECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVR--------------RPRQVQGL 4118
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4119 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4171
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR +A G S H A+ G YTWG E G+LGHGD + +P +V L +++ +
Sbjct: 3102 IRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159
Query: 118 GR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G + T+ +T++G ++G G+LG G P + L + V CGA F++
Sbjct: 3160 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSL 3219
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYN-------------------------TKDSS 209
L+ + + G Y +LGHGTD D+
Sbjct: 3220 ALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG 3277
Query: 210 VKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
A+ +P + L G+ I +VACG++H+VA
Sbjct: 3278 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ AL G ++ +ACG+ T+ + V++WG G YG+LG VP ++D
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLR 334
V+ + GS S G +Y WGK L + DD + P+ + L G +
Sbjct: 4069 LGVVK----VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4124
Query: 335 CMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ +G++H D +WG G+LG G + P+ V L+G + VACG
Sbjct: 4125 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKINRVACGS 4182
Query: 394 GHSL 397
H+L
Sbjct: 4183 AHTL 4186
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4051 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4107
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4108 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4167
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L ++ ACG+ T+ S+ + A NA G+L EYN
Sbjct: 4168 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4208
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
++ L G + +A G + + + ++WG + G+LG G P + L+
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 4067
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
+ K G +V +T+ G +G + +LG GS + P V+ L +V A A
Sbjct: 4068 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4127
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G+ V E + G GQLG GT N A RPR +AAL
Sbjct: 4128 TGSLHCV--CCTEDGEVYTWGDNDEGQLGDGTTN--------------AIQRPRLVAALQ 4171
Query: 228 GETIVKVACGTNHTVA 243
G+ I +VACG+ HT+A
Sbjct: 4172 GKKINRVACGSAHTLA 4187
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S VA+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVA 716
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG 169
AG +H + +TED ++G N Q + EP+ + L + ACG
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 33/257 (12%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE KM+ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
+ K G +V +T+DG ++G + +LG G+ + P + L +V
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDV 715
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G+ T L+ E + + + G N+ ++++ +P P A+ L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPTALPGL 759
Query: 227 AGETIVKVACGTNHTVA 243
+ IV +ACG + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 31/329 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WGR E GQ G+G ++ P V L + + G HTVV+TED + ++G
Sbjct: 9 YSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDD 68
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG + P V L + + CG+ T +S ++ G YG+LGHG
Sbjct: 69 GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDT--GALWTWGGGMYGKLGHG 126
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
NE P P + A G + ++ACG+ HT A+ + G VY WG
Sbjct: 127 --NEV------------GHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDREN 172
Query: 259 GRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G G E + +++P++++ + + I+A +++ G L+ WG+ K
Sbjct: 173 GVCGIGEAAEHQYLPKKLEALKGVKITQ----IAACGFHTAAITQDGALWSWGEGKFGRL 228
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N + + P + L G ++ + G H V D +++G ++G+LG+G +
Sbjct: 229 GQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGD--KT 286
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +P V LEG ++ V CG+ H++ +
Sbjct: 287 NRTVPCLVKALEGAGIVQVTCGWSHTVTL 315
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 137/287 (47%), Gaps = 33/287 (11%)
Query: 130 NSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILN 186
+S+ + W + GQ G+GS ++ P PV L V ACG+ TV L+ E + +
Sbjct: 5 DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLT--EDKDVWS 62
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G G+LGH DN + + P ++AL G++I +V CG+ HT A+
Sbjct: 63 WGRGDDGRLGH-ADNHW-------------KYVPHLVSALTGKSIKQVTCGSYHTAAISD 108
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G ++TWG G YG+LGH + P RV+ F V I+ GS +++ GG++
Sbjct: 109 TGALWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGREV----EQIACGSRHTAALLAGGEV 164
Query: 307 YMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQ 358
Y WG +N + PK L L G + + + H + D + SWG +
Sbjct: 165 YCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGK 224
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G LG G +K+ P V+ L+G+ V VACG HS + + +V
Sbjct: 225 FGRLGQG--NEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDV 269
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 36/360 (10%)
Query: 52 PLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
P+ G+ + V C S H V + + ++WGR + G+LGH D + P +VS L+
Sbjct: 32 PVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGK 91
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRC---LVSEVTAT 166
IK+ G HT +++ G +G +G+LG G NE+ P+P R + EV
Sbjct: 92 SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHG---NEVGHPAPCRVEAFIGREVEQI 148
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG+ T L + G + G + G G G A E Q P+ + AL
Sbjct: 149 ACGSRHTAAL--LAGGEVYCWGDRENGVCGIGE-------------AAEHQYLPKKLEAL 193
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G I ++A HT A+ G +++WG G +GRLG +K++ P V+ Q V
Sbjct: 194 KGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQ- 252
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGN 340
++ G +S+C G + +G ++ +GD + P + L G + + G
Sbjct: 253 ---VACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGW 309
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + D ++G+ +G+LG+G SA+PK V+ L M V VA H++ +
Sbjct: 310 SHTVTLSEDGKVFTFGNGDHGKLGHGA--NAKSALPKLVESLANMKVAKVASYNEHTVAL 367
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L GV I +AA H A+ +G ++WG + G+LG G++ + P V
Sbjct: 187 PKKLEALKGVKITQIAA--CGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L ++K+ G H+ VTEDG+ L FG +HGQLG G N P V+ L + +
Sbjct: 245 LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQ 304
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
CG TV LS E + G +G+LGHG N K + P+ + +
Sbjct: 305 VTCGWSHTVTLS--EDGKVFTFGNGDHGKLGHGA----NAKSA----------LPKLVES 348
Query: 226 LAGETIVKVACGTNHTVAV 244
LA + KVA HTVA+
Sbjct: 349 LANMKVAKVASYNEHTVAL 367
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N V+P + L GV ++ VA G CV D G T+G E GQLGHGDK R P
Sbjct: 235 NQVTPCCVEGLQGVRVKQVACGGFHSACVTED--GDVLTFGGGEHGQLGHGDKTNRTVPC 292
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
+V L I + G SHTV ++EDG FG HG+LG G+ P V L +
Sbjct: 293 LVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANM 352
Query: 162 EVTATACGADFTVWLSSVE 180
+V A + TV L E
Sbjct: 353 KVAKVASYNEHTVALCHAE 371
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--GDKIQRDRPT 102
V P R+ L + +A G H VAV G +WG +E GQLG G+ + +P
Sbjct: 76 VVPIRVAALDTHMVTHIACGFK--HTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPR 133
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
IV + AG HT+ +T G+ +FG G LG G++ PS V+ L
Sbjct: 134 IVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGL 193
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VT ACG + + L+ V+G + G +YGQLGHG+ ++KL P
Sbjct: 194 GVTQIACGENHSAALT-VDG-KVFTWGRGKYGQLGHGSTQ-------NIKL-------PV 237
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
A+ AL ++++ACG +HT+A+ S G +++WG G +G+ GH ++D P++V +
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGR 297
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ +SAG+ ++ G++Y WG
Sbjct: 298 VLVQ----VSAGARHTVVLLDRGEVYGWG 322
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 158/363 (43%), Gaps = 72/363 (19%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L LVG DI +AA H + EG YT G N+ GQLG ++ P V+
Sbjct: 25 TPTSLSTLVGKDIVHIAAS--DYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVA 82
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVR-CLVSE 162
L + + G HTV VTE G ++G +++GQLG SG+I + ++P V+
Sbjct: 83 ALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLH 142
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ A G T+ L+ + + G G LGHG + +T P
Sbjct: 143 FSRVAAGGYHTLALTG--SGDVYSFGDGSSGALGHGNLDGCST--------------PSL 186
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ +L G + ++ACG NH+ A+ G V+TWG G YG+LGH ++ +P V ++
Sbjct: 187 VKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHD 246
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
V+ I+ G ++ G+L+ WG
Sbjct: 247 VIQ----IACGGDHTLAITSDGRLFSWG-------------------------------- 270
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
H +G+ G+G ++ PK+V LEG ++ V+ G H++V++DR
Sbjct: 271 -------------HGLWGQTGHGT--KEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDR 315
Query: 403 TNV 405
V
Sbjct: 316 GEV 318
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 42 GNLVSPTRLRPLVGV-DIRF--VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN+V + R + G D+ F VAAG H +A+ G Y++G G LGHG+
Sbjct: 124 GNIVDGVQPRIVKGSRDLHFSRVAAG--GYHTLALTGSGDVYSFGDGSSGALGHGNLDGC 181
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P++V L + + G +H+ +T DG +G K+GQLG GS +N P V+
Sbjct: 182 STPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKA 241
Query: 159 LVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
LV +V ACG D T+ ++S + + G +GQ GHGT E
Sbjct: 242 LVDHDVIQIACGGDHTLAITS--DGRLFSWGHGLWGQTGHGTK--------------EDV 285
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
P+ + L G +V+V+ G HTV + +G VY WG
Sbjct: 286 LSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWG 322
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G LDG +P+ ++ L G+ + +A C H A+ V+G+ +TWGR + GQLGHG
Sbjct: 175 HGNLDG-CSTPSLVKSLWGLGVTQIA--CGENHSAALTVDGKVFTWGRGKYGQLGHGSTQ 231
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
P V L + + + G HT+ +T DG ++G GQ G G+ + + P V
Sbjct: 232 NIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291
Query: 157 RCLVSEVTA-TACGADFTVWL 176
L V + GA TV L
Sbjct: 292 HQLEGRVLVQVSAGARHTVVL 312
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ + WG + G+LGH ++
Sbjct: 65 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMN 124
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 125 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 184
Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 185 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 233
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 234 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 290
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 291 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 36/340 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 11 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 68
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG +G G+LG S N +P
Sbjct: 69 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKP 128
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 129 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DN----------- 174
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 175 --TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 232
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
+P+ ++ V I G+ S G ++ WGK +G D KP
Sbjct: 233 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 288
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
+ L G + + G +H DS + +WG +G+ G
Sbjct: 289 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 218 PRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P PR I AL+ + KVA G H A+ G V+ WG G G+LGH + + PR +
Sbjct: 72 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLI 131
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGW 331
+ + + I+ GS +S+ G+LY WG + +GD+ KP M
Sbjct: 132 EALKTKRIRD----IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 187
Query: 332 NLRCMD----SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
R + S + D + SWG +G+LG G G + +P+ ++ L G V
Sbjct: 188 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGV 245
Query: 387 ISVACGYGHSLVI 399
+ CG SL +
Sbjct: 246 CQIECGAQFSLAL 258
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
N KD L P L+ +V+VA G+ AV +G VY G GRLG
Sbjct: 4 LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLG 63
Query: 263 HREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
+PR++ + V+ AV S G ++ T G+++ WG+ GDD
Sbjct: 64 LGISSGTVPIPRQITALS-SYVVKKVAVHSGGRHATALTV-DGKVFWWGE----GDDGKL 117
Query: 322 ----------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
P+ + L +R + G+ H S +WG +YG LG+G
Sbjct: 118 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--NT 175
Query: 371 SSAMPKKVDILEGMHVISVACG 392
+ PK V +L G VI VACG
Sbjct: 176 TQLKPKMVKVLLGHRVIQVACG 197
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 29/288 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
HC+A+ G Y WG + G+LG G+++ +P +V LS I G H+ ++
Sbjct: 3644 HCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRY 3703
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G+ +G ++G+LG G + + P V+ L++ V ACG+ + ++ +
Sbjct: 3704 GHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSW 3763
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LGH E+ P I +L+G+ I+++ CG+ +VA+ +
Sbjct: 3764 GDGDYGKLGHNIS--------------ESCKLPCKIESLSGKGIIQIDCGSQFSVALSAN 3809
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G +YTWG G Y RLGH + P+ V Q ++ S GS++ G++Y
Sbjct: 3810 GTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQ----FSTGSLHVLALTDDGEVY 3865
Query: 308 MWGKLKNN----GDDWMY----PKPLMDLSGWNLRCMDSGNMHHFVGA 347
WG N+ GD + P+P+ L G ++ + G+ H F A
Sbjct: 3866 AWG--DNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWA 3911
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 24/293 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA-LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G++ CG D+ G R G G + SP ++ L I+ VA H +A+ ++G+
Sbjct: 2645 GKVFVCG----DSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGK 2700
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+WG E G+LGHGD + D P ++ L ++ G +H+ +T DG +G +
Sbjct: 2701 VLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ 2760
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
+G+LG ++ P V+ V +T ACG+ L+ ++ + G +G+LG
Sbjct: 2761 YGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + T P+ + L G +V++ CG +VA+ + G V+TWG G
Sbjct: 2821 GGSDGCCT--------------PQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGE 2866
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y RLG + E V R V Q V I+ G+++ + G +Y WG
Sbjct: 2867 YYRLG--LGRGEHVRRPTLVNQLKLVTIDH--IAVGTLHCIAVSTQGDVYCWG 2915
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 144/334 (43%), Gaps = 32/334 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQL D Q +P LS K + G VT G A G+ +
Sbjct: 3547 YVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTES 3606
Query: 140 GQLGSGSIRNE----IEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G + + P V+ L + + A G + LS+ + G G+
Sbjct: 3607 GRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTT--GEVYAWGDGDDGK 3664
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G ++ +P+ + +L+ + I+ +ACG H+ A+ G++YTWG
Sbjct: 3665 LGLGNRVTHS--------------KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWG 3710
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
G YGRLGH + +D P+ V +V+ + +G + C ++ W
Sbjct: 3711 KGRYGRLGHGDYEDYLYPKLVQGLINYHVV--KVACGSGDAQTMCVTSDDNVWSWGDGDY 3768
Query: 310 GKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
GKL +N + P + LSG + +D G+ + A+ + +WG Y LG+G
Sbjct: 3769 GKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHG-- 3826
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ PK V L+G ++ + G H L + D
Sbjct: 3827 SSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD 3860
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 146/345 (42%), Gaps = 44/345 (12%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRD----RPTIVSELSKYKIKKAGAGRSHTVVVT 126
AV G+ Y G E G+LG G ++ P +V L+ +G H + ++
Sbjct: 3590 FAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALS 3649
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASIL 185
G A+G G+LG G+ +P V+ L + + ACG + +S +
Sbjct: 3650 TTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAIS--RYGHLY 3707
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT--NHTVA 243
G +YG+LGHG YE P+ + L +VKVACG+ T+
Sbjct: 3708 TWGKGRYGRLGHGD--------------YEDYLYPKLVQGLINYHVVKVACGSGDAQTMC 3753
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
V S V++WG G YG+LGH + +P +++ ++ I GS S +
Sbjct: 3754 VTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ----IDCGSQFSVALSAN 3809
Query: 304 GQLYMWGKLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G LY WGK GD + PKP+ L G + +G++H + D
Sbjct: 3810 GTLYTWGK----GDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVY 3865
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+WG G+LG G A P+ + L+G + V+CG HS
Sbjct: 3866 AWGDNDEGQLGDG--TAHPIARPRPIAALKGKRIQQVSCGSAHSF 3908
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 156/343 (45%), Gaps = 38/343 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ VD E Y WG N++GQLG +G K++ RPT L+ K + G +V+ +
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVK--RPTFNEALTALKPIEIVGGSKSLFIVSNE 2644
Query: 129 GNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G G + G+LG G + + + + V + A G + L S++G +L
Sbjct: 2645 GKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMAL-SLDG-KVL 2702
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G + G+LGHG + T D+ P+ I +L + + +ACG+ H+ A+
Sbjct: 2703 SWGDGEDGKLGHG---DILTLDT-----------PKLIDSLLAKRVFYIACGSAHSAAIT 2748
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +YTWG G YGRLGH ++ + P+ V F N+ ++ GS ++ A
Sbjct: 2749 SDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNI----TQVACGSRDAQTLALDSE 2804
Query: 304 GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
G +Y W GKL G D P+ + L G + ++ G + A +WG
Sbjct: 2805 GNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGK 2864
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+Y LG G + P V+ L+ + + +A G H + +
Sbjct: 2865 GEYYRLGLG--RGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 23/243 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
L +P + L+ + ++A G S H A+ +G YTWG+ + G+LGH D++ + P +
Sbjct: 2720 LDTPKLIDSLLAKRVFYIACG--SAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKL 2777
Query: 104 VSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
V E I + G + T+ + +GN ++G G+LG G P V LV
Sbjct: 2778 VKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVG 2837
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V CGA F+V L++ + G +Y +LG G E RP
Sbjct: 2838 HRVVQIECGAQFSVALTAT--GQVWTWGKGEYYRLGLGRG--------------EHVRRP 2881
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L TI +A GT H +AV ++G VY WG +G+ G+ PR V F
Sbjct: 2882 TLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNF-- 2939
Query: 281 NNV 283
NN+
Sbjct: 2940 NNI 2942
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 103/288 (35%), Gaps = 43/288 (14%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
+AV +G Y+WG NE G LGHG K P + SK + G+ VTEDG
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNA 187
+ W K + E+ S +SE V+ +CG+ L+ + +
Sbjct: 565 K--LYMWGKILHSSNCCYTPELVKS-----ISEWHVSKVSCGSSINNTLALSREGYVFSF 617
Query: 188 GLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
+Y G D++ N S + YE IV + C + +D
Sbjct: 618 ---EYRNSDRGCDDKSLNVIPSMIVFDYE---------------IVSIYCHNDVNAVIDC 659
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V+TWG G LGH P+ V V +S GQ+
Sbjct: 660 ANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQV----TSLSLADDYILALTDTGQV 715
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
Y WG+L N P ++C+ + + + + C +W
Sbjct: 716 YCWGQLDNENTTQCRP----------VKCLMNRQVKKIACSPNQCFAW 753
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G I + C S VA+ G YTWG+ + +LGHG +P VS
Sbjct: 3782 PCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSG 3839
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI + G H + +T+DG A+G N GQLG G+ P P+ L +
Sbjct: 3840 LQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQ 3899
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+CG+ + +S E N+ P L + E++ + +L +
Sbjct: 3900 VSCGSAHSFAWASEEACHTDNST-PTTIPLEYDILQEFSVHELRNRLIF 3947
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 19/201 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+ + VA G + V + ++WG + G+LGH P +
Sbjct: 3726 LYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKI 3785
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
LS I + G +V ++ +G +G + +LG GS + +P PV L +
Sbjct: 3786 ESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKI 3845
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--RPRA 222
V L+ + + G GQLG GT A P RPR
Sbjct: 3846 VQFSTGSLHV-LALTDDGEVYAWGDNDEGQLGDGT----------------AHPIARPRP 3888
Query: 223 IAALAGETIVKVACGTNHTVA 243
IAAL G+ I +V+CG+ H+ A
Sbjct: 3889 IAALKGKRIQQVSCGSAHSFA 3909
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
++ D V+ C + +D +TWGR LGH + + +RP V LS ++
Sbjct: 637 MIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQV 696
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
+ + +T+ G + W GQL + N + PV+CL++ +V AC +
Sbjct: 697 TSLSLADDYILALTDTGQ--VYCW---GQLDN---ENTTQCRPVKCLMNRQVKKIACSPN 748
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 27/206 (13%)
Query: 52 PLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
P+V + V C C AV +G+ Y WG+ + H P +V +S++
Sbjct: 538 PIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGK-----ILHSSNCCY-TPELVKSISEW 591
Query: 111 KIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
+ K G S +T+ ++ +G +F + ++ G + PS + E+ + C
Sbjct: 592 HVSKVSCGSSINNTLALSREGYVFSFEY-RNSDRGCDDKSLNVIPSMI-VFDYEIVSIYC 649
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
D + ++ G LGH N RP+ + L+G
Sbjct: 650 HNDVNAVIDC--ANNVFTWGRGNNNMLGHNNSFRVN--------------RPKEVKFLSG 693
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWG 254
+ + ++ ++ +A+ G VY WG
Sbjct: 694 KQVTSLSLADDYILALTDTGQVYCWG 719
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+L+ + + + G+ ++G LGHG Y + P P I A + +V V
Sbjct: 504 YLAVTQKGEVYSWGVNEFGALGHGQ-------------KYSSFPTPEPIVAFSKLIVVMV 550
Query: 235 ACGTNHTVAVDSKGYVYTWG 254
+CG + AV G +Y WG
Sbjct: 551 SCGKDFCAAVTEDGKLYMWG 570
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 166/399 (41%), Gaps = 55/399 (13%)
Query: 46 SPTRLRPLVGV--DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+P +R GV D +V H +A+ +G Y WG N+ GQLG+ K P
Sbjct: 602 TPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVR 661
Query: 104 VSELSK-------YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
V + + K + AG H++ + +G A+GWN +G+LG+ S + P V
Sbjct: 662 VRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRV 721
Query: 157 RCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
R S + A A + L+ GL YGQLG+ + N+ V
Sbjct: 722 RDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSK---NSSSFPV 778
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
++ A P A G V+V+ G +H++AV S GY Y WG YG+LG+ D
Sbjct: 779 RVRDFASPN----DANKGLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDST 834
Query: 271 VPRRVDVFQRNNVLPPEA-------VISAGSVNSSCTAGGGQLYMWG--KLKNNGD---- 317
VP RV R+ P +A I+AG +S G Y WG + GD
Sbjct: 835 VPVRV----RDPTSPKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTS 890
Query: 318 DWMYPKPLMDLS-------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
+ P P+ D + G G+ H VG++ +WG YG+LG G
Sbjct: 891 NSSVPVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDG--TT 948
Query: 370 KSSAMPKKVDILEGMHVISVACGY----GHSLVIVDRTN 404
S +P V +L + + A + G +L V +N
Sbjct: 949 DDSNVP--VSVLFNLQPVITAARFDTSPGTNLASVSNSN 985
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 49/381 (12%)
Query: 58 IRFVAAGCVSCHC----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE----LSK 109
IRF G + +AV +G+ Y WG N GQLG R P IV + +
Sbjct: 556 IRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTD 615
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-------- 161
+ + AG+ H++ + DG A+G N+HGQLG+ + N P VR +
Sbjct: 616 FTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGL 675
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ + G + ++ L S + G G+LG+ + T DSSV + P
Sbjct: 676 KAIQVSAGDEHSLALDS--NGYVYAWGWNDNGRLGNNS-----TTDSSVPVRVRDPASPT 728
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ G V+V+ G +H++AV S GY Y WG YG+LG+ + P RV F
Sbjct: 729 DPS--KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASP 786
Query: 282 NVLPP--EAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLS-- 329
N +AV +SAG +S G Y WG L N G D P + D +
Sbjct: 787 NDANKGLKAVQVSAGYSHSLAVGSDGYTYAWG-LNNYGQLGNSNTVDSTVPVRVRDPTSP 845
Query: 330 -----GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK-----V 378
G +++G H VG + +WG Y +LG G S +P +
Sbjct: 846 KDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPA 905
Query: 379 DILEGMHVISVACGYGHSLVI 399
D +G+ + G HSL +
Sbjct: 906 DASKGLQATRFSVGDHHSLAV 926
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 145/353 (41%), Gaps = 66/353 (18%)
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV----VTEDGNSLAFGWNKHGQLGS 144
QLGH + T S + + G + +T V V DG + A+G N +GQLG
Sbjct: 539 QLGH----ETTTITPPDSTSGIRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGD 594
Query: 145 GSIRNEIEPSPVRCLVSEVTATACGADFTV-------WLSSVEGAS--ILNAGLPQYGQL 195
+ + P+ VR T DFT W S G+ + G Q+GQL
Sbjct: 595 ATTNSRSTPNIVR------KPTGVPTDFTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQL 648
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ T +SSV + P G ++V+ G H++A+DS GYVY WG+
Sbjct: 649 GNNTKT-----NSSVPVRVRDPANP--TDPNKGLKAIQVSAGDEHSLALDSNGYVYAWGW 701
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYM 308
GRLG+ D VP RV R+ P + +SAG +S G Y
Sbjct: 702 NDNGRLGNNSTTDSSVPVRV----RDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYA 757
Query: 309 WGKLKNNG-------DDWMYPKPLMDLSGWN-----LRCMD--SGNMHHF-VGADSSCIS 353
WG L N G + +P + D + N L+ + +G H VG+D +
Sbjct: 758 WG-LNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYTYA 816
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKV-------DILEGMHVISVACGYGHSLVI 399
WG YG+LG S +P +V D +G+ ++ G HSL +
Sbjct: 817 WGLNNYGQLGNS--NTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAV 867
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
RPL+ C H +AV +G +TWGRN+ GQLGHGD P V L K
Sbjct: 45 RPLIYSMPSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKK 104
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPV-RCLVSEVTATAC 168
KA AG H++V+TE AFG N GQLG S ++ P V R S V C
Sbjct: 105 ICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITC 164
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G ++ L E + + G GQLG G Y + P P +
Sbjct: 165 GYSHSMALLKSE--QLYSWGRNDCGQLGLGH--------------YRSSPVPEHLTMFKK 208
Query: 229 ETIVKVACGTNHTVAVDSKGY---------VYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ +++CG +H +A S+ VYTWG G G+LGH E VP+ V
Sbjct: 209 SQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLL 268
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDD 318
+ ++AG +S+ QLY WG + +GDD
Sbjct: 269 ARGI----RAVAAGGFSSAAIDEAKQLYTWGCSREGQLGHGDD 307
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 139/324 (42%), Gaps = 38/324 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR------DRPTIVSELSKYKIKK 114
V A C H VA+ EGR Y+WG G LGHG+ + DRP I S S I
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPS---ITT 56
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFT 173
G HT+ V +DG +G N++GQLG G + P V L ++ A G +
Sbjct: 57 IACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHS 116
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ L+ E + G +GQLG + +Y+ P ++ L +
Sbjct: 117 LVLT--EANKVYAFGSNVFGQLGLESKVKYSAA-------------PDIVSRLRRSGVCH 161
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ CG +H++A+ +Y+WG G+LG + VP + +F+++ V
Sbjct: 162 ITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHN 221
Query: 294 SVNSSCTAGGG-----QLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMH 342
S AG G ++Y WG+ + G D +Y PK + L +R + +G
Sbjct: 222 IAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFS 281
Query: 343 H-FVGADSSCISWGHAQYGELGYG 365
+ +WG ++ G+LG+G
Sbjct: 282 SAAIDEAKQLYTWGCSREGQLGHG 305
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 28/243 (11%)
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG TV L+ E + + G G LGHG +S +L +A RP +
Sbjct: 4 ACGKLHTVALT--EEGRVYSWGCAN-GALGHG--------NSKSQLLPKALDRPLIYSM- 51
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+I +ACG HT+AV G ++TWG YG+LGH + K +PRRV+ ++ +
Sbjct: 52 --PSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKA 109
Query: 287 EA-------VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
A + A V + + GQL + K+K + P + L + + G
Sbjct: 110 AAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAA----PDIVSRLRRSGVCHITCG 165
Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
H S + SWG G+LG G Y +SS +P+ + + + V ++CGY H++
Sbjct: 166 YSHSMALLKSEQLYSWGRNDCGQLGLGHY--RSSPVPEHLTMFKKSQVQQISCGYDHNIA 223
Query: 399 IVD 401
V
Sbjct: 224 FVS 226
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV--LPPEAV 289
V ACG HTVA+ +G VY+WG G LGH K + +P+ +D R + +P
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALD---RPLIYSMPSITT 56
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHH 343
I+ G ++ G L+ WG+ + +GD + P + C+ +G H
Sbjct: 57 IACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHS 116
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V +++ + ++G +G+LG K SA P V L V + CGY HS+ ++
Sbjct: 117 LVLTEANKVYAFGSNVFGQLGL-ESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALL 173
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
P ++ L+ IR VAAG S A+D + YTWG + GQLGHGD I
Sbjct: 261 PKVVQTLLARGIRAVAAGGFSS--AAIDEAKQLYTWGCSREGQLGHGDDI 308
>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oryzias latipes]
Length = 397
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 151/359 (42%), Gaps = 62/359 (17%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+TWG N GQLG G + P + VSEL I+ G HT V+TE G G N
Sbjct: 11 HTWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQN 70
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G + VT ACG DF++ L+ EG +L G +GQLG
Sbjct: 71 HKGQLGIGHCADIATFQICPIFNQRVTDVACGWDFSLLLT--EGGRLLACGSNAFGQLGV 128
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + V++ + E IV VA G H++AV+ G VY WG G
Sbjct: 129 GETVTHIADPLLVEVRFH-------------EPIVSVAAGLRHSLAVNDSGCVYQWGNGL 175
Query: 258 YGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----- 310
+ + +E + D+ + ++ V ++ AGS + C G+L++WG
Sbjct: 176 FSHVDDKEMRTGDKCLSQKKSV-----------LVKAGSAHCVCLTEEGELFLWGSNKHE 224
Query: 311 KLKNNGDDWMYPKPLMD--LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG---- 363
+L + P PL L+G + + SG H +S +WG YG+LG
Sbjct: 225 QLGTSESFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNS 284
Query: 364 -------------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
G ++ P +V +L G IS CG H+L + VG+RL
Sbjct: 285 DSQTPEELLAGFITGTSQSRAVCCPAEVHVLRGATQIS--CGSEHNLAV-----VGDRL 336
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 136/381 (35%), Gaps = 93/381 (24%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI-VSELSKYKIKKAGAGRSHTVVVTE 127
H + G + G+N +GQLG G D T + + ++ G ++++TE
Sbjct: 54 HTAVITEGGEVFVCGQNHKGQLGIGHC--ADIATFQICPIFNQRVTDVACGWDFSLLLTE 111
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE-VTATACGADFTVWLS-------- 177
G LA G N GQLG G I +P V E + + A G ++ ++
Sbjct: 112 GGRLLACGSNAFGQLGVGETVTHIADPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQW 171
Query: 178 --------------------SVEGASILNAG------LPQYGQLGHGTDNEYNTKDSSVK 211
S + + ++ AG L + G+L N++ +S
Sbjct: 172 GNGLFSHVDDKEMRTGDKCLSQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSE- 230
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
++ P P + L GE + V G +H +A G V+TWG G YG+LG R D
Sbjct: 231 -SFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLG-RPNSDSQT 288
Query: 272 PRRVDV-F------QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
P + F R P E + G+ SC
Sbjct: 289 PEELLAGFITGTSQSRAVCCPAEVHVLRGATQISC------------------------- 323
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
G+ H+ +SWG ++G G G Q + P ++ +
Sbjct: 324 --------------GSEHNLAVVGDRLLSWGWNEHGMCGNGF--QTNVLHP---GLISNL 364
Query: 385 HVISVACGYGHSLVIVDRTNV 405
+ V CG GHS+ + R V
Sbjct: 365 RAVLVGCGAGHSMAVCTRITV 385
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 28/170 (16%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLR--PLVGVDIRFVAAGCVSCHCVAVDVEG 77
GEL GS + +G + L SPT LR L G + V +G H +A G
Sbjct: 213 GELFLWGSNKHEQLGTSESFLP----SPTPLRRSLLNGEKVSNVWSG--WSHIIAQTESG 266
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVS----------------ELSKYK-IKKAGAGRS 120
R +TWGR + GQLG + + +++ E+ + + G
Sbjct: 267 RVFTWGRGDYGQLGRPNSDSQTPEELLAGFITGTSQSRAVCCPAEVHVLRGATQISCGSE 326
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
H + V D L++GWN+HG G+G N + P + L CGA
Sbjct: 327 HNLAVVGD-RLLSWGWNEHGMCGNGFQTNVLHPGLISNL--RAVLVGCGA 373
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 148/353 (41%), Gaps = 31/353 (8%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G I +AAG H +A+ G WG N RGQLG G R P V + I
Sbjct: 89 GTTITALAAG--GSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVTVGLPAGTTITA 146
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
AGR H++ +T+ G LA+G N +GQLG G+ P V L + T TA A T
Sbjct: 147 LAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVTVG-LPAGTTITALAAS-TY 204
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + + L G GQLG GT + +T P ++ AG TI +
Sbjct: 205 SLALTDTGAALAWGSNSRGQLGDGTTTDRST--------------PVTVSLPAGTTITAL 250
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A +H++A+ G V WG G+LG + P V + + ++AG
Sbjct: 251 AASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTI----TALAAGR 306
Query: 295 VNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
++ G + WG N GD D P + +G + + +G H D
Sbjct: 307 SHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366
Query: 349 S-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + ++WG YG+LG G +S+ P V + G + + H + +V
Sbjct: 367 TGAVLAWGGNSYGQLGDGTTTDRST--PVTVGLPAGTTITVLVSMDNHGMALV 417
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 138/328 (42%), Gaps = 31/328 (9%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG G R P V + I AG SH++ +T+ G LA+G N GQ
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG G+ + P V + +TA A G ++ L+ + ++L G GQLG GT
Sbjct: 122 LGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALT--DTGAVLAWGSNSNGQLGDGTT 179
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+T P + AG TI +A T +++A+ G WG G+
Sbjct: 180 TARST--------------PVTVGLPAGTTITALAAST-YSLALTDTGAALAWGSNSRGQ 224
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD- 317
LG D P V + + ++A +S G + WG N GD
Sbjct: 225 LGDGTTTDRSTPVTVSLPAGTTI----TALAASYDHSLALTDTGAVLAWGSNSNGQLGDG 280
Query: 318 ---DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSA 373
+ P + +G + + +G H V + + ++WG G+LG G +S+
Sbjct: 281 TTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRST- 339
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVD 401
P V + G + ++A GY HSL + D
Sbjct: 340 -PVTVGLPAGTTITALAAGYYHSLALTD 366
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 49/381 (12%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
+A G+ GA + P R+ + GV VA H +AV +G + WG N GQL
Sbjct: 225 NASGQLGGAPEAAYPVPWRVEDVSGV----VAVAAGQYHSLAVRYDGTVWAWGDNLYGQL 280
Query: 91 GHGDKIQ---RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G K++ R P V L + AG H++VV DG A+G N +GQLG GS
Sbjct: 281 GDG-KLEGNSRWLPKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSR 337
Query: 148 RNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ SPV+ L VS A A G ++ ++S ++ G GQ G GT Y
Sbjct: 338 AHA--ASPVQVLGVSGAVAVAAGYRHSLVVNS--DGTLWAWGSNLDGQRGDGTLTRY--- 390
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
P P + L+G +V VA G H +A+ S G V+ WG G+LG +
Sbjct: 391 -----------PTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTR 437
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-M 320
WVPR+V L ++AGS S G ++ W G+L + D
Sbjct: 438 HSRWVPRQVP------ELSGVVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASS 491
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM-PKKV 378
P + +LS + + +G+MH V AD + WG YG+LG G G + P +V
Sbjct: 492 VPLHVRELS--EVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQV 549
Query: 379 DILEGMHVISVACGYGHSLVI 399
L GM +SVA +GHSL +
Sbjct: 550 PGLSGM--VSVAADFGHSLAV 568
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 155/342 (45%), Gaps = 46/342 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV +G +T G N GQLG G + R P V LS + AG H++ + D
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG--VAAVAAGHGHSLALRYD 116
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N +GQLG + N P V L S V + G + L+ S+ G
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPVQVTGL-SGVVSVVAGDTHS--LAVRSDGSVWAWG 173
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG GT ++ + P + L+G +V VA G NH++AV S G
Sbjct: 174 RNTSGQLGDGTRDD--------------RAVPVQVTGLSG--VVSVAAGGNHSLAVRSDG 217
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG G+LG + VP RV+ + V+ ++AG +S G ++
Sbjct: 218 SVWAWGNNASGQLGGAPEAAYPVPWRVE--DVSGVV----AVAAGQYHSLAVRYDGTVWA 271
Query: 309 W----------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHA 357
W GKL+ N W+ PK + L G + + +G H V +D + +WG+
Sbjct: 272 WGDNLYGQLGDGKLEGN-SRWL-PKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNN 327
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G +S V +L ++VA GY HSLV+
Sbjct: 328 AYGQLGGGSRAHAAS----PVQVLGVSGAVAVAAGYRHSLVV 365
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 160/389 (41%), Gaps = 80/389 (20%)
Query: 41 DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
DG L +P R+ L GV VAAG H +A+ +G + WG N GQLG G +
Sbjct: 384 DGTLTRYPTPGRVPGLSGV--VSVAAG--GGHVLALLSDGTVWAWGDNASGQLGDGTRHS 439
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V ELS + AG S ++ V DG+ ++G N +GQLG GS P VR
Sbjct: 440 RWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVR 497
Query: 158 CLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
L SEV A A G AD TVW G YGQLG G + + S
Sbjct: 498 EL-SEVVAVAAGSMHALAVRADGTVW----------GWGFNDYGQLGDGFEGISARRYSP 546
Query: 210 VK-----------------LAYEAQ-----------------PRPRAIAAL---AGETIV 232
V+ LA A R + L A T+
Sbjct: 547 VQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAPGTVA 606
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ G N+++A+ + G ++ WG G+LG VP RV R + L +A
Sbjct: 607 LLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRASTL------AA 660
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMD-SGNMHHFV 345
G +S G L+ WG GD + P + +SG + +D + N+ V
Sbjct: 661 GQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSG--VVAVDVTLNLSLAV 718
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAM 374
+D S +WG+ G+LG P ++A+
Sbjct: 719 RSDGSLWAWGNNDVGQLGTQPSTYVTTAV 747
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 154/333 (46%), Gaps = 34/333 (10%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ V IK+ G HT+ +T G A G N
Sbjct: 8 YCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSN 67
Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
H QLG + R + P + +V ++ ACG+ ++ LS E +L+ G GQL
Sbjct: 68 DHSQLGHDLPTKRPLLIPELLDYVVVQI---ACGSRHSMALS--EWGQVLSWGDNDCGQL 122
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G TD + V+L P+ + L +T+V++ACG NH++A+ S G +Y+WG
Sbjct: 123 GQATDQDI------VQL-------PKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
YG+LG K+ V + +L P A I+ G +S + ++ WG+
Sbjct: 170 NIYGQLGVNTPKE--VTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNC 227
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
N+ YP L L +R + G+ F+ + + G YG+LG+G +
Sbjct: 228 GQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG-F 286
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G + +P+ V L G + VACG H+L +V
Sbjct: 287 G-ANEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 30/251 (11%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G+ A D ++V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 120 GQLGQATDQDIVQLPKIVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 93 G---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
+ ++P ++ L + G +H+ ++++ +S FGW N GQLG
Sbjct: 178 NTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISK--SSAVFGWGRNNCGQLGLNDE 235
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNT 205
+ P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG NE
Sbjct: 236 TSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFGANEM-- 291
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHR 264
PR + L G TI +VACG HT+A V S+G VY +G G G+LG R
Sbjct: 292 -------------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTR 338
Query: 265 EQKDEWVPRRV 275
K +P+ V
Sbjct: 339 STKSLTLPQVV 349
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 33/351 (9%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G D +++P+++ I+ VA G H + + GR Y G N+ QLGH +
Sbjct: 22 GIEDEQILTPSQVPWTPDSAIKQVACG--HRHTLFLTSSGRVYACGSNDHSQLGH--DLP 77
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
RP ++ EL Y + + G H++ ++E G L++G N GQLG + ++ ++ P V
Sbjct: 78 TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIV 137
Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
R LVS+ V ACG + ++ L+S + + G YGQLG T E + V+L
Sbjct: 138 RQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLGVNTPKEVTHSNQPVRL--- 192
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
L G + +ACG NH+ + V+ WG G+LG ++ P ++
Sbjct: 193 --------TTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQL 244
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKN-NGDDWMYPKPLMDLS 329
+ V ++ G S G ++ +G+L + G + M P+ +M+L
Sbjct: 245 KTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELM 300
Query: 330 GWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKV 378
G + + GN H S +G G+L G KS +P+ V
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQL--GTRSTKSLTLPQVV 349
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 159/348 (45%), Gaps = 38/348 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWG G LGHG+ Q P +V L I+K G +HT+ +++DG ++G
Sbjct: 210 YTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYG 269
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT--VWLSSVEGASILNAGLPQYGQLG 196
G+LG G +R+ P + L S +T AC + V S +GA + + G YGQLG
Sbjct: 270 GRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGA-LFSFGENDYGQLG 328
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
D + + +++L+ I +VACG+ H+ A+ G ++ WG
Sbjct: 329 IPEDKLLTS-------------YIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCN 375
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWG---- 310
G+LG+ +P + + N L +AV ++ G +S+ G+++ G
Sbjct: 376 ESGQLGNGNYTSTSLP---SLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTY 432
Query: 311 -----KLKNNGDDWM-YPKPLMDLSGWNLRCMD--SGNMHHFVGAD-SSCISWGHAQYGE 361
L +N DD + Y + + RC+ G+ H V D +WG + G
Sbjct: 433 GQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGR 492
Query: 362 LGYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVIVDRTNVGER 408
LG+G + +P +++I +EG HV V+CG H+ V R V ++
Sbjct: 493 LGHGDNLNRH--LPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQ 538
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 18 KGGELLFCGSTCWDAVG-RRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
K G + CG + +G D ++ +R V D R V C H V
Sbjct: 420 KKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDG 479
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHT 122
G +TWGR + G+LGHGD + R PT I + ++ GR+HT
Sbjct: 480 GEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHT 526
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 55/362 (15%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDV 75
E G + CG + +G +D N SP P+ G++ + ++AG + +A+
Sbjct: 191 ESDGTVWACGENDYGQLGNNN-TIDIN--SPI---PVEGLNKVSSISAG--KYYSMALKS 242
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+G +TWG N+ GQLG G R P V LS I +G SH++ + +DG A+G
Sbjct: 243 DGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLALKDDGTVWAWG 300
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N+ GQLG G+ ++ PS V+ L S + + +CG +++ L + ++ G GQL
Sbjct: 301 DNESGQLGDGTTNSKYIPSQVQGL-SGIVSISCGFYYSMALKN--DGTVWVWGDNTSGQL 357
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GT + NT A P ++ L G ++ +ACG NH++A+ + G V+TWGF
Sbjct: 358 GDGTTTDRNT----------AVP----VSGLDG--VIAIACGVNHSMALRNDGTVWTWGF 401
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-----ISAGSVNSSCTAGGGQLYMWG 310
+G+LG + +N +P + I+ G+ +S G ++ WG
Sbjct: 402 NAFGQLGDGTK-----------VSKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWG 450
Query: 311 KLK----NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
+ NG P + +LSG ++ + G F + D + +WG+ +YGELG
Sbjct: 451 DNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELG 508
Query: 364 YG 365
G
Sbjct: 509 KG 510
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 35/352 (9%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
DG VS P+ G+D +A C + H +A+ +G + WG N+ GQLG+G I
Sbjct: 409 DGTKVSKNTAVPISGLD-GIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTT 467
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P+ VS LS IK G S + + DG A+G N++G+LG G I P+ +
Sbjct: 468 PSQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLN-I 524
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
++ A + G+ + L + ++ G +YGQLG GT +++K P
Sbjct: 525 GDIKAISIGSSHCLALKN--DGTVWAWGDNRYGQLGDGT--------TTIK------SLP 568
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
++ ++G I ++ G +H++A+ S G V+ WG G+LG ++D P +V
Sbjct: 569 VQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQV----- 621
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPKPLMDLSGWNLRCMDS 338
+ L VIS S G +++WG N + P + LSG + ++
Sbjct: 622 -SELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSG--IIAIEC 678
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
G H+ + D + +WG +G+ G G ++ +P +V L G+ I+V
Sbjct: 679 GTYHNLALKNDGTVWAWGKNNFGQFGDGT--TTTTNIPVQVSGLSGVKAIAV 728
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 152/343 (44%), Gaps = 50/343 (14%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A++ +G + G N+ GQLG+ + I + P V L+ K+ AG+ +++ + D
Sbjct: 186 HTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYSMALKSD 243
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N +GQLG G+ + P V+ L S + A + G ++ L + ++ G
Sbjct: 244 GTVWTWGENDYGQLGDGTTATRLSPVQVQNL-SGIIAISSGNSHSLALK--DDGTVWAWG 300
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ GQLG GT N ++ P + L+G IV ++CG +++A+ + G
Sbjct: 301 DNESGQLGDGTTN--------------SKYIPSQVQGLSG--IVSISCGFYYSMALKNDG 344
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-----ISAGSVNSSCTAGG 303
V+ WG G+LG D RN +P + I+ G +S
Sbjct: 345 TVWVWGDNTSGQLGDGTTTD-----------RNTAVPVSGLDGVIAIACGVNHSMALRND 393
Query: 304 GQLYMWG--KLKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ WG GD K P+ L G + + G H D + +WG
Sbjct: 394 GTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDG--IIAITCGTSHSMALKDDGTVWAWGD 451
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
QYG+LG G + S+ P +V L G+ S+ CGY S +
Sbjct: 452 NQYGQLGNGTF--ISNTTPSQVSNLSGIK--SIFCGYSTSFAL 490
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 152/350 (43%), Gaps = 47/350 (13%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
DI+ ++ G S HC+A+ +G + WG N GQLG G + P VS +S I
Sbjct: 526 DIKAISIG--SSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGIS--GITAIS 581
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG SH++ + DG A+G N GQLG G+ E +PV+ VSE++ +
Sbjct: 582 AGGSHSLALKSDGTVWAWGQNNVGQLGDGT--KEDRNTPVQ--VSELSG----------I 627
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + + L G + + YN L E P I+ L+G I+ + C
Sbjct: 628 TVISNCIYRSFALKNDGTVWVWGSDSYN-------LPLEKMTMPIQISGLSG--IIAIEC 678
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
GT H +A+ + G V+ WG +G+ G +P +V + L I+ G
Sbjct: 679 GTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQV------SGLSGVKAIAVGGNR 732
Query: 297 SSCTAGGGQLYMWGKL-----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
S G ++ WG++ + + W + + LS + S + + + D
Sbjct: 733 SIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSE-----IVSISNNVALKNDGKV 787
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG YG+LG G + + P V LEG V VA S+V+++
Sbjct: 788 FTWGANDYGQLGDGTTTARVTVAP--VSGLEG--VAGVASSDTTSMVLMN 833
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 38/297 (12%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
I K G SHT+ + DG A G N +GQLG+ + + P PV L ++V++ + G
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL-NKVSSISAGKY 235
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+++ L S ++ G YGQLG GT ++ +L+ P + L+G I
Sbjct: 236 YSMALKS--DGTVWTWGENDYGQLGDGT--------TATRLS------PVQVQNLSG--I 277
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ ++ G +H++A+ G V+ WG G+LG +++P +V L IS
Sbjct: 278 IAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQ------GLSGIVSIS 331
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
G S G +++WG + GD D P+ L G + + G H
Sbjct: 332 CGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGVNHSMA 389
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ D + +WG +G+LG G K++A+P + L+G +I++ CG HS+ + D
Sbjct: 390 LRNDGTVWTWGFNAFGQLGDGTKVSKNTAVP--ISGLDG--IIAITCGTSHSMALKD 442
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ P ++ L G+ +A C + H +A+ +G + WG+N GQ G G + P
Sbjct: 661 MTMPIQISGLSGI----IAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQ 716
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
VS LS K G RS + + DG + W G I + PS V E
Sbjct: 717 VSGLSGVKAIAVGGNRS--IALKSDGT--VWQW--------GRILVSVSPSTV-----ET 759
Query: 164 TATACGADFTVWLSSVEG-------ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
TA D + S+ + G YGQLG GT A
Sbjct: 760 WTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTT--------------TA 805
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+ ++ L G + VA ++ + + G + WG +G+LG+ E+
Sbjct: 806 RVTVAPVSGLEG--VAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGER 853
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 39/338 (11%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + +++ G HT+ +T G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
+ QLG SP L+ E + CG+ ++ LS + +L+ G
Sbjct: 68 DYSQLGHDLPTKRPRMSPF-LLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 124
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGH TD E V+L P+ + L +T+V++ACG NH++A+ S G +Y+
Sbjct: 125 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 171
Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
WG YG+LG D P R+ + P A I+ G +S + G ++ W
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 227
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
G+ N+ + YP L L +R + G+ F+ + + G YG+L
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 287
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+ V L G + VACG H+L +V
Sbjct: 288 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 323
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D +V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 182
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
D + P ++ L + G +H+ ++++ G +G N GQLG N
Sbjct: 183 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG +
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN------ 294
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQK 267
+ PR + L G TI +VACG HT+A V S+G VY +G G G+LG R K
Sbjct: 295 --------EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 346
Query: 268 DEWVPRRV 275
+P+ V
Sbjct: 347 SLMLPQVV 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 36/373 (9%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+ L+C GST +G G D +++P+++ ++ VA G H + + G+
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATGK 60
Query: 79 CYTWGRNERGQLGHGDKIQRDRPT---IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
Y G N+ QLGH +R R + ++ EL Y I + G H++ +++ G L++G
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120
Query: 136 WNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
N GQLG + + ++ P VR LV++ V ACG + ++ L+S + + G YG
Sbjct: 121 DNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIYG 178
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLG + N+ + P + L G + +ACG NH+ + G V+ W
Sbjct: 179 QLGVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 227
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----- 308
G G+LG ++ + P ++ + V ++ G S G ++
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGA 283
Query: 309 WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYG 365
+G+L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 284 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--G 341
Query: 366 PYGQKSSAMPKKV 378
KS +P+ V
Sbjct: 342 TRSTKSLMLPQVV 354
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I ++ G H V +G Y WG N QLG+G Q P +
Sbjct: 69 IVPKKLEALCGKKISSLSYG-SGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQV 127
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P+P R CL
Sbjct: 128 CTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 185
Query: 161 SEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ ACG T ++ V + G GQLG G + Q
Sbjct: 186 GKIVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--------------QLT 229
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +AAL ++++ACG HT+A+ +G +Y WG YG+LG + ++ P ++ + +
Sbjct: 230 PCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQI-MME 288
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
+ V+ A SA + S+ GQ+YMWG+ + G +P
Sbjct: 289 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR--GQSVTFP 327
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + +T FG N LG+G ++ I P +
Sbjct: 17 TLLSPQEIASIRKACVFGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 76
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++++ + G+ V L + +G + G Y QLG+GT N+ T
Sbjct: 77 LCGKKISSLSYGSGPHVVLCTEDG-EVYAWGHNGYSQLGNGTTNQGITP----------- 124
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ G +Y WG+ G++G ++ PRRV
Sbjct: 125 --VQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 181 ---SNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 237 HSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMMEKERVV 293
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 294 EIAACHSAHT 303
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 108 bits (271), Expect = 6e-21, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 42/349 (12%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
T+L P + R + + H + G+ +TWG + G+LGHGD+ P V L
Sbjct: 123 TKLYP----EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVAL 178
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV---SE 162
+ +K G T+ ++ S + W N+ GQLG G ++ P V
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKR 238
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPR 221
+ A GA + S ++ G +G+LGHG T+N Y +P
Sbjct: 239 LVALDAGASRAAVIDS--SGALFTWGRGDHGRLGHGDTENRY---------------QPT 281
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQR 280
+++L G +V VA G H++A+ G +++WG G G+LGH Q + P+++ F
Sbjct: 282 LVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVD 341
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWM--YPKPLMDLSGWN 332
+P ISAG +S G +Y WG + DD P+ ++ G
Sbjct: 342 ---MPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIR 398
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ + G H + +D++ SWG G L G + +K+ P +I
Sbjct: 399 FKTISCGFQHTVALTSDNTIYSWGCGLGGRL--GTFNEKNQCAPIACNI 445
Score = 108 bits (269), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R VA + +D G +TWGR + G+LGHGD R +PT+VS L + + G
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALG 297
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS--EVTATACGADFTVW 175
H++ +T+ G ++G ++GQLG GS ++ ++ P ++ V ++ + G +V
Sbjct: 298 GGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV- 356
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ ++ S+ G+ YG LG G ++ D ++ + P+ I G ++
Sbjct: 357 -AQLDDGSVYAWGMSDYGILGTG-----DSDDGAINI-------PQRILMPRGIRFKTIS 403
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG HTVA+ S +Y+WG G GRLG +K++ P ++ N P V SAG +
Sbjct: 404 CGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNI---PNYQP--VVFSAGEI 458
Query: 296 NS 297
++
Sbjct: 459 ST 460
Score = 102 bits (255), Expect = 4e-19, Method: Composition-based stats.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
+I AG +H ++++ G +G ++G+LG G + P V L + + CG
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCG 189
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T+ LS G+ + G ++GQLG G + D L P ++A +
Sbjct: 190 GRSTIALSHTAGSGLYTWGNNEFGQLGRG-----DCGDDFTCL-------PESVAVPGAK 237
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V + G + +DS G ++TWG G +GRLGH + ++ + P V + V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVV----A 293
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ G +S G+L+ WG+ +N + PK L S +
Sbjct: 294 VALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGY 353
Query: 343 HFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H V D S +WG + YG LG G + +P+++ + G+ +++CG+ H++ +
Sbjct: 354 HSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT 413
Query: 401 DRTNV 405
+
Sbjct: 414 SDNTI 418
Score = 88.2 bits (217), Expect = 9e-15, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 29/285 (10%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + ++ +P ++ L + +++V G S ++ YTWG NE GQLG G
Sbjct: 159 GRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRG 218
Query: 94 DKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
D D P V+ ++ AG S V+ G +G HG+LG G N
Sbjct: 219 D-CGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENR 277
Query: 151 IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+P+ V L V A A G ++ L+ + + + G + GQLGHG+ Y ++ +
Sbjct: 278 YQPTLVSSLYGHVVVAVALGGGHSLALT--KAGELFSWGRGENGQLGHGS---YQSQQLA 332
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
K P+ I+ ++ G H+VA G VY WG YG LG + D
Sbjct: 333 PKQLQFFVDMPK---------IIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDG 383
Query: 270 WVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
+++ QR +L P + IS G ++ +Y WG
Sbjct: 384 ----AINIPQR--ILMPRGIRFKTISCGFQHTVALTSDNTIYSWG 422
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E I+ V G H + G ++TWG G YGRLGH +++ P++V +P +
Sbjct: 129 ERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALAN---IPMKY 185
Query: 289 VISAG--SVNSSCTAGGGQLYMWGKLK-------NNGDDWM-YPKPLMDLSGWNLRCMDS 338
V G ++ S TAG G LY WG + + GDD+ P+ + L +D+
Sbjct: 186 VFCGGRSTIALSHTAGSG-LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDA 244
Query: 339 G-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G + + + + +WG +G LG+G ++ P V L G V++VA G GHSL
Sbjct: 245 GASRAAVIDSSGALFTWGRGDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVALGGGHSL 302
Query: 398 VIVDRTNVGE 407
+ T GE
Sbjct: 303 AL---TKAGE 309
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 157/356 (44%), Gaps = 60/356 (16%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA---------------GAGRSHTVVVT 126
WG E G+LGHGD + + P + ++ + + G HTV VT
Sbjct: 29 WG--EFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT 86
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASIL 185
EDG +++GW GQLGSG+ ++ P+ V+ L + V ACG T ++ V ++
Sbjct: 87 EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDV--GLVM 144
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLG G + + PR ++ L E I ++ACG HT+A+
Sbjct: 145 CWGKGNSGQLGQGD--------------WTSSLLPRTVSTLYNEKIRQIACGMAHTLALS 190
Query: 246 SKGYVYTWGFGGYGRLG---HREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
G +Y+WG G G+LG H+E+ D P++V V + I+ GS +
Sbjct: 191 VNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKF----EFIACGSRHCMAIT 246
Query: 302 GGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLR-CMDSGNMHH--FVGADSSCIS 353
+L+ W G+L + + ++ S NLR C + HH + + +
Sbjct: 247 DDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFT 306
Query: 354 WGHAQYGELGYGPYG-----QKSSAMPKKVDILEGMH-----VISVACGYGHSLVI 399
G YG+LG+G +K+ A+ +L + +I ACG H+LVI
Sbjct: 307 CGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVI 362
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 171/405 (42%), Gaps = 55/405 (13%)
Query: 30 WDAVGRRKGALDGNLVSPTRLR--PLVGVDIRFVA--------AGCVSC---HCVAVDVE 76
W GR + + P RLR V + F A A V+C H VAV +
Sbjct: 29 WGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTED 88
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G +WG GQLG G+ + P +V LS +++ G HT VVT+ G + +G
Sbjct: 89 GEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGK 148
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQLG G + + P V L +E + ACG T+ L SV G I + G GQL
Sbjct: 149 GNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL-SVNG-EIYSWGAGADGQL 206
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G E T D + P+ + E +ACG+ H +A+ +++WG
Sbjct: 207 GVGKHQE-ETADVAT---------PQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGL 256
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
G GRLG + + + P V +R+ ++AG +++ + G+++ +G
Sbjct: 257 GADGRLGLGDSESRFSP---TVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYG 313
Query: 311 KLKNNGDD----------------WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
+L + D ++ L D C D+ + + +W
Sbjct: 314 QLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTL--VISTAGEVFAW 371
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G A+ G+LG G G + + P ++ L G+ V V+CG HS +
Sbjct: 372 GAAEDGQLGTG--GTEGANSPVELTSLRGL-VGDVSCGLVHSAAV 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 112/294 (38%), Gaps = 48/294 (16%)
Query: 135 GWNKHGQLGSGSIRNEIEPSPVR------------CLVSE----VTATACGADFTVWLSS 178
GW + G+LG G +++EP +R L E ACG TV ++
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT- 86
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E +++ G GQLG G N D +V P + AL+ + VACG
Sbjct: 87 -EDGEVVSWGWGNEGQLGSG-----NAFDQTV---------PAVVKALSNHRVCGVACGY 131
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
HT V G V WG G G+LG + +PR V + I+ G ++
Sbjct: 132 YHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQ----IACGMAHTL 187
Query: 299 CTAGGGQLYMW----------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
+ G++Y W GK + D P+ + + G+ H +
Sbjct: 188 ALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITD 247
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
D SWG G LG G + S + I E + + VA G H+ V+ D
Sbjct: 248 DCRLFSWGLGADGRLGLGDSESRFSPTVVRRSI-ENLRICYVAAGGHHTAVLSD 300
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 40/332 (12%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P R++ L R VA H +A+ +G +TWG N GQL HG P V
Sbjct: 341 TPKRVQGLS----RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVR 396
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
ELS AGA H++ V DG+ A+G+N+ GQLG GS+ + EP V+ L S V A
Sbjct: 397 ELSGVVAVAAGA--LHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGL-SGVAA 453
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+ G + + L+ + G +GQLG GT T ++ V + R R ++
Sbjct: 454 VSAGLNHS--LARGTDGGVWAWGGNSFGQLGEGT-----TSNALVPV------RVRGLSG 500
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ ETI + G NH++A S G ++ WG G+LG + VP RV L
Sbjct: 501 V--ETI---SAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRV------QGLS 549
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY-PKPLMDLSGWNLRCMDSG 339
A + AG +S G ++ WG +L + + P + LSG + + +G
Sbjct: 550 GVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQGLSG--METVAAG 607
Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
++H VG+D S SWG+ +G+LG+G G+
Sbjct: 608 SLHSLSVGSDGSMWSWGNNHHGQLGHGLPGRS 639
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 173/360 (48%), Gaps = 46/360 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVS 105
P RL L ++ VAAG H +AV +G + WG N GQLG G+ + R P V
Sbjct: 140 PWRLEDLS--EVVAVAAG--GNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQ 195
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVT 164
LS + A AG +H++V DG+ A+G N GQLG+G S+ P V+ L V
Sbjct: 196 GLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGL-RGVM 252
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G +++ L S ++ G +GQ G G S+V L+ + R
Sbjct: 253 AVAAGGLYSLALRS--DGTLWAWGSNDHGQRGDG---------STVYLSSSVRVR----- 296
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L+G +V +A G+ H++AV S G ++ WG YG+LG +KD P+RV R
Sbjct: 297 WLSG--VVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR---- 350
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
++AG +S G ++ WG + +D P + +LSG + + +
Sbjct: 351 --VVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG--VVAVAA 406
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G +H V +D S +WG+ + G+LG G SSA P +V L G V +V+ G HSL
Sbjct: 407 GALHSLAVLSDGSVWAWGYNRQGQLGDGSL--SSSAEPVRVQGLSG--VAAVSAGLNHSL 462
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 36 RKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
R+G L DG+L S P R++ L GV V+AG H +A +G + WG N GQLG
Sbjct: 427 RQGQLGDGSLSSSAEPVRVQGLSGV--AAVSAGL--NHSLARGTDGGVWAWGGNSFGQLG 482
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
G P V LS ++ AG +H++ DG A+G N GQLG G+ N
Sbjct: 483 EGTTSNALVPVRVRGLSG--VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSS 540
Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V+ L S V A G + + L+ S+ G+ +GQLG GT N
Sbjct: 541 VPVRVQGL-SGVAAVFAGLNHS--LAVRTDGSVWAWGINSFGQLGEGTTNT--------- 588
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P + L+G + VA G+ H+++V S G +++WG +G+LGH
Sbjct: 589 -----SFAPVRVQGLSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGH 633
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 158/369 (42%), Gaps = 59/369 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+R L GV VA H +A+ +G + WG N GQLG G P V
Sbjct: 39 PVRVRGLSGV----VAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPG 94
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTA 165
LS + AG +H++ + DG+ A+G N QLG G+ + P R +SEV A
Sbjct: 95 LS--GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLSEVVA 151
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G + + L+ ++ G GQLG G N T+ P+ +
Sbjct: 152 VAAGGNHS--LAVRADGTVWAWGDNFAGQLGDG--NILTTR-----------WLPKQVQG 196
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L+G +V + G H++ S G V+ WG G+LG+ + LP
Sbjct: 197 LSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGN------------GISVGYGALP 242
Query: 286 PEA-------VISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMD---LSGW 331
+ ++AG + S G L+ WG + +G +Y + LSG
Sbjct: 243 EQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGST-VYLSSSVRVRWLSG- 300
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ M +G+ H V +D + +WG YG+LG G +K PK+V L V++VA
Sbjct: 301 -VVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGT--RKDHDTPKRVQGLS--RVVAVA 355
Query: 391 CGYGHSLVI 399
G GHS+ +
Sbjct: 356 AGDGHSIAL 364
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 41/340 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G + WG N GQLG G P V LS + AG H++ + D
Sbjct: 7 HSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS--GVVAVSAGEGHSLALHRD 64
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N GQLG G+ + EP V L S V A + G + ++ L S S+ G
Sbjct: 65 GTVWAWGDNALGQLGDGTSDSHSEPVRVPGL-SGVVAVSAGDNHSLALRS--DGSVWAWG 121
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
QLG + +Y R ++ +V VA G NH++AV + G
Sbjct: 122 DNNSDQLGGAPGAQ----------SYSVPWRLEDLS-----EVVAVAAGGNHSLAVRADG 166
Query: 249 YVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V+ WG G+LG W+P++V L SAG +S G ++
Sbjct: 167 TVWAWGDNFAGQLGDGNILTTRWLPKQV------QGLSGVVAASAGWAHSMVALSDGSVW 220
Query: 308 MWGKLKN----NGDDWMY---PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG + NG Y P+ + L G + + +G ++ + +D + +WG +
Sbjct: 221 AWGNNTSGQLGNGISVGYGALPEQVQGLRG--VMAVAAGGLYSLALRSDGTLWAWGSNDH 278
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+ G G SS++ +V L G V+++A G HSL +
Sbjct: 279 GQRGDGSTVYLSSSV--RVRWLSG--VVAMAAGSAHSLAV 314
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 47/296 (15%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG H++ + DG A+G N GQLG GS + EP VR L S V A + G + L
Sbjct: 3 AGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGL-SGVVAVSAGEGHS--L 59
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ ++ G GQLG GT + ++ P + L+G +V V+
Sbjct: 60 ALHRDGTVWAWGDNALGQLGDGTSDSHS--------------EPVRVPGLSG--VVAVSA 103
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSV 295
G NH++A+ S G V+ WG +LG + VP R++ L ++AG
Sbjct: 104 GDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLE------DLSEVVAVAAGGN 157
Query: 296 NSSCTAGGGQLYMWGK--LKNNGDD------WMYPKPLMDLSGWNLRCMDSGNMHHFVG- 346
+S G ++ WG GD W+ PK + LSG + +G H V
Sbjct: 158 HSLAVRADGTVWAWGDNFAGQLGDGNILTTRWL-PKQVQGLSG--VVAASAGWAHSMVAL 214
Query: 347 ADSSCISWGHAQYGELGYGP---YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D S +WG+ G+LG G YG A+P++V L G V++VA G +SL +
Sbjct: 215 SDGSVWAWGNNTSGQLGNGISVGYG----ALPEQVQGLRG--VMAVAAGGLYSLAL 264
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L GV F AG H +AV +G + WG N GQLG G P V
Sbjct: 542 PVRVQGLSGVAAVF--AGL--NHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQG 597
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
LS ++ AG H++ V DG+ ++G N HGQLG G P+PVR L+
Sbjct: 598 LSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR--SPTPVRSLL 647
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+A GT+H++A+ G V+ WG G+LG P RV L +SAG
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRV------RGLSGVVAVSAG 54
Query: 294 SVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-V 345
+S G ++ W G+L + D + +P+ LSG + + +G+ H +
Sbjct: 55 EGHSLALHRDGTVWAWGDNALGQLGDGTSD-SHSEPVRVPGLSG--VVAVSAGDNHSLAL 111
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D S +WG +LG P G +S ++P +++ L V++VA G HSL +
Sbjct: 112 RSDGSVWAWGDNNSDQLGGAP-GAQSYSVPWRLEDLS--EVVAVAAGGNHSLAV 162
>gi|392578984|gb|EIW72111.1| hypothetical protein TREMEDRAFT_72659 [Tremella mesenterica DSM
1558]
Length = 549
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 181/406 (44%), Gaps = 31/406 (7%)
Query: 20 GELLFCGSTCWD---AVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
G +L CGST W+ R K A +L+ P LR + V + +G + +C+ +DV
Sbjct: 20 GRVLICGSTTWNHNWKKDRGKDAAKSDLLEPHILRSICNVRAAEIISGSTANYCIVLDVF 79
Query: 77 GRCYTWGRNERGQLGHGDKIQRDR------PTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
G Y +G+ L + + ++ PT V + A RSH ++ G
Sbjct: 80 GAAYLFGKLPVASLAPPNGLVSEQEPLKVSPTNVGLPRGSRWIAGSAARSHMFLIDSWGQ 139
Query: 131 SLAFGWNKHGQLG---SGSI-RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G N GQ+G G + + + P P + G F+++LS + +
Sbjct: 140 VWGCGNNTMGQVGLPVCGEVSKFTLVPGPWSEAGDRIVQITAGNTFSLFLS--DKGQVYA 197
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
AG + GQLG+G E + K +++ +P ALAG I ++A G+ H++A+D
Sbjct: 198 AGSSEAGQLGNGRTGERVLRAG--KTSFDIEPPHLVEGALAGREIQRIASGSQHSLAMDK 255
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
+GY Y WG+GGY RLG QK+ P + F + AV+ G +S +
Sbjct: 256 EGYAYGWGYGGYSRLGLGSQKNVLTPTVLPAFAGKPLTRAMAVL-CGPASSMVITHQRVV 314
Query: 307 YMWGKLKNNGD-----DWMYPKPLMDLSGW-NLRCMDSGNMHHFVGADSS------CISW 354
Y+ GK K GD + KP+ L N+ G +F+ A + I W
Sbjct: 315 YIAGKWKMTGDGSGGQPYTIFKPIEHLPQMSNIMSASCGGCTYFLTATAPETDKMMTIGW 374
Query: 355 GH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YGELG GP KS ++P ++ L+ + + VA G H+L +
Sbjct: 375 GQGVVYGELGMGPDRGKSQSIPTPIEPLDSIAIFDVAAGPFHTLFL 420
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 35/331 (10%)
Query: 80 YTWGRNERGQLGH-GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
YTWGR + +LG G + +P ++ I++ G HT+V+ EDG +FG+N+
Sbjct: 13 YTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQ 72
Query: 139 HGQLGSGS-IRNEIEPS-PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG+G+ + + ++ S + L +++ A ACG + L V G ++ G + G+LG
Sbjct: 73 YGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAAL-DVNG-TVFTWGGGKNGRLG 130
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
H N+ T+ ++ + PRA K+ CG + T A+ G +YTWG+G
Sbjct: 131 H---NDEQTRTIPCRITH----LPRA---------HKIFCGYHITAAITDDG-LYTWGWG 173
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----- 311
+G+LG +D + P++V +F N+ + ++ G + G +Y WG
Sbjct: 174 EHGQLGQGSLEDSYGPKKV-IFDDANLAISQ--LACGDRHCLVRTESGDVYTWGSNEFGQ 230
Query: 312 --LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
+ + + P L L+G + + +G+ H ++ S +WG G+ G+G Y
Sbjct: 231 LGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDY- 289
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
MP V+ L G+ ++ V CG+ ++ +
Sbjct: 290 -NDCDMPFLVESLVGVFILKVFCGHNFTVAL 319
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
R + + + +A C H A+DV G +TWG + G+LGH D+ R P ++ L
Sbjct: 90 RDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLP-- 147
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTAT 166
+ K G T +T+DG +GW +HGQLG GS+ + P V + + ++
Sbjct: 148 RAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKV--IFDDANLAISQL 204
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG L E + G ++GQLG G NE + P + +L
Sbjct: 205 ACGDRHC--LVRTESGDVYTWGSNEFGQLGIGRYNEIYSS-------------PVLLTSL 249
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
AG + VA G H+ AV + G ++TWG G G+ GH + D +P V+
Sbjct: 250 AGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVE 299
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 133 AFGWNKHGQLGSGSIRNE-IEPSPVR----CLVSEVTATACGADFTVWLSSVEGASILNA 187
+G K+ +LG R++ +P ++ C + +V ACG T+ L +E + +
Sbjct: 14 TWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQV---ACGGGHTLVL--LEDGCLHSF 68
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G QYGQLG+GT DS + + R I++L+ + ++ VACG H+ A+D
Sbjct: 69 GYNQYGQLGNGTK-----VDSPLDAS-------RDISSLSNK-LIAVACGRYHSAALDVN 115
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+TWG G GRLGH +++ +P R+ R + + ++ T G +
Sbjct: 116 GTVFTWGGGKNGRLGHNDEQTRTIPCRITHLPR-----AHKIFCGYHITAAITDDGLYTW 170
Query: 308 MWGKLKNNG-----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGE 361
WG+ G D + K + D + + + G+ H V +S +WG ++G+
Sbjct: 171 GWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQ 230
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG 406
LG G Y + S+ P + L GM V VA G HS + TN G
Sbjct: 231 LGIGRYNEIYSS-PVLLTSLAGMMVTFVAAGDRHSAAV---TNTG 271
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 54/378 (14%)
Query: 36 RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
R+G D + P ++ I+ VA G H + + +G +++G N+ GQLG+G K
Sbjct: 25 RRGTRDDS-CQPELIKVFENCAIQQVACG--GGHTLVLLEDGCLHSFGYNQYGQLGNGTK 81
Query: 96 IQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
+ D +S LS K+ GR H+ + +G +G K+G+LG N+ +
Sbjct: 82 VDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNGRLG----HNDEQT 136
Query: 154 SPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSS 209
+ C ++ + CG T +++ + G ++GQLG G+ ++ Y K
Sbjct: 137 RTIPCRITHLPRAHKIFCGYHIT---AAITDDGLYTWGWGEHGQLGQGSLEDSYGPK--- 190
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+ I A I ++ACG H + G VYTWG +G+LG
Sbjct: 191 -----------KVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG------- 232
Query: 270 WVPRRVDVFQRNNVLPPEA-----VISAGSVNSSCTAGGGQLYMWG----KLKNNGD--D 318
+ R +++ +L A ++AG +S+ G L+ WG +GD D
Sbjct: 233 -IGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND 291
Query: 319 WMYPKPLMDLSG-WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + L G + L+ N + D+ +G+ YG+LG G + S P+K
Sbjct: 292 CDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGS--KSSCCTPRK 349
Query: 378 VDILEGMHVISVACGYGH 395
+ I + CG+ H
Sbjct: 350 L-FFSIPGTIDITCGHFH 366
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L L G+ + FVAAG H AV G +TWG GQ GHGD D P +V
Sbjct: 242 SPVLLTSLAGMMVTFVAAG--DRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVE 299
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L I K G + TV +++D + FG N +GQLG GS + P + +
Sbjct: 300 SLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTID 359
Query: 166 TACG-ADFTVWLSSVE 180
CG T+W + E
Sbjct: 360 ITCGHFHCTLWTTLEE 375
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 24/246 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVD-VEG 77
G L GS + +G + N+V+ R + +++ V C S H +A++ +G
Sbjct: 131 GHLFSWGSNVYGQLGVERM----NVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG N+ GQLG G + PT V++L I + AG SH++V+T G +G N
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKN 246
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQ+G R+ + PS V+ L ++ V ACG DF+V +++ G AG YGQLG
Sbjct: 247 MFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAG--TYGQLG 304
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG N ++ P+ + L G ++ VACG HT+A+ ++ +Y +G
Sbjct: 305 HGNQN--------------SELFPKQVMELMGSVVLDVACGRCHTLAI-TENKLYAFGLN 349
Query: 257 GYGRLG 262
G+LG
Sbjct: 350 TSGQLG 355
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIK 113
V I ++ C HCVA+ +G ++WG N GQLG + + + R + E++ I
Sbjct: 110 VGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIV 169
Query: 114 KAGAGRSHTVVV-TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGAD 171
+ G +H++ + + DG A+G N HGQLG G+ + I P+ V L+ + A GA
Sbjct: 170 QIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGAS 229
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ L+ ++ G +GQ+G + + Y P + L + +
Sbjct: 230 HSLVLTP--SGTVFGWGKNMFGQIGQNEQRD---------ILY-----PSLVKLLRTQKV 273
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+++ACG + +VAV + G ++T+G G YG+LGH Q E P++V
Sbjct: 274 IRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQV 317
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 165/368 (44%), Gaps = 48/368 (13%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVD 74
K LL CG+T +G G + N+ S T LV F+ ++C H V +
Sbjct: 14 KSMSLLCCGNTSDGQLGL-GGIAEENVRSLT----LVESTKNFLKIRQIACGRHHSVMLL 68
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY----------KIKKAGAGRSHTVV 124
+G ++ G N+ QLGH D I+R +P + L Y + G +H V
Sbjct: 69 DDGSVFSCGNNDFYQLGH-DGIKR-KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVA 126
Query: 125 VTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
+T DG+ ++G N +GQLG + P ++ + ACG++ ++ L S +G
Sbjct: 127 LTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186
Query: 182 ASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+L+A GL +GQLG GT E+ P + L G I ++A G +H
Sbjct: 187 --VLHAWGLNDHGQLGIGTR--------------ESFIGPTTVNKLMGIPICQLAAGASH 230
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++ + G V+ WG +G++G EQ+D P V + + V+ + + + T
Sbjct: 231 SLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVI---RLACGEDFSVAVT 287
Query: 301 AGGGQLYM----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
A GG +G+L + N + ++PK +M+L G + + G H ++ ++G
Sbjct: 288 ATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITENKLYAFG 347
Query: 356 HAQYGELG 363
G+LG
Sbjct: 348 LNTSGQLG 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 52/345 (15%)
Query: 83 GRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
G GQLG G ++ R + S + KI++ GR H+V++ +DG+ + G N
Sbjct: 22 GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDF 81
Query: 140 GQLGSGSIRN------------EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
QLG I+ +++ S V V + ACG V L++ + +
Sbjct: 82 YQLGHDGIKRKPNLYENLHWYIDVKQSFVGI---HVISVACGDAHCVALTN--DGHLFSW 136
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YGQLG ++ A+ R I + IV++ACG+NH++A++S
Sbjct: 137 GSNVYGQLG------------VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALEST 184
Query: 248 -GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQ 305
G ++ WG +G+LG ++ P V N ++ P ++AG+ +S G
Sbjct: 185 DGVLHAWGLNDHGQLGIGTRESFIGPTTV-----NKLMGIPICQLAAGASHSLVLTPSGT 239
Query: 306 LYMWGKL------KNNGDDWMYP---KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
++ WGK +N D +YP K L L C + ++ V A ++G
Sbjct: 240 VFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVA--VTATGGLFTFGA 297
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
YG+LG+G Q S PK+V L G V+ VACG H+L I +
Sbjct: 298 GTYGQLGHG--NQNSELFPKQVMELMGSVVLDVACGRCHTLAITE 340
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 42/335 (12%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTI-VSELSKY--KIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG G+LG G I+ D+ + KY + + G +HTV++T+ G + G
Sbjct: 2 YCWGSTVHGELGLGG-IEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N QLG R +P V L +T +CG + T L+ E + G +GQL
Sbjct: 61 NDLDQLGHKKQRT--KPEKVEGLDFYRITKISCGGNHT--LAFNEWGQLFGWGSDSHGQL 116
Query: 196 G-HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G +GT QP P+ I +LA IV+++CG NH++A+ + G +Y+WG
Sbjct: 117 GFNGT----------------TQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWG 160
Query: 255 --FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
+ G LG R + ++ P + ++ + P A I+ GS +S + G +Y WGK
Sbjct: 161 GNYDGQLGLGMRSEYEKQ-PTLI----KSLLGIPIAFIACGSNHSFALSKSGAIYGWGKN 215
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYG 365
N+ ++ ++P L L ++ + G + F+ AD + G YG+LG+G
Sbjct: 216 TYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHG 275
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+K+ L G V V+CG H+L +V
Sbjct: 276 --STSNEILPRKIMELMGSTVTQVSCGKRHTLALV 308
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
P ++ L I V C H +A+ G Y+WG N GQLG G + + ++ PT++
Sbjct: 126 PKIIKSLATFHI--VQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIK 183
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L I G +H+ +++ G +G N +GQLG N++ P+ ++ L S V
Sbjct: 184 SLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVK 243
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG DF+ +LS+ G AG+ YGQLGHG T NE PR I
Sbjct: 244 YIACGEDFSAFLSADGGVFTCGAGM--YGQLGHGSTSNEI---------------LPRKI 286
Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTW 253
L G T+ +V+CG HT+A V S+G VY++
Sbjct: 287 MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 29/281 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + G ++ G N+ QLGH K QR +P V L Y+I K G +HT+ E
Sbjct: 45 HTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEW 102
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G +G + HGQLG + P ++ L + + +CG + ++ L++ + +
Sbjct: 103 GQLFGWGSDSHGQLGFNGTTQPL-PKIIKSLATFHIVQISCGKNHSLALTN--NGELYSW 159
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG G +EY + +P I +L G I +ACG+NH+ A+
Sbjct: 160 GGNYDGQLGLGMRSEY-------------EKQPTLIKSLLGIPIAFIACGSNHSFALSKS 206
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G +Y WG YG+LG +++++ P ++ + V I+ G S+ + G ++
Sbjct: 207 GAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRV----KYIACGEDFSAFLSADGGVF 262
Query: 308 -----MWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
M+G+L + + + + P+ +M+L G + + G H
Sbjct: 263 TCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRH 303
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 125/262 (47%), Gaps = 30/262 (11%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVDVE 76
K GE+ CG+ D +G +K T+ + G+D R C H +A +
Sbjct: 51 KSGEVFSCGNNDLDQLGHKKQR--------TKPEKVEGLDFYRITKISCGGNHTLAFNEW 102
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ + WG + GQLG Q P I+ L+ + I + G++H++ +T +G ++G
Sbjct: 103 GQLFGWGSDSHGQLGFNGTTQ-PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGG 161
Query: 137 NKHGQLGSGSIRNEIE--PSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N GQLG G +R+E E P+ ++ L+ + ACG++ + LS + +I G YG
Sbjct: 162 NYDGQLGLG-MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALS--KSGAIYGWGKNTYG 218
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLG + E + P + L + +ACG + + + + G V+T
Sbjct: 219 QLGLNDE--------------ENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264
Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
G G YG+LGH +E +PR++
Sbjct: 265 GAGMYGQLGHGSTSNEILPRKI 286
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 57/203 (28%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+ +V G NHTV + G V++ G +LGH++Q+ + P +V+ + I
Sbjct: 36 VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTK--PEKVEGLDFYRI----TKI 89
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
S G ++ GQL+ W G+DS
Sbjct: 90 SCGGNHTLAFNEWGQLFGW------------------------------------GSDS- 112
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
+G+LG+ Q +PK + L H++ ++CG HSL + TN GE
Sbjct: 113 --------HGQLGFNGTTQ---PLPKIIKSLATFHIVQISCGKNHSLAL---TNNGELYS 158
Query: 411 QLDVYDGKASSQDNEEIDRNSTV 433
YDG+ E ++ T+
Sbjct: 159 WGGNYDGQLGLGMRSEYEKQPTL 181
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 24/267 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L+ V + VA H +A+ EG+ Y+WG +RGQLGHG+ + PT++ E
Sbjct: 200 PRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDE 259
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L ++ K G H++ V DG ++G +G LG G+ ++ P + L + A
Sbjct: 260 LKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMA 319
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG +T+ +V G + + GL G+LG+G + + P I A
Sbjct: 320 VACGECYTI---AVAGDDVWSWGLGGNGELGYGVE-------------MPSYYMPTKIEA 363
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNV 283
L + I VACG + AV + G V+ WG G RLG +K PR + D+ +
Sbjct: 364 LFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIK 423
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ A +++ + GQ+Y+WG
Sbjct: 424 RVVASLFHALAIDEN-----GQVYIWG 445
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 118/272 (43%), Gaps = 30/272 (11%)
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+K L + +N +EP + L + + + ACG D ++++ S G I G G L
Sbjct: 132 SKRNLLLAADEKNPLEPDKSKLLENLDPSDIACGYD-SLFVVSRNGG-IFACGKGHMGCL 189
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTW 253
G G ++ N PR I L + VA G H +A+ ++G VY+W
Sbjct: 190 GLGNCDDVNV--------------PRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSW 235
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G G G+LGH P +D + V I+ G+++S G+++ WG
Sbjct: 236 GCGDRGQLGHGNTLGYLDPTLIDELKSKEV----TKIACGAMHSIAVLSDGKIFSWGDGS 291
Query: 314 N------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
N N + PK +M L+G ++ + G + A SWG GELGYG
Sbjct: 292 NGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYG-V 350
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S MP K++ L + +VACGY S +
Sbjct: 351 EMPSYYMPTKIEALFFKGITNVACGYATSFAV 382
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 153/367 (41%), Gaps = 40/367 (10%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +R VG + +A H +A+ G WG N GQLG G P V
Sbjct: 78 TPVPVRLPVGTTVTAIAGS--DTHSLALTSVGTVLAWGGNSFGQLGDGTTASSRTPVPVR 135
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
+ AG SH++ +T G A+G N GQLG G+ + P PVR V + VT
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVT 195
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G ++ ++S GA+ L G +GQLG GT T SS + P
Sbjct: 196 AIAGGLGHSLAVAS-TGAT-LAWGSNAFGQLGDGT-----TTGSSTPITVPQLP------ 242
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
T+ VA G H++A+ S G VY WG +G+LG D P V V
Sbjct: 243 -----TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTA- 296
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM---------YPKPLMDLSGWNLRC 335
AV+S G+ +S G WG +NG + P + G L
Sbjct: 297 --TAVVS-GADHSLALTAAGGALAWG---DNGQGQLGNGATVGSSTPVAVRVPGGATLTA 350
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ H V + ++ ++W G+LG G S+ P V + G + +VA G
Sbjct: 351 VAIHRDHAVAVTSTATALAWSRNNEGQLGNG--TTTDSSEPVAVSLPAGTAITAVAVGDD 408
Query: 395 HSLVIVD 401
HSL +VD
Sbjct: 409 HSLALVD 415
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 136/326 (41%), Gaps = 32/326 (9%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQ G+G P V + +H++ +T G LA+G N GQ
Sbjct: 60 WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG G+ + P PVR V + VTA A G ++ +++ ++ G GQLG GT
Sbjct: 120 LGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITAT--GAVFAWGDNAVGQLGDGT- 176
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
T DSS+ P + G T+ +A G H++AV S G WG +G+
Sbjct: 177 ----TTDSSL---------PVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQ 223
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD- 317
LG P + V Q LP ++AG V+S G +Y WG GD
Sbjct: 224 LGDGTTTGSSTP--ITVPQ----LPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDG 277
Query: 318 ---DWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSA 373
D P + +G + SG H + A ++WG G+LG G S+
Sbjct: 278 STSDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNG--ATVGSS 335
Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
P V + G + +VA H++ +
Sbjct: 336 TPVAVRVPGGATLTAVAIHRDHAVAV 361
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 29/300 (9%)
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+V+ + AGA R+ T V D LA+G N GQ G+G+ + P PVR V +
Sbjct: 30 VVTVTQAAGVLPAGAQRTPTAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPVGT 88
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VTA A ++ L+SV ++L G +GQLG GT T P
Sbjct: 89 TVTAIAGSDTHSLALTSV--GTVLAWGGNSFGQLGDGTTASSRT--------------PV 132
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ G T+ +A GT+H++A+ + G V+ WG G+LG D +P V +
Sbjct: 133 PVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVGT 192
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMD 337
V I+ G +S A G WG +G P+ + +
Sbjct: 193 TV----TAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQLPTVTAVA 248
Query: 338 SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+G++H + + +WG +G+LG G S+ P V + G +V G HS
Sbjct: 249 AGDVHSLALTSTGTVYAWGANSFGQLGDG--STSDSSTPIAVRVPAGTTATAVVSGADHS 306
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N +GQLG+G + P V + R H V VT +LA+ N GQ
Sbjct: 318 WGDNGQGQLGNGATVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQ 377
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
LG+G+ + EP V + +TA A G D ++ L + S
Sbjct: 378 LGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLALVDAQATS 420
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 110/236 (46%), Gaps = 21/236 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPT 102
+P L L G+ + VA G S H V + +G+ YTWG+N RGQLG G + P
Sbjct: 111 FTPRSLEALSGITVTQVACG--SQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQ 168
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
V LS + + AG H+ ++ G+ +G N GQLG G + P+ V L +
Sbjct: 169 CVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ ACG D T L+ ++ G YGQLGH + + PR
Sbjct: 229 KTVFAACGKDHTAVLTM--DGTVFTFGSGHYGQLGHNS--------------FRNALCPR 272
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+A L G + K+ACG HT+ + VY++G +G+LG RE+ VP V +
Sbjct: 273 LVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQL 328
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ SP +R L + + V+AG H A+ V G + WGRN+ GQLG GD R+ PT
Sbjct: 163 SISSPQCVRSLSSMPVVQVSAG--GDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPT 220
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+V L+ K A G+ HT V+T DG FG +GQLG S RN + P V L +
Sbjct: 221 LVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGA 280
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+VT ACG T+ L+ + + + G ++GQLG
Sbjct: 281 KVTKIACGRYHTLVLT--DHMKVYSFGCNEHGQLG 313
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDV 277
PR++ AL+G T+ +VACG+ HTV + G VYTWG G+LG ++ + P+ V
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV-- 170
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GD--DWMYPKPLMDLS 329
R+ P +SAG +S + G ++ WG+ N+ GD D P + L+
Sbjct: 171 --RSLSSMPVVQVSAGGDHSFALSVSGSVFGWGR--NDCGQLGLGDTTDRETPTLVHYLN 226
Query: 330 GWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G H V D + ++G YG+LG+ + +++ P+ V L G V
Sbjct: 227 MKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSF--RNALCPRLVAELWGAKVTK 284
Query: 389 VACGYGHSLVIVDRTNV 405
+ACG H+LV+ D V
Sbjct: 285 IACGRYHTLVLTDHMKV 301
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 38/285 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P R+ L I+ V+ C H +A+ EG Y+WG NE GQLG GD R RP
Sbjct: 482 NTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPV 540
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
+++ +S +I G HT+ +T D ++GW HGQLG S+ N++ P + L S
Sbjct: 541 LITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSH 600
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V A G + L+S A L YGQLG G+ + Q P+
Sbjct: 601 KVIQAAAGYAHSAVLTSQRYVYTFGADL--YGQLGIGS--------------HYKQVIPQ 644
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG-----F--------GGYGRLGHREQKD 268
+ +L ++I ++CG T+A+ ++ WG F YGR KD
Sbjct: 645 LVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKD 704
Query: 269 ---EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ P + FQ + P I G+ + Q+Y WG
Sbjct: 705 LNHRFYPETLQ-FQLQH---PITQIFCGNWHYIILTSVNQVYTWG 745
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 8/268 (2%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
TR RP++ I + V+ C + H +A+ + + Y+WG GQLG + P +
Sbjct: 535 TRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQI 594
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
L +K+ +A AG +H+ V+T FG + +GQLG GS ++ P V L + +
Sbjct: 595 DLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSI 654
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG T+ +S + Q+ ++Y K +S + P +
Sbjct: 655 YLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETL 714
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I ++ CG H + + S VYTWG+ G+LGH + D+ PR V R +
Sbjct: 715 QFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAI 774
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ ++ G+ S + WG+
Sbjct: 775 IG----VAVGAEFSVAFDADDNIMAWGR 798
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGA 170
+ GR+H VT N + W K +++N P + L ++ V + ACG
Sbjct: 449 RIACGRNHIAFVT--NNKELYTWGKECGGRKDNVQNTCLPMRMENLHNQGIQVVSVACGE 506
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T+ L EG + + G +YGQLG G T Y RP I ++ +
Sbjct: 507 FHTIALCE-EG--VYSWGSNEYGQLGVGDTRTRY---------------RPVLITHISSK 548
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
IV V CG HT+A+ S VY+WG+G +G+LG + +++ P+++D+ + V+
Sbjct: 549 QIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQA--- 605
Query: 290 ISAGSVNSSCTAGGGQLYMWG 310
+AG +S+ +Y +G
Sbjct: 606 -AAGYAHSAVLTSQRYVYTFG 625
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 35/237 (14%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N ++P ++ L + AAG H + + YT+G + GQLG G ++ P
Sbjct: 587 NQLTPKQIDLLDSHKVIQAAAG--YAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQ 644
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG--------------QLGSGS-- 146
+V L+ I G T+ ++ED +G N H ++ S +
Sbjct: 645 LVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKD 704
Query: 147 IRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ + P ++ L +T CG + L+SV + G GQLGH YN
Sbjct: 705 LNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVN--QVYTWGYNDCGQLGH-----YNK 757
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
D Q PR + AL I+ VA G +VA D+ + WG G++G
Sbjct: 758 ID---------QSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG 805
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + H + + + YTWG N+ GQLGH +KI + P +V L + I G +V
Sbjct: 727 CGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVA 786
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNE 150
D N +A+G N G++G I NE
Sbjct: 787 FDADDNIMAWGRNDEGKIG---IENE 809
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 26/205 (12%)
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
SS L + + PR R +ACG NH V + +YTWG GR +
Sbjct: 436 SSNDLLFTSTPRAR------------IACGRNHIAFVTNNKELYTWGKECGGR--KDNVQ 481
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPK 323
+ +P R++ + + C G +Y WG + GD +
Sbjct: 482 NTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG---VYSWGSNEYGQLGVGDTRTRYR 538
Query: 324 PLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
P++ +S + + G H + +D SWG +G+LG ++ PK++D+
Sbjct: 539 PVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLK--SVENQLTPKQIDL 596
Query: 381 LEGMHVISVACGYGHSLVIVDRTNV 405
L+ VI A GY HS V+ + V
Sbjct: 597 LDSHKVIQAAAGYAHSAVLTSQRYV 621
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + +++ G HT+ +T G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
+ QLG P+ L+ E + CG+ ++ LS + +L+ G
Sbjct: 68 DYSQLGHDL------PTKRPLLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 119
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGH TD E V+L P+ + L +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
WG YG+LG D P R+ + P A I+ G +S + G ++ W
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
G+ N+ + YP L L +R + G+ F+ + + G YG+L
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+ V L G + VACG H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D +V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
D + P ++ L + G +H+ ++++ G +G N GQLG N
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG +
Sbjct: 238 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN------ 289
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQK 267
+ PR + L G TI +VACG HT+A V S+G VY +G G G+LG R K
Sbjct: 290 --------EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 268 DEWVPRRV 275
+P+ V
Sbjct: 342 SLMLPQVV 349
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+ L+C GST +G G D +++P+++ ++ VA G H + + G+
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATGK 60
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y G N+ QLGH + RP ++ EL Y I + G H++ +++ G L++G N
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 139 HGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG + + ++ P VR LV++ V ACG + ++ L+S + + G YGQLG
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLG 176
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ N+ + P + L G + +ACG NH+ + G V+ WG
Sbjct: 177 VNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGK 311
G+LG ++ + P ++ + V ++ G S G ++ +G+
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 312 LKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYG 368
L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTRS 339
Query: 369 QKSSAMPKKV 378
KS +P+ V
Sbjct: 340 TKSLMLPQVV 349
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 159/384 (41%), Gaps = 46/384 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +VA G H V + +TWG G+LGHG +P
Sbjct: 248 DILVPKPLESNVMLDVSYVACGVK--HAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPR 305
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V LS ++ G HT +T G+ +G H G LG GS + P P+
Sbjct: 306 LVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 365
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V+A +CG T ++S + G +G LGHG E
Sbjct: 366 EGL--QVSAVSCGTWHTALITS--SGKLYTFGDGTFGVLGHGNR--------------ET 407
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ- 266
P+ + +L G + V+CG HT AV S G ++TWG G RLGH ++
Sbjct: 408 ISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRS 467
Query: 267 ---KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
K VP +D V I + TAG ++G+L N +D YP+
Sbjct: 468 SKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSS---VYGQLGNPNNDGRYPR 524
Query: 324 PLMD-LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ + L G + + G H V S +WG G LG+G + + P V+ L
Sbjct: 525 LVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEAL 582
Query: 382 EGMHVISVACGYGHSLVIVDRTNV 405
V +ACG G + I +V
Sbjct: 583 RDRSVKRIACGSGFTAAICQHKSV 606
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + +++ G HT+ +T G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
+ QLG P+ L+ E + CG+ ++ LS + +L+ G
Sbjct: 68 DYSQLGHDL------PTKRPLLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 119
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGH TD E V+L P+ + L +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
WG YG+LG D P R+ + P A I+ G +S + G ++ W
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
G+ N+ + YP L L +R + G+ F+ + + G YG+L
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+ V L G + VACG H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D +V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
D + P ++ L + G +H+ ++++ G +G N GQLG N
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG +
Sbjct: 238 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN------ 289
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQK 267
+ PR + L G TI +VACG HT+A V S+G VY +G G G+LG R K
Sbjct: 290 --------EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 268 DEWVPRRV 275
+P+ V
Sbjct: 342 SLMLPQVV 349
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+ L+C GST +G G D +++P+++ ++ VA G H + + G+
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATGK 60
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y G N+ QLGH + RP ++ EL Y I + G H++ +++ G L++G N
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 139 HGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG + + ++ P VR LV++ V ACG + ++ L+S + + G YGQLG
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLG 176
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ N+ + P + L G + +ACG NH+ + G V+ WG
Sbjct: 177 VNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGK 311
G+LG ++ + P ++ + V ++ G S G ++ +G+
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 312 LKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYG 368
L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTRS 339
Query: 369 QKSSAMPKKV 378
KS +P+ V
Sbjct: 340 TKSLMLPQVV 349
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 39/285 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
NL+ PT + V +++FV C H V +G+ TWG ++G+LGH ++Q++
Sbjct: 174 NLLLPTLI---VAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKN 230
Query: 103 ----------------IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
+ L KI +A G HT +T+DG +G+ K+G LG G+
Sbjct: 231 KSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGN 290
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
P V L S + CG D+T L + +I + G +YGQLG T + N
Sbjct: 291 WDQVDLPKKVEGL-SNIVKIDCGMDYTFALD--KDGNIYSWGSNRYGQLGT-TQSNINKH 346
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+ ++L P +V ++CG H+ ++ KG + WG+G G+LGH+E+
Sbjct: 347 NVPIQLQL---PH-------GSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEK 396
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ P++++ + P V+ G ++ G+L+++G+
Sbjct: 397 TNLNQPKKLEFTE-----PLRRVVCGGG-HTGVITTAGKLFLFGR 435
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ + A C H + +G YTWG + G LGHG+ Q D P V LS I K G
Sbjct: 255 KIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLSN--IVKIDCG 312
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTATACGADFTV 174
+T + +DGN ++G N++GQLG+ P++ + S V +CG + +
Sbjct: 313 MDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSA 372
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+L+ A I G GQLGH N QP+ E + +V
Sbjct: 373 FLNDKGEAFIWGYG--NDGQLGHKEKTNLN------------QPKKLEFT----EPLRRV 414
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
CG HT + + G ++ +G G G+LG + + R++
Sbjct: 415 VCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAFRIE 456
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 141/345 (40%), Gaps = 45/345 (13%)
Query: 81 TWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+WG + GQLG+G++ + P+ V LS I + A + VT G +G +
Sbjct: 101 SWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRG 160
Query: 140 GQLGS----GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G L N + P+ + + ACG ++ + ++ G P G+L
Sbjct: 161 GSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVT--KDGKLITWGNPDQGKL 218
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIA----------ALAGETIVKVACGTNHTVAVD 245
GH + +K+ S PR+ A AL + I++ +CG HT +
Sbjct: 219 GHNAQLQQESKNKSYS--------PRSYADYNAINFVGGALESKKIIQASCGFQHTACLT 270
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G VYTWGFG G LGH +P++V+ +N++ I G + G
Sbjct: 271 QDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGL--SNIVK----IDCGMDYTFALDKDGN 324
Query: 306 LYMWGK--------LKNNGDDWMYPKPLMDLSG-WNLRCMDSGNMHH-FVGADSSCISWG 355
+Y WG ++N + P L G ++ + G H F+ WG
Sbjct: 325 IYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWG 384
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ G+LG+ + + PKK++ E + V CG GH+ VI
Sbjct: 385 YGNDGQLGHKE--KTNLNQPKKLEFTEPLR--RVVCGGGHTGVIT 425
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
L++G ++GQLG+G+ + PSPV+ L E + D + ++S +
Sbjct: 100 LSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTS-------QGQI 152
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
+G+ G+ ++ + + L P I A + V+VACG H V G
Sbjct: 153 YTWGKTRGGSLSQQKSLSRATNLLL-----PTLIVAPEVQ-FVQVACGKTHLAGVTKDGK 206
Query: 250 VYTWGFGGYGRLGHREQKDE------WVPRRVDVFQRNNV----LPPEAVISA--GSVNS 297
+ TWG G+LGH Q + + PR + N L + +I A G ++
Sbjct: 207 LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHT 266
Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
+C G++Y WG KN N D PK + LS N+ +D G + F + D +
Sbjct: 267 ACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTFALDKDGN 324
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIVDR 402
SWG +YG+LG +P ++ + G HV+ ++CG HS + D+
Sbjct: 325 IYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDK 377
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 167/397 (42%), Gaps = 66/397 (16%)
Query: 44 LVSPTRLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
L P+ ++ L DI V A+G +S AV +G+ YTWG+ G L + R
Sbjct: 119 LSIPSPVQVLSDEDIIQVNASGDISA---AVTSQGQIYTWGKTRGGSLSQQKSLSRATNL 175
Query: 103 IVSEL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG------------SGSI 147
++ L + + + G++H VT+DG + +G G+LG S S
Sbjct: 176 LLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSP 235
Query: 148 RNEIEPSPVRCL-----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
R+ + + + + ++ +CG T L+ + + G + G LGHG
Sbjct: 236 RSYADYNAINFVGGALESKKIIQASCGFQHTACLT--QDGEVYTWGFGKNGALGHGN--- 290
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
++ P+ + L+ IVK+ CG ++T A+D G +Y+WG YG+LG
Sbjct: 291 -----------WDQVDLPKKVEGLS--NIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLG 337
Query: 263 HREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---------K 311
+ VP ++ + ++ + IS G +S+ G+ ++WG K
Sbjct: 338 TTQSNINKHNVPIQLQLPHGSSHVVD---ISCGEEHSAFLNDKGEAFIWGYGNDGQLGHK 394
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
K N + PK L + + R + G + +G + G+LG G +
Sbjct: 395 EKTNLNQ---PKKL-EFTEPLRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESM 450
Query: 372 SAM---PKK-VDILEGM--HVISVACGYGHSLVIVDR 402
+A PK+ V+I + + V+ +A G H L I +
Sbjct: 451 AAFRIEPKEVVNISQTLKAEVLEIALGSNHCLAIAAK 487
>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
coralloides DSM 2259]
gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
2259]
Length = 827
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 169/359 (47%), Gaps = 41/359 (11%)
Query: 50 LRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+RP+ G+ D+R V+AG + H +A+ +G + WG N GQLG G K R P V L+
Sbjct: 168 VRPVPGLTDVRAVSAG--NEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLT 225
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
+ I + AG S ++ + +DG A+G N+ GQLG G++ + P V LV VT A
Sbjct: 226 EV-IAVSAAGYS-SLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLV-RVTGLAA 282
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + L+ + ++ G YGQLG G + E PRP A++ L
Sbjct: 283 GRGHS--LAVLADGTVRAWGANIYGQLGDG------------GFSLEGNPRPVAVSKL-- 326
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+V VA T+ + AV S G V +WG G LG ++ + VP + VF +V A
Sbjct: 327 TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSK--VFGLTDV----A 380
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD--DWMY----PKPLMDLSGWNLRCMDSGNMH 342
+S G + G G + WG ++G D Y P P+ L+G + + +G H
Sbjct: 381 TVSVGGYYAVALMGDGTVRSWGN-NDSGQLGDGTYIRHTPTPVPGLTG--VTAVSAGEDH 437
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V +D S WG Q+ +LG P P +V L + VA G HSL ++
Sbjct: 438 VVAVLSDGSPRVWGDNQFMQLGRPPESVNRGG-PVQVPGLTEASL--VAAGKTHSLALL 493
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 160/383 (41%), Gaps = 59/383 (15%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
+A +A+ +G + WG NE GQLG D R T V L ++ AGR
Sbjct: 227 VIAVSAAGYSSLALRKDGTVWAWGDNESGQLG--DGTMEGRLTPVQVLDLVRVTGLAAGR 284
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-----LVSEVTAT----ACGA 170
H++ V DG A+G N +GQLG G E P PV +VS +T A +
Sbjct: 285 GHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVHS 344
Query: 171 DFTV--WLSSVEG----------------------ASILNAGLPQYGQLGHGTDNEYNTK 206
D TV W S+V+G A++ G +G GT +
Sbjct: 345 DGTVSSWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVGGYYAVALMGDGTVRSWGNN 404
Query: 207 DSSVKLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH- 263
DS +L R P + L G + V+ G +H VAV S G WG + +LG
Sbjct: 405 DSG-QLGDGTYIRHTPTPVPGLTG--VTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRP 461
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDD 318
E + P +V ++++AG +S G ++ WG L +
Sbjct: 462 PESVNRGGPVQVPGLTE------ASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEP 515
Query: 319 WMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P P+ +R + +G N V A+ + ++WG+ +G+L G +S+++ +
Sbjct: 516 GASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQL-----GSESASIFQI 570
Query: 378 VDILEGMH-VISVACGYGHSLVI 399
+ + G+ + +VA G+ +SL +
Sbjct: 571 PEPIFGLSGITAVAMGHWYSLAL 593
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 110/275 (40%), Gaps = 70/275 (25%)
Query: 52 PLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
P+ G+ I VA G + +A+ +G ++WG N GQLG G +R RP V+ L++
Sbjct: 573 PIFGLSGITAVAMG--HWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQV 630
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG- 169
AGA SH + + DG A+G N G LG G+ + P V+ L + V A A G
Sbjct: 631 TAIAAGA--SHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQVQGL-TGVIAVAAGE 687
Query: 170 -------ADFTVW----------------------------------------LSSVEGA 182
D TVW L++VEG
Sbjct: 688 YHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLAGVQRIAAGEKHALAAVEGG 747
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
++ G GQLG G E ++ L PR IAA G HT+
Sbjct: 748 PLVAFGKNTSGQLGLGERKENQSRGEIASLR-----NPRGIAA-----------GIAHTL 791
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
AV + G V+ WG G+LG+ E + P V +
Sbjct: 792 AVAADGTVWAWGANATGQLGNGEAANSPQPITVKL 826
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 136/331 (41%), Gaps = 48/331 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L GV R +AAG S +AV G WG GQLG P +
Sbjct: 520 TPVQVPKLAGV--RSLAAGENSS--LAVLANGTVMAWGYGLFGQLGSESASIFQIPEPIF 575
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
LS I G +++ + EDG ++G+N GQLG G+ P V L ++VTA
Sbjct: 576 GLSG--ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGL-TQVTA 632
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A GA + L + ++ G G LG GT +T P +
Sbjct: 633 IAAGASHALALRA--DGTVWAWGSNALGTLGDGTQTSRST--------------PVQVQG 676
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF---QRNN 282
L G ++ VA G H++A+ G V++WG G+LG P +V QR
Sbjct: 677 LTG--VIAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLAGVQR-- 732
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP-------LMDLSGWNLRC 335
I+AG ++ GG L +GK +G + + + L N R
Sbjct: 733 -------IAAGEKHALAAVEGGPLVAFGK-NTSGQLGLGERKENQSRGEIASLR--NPRG 782
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ +G H V AD + +WG G+LG G
Sbjct: 783 IAAGIAHTLAVAADGTVWAWGANATGQLGNG 813
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIV 104
SP ++ L GV + +AAG H +A G +G+N GQLG G+ K + R I
Sbjct: 720 SPGQVPGLAGV--QRIAAG--EKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIA 775
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
S + I AG +HT+ V DG A+G N GQLG+G N +P V+
Sbjct: 776 SLRNPRGIA---AGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQPITVKL 826
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 117/254 (46%), Gaps = 22/254 (8%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
C + H +A+ G YTWG E G+LGHGD R P V L + + A G +HT
Sbjct: 558 VACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHT 617
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVE 180
V+T G+ FG ++G+LG G + P P+ + ++ CG +FT L
Sbjct: 618 AVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALD--R 675
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL---AGETIVKVACG 237
S+ G GQ G G Y +D V PR + L AG ++V VACG
Sbjct: 676 QGSVFTWGKTGEGQCGLG----YVDRDQVV---------PRCVDKLRDVAGSSVVDVACG 722
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE-AVISAGSVN 296
HTV + + G +Y+WG G YG+LG + +P RV + P + A + G+ +
Sbjct: 723 YTHTVVLTASGELYSWGLGEYGQLGTGDVYQP-LPARVQLPADALCAPDQLARVYCGAFH 781
Query: 297 SSCTAGGGQLYMWG 310
S T ++ WG
Sbjct: 782 SIATTEQRVMFAWG 795
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 159/380 (41%), Gaps = 61/380 (16%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG------HGDKIQRDR------------P 101
V C H + + G Y++G NE ++ H + + P
Sbjct: 479 IVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAP 538
Query: 102 TIVSELSKYK------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+V EL+ K I G H++ +T+ G +G + G+LG G +R+ P
Sbjct: 539 HLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRK 598
Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V L+ E V + +CG T L++ S+ G + G+LG G DN++ +D+
Sbjct: 599 VMSLLRESVVSASCGGAHTAVLTA--KGSVFTFGRGRNGRLGLG-DNKW--RDT------ 647
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVP 272
P P + G +I V CG N T A+D +G V+TWG G G+ LG+ + +D+ VP
Sbjct: 648 ---PHP-IVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVD-RDQVVP 702
Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGD----DWMYPKPLMD 327
R VD + +V V ++ G ++ G+LY WG L G D P P
Sbjct: 703 RCVD--KLRDVAGSSVVDVACGYTHTVVLTASGELYSWG-LGEYGQLGTGDVYQPLPARV 759
Query: 328 LSGWNLRCMDSGNMHHFVGADSSC--------ISWGHAQYGELGYGPYGQKSSAMPKKVD 379
+ C + GA S +WG YG G G K P+++D
Sbjct: 760 QLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDK--PERID 817
Query: 380 ILEGMHVISVACGYGHSLVI 399
+ VACG+ +++ +
Sbjct: 818 CFSSQTELVVACGHKYTIAL 837
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKY---KIKKAGAGRSHTVVVT 126
A+D +G +TWG+ GQ G G + RD+ P V +L + G +HTVV+T
Sbjct: 672 ALDRQGSVFTWGKTGEGQCGLG-YVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLT 730
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-----PSPVRCLVSEVTATACGADFTVWLSSVEG 181
G ++G ++GQLG+G + + P+ C ++ CGA ++ ++ E
Sbjct: 731 ASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVYCGAFHSI--ATTEQ 788
Query: 182 ASILNAGLPQYGQ--LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ GL YG LGH + + +P I + +T + VACG
Sbjct: 789 RVMFAWGLNSYGACGLGHTANKD----------------KPERIDCFSSQTELVVACGHK 832
Query: 240 HTVAVDSKGYVYT 252
+T+A++ +YT
Sbjct: 833 YTIALEVNASLYT 845
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 159/380 (41%), Gaps = 46/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ ++ G H V +G +TWG + G+LGHG +P
Sbjct: 250 DMLIPKPLESDVVLDVNYIEPGV--SHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPR 307
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V L+ + G HT V+ G+ +G H G LG G+ + P V +
Sbjct: 308 LVDSLAITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPL 367
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V + ACGA T ++S + G G LGHG D E +AY
Sbjct: 368 EGHQVVSIACGAWHTALITS--NGKLFTFGDGTLGVLGHG-DRE--------SVAY---- 412
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV-------------DSKGYVYTWGFGGYGRLGHRE 265
P+ + L+G VKVACG HT A+ S ++TWG G RLGH
Sbjct: 413 -PKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN 471
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
++ P V N L V S+ + TA G M +G+L N D
Sbjct: 472 KETYLQPTCVAALADYNFL---QVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKV 528
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L G + + G H + + S +WG G LG+G + + P V+
Sbjct: 529 PILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKT--PILVE 586
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV ++ACG + I
Sbjct: 587 ALKERHVKNIACGANFTTCI 606
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 128/299 (42%), Gaps = 18/299 (6%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ GE+ G D+ GR D + P + L + FVA C H AV + G
Sbjct: 280 RQGEIFTWGE---DSGGRLGHGFDKDYGKPRLVDSLAITSVSFVA--CGEYHTCAVSISG 334
Query: 78 RCYTWG--RNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
YTWG + G LGHG + P V+ L +++ G HT ++T +G F
Sbjct: 335 DLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTF 394
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G G LG G + P ++ L + ACG T + V S ++
Sbjct: 395 GDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSK 454
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+L D + + K Y +P +AALA ++VACG + TVA+ + G+V+T
Sbjct: 455 KLFTWGDGDQYRLGHANKETYL---QPTCVAALADYNFLQVACGHSLTVALTASGHVFTM 511
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
G YG+LG+ D VP V D Q V IS G+ + + +LY WG+
Sbjct: 512 GSKAYGQLGN-PTSDGKVPILVRDKLQGETV----EEISCGTHHVAVLTSRSELYTWGR 565
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 32/305 (10%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G SH +VT G +G + G+LG G ++ +P V L ++ V+ ACG T +
Sbjct: 271 GVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAV 330
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S G G LGHGTD ++ P+ R L G +V +AC
Sbjct: 331 SISGDLYTWGDGTHNAGILGHGTDVSHSI------------PK-RVTGPLEGHQVVSIAC 377
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN-------VLPPEAV 289
G HT + S G ++T+G G G LGH +++ P+ + + + V A+
Sbjct: 378 GAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAI 437
Query: 290 ISAG--SVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN- 340
I S +SS T+ +L+ WG +L + N + ++ P + L+ +N + G+
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHS 497
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + A + G YG+LG K + + D L+G V ++CG H V+
Sbjct: 498 LTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVR--DKLQGETVEEISCGTHHVAVLT 555
Query: 401 DRTNV 405
R+ +
Sbjct: 556 SRSEL 560
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 128/274 (46%), Gaps = 28/274 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H V EG +TWG N QLG+G P I
Sbjct: 63 IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
+ LS + + G H++V+T DG A+G+N GQ+GSGS N +P P R S
Sbjct: 122 STNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN--QPIPRRVTSSLQ 179
Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V ACG + ++ V+ + G GQLG G+ Q
Sbjct: 180 NKVVVNIACGQMCS--MAVVDNGEVYVWGYNGNGQLGLGSSGN--------------QST 223
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P + AL G + +VACG HT+ + +G VY WG YG+LG + ++ P V V +
Sbjct: 224 PCRL-ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV-VVE 281
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 282 KDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 313
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 33/307 (10%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 11 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPRRLDS 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 71 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 116 LVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPL-MDLSGW 331
+N V+ I+ G + S G++Y+WG N G P + L G
Sbjct: 176 SSLQNKVV---VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGV 232
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV- 389
++ + G H V D +WG YG+LG G +S P ++E +I +
Sbjct: 233 RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEIA 289
Query: 390 ACGYGHS 396
AC H+
Sbjct: 290 ACHSAHT 296
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P RL L GV ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 219 GNQSTPCRL-ALQGVRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 275
Query: 102 TIVSELSKYKIKKAGAGRSHT 122
T V I+ A +HT
Sbjct: 276 TPVVVEKDRIIEIAACHSAHT 296
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK----AGAGRSHTVV 124
H +A+ EG Y+WG + G+LGHGD R+ PT+V LS ++ + G +++
Sbjct: 250 HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAA 309
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
+T DG +G +G+LG GS +++ P+ V L V CG+ L+ + +
Sbjct: 310 ITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGT 369
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ + G YG+LG G + T P+ I L G+ IV+V CG ++A
Sbjct: 370 VWSWGDGDYGKLGRGGSDGCKT--------------PKIIDRLQGQDIVRVCCGAQFSLA 415
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G+++TWG G RLGH ++ P++++ + V+ ++ GS++
Sbjct: 416 LTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVD----VAVGSMHCLVMTEE 471
Query: 304 GQLYMWGK 311
G++Y WG+
Sbjct: 472 GEVYGWGR 479
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 160/369 (43%), Gaps = 49/369 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIV 104
P + L ++ VAA H +A+ EG Y+WG + G+LGHGD + + +V
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
Y G H + +T +G ++G G+LG G + EP+ VR L +
Sbjct: 240 ---IVYPYHPEG---KHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL 293
Query: 163 ---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V CG+ ++ +++ + G YG+LGHG+ E Q
Sbjct: 294 GRHVVHIVCGSTYSAAITA--DGELFTWGRGNYGRLGHGSS--------------EDQLT 337
Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + +L G ++ + CG+ T+AV G V++WG G YG+LG P+ +D
Sbjct: 338 PTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDR 397
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLSGW 331
Q +++ + G+ S G ++ WGK L + ++ + +PK L L G
Sbjct: 398 LQGQDIVR----VCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGK 453
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKS--SAMPKKVDILEGMHVIS 388
+ + G+MH V + WG G+LG + KS + MP L+G +
Sbjct: 454 KVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMP-----LDGKSISG 508
Query: 389 VACGYGHSL 397
+ACG S
Sbjct: 509 IACGPAQSF 517
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 36/318 (11%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P ++ L+ ++ K A H + +T +G ++G G+LG G + V
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V G + S E + + G G+LGHG N ++
Sbjct: 240 IVYPYHPE--GKHYMALTSEGE---VYSWGNGDGGRLGHGDTN--------------SRE 280
Query: 219 RPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P + L+G+ +V + CG+ ++ A+ + G ++TWG G YGRLGH +D+ P
Sbjct: 281 EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTL 340
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDL 328
V + V+ + +G + G ++ W GKL G D PK + L
Sbjct: 341 VVSLKGRRVI--DICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRL 398
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G + I +WG LG+G ++ PK+++ L G V+
Sbjct: 399 QGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT--EEHIRFPKQLEGLRGKKVV 456
Query: 388 SVACGYGHSLVIVDRTNV 405
VA G H LV+ + V
Sbjct: 457 DVAVGSMHCLVMTEEGEV 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + L G DI V C + +A+ G +TWG+ + +LGHG + P +
Sbjct: 391 TPKIIDRLQGQDI--VRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLE 448
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L K+ G H +V+TE+G +G N GQLG S + +P+ + ++
Sbjct: 449 GLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMPLDGKSISG 508
Query: 166 TACG-ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ-----PR 219
ACG A W S+ G + +P + HGT + V + + P+
Sbjct: 509 IACGPAQSFCWTST--GHWSVGLRVPFVVDVCHGTFQHLDQLLQRVCEGLDGRSDWPPPQ 566
Query: 220 PRAIAALAGETIVKV 234
+ A+AG ++++
Sbjct: 567 EKECMAVAGLNLLRL 581
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 106/269 (39%), Gaps = 37/269 (13%)
Query: 5 EAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSPT 48
E +V +GK+ G + + CGST A+ GR + ++PT
Sbjct: 280 EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPT 339
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
+ L G + + G +AV +G ++WG + G+LG G P I+ L
Sbjct: 340 LVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQ 399
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
I + G ++ +T+ G+ +G +LG G+ + P + L +V A
Sbjct: 400 GQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVA 459
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G+ + ++ E + G GQLG D+ ++TK + L
Sbjct: 460 VGSMHCLVMT--EEGEVYGWGRNDQGQLG---DSSFSTKSDP------------TLMPLD 502
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G++I +ACG + S G+ W G
Sbjct: 503 GKSISGIACGPAQSFCWTSTGH---WSVG 528
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 155/370 (41%), Gaps = 44/370 (11%)
Query: 29 CWDAVGRRKGALDGNLVSPTRLRPLV--GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
CW GR G+ + RL P+ G+ A S C +D R WGRN
Sbjct: 499 CW---GRNSSGQLGDGTTERRLTPVTVSGLSAATALAAGDSHTCALLDTR-RVRCWGRNS 554
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
GQLG G + R P VS LS AG SHT + + G +GWN GQLG G+
Sbjct: 555 SGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGT 612
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ + P+ V L S VTA A GA+ T L ++ ++ G GQLG GT + T
Sbjct: 613 RTDRVTPAAVSGL-SGVTALAAGANHTCAL--MDSGTVQCWGRNSSGQLGDGTRTDRVT- 668
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
P A++ L+G + +A G NHT A+ G V WG G+LG
Sbjct: 669 -------------PAAVSGLSG--VTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTT 713
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWM 320
D P V + L + AG+ ++ G + WGK GD D +
Sbjct: 714 TDRVTPAAV------SGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRL 767
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + LSG + + +G+ H ++ WG +G LG P S +P+ V
Sbjct: 768 TPVAVSGLSG--ITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPL--DYSPLPRTVV 823
Query: 380 ILEGMHVISV 389
I+ I V
Sbjct: 824 IIPHQVFIPV 833
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 148/355 (41%), Gaps = 42/355 (11%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R +A H A+ G + WG N GQLG G R P VS LS + AG
Sbjct: 77 RVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMPVAVSGLSG--VTALAAG 134
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
R HT + G +G N GQLG +I N + P V L S V A A G T L
Sbjct: 135 RYHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPVAVSGL-SGVIALAAGDRHTCAL-- 191
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
++ ++ G ++GQLG GT N+ T P A++ L+G + +A G
Sbjct: 192 LDTRTVRCWGENEHGQLGDGTTNDRWT--------------PVAVSGLSG--VTALAAGG 235
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
HT A + G V WG G G+LG + P V + L ++AG ++
Sbjct: 236 RHTCAALNTGTVQCWGGNGAGQLGDGTRTSRLTPMAV------SGLSGATALAAGFEHTC 289
Query: 299 CTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
G + WG L ++G + + P + LSG + + +G+ H +
Sbjct: 290 ALLDTGTVRCWG-LNSSGQLGDGTTERRLTPVAVSGLSG--VTALAAGDFHTCAVLQTET 346
Query: 352 I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ WG G+LG G ++ + P V L G ++A G H+ ++ V
Sbjct: 347 VQCWGLNSSGQLGDGTTERRLT--PVSVSGLSGS--TALAAGGVHTCALLQTGTV 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 147/353 (41%), Gaps = 44/353 (12%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+AAG V H A+ G WGRNE GQLG G +R P +VS LS AG
Sbjct: 381 LAAGGV--HTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGATALT--AGDR 436
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HT V + + +G N GQLG G+ + P V L S T+ A G T L +V
Sbjct: 437 HTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGL-SGATSLAAGDGHTCALMNVR 495
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
A G GQLG GT E + P ++ L+ T +A G +H
Sbjct: 496 TAQCW--GRNSSGQLGDGTT--------------ERRLTPVTVSGLSAAT--ALAAGDSH 537
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T A+ V WG G+LG + D P V + L ++AG+ + +CT
Sbjct: 538 TCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAV------SGLSGATALAAGN-SHTCT 590
Query: 301 ---AGGGQLYMWGKLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI- 352
G Q + W GD D + P + LSG + + +G H DS +
Sbjct: 591 LLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLSG--VTALAAGANHTCALMDSGTVQ 648
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG G+LG G + + P V L G V ++A G H+ ++D V
Sbjct: 649 CWGRNSSGQLGDGTRTDRVT--PAAVSGLSG--VTALAAGANHTCALMDSGTV 697
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 145/368 (39%), Gaps = 44/368 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L GV +AAG H AV WG N GQLG G +R P V
Sbjct: 317 LTPVAVSGLSGVTA--LAAG--DFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSV 372
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
S LS AG HT + + G +G N+ GQLG G+ + P V L S T
Sbjct: 373 SGLSGSTALAAGG--VHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGL-SGAT 429
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G T + A P GQLG GT E + P ++
Sbjct: 430 ALTAGDRHTCAVLQTRTAQCWGENSP--GQLGDGTT--------------ERRLTPVTVS 473
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L+G T +A G HT A+ + WG G+LG + P V + L
Sbjct: 474 GLSGAT--SLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERRLTPVTV------SGL 525
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDS 338
++AG ++ ++ WG+ + GD D + P + LSG + +
Sbjct: 526 SAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSG--ATALAA 583
Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
GN H D+ + WG G+LG G + + P V L G V ++A G H+
Sbjct: 584 GNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVT--PAAVSGLSG--VTALAAGANHTC 639
Query: 398 VIVDRTNV 405
++D V
Sbjct: 640 ALMDSGTV 647
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 120/307 (39%), Gaps = 36/307 (11%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
S L ++ AGR HT + G +GWN GQLG G+ + P V L S VT
Sbjct: 71 SPLPLSRVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMPVAVSGL-SGVT 129
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G T L + ++ GL GQLG T T P A++
Sbjct: 130 ALAAGRYHTCAL--LNTGTVQCWGLNSSGQLGDWTITNRVT--------------PVAVS 173
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L+G ++ +A G HT A+ V WG +G+LG D W P V L
Sbjct: 174 GLSG--VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLSGVTAL 231
Query: 285 PPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
A ++ G+V G GQL + P + LSG + +G
Sbjct: 232 AAGGRHTCAALNTGTVQCWGGNGAGQLG-----DGTRTSRLTPMAVSGLSG--ATALAAG 284
Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
H D+ + WG G+LG G ++ + P V L G V ++A G H+
Sbjct: 285 FEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLT--PVAVSGLSG--VTALAAGDFHTCA 340
Query: 399 IVDRTNV 405
++ V
Sbjct: 341 VLQTETV 347
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 41/342 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVT 126
H V G YT G N G+LG G + ++ +P +VS LSKYK+ + G SHT +
Sbjct: 33 HTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAII 92
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEP-----SPVRCLVSEVTATACGADFTVWLSSVEG 181
+ G ++G + GQLG S + P S ++ + + VT +CG TV + ++
Sbjct: 93 DSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTV--AVLKN 150
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ + G + GQLG G N+ Q +P + +L+ I+KV CG HT
Sbjct: 151 GQVCSFGSGKKGQLGTGNQNK--------------QYKPFLLNSLS--QIIKVKCGFYHT 194
Query: 242 VAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ +D G VY+ G G+LG + + PR V + + + I AGS +S+
Sbjct: 195 LFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFI----KKIFAGS-HSAAI 249
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHA 357
++Y +G K+ ++YP+ L+ + ++ + GN HF V D SWG
Sbjct: 250 TDANEIYFFG--KSQLGQFLYPQ-LVRICQGDVNEISIGN--HFGVAVTYDGKVYSWGIN 304
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
Q G+LG G +P V+ L VIS CG + + +
Sbjct: 305 QQGQLGQGD--SDVRIIPSLVEPLNEKKVISATCGENYVICL 344
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 121/320 (37%), Gaps = 47/320 (14%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G L GS +G + +L N P + L + V+ G H A+ G
Sbjct: 39 KNGYLYTMGSNALGKLGIGQQSLQ-NSFQPQLVSALSKYKVMQVSCG--HSHTCAIIDSG 95
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-----IKKAGAGRSHTVVVTEDGNSL 132
++WG + GQLG P +V+ S K + G HTV V ++G
Sbjct: 96 ELFSWGDSSEGQLGINSNGSHYNPQLVN-FSDLKGINTFVTDVSCGYYHTVAVLKNGQVC 154
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
+FG K GQLG+G+ + +P + L S++ CG T++L E + + GL
Sbjct: 155 SFGSGKKGQLGTGNQNKQYKPFLLNSL-SQIIKVKCGFYHTLFLD--ESGRVYSCGLNDE 211
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-------------------- 232
GQLG G NE N + L E + A I
Sbjct: 212 GQLGQG-HNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLYPQ 270
Query: 233 ----------KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+++ G + VAV G VY+WG G+LG + +P V+
Sbjct: 271 LVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKK 330
Query: 283 VLPPEA----VISAGSVNSS 298
V+ VI G V +S
Sbjct: 331 VISATCGENYVICLGQVMNS 350
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPE 287
I ++ACG +HT V GY+YT G G+LG +Q ++ + P+ V + V+
Sbjct: 23 VIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQ-- 80
Query: 288 AVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLM---DLSGWNLRCMD-S 338
+S G ++ G+L+ W G+L N + Y L+ DL G N D S
Sbjct: 81 --VSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVS 138
Query: 339 GNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+H V + S+G + G+LG G Q P ++ L +I V CG+ H+
Sbjct: 139 CGYYHTVAVLKNGQVCSFGSGKKGQLGTG--NQNKQYKPFLLNSLS--QIIKVKCGFYHT 194
Query: 397 LVI 399
L +
Sbjct: 195 LFL 197
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 22/264 (8%)
Query: 148 RNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
RN + P C V ACG D T +++ + + G G+LG G + N+
Sbjct: 8 RNSVFYYPRVCSFQIVIHQLACGLDHTAFVA--KNGYLYTMGSNALGKLGIGQQSLQNS- 64
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+P+ ++AL+ +++V+CG +HT A+ G +++WG G+LG
Sbjct: 65 -----------FQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSN 113
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYP 322
+ P+ V+ + +S G ++ GQ+ +G K G+
Sbjct: 114 GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQY 173
Query: 323 KPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
KP + S + + G H F+ S G G+LG G + + + + P+ V L
Sbjct: 174 KPFLLNSLSQIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQG-HNEGNISSPRLVLEL 232
Query: 382 EGMHVISVACGYGHSLVIVDRTNV 405
E + + G HS I D +
Sbjct: 233 EHSFIKKIFAG-SHSAAITDANEI 255
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 29/254 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
++ +AAG + H VA+ +G + WG N+ GQLG G R P V +S + A
Sbjct: 228 VKAIAAG--AYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAA 283
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G HTV + DG A+G N+H QLG+ + + E +PV+ +S+V A A GA +TV L
Sbjct: 284 GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVL 343
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ ++ G+ +YG+LG GT N +S + +AIAA
Sbjct: 344 KN--DGTVWAWGVNEYGKLGDGTTN-----NSFTPVQVNGISNVKAIAA----------- 385
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G HTV + + G V+TWG+ YG LG+ D P +V + I+AG+ +
Sbjct: 386 GAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQV------KGISDVKAIAAGACH 439
Query: 297 SSCTAGGGQLYMWG 310
+ G ++ WG
Sbjct: 440 TVALKNDGTVWAWG 453
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ N P +++ + D+ +AAG H VA+ +G + WG NE Q
Sbjct: 252 WNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAAGM--YHTVALKNDGTVWAWGDNEHDQ 307
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG+ + T V +K AG S+TVV+ DG A+G N++G+LG G+ N
Sbjct: 308 LGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNN 367
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P V +S V A A GA TV L + ++ G YG+LG+GT T DSS
Sbjct: 368 SFTPVQVNG-ISNVKAIAAGAYHTVVLKN--DGTVWTWGYNHYGELGNGT-----TVDSS 419
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+ + +AIAA G HTVA+ + G V+ WG YG LG+ D
Sbjct: 420 TPVQVKGISDVKAIAA-----------GACHTVALKNDGTVWAWGCNYYGELGNGTAVDS 468
Query: 270 WVPRRV 275
P +V
Sbjct: 469 STPVQV 474
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 32/273 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+K AG HTV + DG A+GWN GQLG G+ N P V+ +S+V A A G
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKG-ISDVVAIAAGMY 286
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
TV L + ++ G ++ QLG+ T E E P + ++ +
Sbjct: 287 HTVALKN--DGTVWAWGDNEHDQLGNETTKE------------EYHSTPVQVKGISD--V 330
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+A G ++TV + + G V+ WG YG+LG + + P +V N + I+
Sbjct: 331 KAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQV------NGISNVKAIA 384
Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
AG+ ++ G ++ W G+L N D P + +S +++ + +G H
Sbjct: 385 AGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGIS--DVKAIAAGACHTVA 442
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ D + +WG YGELG G S+ + K
Sbjct: 443 LKNDGTVWAWGCNYYGELGNGTAVDSSTPVQVK 475
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 19/259 (7%)
Query: 26 GSTCWDAVGRRKG-ALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
ST + G+ G +D N +P +++ L+ ++ ++AG AV G+ +TWG
Sbjct: 173 ASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGW--AFSAAVTKSGKIFTWG 230
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
NE+GQLG + P +V L KI GR H VTEDG+ +G GQLG
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290
Query: 144 SGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGT 199
++++ + P V +V+ +CG++FT+ L IL A G +Y QLG
Sbjct: 291 HSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGR---NQILYAFGHGEYAQLGATE 347
Query: 200 DNEY---NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ ++ ++D+ K + P+ + AL + I V CG HT+A+ VY WG+G
Sbjct: 348 ETQHLDMGSRDNHFKYS-----SPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWG 402
Query: 257 GYGRLGHREQKDEWVPRRV 275
G LG ++ + VP+ V
Sbjct: 403 SSGCLGLNSKRFQLVPQLV 421
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 47/391 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTI 103
+ P L L G I ++G H + V G Y+WGR + GQLG +K+ +P +
Sbjct: 23 LEPKVLESLKGKVIVSCSSG--EAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNL 80
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
+ L ++ K G H++ +T+ G + W GQL ++I+ S +
Sbjct: 81 IKTLLHERVVKVACGNFHSLALTDQGR--VYEW---GQL------HKIDDSKTGLEATNG 129
Query: 164 TATACGADFTVWLSSVEG--ASILNAGLPQYGQL--GHGTDNEYNTKDSSV-----KLAY 214
G + S +E + LN Y + D+E +T + S K+
Sbjct: 130 LLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIID 189
Query: 215 EAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
Q P + LA E ++ ++ G + AV G ++TWGF G+LG + + P+
Sbjct: 190 YNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ 249
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKL-KNNGDDWMYPKPL-- 325
V ++ +S G + G LY W G+L +N +++PK +
Sbjct: 250 LVKTLLDVKIVS----VSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAA 305
Query: 326 MDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQK----------SSAM 374
L+G + + G N +G + ++GH +Y +LG Q +
Sbjct: 306 FSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSS 365
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK V+ LE + V CG+ H+L + + V
Sbjct: 366 PKVVEALEDKKIKYVTCGHLHTLALTEDNEV 396
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-ACGADFTVWLSSVEGASILNAGLP 190
++ G NK+GQLG +I+ +EP + L +V + + G + +S + + G
Sbjct: 4 ISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRF--GDVYSWGRG 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ GQLG ++TK P I L E +VKVACG H++A+ +G V
Sbjct: 62 KEGQLGVPEKMLFSTK-------------PNLIKTLLHERVVKVACGNFHSLALTDQGRV 108
Query: 251 YTWG 254
Y WG
Sbjct: 109 YEWG 112
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
N + + PK L L G + SG H+ V SWG + G+LG P S
Sbjct: 18 NIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGV-PEKMLFST 76
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RLDQLD 413
P + L V+ VACG HSL + D+ V E +L ++D
Sbjct: 77 KPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKID 118
>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 172/415 (41%), Gaps = 75/415 (18%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG DG L P +L P + G + R++ C H AV +G +TWG NE GQL
Sbjct: 35 RKGK-DGQLRIPKQLPPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANEFGQL 93
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGNSLAFGWNKHGQLGSGS 146
G G + R P V +L +K G T + E DG L+ W GS
Sbjct: 94 GDGTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSRLWVWGQNQGSNY 153
Query: 147 IR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE- 202
R P+ + C VS CGA V LS E + G +YGQLG G E
Sbjct: 154 PRLFCGAFSPNTIICQVS------CGAVHVVALS--EDGLLQAWGYNEYGQLGRGFTCEG 205
Query: 203 ---YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
++ K EA P + I +V+CG HT A+ KG VYTWG G G
Sbjct: 206 LQGARVINAYAKFLDEA---PELV------KITQVSCGEYHTAAISEKGEVYTWGLGNMG 256
Query: 260 RLGHREQKD---EWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
+LGH + E +PRRV +F ++ ++ G V++ G LY WG
Sbjct: 257 QLGHTSLQSGDKELLPRRVVALDGIFIKD--------VACGGVHTCAATQKGALYAWGGG 308
Query: 312 ----------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISW 354
+ + + ++ P + + +++ + G+ H V D W
Sbjct: 309 QAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPT-DVQHVACGHSHTLVSMRDGRIHGW 367
Query: 355 GHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
G+ YG+ +KS+ P VD G V +A G GHS V+ D ++ E
Sbjct: 368 GYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKE 417
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 48/181 (26%)
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVN 296
T +V +K +Y WG+ G+ G + + + +P++ LPPE
Sbjct: 10 TKRSVNFPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQ---------LPPELF------- 53
Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
C AG ++ ++ C G H V +D S +WG
Sbjct: 54 -GCPAGANARWL-----------------------DIAC---GREHTAAVASDGSLFTWG 86
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD-RTNVGERLDQLDV 414
++G+LG G + S PKKV LE V SV+CG + I + R N G L +L V
Sbjct: 87 ANEFGQLGDGT--EDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSRLWV 144
Query: 415 Y 415
+
Sbjct: 145 W 145
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 143/340 (42%), Gaps = 64/340 (18%)
Query: 46 SPTRLRPLVGV---DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
S P+ GV D+R VAAG H V + G +T G N GQLGH +
Sbjct: 54 SSNYFHPVEGVSDLDVRAVAAG--GAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEP 111
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
++ L ++ AG HT+ V DG AFG N GQLG+G++ I P + L E
Sbjct: 112 MLVRL-DVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTI-PRKIGALAKE 169
Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V ACGA+ + L+ + + + G G LGHG++ D A+ P
Sbjct: 170 ARVAQVACGAEHS--LAVADDGRVYSWGSSTDGVLGHGSET---WNDGWFYRTARAELAP 224
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R + +L + +V VA G H+ +D +G +YTWG G + +LG
Sbjct: 225 RLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLG------------------ 266
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
+SA + T P P+M L + + G
Sbjct: 267 ---------LSAKPSDHETT---------------------PSPVMSLR--FVHEIACGG 294
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+H ++ +SWG Q+GELG+G + SA+PK + +
Sbjct: 295 LHSLANTNAGVVSWGANQHGELGHGHHSDIKSAVPKPIKM 334
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 38/252 (15%)
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
L+AG +G+LGHG+ +E + S Y + ++ + VA G H+V +
Sbjct: 28 LSAGNGDHGRLGHGSPDEAHDGWSPRSSNYF-----HPVEGVSDLDVRAVAAGGAHSVFL 82
Query: 245 DSKGYVYTWGFGGYGRLGHRE---QKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCT 300
+ G+V+T G G+LGH E + R+DV E V ++AG+ ++ C
Sbjct: 83 VAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVRLDV---------EVVSVAAGNGHTLCV 133
Query: 301 AGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSG-WNLRCMDSGNMHHF-VGADSSCIS 353
G ++ +GK L D P+ + L+ + + G H V D S
Sbjct: 134 DVDGCVWAFGKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYS 193
Query: 354 WGHAQYGELGYGP---------YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
WG + G LG+G ++ P+ V LE V++VA G+ HS I DR N
Sbjct: 194 WGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGN 253
Query: 405 VGE----RLDQL 412
+ R +QL
Sbjct: 254 LYTWGQGRFNQL 265
>gi|255083701|ref|XP_002508425.1| predicted protein [Micromonas sp. RCC299]
gi|226523702|gb|ACO69683.1| predicted protein [Micromonas sp. RCC299]
Length = 261
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
C + HC A+D +G TWG G+LGHG I+ D P V+ +S K+ + G +HT
Sbjct: 3 CGASHCAALDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGANHT 62
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
VVV+E G G +HGQLG G + + L VT G TV L+
Sbjct: 63 VVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNVTRAVAGGSHTVCLTDC-- 120
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ + G +YGQLG G D E T + V + R IV+ A G NH+
Sbjct: 121 GSVWSWGACRYGQLGLGDDWEGRTPKNGVWIKVPCACGDRC-------KIVRAAAGGNHS 173
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+ + G V T G YG+LGH + K + RV+ + + + A + G ++
Sbjct: 174 AVLTACGAVMTTGSNSYGQLGHGDIKKRYAFTRVESLRGSRL----ATVDCGEDHTGAVG 229
Query: 302 GGGQLYMWGK 311
G+LY+WG+
Sbjct: 230 DSGRLYLWGR 239
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 183 SILNAGLPQYGQLGHG--TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+++ GL G+LGHG T E + PR + +++G + ++A G NH
Sbjct: 16 ALMTWGLASSGELGHGGWTPIEVDI--------------PRRVNSMSGVKVTQIATGANH 61
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
TV V G ++T G G +G+LGH D +R++ + NV AV AG ++ C
Sbjct: 62 TVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNV--TRAV--AGGSHTVCL 117
Query: 301 AGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGW------------NLRCMDSGNMHHF 344
G ++ WG + GDDW P + W +R GN
Sbjct: 118 TDCGSVWSWGACRYGQLGLGDDWEGRTPKNGV--WIKVPCACGDRCKIVRAAAGGNHSAV 175
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ A + ++ G YG+LG+G ++ + +V+ L G + +V CG H+ + D
Sbjct: 176 LTACGAVMTTGSNSYGQLGHGDIKKRYAF--TRVESLRGSRLATVDCGEDHTGAVGD 230
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--IS 291
V+CG +H A+D G + TWG G LGH W P VD+ +R N + V I+
Sbjct: 1 VSCGASHCAALDPDGALMTWGLASSGELGH----GGWTPIEVDIPRRVNSMSGVKVTQIA 56
Query: 292 AGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ ++ + GG L+ G+ ++ + +D + L L G N+ +G H
Sbjct: 57 TGANHTVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNVTRAVAGGSHTVC 116
Query: 346 GADS-SCISWGHAQYGELGYG 365
D S SWG +YG+LG G
Sbjct: 117 LTDCGSVWSWGACRYGQLGLG 137
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + G T G N GQLGHGD +R T V L ++ G HT V +
Sbjct: 172 HSAVLTACGAVMTTGSNSYGQLGHGDIKKRYAFTRVESLRGSRLATVDCGEDHTGAVGDS 231
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
G +G GQLGSG R+ P+PV
Sbjct: 232 GRLYLWGRGDWGQLGSGDGRSHWSPAPV 259
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 134/343 (39%), Gaps = 65/343 (18%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R A C H V GR YT+G N+ GQLG G +P+ V L K K G
Sbjct: 36 RICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACG 95
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RSHT++ T DG +G GQLG G E + S+ + +CG T ++
Sbjct: 96 RSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAISVSCGYYHTAVVT- 154
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E ++ G +YG+LG N D ++ P+ + + E + V CG
Sbjct: 155 -EDGNLYTFGETEYGKLG------LNNSD------LDSSDTPQKVTGIK-EKVKFVVCGG 200
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT A+ G VYT+G G G+LGH + P RV+ F+ A ++
Sbjct: 201 GHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFR-----------DADCKHA 249
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
SC G N + +G H + ++G
Sbjct: 250 SC------------------------------GENFTAVITGKGHLY--------TFGDG 271
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
++G+LG G + P KV V VACG H +VI
Sbjct: 272 RHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIA 314
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 24/242 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVS 105
P+ ++ L + VA C H + +G+ Y WG GQLG G D + PT++
Sbjct: 78 PSCVKSLKHEKAKLVA--CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLD 135
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLVSEV 163
SK G HT VVTEDGN FG ++G+LG + + + P V + +V
Sbjct: 136 FDSK--AISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKV 193
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG T ++ E ++ G GQLGHG + P P +
Sbjct: 194 KFVVCGGGHTTAIA--ESGAVYTFGNGASGQLGHGN-------------SLLESPTPHRV 238
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRN 281
+CG N T + KG++YT+G G +G+LG ++ +++ P +V F +
Sbjct: 239 ERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKF 298
Query: 282 NV 283
V
Sbjct: 299 QV 300
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
I VACG HT V G +YT+G +G+LG K P V + ++
Sbjct: 37 ICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKA----KLV 92
Query: 291 SAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKP-LMDLSGWNLRCMDSGNMHH- 343
+ G ++ G G++Y+W G+L D +P L+D + + G H
Sbjct: 93 ACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHTA 151
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V D + ++G +YG+LG SS P+KV ++ V V CG GH+ I +
Sbjct: 152 VVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAE 208
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P +++ L G DI+ A G H +A+ EG+ Y+WG+N +LG+ Q P I+
Sbjct: 65 LYPKKIKELCGKDIKTFAYG-KGPHVLALTKEGKVYSWGQNCHYELGNTFGSQALTPAII 123
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--- 161
+ L I G H++ +T DG A+G N GQ+G I ++ P + +
Sbjct: 124 TNLCNEFIVDVACGSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTG 183
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+V +CG F+V +++ + + G GQLG +N Q P
Sbjct: 184 KKVICISCGDSFSVVVTN--NGEVYSWGRNDVGQLGIENNN-------------NDQFHP 228
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE---QKDEWVPRRVDV 277
I AL I KV CG+ HT+A+ +G +Y WG YG+LG + W P +++V
Sbjct: 229 CRITALTKVVIEKVVCGSIHTLALSDEGVLYVWGANNYGQLGLTTVLLNTNIWKPTKLEV 288
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ VL + S + S G +++MWG+
Sbjct: 289 PEMRRVL--DIATSYYNYISIALCEGNRIFMWGQ 320
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
++VT D A G N G LG+G ++ + P ++ L CG D + +G
Sbjct: 37 LIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKKIKEL--------CGKDIKTFAYG-KGP 87
Query: 183 SILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+L L + G++ G E S L P I L E IV VACG++
Sbjct: 88 HVL--ALTKEGKVYSWGQNCHYELGNTFGSQALT------PAIITNLCNEFIVDVACGSH 139
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
H++A+ + G VY WG G++G + + +PR++ N L + V IS G
Sbjct: 140 HSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKL-----NFTLTGKKVICISCGDS 194
Query: 296 NSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
S G++Y WG+ ++NN +D +P + L+ + + G++H +D
Sbjct: 195 FSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSD 254
Query: 349 SSCIS-WGHAQYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHSLVI 399
+ WG YG+LG ++ P K+++ E V+ +A Y + + I
Sbjct: 255 EGVLYVWGANNYGQLGLTTVLLNTNIWKPTKLEVPEMRRVLDIATSYYNYISI 307
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 22/235 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
Y G N G LG GD P + EL IK G+ H + +T++G ++G N
Sbjct: 46 YAVGSNTSGCLGTGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTKEGKVYSWGQNC 105
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
H +LG+ + P+ + L +E + ACG+ ++ L+ N G + G
Sbjct: 106 HYELGNTFGSQALTPAIITNLCNEFIVDVACGSHHSLALT--------NDG--EVYAWGQ 155
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
T + D + + Q PR + L G+ ++ ++CG + +V V + G VY+WG
Sbjct: 156 NTSGQVGCHDITTLV----QDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGRN 211
Query: 257 GYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G+LG D++ P R+ + + E V+ GS+++ + G LY+WG
Sbjct: 212 DVGQLGIENNNNDQFHPCRITALTK---VVIEKVV-CGSIHTLALSDEGVLYVWG 262
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L G ++ A G H +A+ EG+ Y+WG N+ +LG+ + PT+V
Sbjct: 68 IYPKKIEALCGKSVKTFAYG-KGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLV 126
Query: 105 -SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--- 160
S L + G H++ +T G A+G N GQ+G G+I + ++P P V
Sbjct: 127 PSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLN 186
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V +CG +V + + + + G GQLG G +Q
Sbjct: 187 GKKVVHISCGDSSSV--AVTDSGEVYSWGHNGVGQLGLGNCT--------------SQVE 230
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ +A A I KV CG HT+A+ +G +Y WG YG+LG + W+P +++V +
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPE 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+L + V S S + G +++MWG+
Sbjct: 291 MGRIL--DIVTSHYHHISLAMSEGNRIFMWGQ 320
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 31/293 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G + T++VT+D G N +G LG+G ++ I P + L + T
Sbjct: 33 GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHV 92
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKV 234
L+ E + + G Y +LG+ + NE T P + + L + +V +
Sbjct: 93 LALTEEGKVYSWGYNDYCELGNKSTNEGLT--------------PTLVPSVLDDKFVVDI 138
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKDEWVPRRVDV-FQRNNVLPPEAVIS 291
ACG +H++A+ +KG +Y WG G++ G + +P+ ++V V+ IS
Sbjct: 139 ACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVH----IS 194
Query: 292 AGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G +S G++Y WG N + P+ + + + + G MH
Sbjct: 195 CGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLA 254
Query: 346 GADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+D + WG YG+LG + +P K+++ E ++ + + H +
Sbjct: 255 LSDEGVLYVWGANSYGQLGLNT--DSNVWIPTKLEVPEMGRILDIVTSHYHHI 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
++ P+ I AL G+++ A G H +A+ +G VY+WG+ Y LG++ + P
Sbjct: 65 QSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPT 124
Query: 274 RVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKP 324
V +VL + V I+ G +S G++Y WG +G + P P
Sbjct: 125 LVP-----SVLDDKFVVDIACGGHHSLALTNKGEIYAWGH-NVSGQVGCGTILSTVQPIP 178
Query: 325 LMDLSGWN------LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+ G N + C DS ++ V SWGH G+LG G S P+KV
Sbjct: 179 KLLNVGLNGKKVVHISCGDSSSVA--VTDSGEVYSWGHNGVGQLGLG--NCTSQVEPQKV 234
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPK 436
+ + V CGY H+L + D L V+ + Q D N +P K
Sbjct: 235 ATFAKIVIEKVVCGYMHTLALSDE-------GVLYVWGANSYGQLGLNTDSNVWIPTK 285
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 163/344 (47%), Gaps = 44/344 (12%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H VA+ G +TWG N GQLG+G Q PT + +S + AG +HTV ++
Sbjct: 508 SAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS--GVIDVAAGVNHTVALS 565
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
DG A+G+N +GQLG+G+ N++ P V L VTA + G+ TV L + ++
Sbjct: 566 ADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL-DGVTAISAGSTHTVALKA--DGTVWA 622
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G YGQLG GT + + P + +L E +V +A G HTVAV
Sbjct: 623 WGSNLYGQLGDGT--------------FTHRSSPVQVPSL--ENVVSIAAGHFHTVAVKG 666
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G ++ WG+G G+LG ++ VP +V + L I+AG ++ GQ+
Sbjct: 667 DGTLWVWGYGPQGQLGLGTTTNQSVPVQV------SGLGHAVAIAAGGYHTVALLANGQV 720
Query: 307 YMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGE 361
+ WG + GD + + P++ N+ + +G V D + ++G+ G+
Sbjct: 721 WTWGYNSSGQLGDATIIQRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780
Query: 362 LGYGPYGQKSS----AMPKKVDILEGM-HVISV-------ACGY 393
LG G +SS M VD+ G+ H++ + ACGY
Sbjct: 781 LGDGTTTSRSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGY 824
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 101/417 (24%)
Query: 49 RLRPLVG---VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
RLRP++ +R ++ G V H VA+ +G + WG N GQLG+G P V+
Sbjct: 335 RLRPVLVAGLTGVRALSGGVV--HTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVA 392
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP------------ 153
L++ + AG HT+ +DG A+G N +G LG+G+ + P
Sbjct: 393 ALTQ--AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFG 450
Query: 154 -----------------------------------------SPVRCLVSEVTATACGADF 172
SP +VS + TA G+
Sbjct: 451 AGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAH 510
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+V L + G ++ G YGQLG+GT + T + ++G ++
Sbjct: 511 SVALGA--GGAVWTWGYNAYGQLGNGTTTQVVTP--------------TQLPGMSG--VI 552
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----A 288
VA G NHTVA+ + G V WG+ YG+LG+ ++ P+ V PE
Sbjct: 553 DVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSV----------PELDGVT 602
Query: 289 VISAGSVNSSCTAGGGQLYMWG-KLKNNGDDWMYP---KPLMDLSGWNLRCMDSGNMHHF 344
ISAGS ++ G ++ WG L D + P+ S N+ + +G+ H
Sbjct: 603 AISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTV 662
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V D + WG+ G+LG G +S +P +V L H +++A G H++ ++
Sbjct: 663 AVKGDGTLWVWGYGPQGQLGLGTTTNQS--VPVQVSGLG--HAVAIAAGGYHTVALL 715
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PTR+R L + V+A + H VAV +G +TWG N GQLG G R P V
Sbjct: 187 APTRVRGL----NQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVP 242
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+S + A S TV + DG +G N G+LG G+ + + P V L S VT
Sbjct: 243 GMS--DVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNL-SGVTN 299
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T L+ + S + G YGQLG GT + RP +A
Sbjct: 300 IAAGLWHT--LAVKKDGSAWSWGNNAYGQLGDGTTLN--------------RLRPVLVAG 343
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G + ++ G HTVA+ G + WG+ G+LG+ + +P +V
Sbjct: 344 LTG--VRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALT------ 395
Query: 286 PEAV-ISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPL-MDLSGWNLRCMDSG 339
+AV I AG ++ G LY WG G+ P+ + LSG +R +G
Sbjct: 396 -QAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSG--VRWFGAG 452
Query: 340 NMHHF-------VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ + + +WGH GELG G Q++S P V ++ G ++ A G
Sbjct: 453 YYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTS--PTAV-VVSG--IVKTAGG 507
Query: 393 YGHSLVI 399
HS+ +
Sbjct: 508 SAHSVAL 514
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 137/318 (43%), Gaps = 36/318 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + V G + WG N GQLG+G + QR+ PT V L+ ++ A AG H+V VTED
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEHSVAVTED 213
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNA 187
G+ +G N +GQLG G+ N + PV+ +S+V A A TV L + ++
Sbjct: 214 GSVWTWGSNAYGQLGDGT--NTLRAVPVQVPGMSDVVAVAAAGSRTVALKA--DGTVWTW 269
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G+ G+LG GT P + L+G T +A G HT+AV
Sbjct: 270 GINSSGELGDGTTTH--------------SLLPIQVPNLSGVT--NIAAGLWHTLAVKKD 313
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G ++WG YG+LG + P V L S G V++ G +
Sbjct: 314 GSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRAL------SGGVVHTVALKWDGTAW 367
Query: 308 MWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGEL 362
WG NG P+ + +D+G H D + +WG YG L
Sbjct: 368 GWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGAL 427
Query: 363 GYGPYGQKSSAMPKKVDI 380
G G SS++P +V +
Sbjct: 428 GTG--NTTSSSVPVQVPL 443
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA H VA+ G+ +TWG N GQLG IQR P +V L+ + AG
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT--NVIALAAGGY 759
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
T V+ DG AFG+N +GQLG G+ + SP L++ V + G + + L +
Sbjct: 760 TTAVLKRDGTVWAFGYNPNGQLGDGTTTS--RSSPTATLMNSVVDLSSGVNHMMGLR--K 815
Query: 181 GASILNAGLPQYGQLGHGTDNE 202
A + G GQLG GT +
Sbjct: 816 DAWVRACGYNSAGQLGDGTTTQ 837
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 38/287 (13%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G HT+ V G+ A+G N GQLG+G P+ VR L ++V + + GA+ +V +
Sbjct: 153 GVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL-NQVVSASAGAEHSV--A 209
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
E S+ G YGQLG GT+ + P + ++ +V VA
Sbjct: 210 VTEDGSVWTWGSNAYGQLGDGTNT--------------LRAVPVQVPGMS--DVVAVAAA 253
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+ TVA+ + G V+TWG G LG +P +V L I+AG ++
Sbjct: 254 GSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVP------NLSGVTNIAAGLWHT 307
Query: 298 SCTAGGGQLYMWGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
G + WG GD + + P + L+G +R + G +H + D +
Sbjct: 308 LAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTG--VRALSGGVVHTVALKWDGT 365
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
WG+ G+LG G +S++P +V L + + G H+L
Sbjct: 366 AWGWGYNSAGQLGNGT--TTNSSIPVQVAALT--QAVEIDAGGYHTL 408
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
V+ G HT+ V S G ++ WG G+LG+ ++ P RV N V+ SA
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVSA----SA 202
Query: 293 GSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVG 346
G+ +S G ++ WG +G + + P + + G + + +G+ +
Sbjct: 203 GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVP-VQVPGMSDVVAVAAAGSRTVALK 261
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
AD + +WG GELG G S +P +V L G V ++A G H+L +
Sbjct: 262 ADGTVWTWGINSSGELGDGT--TTHSLLPIQVPNLSG--VTNIAAGLWHTLAV 310
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 37/335 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG G+LG G I+ ++ + E+ +++A G SHT+++T+DG + G
Sbjct: 4 YCWGNTVHGELGLGG-IEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 137 NKHGQLGSGS--IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
N HGQLG + + N+ P + L + VT +CG ++ L++ + + G G
Sbjct: 63 NDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTN--WGQVFSWGSNSIG 119
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLGH TD + T PR I +A +T+V++A G H++A+ + G +++W
Sbjct: 120 QLGHDTDLQTYTT-------------PRMIKTIATKTVVQIASGQFHSLALTNSGELFSW 166
Query: 254 GFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
G GYG+LG ++ V P V ++ P A I+ G +S + G ++ WGK
Sbjct: 167 GANGYGQLGLGTTGEKVVTPTLV----KSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKN 222
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYG 365
N+ +P+ L L +R + G + F+ + + G +G+LG+G
Sbjct: 223 TFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHG 282
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + +ACG H+L V
Sbjct: 283 TCSNE--ILPRMVFELMGSKITQIACGRRHTLAFV 315
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 23/261 (8%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G+L CG+ +G L P + L + V+ G + H +A+ G
Sbjct: 53 KDGKLFSCGNNDHGQLGHDTDCLPNK--RPQFISSLENYIVTHVSCG--TTHSLALTNWG 108
Query: 78 RCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ ++WG N GQLGH +Q P ++ ++ + + +G+ H++ +T G ++G
Sbjct: 109 QVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGA 168
Query: 137 NKHGQLGSGSI-RNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N +GQLG G+ + P+ V+ L + ACG + + +S + +I G +GQ
Sbjct: 169 NGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVS--KSGAIFGWGKNTFGQ 226
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG + V + P+ + L + ++CG + + + +G V+T G
Sbjct: 227 LG---------LNDLVSRCF-----PQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCG 272
Query: 255 FGGYGRLGHREQKDEWVPRRV 275
G +G+LGH +E +PR V
Sbjct: 273 AGTFGQLGHGTCSNEILPRMV 293
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL G+ + +G G +V+PT ++ L G+ I F+A G H AV G
Sbjct: 161 GELFSWGANGYGQLGL--GTTGEKVVTPTLVKSLAGIPIAFIACG--GNHSFAVSKSGAI 216
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D + R P + L ++ G + +T++G G
Sbjct: 217 FGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTF 276
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
GQLG G+ NEI P V L+ S++T ACG
Sbjct: 277 GQLGHGTCSNEILPRMVFELMGSKITQIACG 307
>gi|348504160|ref|XP_003439630.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Oreochromis niloticus]
Length = 1369
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G+ YTWG++ RGQLG G + R P V LS + + AG + ++ G ++G
Sbjct: 631 GQLYTWGQDCRGQLGLGTRKSVCRSPQHVPSLSAIPLIQVAAGGDQSFALSVSGGVFSWG 690
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA------SILNAG 188
N GQLG G ++ P+PV+CL + + +CG D T L+ G ++ G
Sbjct: 691 RNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISCGQDHTAILTKSSGXXXXXXXAVFTFG 750
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
Q+GQLGH + + RPR +A L G + K+ CG NHT+A+
Sbjct: 751 SGQHGQLGHN--------------SLRNELRPRLVAELWGAKVTKITCGRNHTLALTESK 796
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
VY++G G+LGHRE+ + VP V + Q + L
Sbjct: 797 QVYSFGCEDQGQLGHREESNPSVPLPVRLPQETSEL 832
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 91/194 (46%), Gaps = 15/194 (7%)
Query: 13 ETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
E+GK G+L G C +G G SP + L + + VAAG A
Sbjct: 624 ESGKVLYGQLYTWGQDCRGQLGL--GTRKSVCRSPQHVPSLSAIPLIQVAAG--GDQSFA 679
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS- 131
+ V G ++WGRN+ GQLG GD R P V L+ K + G+ HT ++T+
Sbjct: 680 LSVSGGVFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISCGQDHTAILTKSSGXX 739
Query: 132 -------LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
FG +HGQLG S+RNE+ P V L ++VT CG + T+ L+ E
Sbjct: 740 XXXXXAVFTFGSGQHGQLGHNSLRNELRPRLVAELWGAKVTKITCGRNHTLALT--ESKQ 797
Query: 184 ILNAGLPQYGQLGH 197
+ + G GQLGH
Sbjct: 798 VYSFGCEDQGQLGH 811
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 113/303 (37%), Gaps = 72/303 (23%)
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWN--KHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ I AGR+ V +GN+ N K G+ G R + ++ A +
Sbjct: 561 HHIADLSAGRNVLAFVKSNGNAFIIRTNESKDGRRARG--RQKFVKHK-----EKIEAVS 613
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQ-----LGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
CG D LS E +L L +GQ LG GT + S + P+
Sbjct: 614 CGDDVVALLS--ESGKVLYGQLYTWGQDCRGQLGLGT------RKSVCR-------SPQH 658
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ +L+ +++VA G + + A+ G V++WG G+LG + KD P
Sbjct: 659 VPSLSAIPLIQVAAGGDQSFALSVSGGVFSWGRNDCGQLGLGDTKDRHTPA--------- 709
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
P + + + + SC GQ + K++G
Sbjct: 710 --PVQCLNMKKAQHISC----GQDHTAILTKSSGXX------------------------ 739
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ ++G Q+G+LG+ ++ P+ V L G V + CG H+L + +
Sbjct: 740 --XXXXXAVFTFGSGQHGQLGHN--SLRNELRPRLVAELWGAKVTKITCGRNHTLALTES 795
Query: 403 TNV 405
V
Sbjct: 796 KQV 798
>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii VEG]
Length = 1015
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 48/297 (16%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ SP + L ++ V+AG + VA G Y WG N GQLG GD+ P +
Sbjct: 121 MASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPRL 178
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSIR 148
V L +K + HTV +DG++ A+G +G+LG S +
Sbjct: 179 VKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATG 238
Query: 149 NEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQL 195
EP C V + ACG + +L E S+ GL G+L
Sbjct: 239 ARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRL 298
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG + + + P A+ AL I +ACG +HT V S G +YTWG
Sbjct: 299 GHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 344
Query: 256 GGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+G+LG + + +P+ V RN + ++ GS +S+C G+LY WG+
Sbjct: 345 AAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQ 398
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD------ 99
P ++ L G ++ VA C H V +G Y WG G+LG HG I
Sbjct: 176 PRLVKALHGKVVKAVA--CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVF 233
Query: 100 ------------------RPTIVSELSKYKIKKAGAGRSHTV---VVTEDGNSL-AFGWN 137
P ++ L Y I G H+ + +D SL G
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+G+LG G + P+ V L + +TA ACGA T ++S ++ G +G+LG
Sbjct: 294 LNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSA--GTLYTWGGAAFGKLG 351
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G+ T+ S + + + P L + +V VA G+ H+ V + G +YTWG G
Sbjct: 352 LGS-----TRGSQLLPKHVSGP-------LRNKAVVSVALGSQHSACVTTDGELYTWGQG 399
Query: 257 GYGRL 261
G L
Sbjct: 400 RRGNL 404
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR--CYTWGRNERGQLGHGDKIQRDRP 101
+ +P L L G I VA G + + + R +T G G+LGHGD+ R P
Sbjct: 250 VCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLP 309
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLV 160
T V L I G HT VT G +G G+LG GS R +++ P V +
Sbjct: 310 TAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPL 369
Query: 161 SEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEY---------------- 203
A +V L S A + G L +GQ G +
Sbjct: 370 RN------KAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTS 423
Query: 204 ----NTKDSSVKLAY-----EAQP-RPRAIAALAGETIVKVACGTNHTVAV 244
T +S K E P RP + AL G+ +V+++C + TVA
Sbjct: 424 FAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 83/224 (37%), Gaps = 44/224 (19%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E PR + AL +V+ G V G +Y WG G+LG +++D VPR
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRL 178
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY------------- 321
V V ++ ++ C G Y WG NG ++
Sbjct: 179 VKALHGKVV----KAVACSQEHTVCCLDDGSAYAWG-CALNGRLGLHGLSIPSSAGLGVF 233
Query: 322 -------PKPLM------------DLSGWNLRCMDSGNMHH-FVGA----DSSCISWGHA 357
P+PL L G+ + + G H F+G +S + G
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G LG+G ++ +P V LE +++ ++ACG H+ +
Sbjct: 294 LNGRLGHG--DEEDRHLPTAVHALENVNITAIACGAHHTACVTS 335
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 63/168 (37%), Gaps = 38/168 (22%)
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPL 325
PR VD + N +SAG + + A G+LYMWG GD D P+ +
Sbjct: 124 PRLVDALKNIN----SERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLV 179
Query: 326 MDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSA----------- 373
L G ++ + H D S +WG A G LG SSA
Sbjct: 180 KALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGA 239
Query: 374 ------------MPKKVDILEGMHVISVACGYGHSLVI----VDRTNV 405
P+ ++ L G + VACG HS + DRT++
Sbjct: 240 RPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSL 287
>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii GT1]
Length = 1020
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 48/297 (16%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ SP + L ++ V+AG + VA G Y WG N GQLG GD+ P +
Sbjct: 121 MASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPRL 178
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSIR 148
V L +K + HTV +DG++ A+G +G+LG S +
Sbjct: 179 VKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATG 238
Query: 149 NEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQL 195
EP C V + ACG + +L E S+ GL G+L
Sbjct: 239 ARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRL 298
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG + + + P A+ AL I +ACG +HT V S G +YTWG
Sbjct: 299 GHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 344
Query: 256 GGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+G+LG + + +P+ V RN + ++ GS +S+C G+LY WG+
Sbjct: 345 AAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQ 398
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD------ 99
P ++ L G ++ VA C H V +G Y WG G+LG HG I
Sbjct: 176 PRLVKALHGKVVKAVA--CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVF 233
Query: 100 ------------------RPTIVSELSKYKIKKAGAGRSHTV---VVTEDGNSL-AFGWN 137
P ++ L Y I G H+ + +D SL G
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+G+LG G + P+ V L + +TA ACGA T ++S ++ G +G+LG
Sbjct: 294 LNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSA--GTLYTWGGAAFGKLG 351
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G+ T+ S + + + P L + +V VA G+ H+ V + G +YTWG G
Sbjct: 352 LGS-----TRGSQLLPKHVSGP-------LRNKAVVSVALGSQHSACVTTDGELYTWGQG 399
Query: 257 GYGRL 261
G L
Sbjct: 400 RRGNL 404
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR--CYTWGRNERGQLGHGDKIQRDRP 101
+ +P L L G I VA G + + + R +T G G+LGHGD+ R P
Sbjct: 250 VCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLP 309
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLV 160
T V L I G HT VT G +G G+LG GS R +++ P V +
Sbjct: 310 TAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPL 369
Query: 161 SEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEY---------------- 203
A +V L S A + G L +GQ G +
Sbjct: 370 RNK------AVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTS 423
Query: 204 ----NTKDSSVKLAY-----EAQP-RPRAIAALAGETIVKVACGTNHTVAV 244
T +S K E P RP + AL G+ +V+++C + TVA
Sbjct: 424 FAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 83/224 (37%), Gaps = 44/224 (19%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E PR + AL +V+ G V G +Y WG G+LG +++D VPR
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRL 178
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY------------- 321
V V ++ ++ C G Y WG NG ++
Sbjct: 179 VKALHGKVV----KAVACSQEHTVCCLDDGSAYAWG-CALNGRLGLHGLSIPSSAGLGVF 233
Query: 322 -------PKPLM------------DLSGWNLRCMDSGNMHH-FVGA----DSSCISWGHA 357
P+PL L G+ + + G H F+G +S + G
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G LG+G ++ +P V LE +++ ++ACG H+ +
Sbjct: 294 LNGRLGHG--DEEDRHLPTAVHALENVNITAIACGAHHTACVTS 335
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 63/168 (37%), Gaps = 38/168 (22%)
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPL 325
PR VD + N +SAG + + A G+LYMWG GD D P+ +
Sbjct: 124 PRLVDALKNIN----SERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLV 179
Query: 326 MDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSA----------- 373
L G ++ + H D S +WG A G LG SSA
Sbjct: 180 KALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGA 239
Query: 374 ------------MPKKVDILEGMHVISVACGYGHSLVI----VDRTNV 405
P+ ++ L G + VACG HS + DRT++
Sbjct: 240 RPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSL 287
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 164/404 (40%), Gaps = 57/404 (14%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R +A C H A+ +G +TWG N+ GQLG G + DRP V L +K
Sbjct: 46 LRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVAC 105
Query: 118 GRSHTVVVTE--DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G + T + + DG W GS S R +V +V ACG
Sbjct: 106 GANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSGAFSSSTVVIQV---ACGGAHAAA 162
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNE----YNTKDSSVKLAYEAQPRPRAIAALAGETI 231
LS E + G ++GQLG G E S VK E + +
Sbjct: 163 LS--EHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVK---------V 211
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPEA 288
+V CG HT A+ G VYTWG G G+LGHR + E +PRRV + +V+
Sbjct: 212 KQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVLPRRVVTLEGVDVVQ--- 268
Query: 289 VISAGSVNSSCTAGGGQLYMWG--------------KLKNNGD-DWMYPKPLMDLSGWNL 333
ISAG V+S + G LYMWG ++ + D D+ + + + +
Sbjct: 269 -ISAGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGSSDIDFFFQRIPVLVIPSGA 327
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------MPKKVDILEGMHVI 387
R G++H V + + GY YGQ S P +D G +
Sbjct: 328 RSATCGDLHTLV-------RMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVG-EIT 379
Query: 388 SVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNS 431
+A G GHS V+ +N+ E + +L + D +S + D S
Sbjct: 380 CLAAGGGHSAVLTQASNLKE-ICELKLVDYVTASTASTIADIAS 422
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 148/335 (44%), Gaps = 56/335 (16%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L GV VA S + +A+ +G + WG N GQLG G R P V
Sbjct: 59 TPVPVQNLTGV----VAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQ 114
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT- 164
L+ AG G H++ + DG A+G+N +GQLG G+I N P V+ L V
Sbjct: 115 NLTGVVAIAAGGG--HSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAV 172
Query: 165 ------ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQ 217
+ A +D TVW G YGQLG GT N Y
Sbjct: 173 AAGGGHSLALKSDGTVWAWGYNG----------YGQLGDGTTMNRYT------------- 209
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + L G +V +A G++H++A+ S G V+ WG GYG+LG + P RV
Sbjct: 210 --PVQVQNLTG--VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQG 265
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLSGW 331
I+AG+ +S G ++ W G+L + Y P + +L+G
Sbjct: 266 LTD------VVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNLTG- 318
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ + +G H + +D + +WG+ +GELG G
Sbjct: 319 -VVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDG 352
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P +++ L GV VA S H +A+ +G + WG N GQLG G R P
Sbjct: 206 NRYTPVQVQNLTGV----VAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPV 261
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L+ + AG H++ + DG +GWN GQLG G+ N P V+ L +
Sbjct: 262 RVQGLTD--VVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNL-TG 318
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT--KDSSVKLAYEAQP-- 218
V A A G ++ L S ++ G +G+LG GT + +T + S + L + P
Sbjct: 319 VVAIAAGGGHSLALKS--DGTVWAWGNNDWGELGDGTRTDRHTPVQVSGLNLGQQTTPDT 376
Query: 219 ---RPRAIAALAGET 230
P +++ +AG+T
Sbjct: 377 LLVSPASLSIIAGQT 391
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 101/349 (28%), Positives = 157/349 (44%), Gaps = 44/349 (12%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIV-------SELSKYKIKKAGAGRSHTVVVTEDGNSL 132
Y WG N +GQLG+G ++V L+ + H++ + DG
Sbjct: 135 YAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASDGTVY 194
Query: 133 AFGWNKHGQLGSGS--IRNEIEPSPVRCLVSEV------TATACGADFTVWLSSVEGASI 184
A+G+N +GQLG+GS + +I PV ++ V A A G + ++ L+S +
Sbjct: 195 AWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALAS--DGIV 252
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G GQLG G+ T DS V +A + L G+T+V +A G NH++AV
Sbjct: 253 YAWGDNSEGQLGDGS-----TTDSKVPMAVDRT------GVLTGKTVVAIAAGRNHSLAV 301
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S G VY WG Y +LG D VP VD+ + A ++ G +S A G
Sbjct: 302 ASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAG--KSVADVAGGDRHSLAQASDG 359
Query: 305 QLYMWGKLKNN--GDDWMYPKPL-------MDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
+Y WG N GD + KP L+G + + +G H+ + +D + +W
Sbjct: 360 TVYAWGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCTW 419
Query: 355 GHAQYGELGYGPYGQ-KSSAMPKKVD---ILEGMHVISVACGYGHSLVI 399
G+ G+LG G + S +P V+ L G +++V G HSL +
Sbjct: 420 GYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLAL 468
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 78/281 (27%), Positives = 117/281 (41%), Gaps = 37/281 (13%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--SELSKY 110
L G + +AAG H +AV +G Y WG N QLG G P V +EL+
Sbjct: 283 LTGKTVVAIAAG--RNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGK 340
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE------VT 164
+ G H++ DG A+G N +GQ+G ++P+PV +
Sbjct: 341 SVADVAGGDRHSLAQASDGTVYAWGDNTNGQMGD--TIAHLKPAPVSVTGGSALAGKTIV 398
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G + L+S ++ G GQLG+ + + S+V +A +
Sbjct: 399 AVAAGGYHNLALAS--DGTVCTWGYNYNGQLGNNSSGA--GEKSTVPIAVNS------YG 448
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------- 276
AL G+TIV V G +H++A+ S G + TWGF G+LG + VP V
Sbjct: 449 ALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNSTTNRTVPVTVSAGGLMFQA 508
Query: 277 -------VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ P I+A S + T GG + + G
Sbjct: 509 LGTTCDAVYSLALATVPPPTITAVSPSRGLTTGGASVVITG 549
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 37/318 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTI------VSELSKYKIKKAGAGRSH 121
H +A+ +G Y WG N GQLG+G + D + L+ I G H
Sbjct: 183 HSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEH 242
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSV 179
++ + DG A+G N GQLG GS + P V +++ T A A L+
Sbjct: 243 SLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVA 302
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G Y QLG G+ DSSV P P + LAG+++ VA G
Sbjct: 303 SDGTVYAWGDNYYAQLGDGS-----LTDSSV-------PVPVDLTELAGKSVADVAGGDR 350
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSS 298
H++A S G VY WG G++G + P V V + + V ++AG ++
Sbjct: 351 HSLAQASDGTVYAWGDNTNGQMG--DTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNL 408
Query: 299 CTAGGGQLYMW-----GKLKNN----GDDWMYPKPLMD---LSGWNLRCMDSGNMHHF-V 345
A G + W G+L NN G+ P + L G + + +G H +
Sbjct: 409 ALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLAL 468
Query: 346 GADSSCISWGHAQYGELG 363
+D + +WG G+LG
Sbjct: 469 ASDGALCTWGFNSQGQLG 486
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 136/316 (43%), Gaps = 36/316 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS--PVRCLVSEV----TA 165
+ A AG + V S A+G N GQLG+G+ + S PV S V T
Sbjct: 115 VAGAFAGGQRYLRVPPGTVSYAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTL 174
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A + L+ ++ G GQLG+G+ +T S V +A +
Sbjct: 175 VALATSYRHSLALASDGTVYAWGYNANGQLGNGSGG-LSTDISKVPVAVDMT------GV 227
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG+TI+ +A G H++A+ S G VY WG G+LG D VP VD R VL
Sbjct: 228 LAGKTIIAIATGYEHSLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVD---RTGVLT 284
Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWMYPKP--LMDLSGWNLRC 335
+ V I+AG +S A G +Y WG GD D P P L +L+G ++
Sbjct: 285 GKTVVAIAAGRNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVAD 344
Query: 336 MDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI-----LEGMHVISV 389
+ G+ H A D + +WG G++G + P V + L G +++V
Sbjct: 345 VAGGDRHSLAQASDGTVYAWGDNTNGQMG----DTIAHLKPAPVSVTGGSALAGKTIVAV 400
Query: 390 ACGYGHSLVIVDRTNV 405
A G H+L + V
Sbjct: 401 AAGGYHNLALASDGTV 416
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 21/234 (8%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WGRN+ GQLG G P + IK AG HT VTEDG +GW ++G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 142 LGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG G + + P V + + + ACG T+ +SS+ G + G +YGQLGHG
Sbjct: 61 LGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHGD- 117
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+E + P + AL G+ I +++ G HT+A+ + G +Y WG+ +G+
Sbjct: 118 -------------FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQ 164
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+G + D P ++ Q V+ IS G ++ ++ WG+ N
Sbjct: 165 VGAGDNIDHCSPIQIKFPQDQKVIQ----ISCGWRHTLAVTDKQNVFSWGRGTN 214
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 20/242 (8%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + +LV P +++ G+ I+ VAAG + H AV +G + WG G LG GD+
Sbjct: 12 GTTEDSLV-PQKIQAFEGISIKMVAAG--AEHTAAVTEDGELFGWGWGRYGNLGLGDRND 68
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P VS + K+ G HT+ V+ G +GW+K+GQLG G + + P +
Sbjct: 69 RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLE 128
Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L + ++ + G T+ L++ + G ++GQ+G G + ++ +
Sbjct: 129 ALRGDNISQISGGWRHTMALTT--DGKLYGWGWNKFGQVGAGDNIDHCS----------- 175
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I + +++++CG HT+AV K V++WG G G+LGH E D P ++
Sbjct: 176 ---PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILE 232
Query: 277 VF 278
Sbjct: 233 AL 234
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 68/273 (24%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQY 192
+G N++GQLG G+ + + P ++ + A GA+ T + E + G +Y
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTA--AVTEDGELFGWGWGRY 58
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G LG G N+ +L P+ ++++ G+ +V VACG HT++V S G +YT
Sbjct: 59 GNLGLGDRND--------RLV------PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 104
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
+G+ YG+LGH + +D VP R++ + +N+ + IS G ++ G+LY W
Sbjct: 105 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNI----SQISGGWRHTMALTTDGKLYGW--- 157
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS 372
GWN ++G++G G S
Sbjct: 158 -----------------GWN-------------------------KFGQVGAGDNIDHCS 175
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
P ++ + VI ++CG+ H+L + D+ NV
Sbjct: 176 --PIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 206
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ + + SP +++ D + + C H +AV + ++WGR GQ
Sbjct: 159 WNKFGQVGAGDNIDHCSPIQIK--FPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQ 216
Query: 90 LGHGDKIQRDRPTIVSELS 108
LGHG+ + R+ P I+ LS
Sbjct: 217 LGHGESVDRNTPMILEALS 235
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 38/334 (11%)
Query: 80 YTWGRNERGQLGHGD-KIQRDRPTIVSELSKYK------IKKAGAGRSHTVVVTEDGNSL 132
Y+WG G+LG K D T VS+ + + +++ G HT+V+ +G+
Sbjct: 48 YSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVY 107
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
+ G N GQLG ++E E+ A ACG ++ LS + + + G +
Sbjct: 108 SCGANDFGQLGQDRSMRKLEQVAALS-AHEIRAVACGEAHSLALS--DAGQVFSWGCNRN 164
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG GT+ E++ RP+ I LA IV++ACG H +A+ + G +++
Sbjct: 165 GQLGCGTEE-------------ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211
Query: 253 WGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
WG G+ LG +E +PRRV + V P A+++ G+++S G +++WG
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRVS----HLVGVPLALVACGAMHSVGLTPSGTVFVWG 267
Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
+ ++ D ++P L L ++ + G H + AD ++G YG+LG
Sbjct: 268 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 327
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+G + + A+P++V L G + ++CG H++
Sbjct: 328 HG--VKVNEAVPRRVVELMGTAISQLSCGRCHTV 359
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
+IR VA G H +A+ G+ ++WG N GQLG G ++ R RP ++ +L+ I +
Sbjct: 136 EIRAVACG--EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 193
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SEVTATACGADF 172
G H + + +G ++G N GQLG G S NE P V LV + ACGA
Sbjct: 194 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMH 253
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+V L+ ++ G GQLG D +L P + L + I
Sbjct: 254 SVGLTP--SGTVFVWGRNSCGQLG--------LSDQRDRL------HPTVLKPLRSQRIK 297
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
V CG NHT A+ + G V+T+G G YG+LGH + +E VPRRV + + +S
Sbjct: 298 HVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAI----SQLSC 353
Query: 293 GSVNSSCTAG-GGQLYMWG 310
G ++ A G+LY++G
Sbjct: 354 GRCHTVAYAPQSGRLYIFG 372
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 32/341 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+R +R VA G H + + G Y+ G N+ GQLG +++ V+
Sbjct: 76 PERVRRFGTRAVREVACG--HKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--VAA 131
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVT 164
LS ++I+ G +H++ +++ G ++G N++GQLG G+ + + P ++ L + +
Sbjct: 132 LSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIV 191
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACGA + L++ + + G GQLG G D+ N + PR ++
Sbjct: 192 QIACGAVHCLALAN--NGELFSWGGNASGQLGLGRDSTGNER------------LPRRVS 237
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L G + VACG H+V + G V+ WG G+LG +Q+D P + + +
Sbjct: 238 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRI- 296
Query: 285 PPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSG 339
+ V + ++ TA GG +G+L + + P+ +++L G + + G
Sbjct: 297 --KHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 354
Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV 378
H A S +G G+LG G +SSA+P V
Sbjct: 355 RCHTVAYAPQSGRLYIFGLGMSGQLGNGTL--ESSALPVTV 393
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN P R+ LVGV + VA G + H V + G + WGRN GQLG D+ R P
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAM--HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHP 285
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
T++ L +IK G +HT +T DG FG +GQLG G NE P V L+
Sbjct: 286 TVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMG 345
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+ ++ +CG TV + G + GL GQLG+GT
Sbjct: 346 TAISQLSCGRCHTVAYAPQSG-RLYIFGLGMSGQLGNGT 383
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ PT L+PL I+ V G H A+ +G +T+G GQLGHG K+ P V
Sbjct: 283 LHPTVLKPLRSQRIKHVCCG--ENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 340
Query: 105 SELSKYKIKKAGAGRSHTVVVT-EDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
EL I + GR HTV + G FG GQLG+G++ + P V
Sbjct: 341 VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 393
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 250 VYTWGFGGYGRLGHREQKD-------EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
+Y+WG G G LG + KD P RV F V ++ G ++
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAV----REVACGHKHTLVLLA 102
Query: 303 GGQLYMWGK--LKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
G +Y G G D K + LS +R + G H +D+ SWG
Sbjct: 103 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 162
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LG G ++S PK + L +H++ +ACG H L + +
Sbjct: 163 RNGQLGCGT-EEESRLRPKVIKKLATLHIVQIACGAVHCLALAN 205
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 162/404 (40%), Gaps = 57/404 (14%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R +A C H A+ +G +TWG N+ GQLG G + DRP V L +K
Sbjct: 46 LRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVAC 105
Query: 118 GRSHTVVVTE--DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G + T + + DG W GS S R S V + V ACG
Sbjct: 106 GANCTAAIADSRDGTCRGRMWIWGQNQGSNSPR---LFSGVFSSSTVVIQVACGGAHAAA 162
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNE----YNTKDSSVKLAYEAQPRPRAIAALAGETI 231
LS E + G ++GQLG G E S VK E + +
Sbjct: 163 LS--EHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVK---------V 211
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPEA 288
+V CG HT A+ G VYTWG G G+LGHR + E PRRV + +V+
Sbjct: 212 KQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQ--- 268
Query: 289 VISAGSVNSSCTAGGGQLYMWG--------------KLKNNGD-DWMYPKPLMDLSGWNL 333
ISAG V+S + G LYMWG ++ D D+ + + + +
Sbjct: 269 -ISAGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGTSDIDFFFQRIPVLVIPSGA 327
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------MPKKVDILEGMHVI 387
R G++H V + + GY YGQ S P +D G +
Sbjct: 328 RSATCGDLHTLV-------RMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVG-EIT 379
Query: 388 SVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNS 431
+A G GHS V+ +N+ E + +L + D +S + D S
Sbjct: 380 CLAAGGGHSAVLTQASNLKE-ICELKLVDYVTASTASTIADIAS 422
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 135/319 (42%), Gaps = 76/319 (23%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L GS W +G G+ + PT ++ L + F A C H + +G+
Sbjct: 56 GKLYVFGSNNWGQLGLEAGSA---ISKPTCVKALKSEKVVF--ASCGRNHTLLYTEQGKL 110
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRS------------------ 120
Y+ G N GQLG GD R +S ++YKIK+ AG +
Sbjct: 111 YSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNS 170
Query: 121 --------------------------------HTVVVTEDGNSLAFGWNKHGQLG--SGS 146
H+ VT+DG FG ++G+LG S
Sbjct: 171 EGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
++ +P V L +V +CG + T+ ++ E + GL Q+GQLGHGT
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKE---VYTFGLGQFGQLGHGT------- 280
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+E Q P+A+ L +TI+ V CG NHT + KG +YT+G G +G+LG E+
Sbjct: 281 -----FIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEE 334
Query: 267 K--DEWVPRRVDVFQRNNV 283
+++VP F + V
Sbjct: 335 NFTNQFVPILCSNFLKFTV 353
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 72/299 (24%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V V G+ Y +G N GQLG +PT V L K+ A GR+HT
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
++ TE G + G N GQLG G EI + + +++A + A TV
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDG 161
Query: 175 ----------------------------------WLSS--------VEGASILNAGLPQY 192
W+S + + G P+
Sbjct: 162 KLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPEN 221
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LG +D + +P+ ++ L+G+ + V+CG HT+AV K VYT
Sbjct: 222 GKLGLPSDK------------LKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEK-EVYT 267
Query: 253 WGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+G G +G+LGH E +P+ VDV + +L ++ G +++ G LY +G
Sbjct: 268 FGLGQFGQLGHGTFIFETQLPKAVDVLTKKTIL----YVTCGENHTAVITDKGLLYTFG 322
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 135/319 (42%), Gaps = 76/319 (23%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L GS W +G G+ + PT ++ L + F A C H + +G+
Sbjct: 56 GKLYVFGSNNWGQLGLEAGSA---ISKPTCVKALKSEKVVF--ASCGRNHTLLYTEQGKL 110
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRS------------------ 120
Y+ G N GQLG GD R +S ++YKIK+ AG +
Sbjct: 111 YSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNS 170
Query: 121 --------------------------------HTVVVTEDGNSLAFGWNKHGQLG--SGS 146
H+ VT+DG FG ++G+LG S
Sbjct: 171 EGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
++ +P V L +V +CG + T+ ++ E + GL Q+GQLGHGT
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKE---VYTFGLGQFGQLGHGT------- 280
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+E Q P+A+ L +TI+ V CG NHT + KG +YT+G G +G+LG E+
Sbjct: 281 -----FIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEE 334
Query: 267 K--DEWVPRRVDVFQRNNV 283
+++VP F + V
Sbjct: 335 NFTNQFVPILCSNFLKFTV 353
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 72/299 (24%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V V G+ Y +G N GQLG +PT V L K+ A GR+HT
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
++ TE G + G N GQLG G EI + + +++A + A TV
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDG 161
Query: 175 ----------------------------------WLSS--------VEGASILNAGLPQY 192
W+S + + G P+
Sbjct: 162 KLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPEN 221
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LG +D + +P+ ++ L+G+ + V+CG HT+AV K VYT
Sbjct: 222 GKLGLPSDK------------LKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEK-EVYT 267
Query: 253 WGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+G G +G+LGH E +P+ VDV + +L ++ G +++ G LY +G
Sbjct: 268 FGLGQFGQLGHGTFIFETQLPKAVDVLTKKTIL----YVTCGENHTAVITDKGLLYTFG 322
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G C + +G + + + P +L L G I+ ++ G H + +G Y
Sbjct: 42 EVFVFGVNCSNCLGTGD---NQSTIVPKKLELLSGKKIKSLSYGS-GPHVLLSTEDGIVY 97
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG N QLG+G Q P I + L ++ + G H++ + +DG A+G+N
Sbjct: 98 AWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC 157
Query: 140 GQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL + V + ACG T ++ ++ + G GQLG
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGL 215
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G + Q P +AAL ++++ CG HT+A+ +G +Y WG
Sbjct: 216 GNNGN--------------QLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + + P ++ V ++ V+ A SA + S+ GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNLLSPAQIMV-EKERVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT FG N LG+G ++ I P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLEL 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LSGKKIKSLSYGSGPHVLLSTEDGI-VYAWGHNGYSQLGNGTTNQ--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I L + + +VACG++H++A+ G VY WG+ G++G ++ PR+V
Sbjct: 116 IAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKV- 174
Query: 277 VFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMD 327
N L + V+S G +S G++Y WG L NNG+ + P +
Sbjct: 175 ----TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G H D + +WG YG+LG G KS+ + ++E V
Sbjct: 230 LHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERV 286
Query: 387 ISV-ACGYGHS 396
+ + AC H+
Sbjct: 287 VEIAACHSAHT 297
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 38/334 (11%)
Query: 80 YTWGRNERGQLGHGD-KIQRDRPTIVSELSKYK------IKKAGAGRSHTVVVTEDGNSL 132
Y+WG G+LG K D T VS+ + + +++ G HT+V+ +G+
Sbjct: 54 YSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVY 113
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
+ G N GQLG ++E E+ A ACG ++ LS + + + G +
Sbjct: 114 SCGANDFGQLGQDRSMRKLEQVAALS-AHEIRAVACGEAHSLALS--DAGQVFSWGCNRN 170
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG GT+ E++ RP+ I LA IV++ACG H +A+ + G +++
Sbjct: 171 GQLGCGTEE-------------ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217
Query: 253 WGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
WG G+ LG +E +PRRV + V P A+++ G+++S G +++WG
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRVS----HLVGVPLALVACGAMHSVGLTPSGTVFVWG 273
Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
+ ++ D ++P L L ++ + G H + AD ++G YG+LG
Sbjct: 274 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 333
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+G + + A+P++V L G + ++CG H++
Sbjct: 334 HG--VKVNEAVPRRVVELMGTAISQLSCGRCHTV 365
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
+IR VA G H +A+ G+ ++WG N GQLG G ++ R RP ++ +L+ I +
Sbjct: 142 EIRAVACG--EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 199
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SEVTATACGADF 172
G H + + +G ++G N GQLG G S NE P V LV + ACGA
Sbjct: 200 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMH 259
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+V L+ ++ G GQLG D +L P + L + I
Sbjct: 260 SVGLTP--SGTVFVWGRNSCGQLG--------LSDQRDRL------HPTVLKPLRSQRIK 303
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
V CG NHT A+ + G V+T+G G YG+LGH + +E VPRRV + + +S
Sbjct: 304 HVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAI----SQLSC 359
Query: 293 GSVNSSCTAG-GGQLYMWG 310
G ++ A G+LY++G
Sbjct: 360 GRCHTVAYAPQSGRLYIFG 378
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 32/341 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+R +R VA G H + + G Y+ G N+ GQLG +++ V+
Sbjct: 82 PERVRRFGTRAVREVACG--HKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--VAA 137
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVT 164
LS ++I+ G +H++ +++ G ++G N++GQLG G+ + + P ++ L + +
Sbjct: 138 LSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIV 197
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACGA + L++ + + G GQLG G D+ N + PR ++
Sbjct: 198 QIACGAVHCLALAN--NGELFSWGGNASGQLGLGRDSTGNER------------LPRRVS 243
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L G + VACG H+V + G V+ WG G+LG +Q+D P + + +
Sbjct: 244 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRI- 302
Query: 285 PPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSG 339
+ V + ++ TA GG +G+L + + P+ +++L G + + G
Sbjct: 303 --KHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 360
Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV 378
H A S +G G+LG G +SSA+P V
Sbjct: 361 RCHTVAYAPQSGRLYIFGLGMSGQLGNGTL--ESSALPVTV 399
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN P R+ LVGV + VA G + H V + G + WGRN GQLG D+ R P
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAM--HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHP 291
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
T++ L +IK G +HT +T DG FG +GQLG G NE P V L+
Sbjct: 292 TVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMG 351
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+ ++ +CG TV + G + GL GQLG+GT
Sbjct: 352 TAISQLSCGRCHTVAYAPQSG-RLYIFGLGMSGQLGNGT 389
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ PT L+PL I+ V G H A+ +G +T+G GQLGHG K+ P V
Sbjct: 289 LHPTVLKPLRSQRIKHVCCG--ENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 346
Query: 105 SELSKYKIKKAGAGRSHTVVVT-EDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
EL I + GR HTV + G FG GQLG+G++ + P V
Sbjct: 347 VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 399
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 250 VYTWGFGGYGRLGHREQKD-------EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
+Y+WG G G LG + KD P RV F V ++ G ++
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAV----REVACGHKHTLVLLA 108
Query: 303 GGQLYMWGK--LKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
G +Y G G D K + LS +R + G H +D+ SWG
Sbjct: 109 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 168
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LG G ++S PK + L +H++ +ACG H L + +
Sbjct: 169 RNGQLGCGT-EEESRLRPKVIKKLATLHIVQIACGAVHCLALAN 211
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 51 RPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
RP+ G R C H V V + R +T+G N GQLGHGD R P ++
Sbjct: 153 RPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQG 212
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
+ G HTVV G +FG N HGQLG + P R S V ACG
Sbjct: 213 LGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACG 272
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
TV LS ++ G YGQLG G E+ + + LAG
Sbjct: 273 YYHTVALS--RAGEVVAFGRNDYGQLGLGHR--------------ESTWQGGQVPDLAGL 316
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I++VACG+ HT+++D +G VY +G +G+LG ++D P V+ ++ V
Sbjct: 317 RIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQ---- 372
Query: 290 ISAGSVNSSCTAG 302
++AG ++ C G
Sbjct: 373 VAAGFYHTLCLTG 385
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 147/344 (42%), Gaps = 38/344 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y +G+N G+LG GD ++R PT+ I AG T V+T G + G+N
Sbjct: 14 YGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSE 73
Query: 140 GQLGSGSIRN---EIEPSPVRCLVSE--------VTATACGADFTVWLSSVEGASILNAG 188
GQ G G I E+ PS + + E V+ G + E + G
Sbjct: 74 GQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCG 133
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGHG V Y PR +A AG + KVAC +HTV V
Sbjct: 134 RNNSGQLGHG----------EVGKGYSL---PRPVAGFAGYRVTKVACSYSHTVVVTDDD 180
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+T+G GYG+LGH + P + FQ VL ++ G ++ + G LY
Sbjct: 181 RTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLS----VACGVYHTVVSVASGGLYS 236
Query: 309 WGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGE 361
+GK L G + + P+ + ++ + +H V + +++G YG+
Sbjct: 237 FGKNDHGQLGLEGGESRF-TPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQ 295
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG G ++S+ +V L G+ +I VACG H++ + D V
Sbjct: 296 LGLGH--RESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRV 337
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L G I+ A G H +A+ +G Y+WG N +LG+G Q PT+
Sbjct: 65 LHPKKVEALCGKGIKTFAYGS-GPHVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLC 123
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
L++ + G H+V +TEDG ++G N GQ+ SG N+ P V ++
Sbjct: 124 LNLNEKVVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKV 183
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V + ACG ++ ++ V + G GQLG G Y Q P
Sbjct: 184 VVSIACGQTSSMAVTDV--GEVFGWGYNGVGQLGIGN--------------YVNQLSPCK 227
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L G I KVACG HT+A+ +G +Y WG G+G+LG + + P +++V +
Sbjct: 228 VTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEMGR 287
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A + + S GG++YMWG+ +
Sbjct: 288 I-SDIATLHYNHI-SVAMGQGGKIYMWGQCR 316
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG 129
+ V +G Y G N G LG GD P V L IK G H + +T G
Sbjct: 37 LIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKG 96
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE--VTATACGADFTVWLSSVEGASILN 186
++G N + +LG+GS + +P CL ++E VTA ACG+ +V L+ E + +
Sbjct: 97 EIYSWGHNGYCELGNGSTNQGL--TPTLCLNLNEKVVTAIACGSHHSVALT--EDGEVYS 152
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVD 245
G GQ+ G + Q PR + +AL G+ +V +ACG ++AV
Sbjct: 153 WGQNNCGQVSSGISSN--------------QGAPRKVNSALTGKVVVSIACGQTSSMAVT 198
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G V+ WG+ G G+LG ++ P +V N ++ + ++ G ++ + G
Sbjct: 199 DVGEVFGWGYNGVGQLGIGNYVNQLSPCKVT--GLNGIVIEK--VACGYAHTLALSDEGA 254
Query: 306 LYMWG 310
LY+WG
Sbjct: 255 LYVWG 259
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 64/280 (22%)
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
++VT+DG+ A G N G LG+G + + P V L + T L+
Sbjct: 37 LIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKG 96
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
I + G Y +LG+G+ N+ T P L + + +ACG++H+V
Sbjct: 97 EIYSWGHNGYCELGNGSTNQGLT--------------PTLCLNLNEKVVTAIACGSHHSV 142
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
A+ G VY+WG G++ ++ PR+V N+ L + V+S +S A
Sbjct: 143 ALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKV-----NSALTGKVVVSIACGQTSSMA- 196
Query: 303 GGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL 362
D G + WG+ G+L
Sbjct: 197 --------------------------------VTDVGEV----------FGWGYNGVGQL 214
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
G G Y + S P KV L G+ + VACGY H+L + D
Sbjct: 215 GIGNYVNQLS--PCKVTGLNGIVIEKVACGYAHTLALSDE 252
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 137/306 (44%), Gaps = 58/306 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G ++ +A G H VA+ +G +TWG N GQLG R P VS
Sbjct: 672 PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 727
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + AG +H++ + DG AFG+N +GQLG G+ ++ P V+ L + V A
Sbjct: 728 LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDL-TGVVAI 784
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
A G DF++ L S ++ + G YG+LG+GT T SSV + +AIAA
Sbjct: 785 AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 837
Query: 226 ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
+G T +K +A G HT+A+ S G
Sbjct: 838 DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 897
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V++WG+ GYG+LG+ VP + L A I+AG S G LY
Sbjct: 898 TVWSWGYNGYGQLGNGNNTSRSVPAAIP------GLASIASIAAGENQSIAYGNDGILYS 951
Query: 309 WGKLKN 314
WG+ N
Sbjct: 952 WGRNAN 957
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A + H + + +G + WG N GQLG G P V L+ +K G +
Sbjct: 632 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 689
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HTV + DG +G+N +GQLG S P V L + TA + G + ++ L S
Sbjct: 690 HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 746
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G YGQLG GT + Q P + L G +V +A G +
Sbjct: 747 DGTVWAFGYNGYGQLGDGTTSS--------------QRTPVQVKDLTG--VVAIAAGKDF 790
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++A+ S G V++WG YG LG+ VP +V +L I+AG +
Sbjct: 791 SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 844
Query: 301 AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
G ++ WG N N P+ ++G ++ + +G H + +D + SW
Sbjct: 845 KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 902
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ YG+LG G S ++P + L + S+A G S+
Sbjct: 903 GYNGYGQLGNG--NNTSRSVPAAIPGLA--SIASIAAGENQSI 941
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV VA +A+ +G ++WG+N G+LG+G + P V+
Sbjct: 771 TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 826
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ +K AG H V + +DG+ A+G+N +G+LG+ S ++ +PV+ V+ +
Sbjct: 827 LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 882
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T+ L S ++ + G YGQLG+G N SV P AI
Sbjct: 883 IAAGPYHTLALKS--DGTVWSWGYNGYGQLGNG-----NNTSRSV---------PAAIPG 926
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
LA +I +A G N ++A + G +Y+WG G+LG+ D VP +V
Sbjct: 927 LA--SIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 974
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 190 PQYGQLGHGTDNEYN----TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
P + G + Y KD++ + + P +A G + V+ NHT+ +
Sbjct: 586 PSFTVTGLSPNTSYTFTVKAKDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIK 645
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
S G V+ WG+ G+G+LG VP +V L +I+ G ++ G
Sbjct: 646 SDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGT 699
Query: 306 LYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L+ W G+L ++ Y P + L+ W + +G H + +D + ++G+
Sbjct: 700 LHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNW--TAVSAGENHSLALKSDGTVWAFGYNG 757
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G S P +V L G V+++A G SL +
Sbjct: 758 YGQLGDGT--TSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 794
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 151/337 (44%), Gaps = 38/337 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G + +G N QLG G P VS L+ I AG G HT+ + D
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTD-AIAIAG-GVYHTIALKSD 659
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +GWN GQLG G+ N P V L ++V A A G T+ L S ++ G
Sbjct: 660 GTVWTWGWNNSGQLGDGTTINRSTPVQVIGL-TDVIAIAGGDYHTIALKS--DGTVWTWG 716
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG G +T P + LA I+ +A G H++A+ S G
Sbjct: 717 FNYYGQLGGGATTNRST--------------PVQVKGLA--DIIAIAGGYVHSIALKSDG 760
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG+ GYG+LG D P +V + L I+ G +++ G ++
Sbjct: 761 TVWAWGYNGYGQLGDGSTTDHLTPVQV------SGLTDIIAIAGGYIHTIALKSDGTVWA 814
Query: 309 WGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGEL 362
WG + +G P + +SG + ++H + +D + +WG YG+L
Sbjct: 815 WGHNEGGQLGDGTTTNSSTP-VQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL 873
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G ++S +P +V L VI++A GY H++ +
Sbjct: 874 GDGSTTERS--LPVQVIGLT--DVIAIAGGYYHTIAL 906
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ +A G + H +A+ +G + WG NE GQLG G R P VS L+ I AG
Sbjct: 294 DVIAIAGG--NAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD-VIAIAG 350
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
G SHT+V+ DG +G N+ GQLG GS N P V L ++V A A G T+ +
Sbjct: 351 -GYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGL-ADVIAIAGGVYHTIAV 408
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S ++ G YGQLG GT T +SS P + L ++ +A
Sbjct: 409 KS--DGTMWAWGYNWYGQLGDGT-----TINSS---------TPVQVNGL--TDVIAIAG 450
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G HT+A+ S G V+TWGF YG+LG + P + + +V P
Sbjct: 451 GYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPT 501
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G+ G N +P +++ L DI +A G V H +A+ +G + WG N GQLG G
Sbjct: 721 GQLGGGATTNRSTPVQVKGLA--DIIAIAGGYV--HSIALKSDGTVWAWGYNGYGQLGDG 776
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P VS L+ I G HT+ + DG A+G N+ GQLG G+ N P
Sbjct: 777 STTDHLTPVQVSGLTD--IIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTP 834
Query: 154 SPVRCLVSEVTATA-------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
V L + TA +D TVW G YGQLG G+ E
Sbjct: 835 VQVSGLTDVIAVTARLYHTIALKSDGTVW----------TWGRNIYGQLGDGSTTE---- 880
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
R + + ++ +A G HT+A+ S G V+ WG+ G +LG+
Sbjct: 881 ------------RSLPVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWST 928
Query: 267 KDEWVPRRVDVFQRNNVLPPEAV 289
K+ P R + N+V P +
Sbjct: 929 KNSSTPVRSLRYDMNSVTTPAVI 951
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 153/339 (45%), Gaps = 42/339 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G + G N GQLG G I R P VS L+ I AG G HT+ + D
Sbjct: 1050 HTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD-VIAIAG-GDYHTIALKSD 1107
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A+G N +GQLG G+I N P+PV L + + A A G T+ L S ++ G
Sbjct: 1108 NTVWAWGSNSYGQLGDGTITNRSIPTPVTYL-TNIIAIAGGYVHTIALKS--DGTVWAWG 1164
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG G+ +T L + A+AGE + HTVA+ S G
Sbjct: 1165 YNGYGQLGDGSTTNRSTPVQVSGL--------TDVIAIAGEYV--------HTVALKSDG 1208
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG+ GYG+LG + P +V + L I+ G V++ G ++
Sbjct: 1209 TVWAWGYNGYGQLGDGSTTNRSTPVQV------SGLTDVIAIAGGYVHTIALKSDGTVWT 1262
Query: 309 WGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
WG N+G + + P + L+ + + G+ H + +D++ +WG YG
Sbjct: 1263 WG-WNNSGQLGDGTTINRLTPVQVSGLT--DAIAIAGGDYHTIALKSDNTVWAWGSNSYG 1319
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG G + P +V L I++A G H++ +
Sbjct: 1320 QLGDGT--TINRLTPVQVSGLT--DAIAIAGGDYHTIAL 1354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 148/345 (42%), Gaps = 40/345 (11%)
Query: 28 TCWDAVGRRKGAL-DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
T W G L DG + +P ++ L D+ +A G H +A+ + + WG
Sbjct: 1059 TVWACGANWNGQLGDGTTINRSTPVQVSGLT--DVIAIAGG--DYHTIALKSDNTVWAWG 1114
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G R PT V+ L+ I G HT+ + DG A+G+N +GQLG
Sbjct: 1115 SNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQLG 1172
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
GS N P V L ++V A A TV L S ++ G YGQLG G+
Sbjct: 1173 DGSTTNRSTPVQVSGL-TDVIAIAGEYVHTVALKS--DGTVWAWGYNGYGQLGDGSTTNR 1229
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+T P ++ L ++ +A G HT+A+ S G V+TWG+ G+LG
Sbjct: 1230 ST--------------PVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGD 1273
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMY 321
+ P +V + L I+ G ++ ++ WG GD
Sbjct: 1274 GTTINRLTPVQV------SGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTI 1327
Query: 322 PKPL-MDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGELG 363
+ + +SG +G +H + +D++ +WG YG+LG
Sbjct: 1328 NRLTPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 159/356 (44%), Gaps = 38/356 (10%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P ++ L D+ +A G + H +A+ +G + WG NE GQLG G R P
Sbjct: 182 NRSTPVQVSGLT--DVIAIAGG--AYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV 237
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
VS L+ I AG G +HT+ + DG A+G N+ G+LG GS N P V L S+
Sbjct: 238 QVSGLTD-VIAIAG-GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGL-SD 294
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A A G T+ L S ++ G + GQLG G+ +T P
Sbjct: 295 VIAIAGGNAHTIALKS--DGTVWAWGDNEGGQLGDGSTTNRST--------------PVK 338
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
++ LA ++ +A G +HT+ + S G V+TWG G+LG + P +V +
Sbjct: 339 VSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQV------S 390
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
L I+ G ++ G ++ WG +G P + ++G +
Sbjct: 391 GLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTP-VQVNGLTDVIAIA 449
Query: 339 GNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
G +H + +D + +WG YG+LG G +S+ + + ++ + +V G
Sbjct: 450 GGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTG 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H VA+ +G + WG N GQLG G R P VS L+ I AG G HT+ +
Sbjct: 1199 VHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD-VIAIAG-GYVHTIALKS 1256
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +GWN GQLG G+ N + P V L + A A G T+ L S ++
Sbjct: 1257 DGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAI-AIAGGDYHTIALKSDN--TVWAW 1313
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YGQLG GT + P ++ L + +A G HT+A+ S
Sbjct: 1314 GSNSYGQLGDGTTIN--------------RLTPVQVSGLTDA--IAIAGGDYHTIALKSD 1357
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V+ WG YG+LG DV N++ P + ++S
Sbjct: 1358 NTVWAWGSNSYGQLG-------------DVSTANSLTPAQCLLS 1388
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 38/337 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G +TWG N GQLG R P VS L+ I AG G HT+ + D
Sbjct: 154 HTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD-VIAIAG-GAYHTIALKSD 211
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N+ GQLG GS + P V L ++V A A G T+ L S ++ G
Sbjct: 212 GTVWAWGNNEGGQLGDGSTTDRSTPVQVSGL-TDVIAIAGGYAHTIALKS--DGTVWAWG 268
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LG G +T + S+ P + L+ ++ +A G HT+A+ S G
Sbjct: 269 DNEGGRLGDG-----STTNRSI---------PVKVGGLS--DVIAIAGGNAHTIALKSDG 312
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG G+LG + P +V + L I+ G ++ G ++
Sbjct: 313 TVWAWGDNEGGQLGDGSTTNRSTPVKV------SGLADVIAIAGGYSHTIVLRSDGTVWT 366
Query: 309 WGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGEL 362
WG + +G P + +SG +G ++H + +D + +WG+ YG+L
Sbjct: 367 WGHNEGGQLGDGSTTNRSTP-VQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQL 425
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G +S+ P +V+ L VI++A GY H++ +
Sbjct: 426 GDGT--TINSSTPVQVNGLT--DVIAIAGGYYHTIAM 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 128/302 (42%), Gaps = 38/302 (12%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
SE + + AG HT+ + DG A+G N + QLG GS + P V L +
Sbjct: 586 SETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAI- 644
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G T+ L S ++ G GQLG GT R +
Sbjct: 645 AIAGGVYHTIALKS--DGTVWTWGWNNSGQLGDGTTIN----------------RSTPVQ 686
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+ ++ +A G HT+A+ S G V+TWGF YG+LG + P +V L
Sbjct: 687 VIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQV------KGL 740
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDS 338
I+ G V+S G ++ WG GD D + P + L+ ++ +
Sbjct: 741 ADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLT--DIIAIAG 798
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G +H + +D + +WGH + G+LG G +S+ P +V L VI+V H++
Sbjct: 799 GYIHTIALKSDGTVWAWGHNEGGQLGDGT--TTNSSTPVQVSGLT--DVIAVTARLYHTI 854
Query: 398 VI 399
+
Sbjct: 855 AL 856
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 40/337 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G +TWGRN GQLG G +R P V L+ I AG G HT+ + D
Sbjct: 852 HTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTD-VIAIAG-GYYHTIALKSD 909
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G+N + QLG+ S +N +PVR L ++ + A T + V +S+L G
Sbjct: 910 GAVWAWGYNGNNQLGNWSTKNS--STPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNG 967
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ +Y T S V +T + CGT+ + G
Sbjct: 968 WVDGNRAATTAWFDYGTS-SGVYF----------------DTTATIPCGTSSAYISATLG 1010
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+ W Y R+ + R + + P + ISAG+ ++ G ++
Sbjct: 1011 SLTPWTTYYY-RIAAQNS-------RGISYGSETIFLPRSQISAGAYHTLTLKPDGTVWA 1062
Query: 309 ----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGEL 362
W +G P + +SG +G +H + +D++ +WG YG+L
Sbjct: 1063 CGANWNGQLGDGTTINRSTP-VQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQL 1121
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G +S +P V L ++I++A GY H++ +
Sbjct: 1122 GDGTITNRS--IPTPVTYLT--NIIAIAGGYVHTIAL 1154
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 111/283 (39%), Gaps = 74/283 (26%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG HT+ + DG A G N +GQLG G+ N P V L ++V A A G T+ L
Sbjct: 1046 AGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL-TDVIAIAGGDYHTIAL 1104
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S ++ G YGQLG GT + + P P I+ +A
Sbjct: 1105 KSDN--TVWAWGSNSYGQLGDGT------------ITNRSIPTPVTYL----TNIIAIAG 1146
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G HT+A+ S G V+ WG+ GYG+LG + P +V + E V +
Sbjct: 1147 GYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTV---- 1202
Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
LK++G W +WG+
Sbjct: 1203 --------------ALKSDGTVW---------------------------------AWGY 1215
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G +S+ P +V L VI++A GY H++ +
Sbjct: 1216 NGYGQLGDGSTTNRST--PVQVSGLT--DVIAIAGGYVHTIAL 1254
>gi|403361228|gb|EJY80312.1| hypothetical protein OXYTRI_22298 [Oxytricha trifallax]
Length = 855
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 145/344 (42%), Gaps = 58/344 (16%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A GR + WG +RG+LG I RD+ P V + K K+ G V + E+
Sbjct: 157 AFSKTGRLWVWGGTQRGKLGLSQMI-RDQLEPLNVEFEVQNKEKENGIETQLEVFLDENK 215
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
N H ++ + I +E A + G D + L + + + G
Sbjct: 216 N--------HKKINTEYI-------------TEFEAVSWGIDHFLLLD--KKKRVFSTGF 252
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
+YG+LGHG + + + +P I L G+ IV + CG +H++AV G
Sbjct: 253 AKYGRLGHGDERD--------------RTKPFMIKELEGKKIVYIQCGMHHSMAVSQDGD 298
Query: 250 VYTWGFGGYGRLGH------REQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAG 302
VY+WG G GRLG R ++ +P++++ F N ++ +S GS S
Sbjct: 299 VYSWGLGNGGRLGQGYNDESRSNPNQLLPKKIEFTFDDNQIMN----VSCGSTISCVAVK 354
Query: 303 GGQLYMWGK---LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
G LY WGK K DD++ Y P + + + G H + + WG
Sbjct: 355 AGTLYTWGKGEHEKPKFDDFIEYSSPFPMIEDKQIVYVSCGASHVMALDRNGRLFGWGQG 414
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G LG+G ++ S P + E I VACG ++VI +
Sbjct: 415 NEGCLGHGDCKKRLSVCP--ISFFENKRCIDVACGDKFTVVIAE 456
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D + R ++ G + G+LGHGD+ R +P ++ EL KI G H++ V++D
Sbjct: 237 HFLLLDKKKRVFSTGFAKYGRLGHGDERDRTKPFMIKELEGKKIVYIQCGMHHSMAVSQD 296
Query: 129 GNSLAFGWNKHGQLGSG------SIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVE 180
G+ ++G G+LG G S N++ P + +++ +CG+ T+ +V+
Sbjct: 297 GDVYSWGLGNGGRLGQGYNDESRSNPNQLLPKKIEFTFDDNQIMNVSCGS--TISCVAVK 354
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G ++ + EY++ P P + + IV V+CG +H
Sbjct: 355 AGTLYTWGKGEHEKPKFDDFIEYSS------------PFP----MIEDKQIVYVSCGASH 398
Query: 241 TVAVDSKGYVYTWGFGGYGRLGH 263
+A+D G ++ WG G G LGH
Sbjct: 399 VMALDRNGRLFGWGQGNEGCLGH 421
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P++ D + V C + H +A+D GR + WG+ G LGHGD +R +S +
Sbjct: 382 PMIE-DKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKKRLSVCPISFFENKR 440
Query: 112 IKKAGAGRSHTVVVTE----DGNSLAFGW-NKHGQL 142
G TVV+ E N++ F + NK G +
Sbjct: 441 CIDVACGDKFTVVIAEVYPDKKNTMNFDFLNKSGSM 476
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 166/390 (42%), Gaps = 44/390 (11%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
++VG G + + + P L V +D+ +A C + H V +G + WG G+L
Sbjct: 282 ESVGSGDGGIKTDSLLPKALESAVVLDVHHIA--CGNRHAALVTKQGEVFCWGDESGGRL 339
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
GHG + P +V L+ + G H+ VT G+ +G H G LG G+
Sbjct: 340 GHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDI 399
Query: 149 NEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ P V + V++ ACG T ++S + G +G LGHG
Sbjct: 400 SHWTPKRVGGPLEGIRVSSVACGVWHTALVTS--AGQLFTFGDGTFGVLGHGDKR----- 452
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
SV L P+ + +L G V+VACG HT AV S G ++TWG
Sbjct: 453 --SVAL-------PKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGD 503
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNN---VLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
G GRLGH +++ + VP V N V + A ++N G LY G+L
Sbjct: 504 GDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY--GQL 561
Query: 313 KNNGDDWMYPKPLMDLSGWN--LRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQ 369
+ D P L++ W + + G H + A + +WG G LG+G
Sbjct: 562 GDVRADGKLPG-LVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMD 620
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+++ P V+ L+ V SVACG G + I
Sbjct: 621 RNT--PTLVEALKEKQVKSVACGSGFTAAI 648
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G V+ WG GRLGH D P+ V+
Sbjct: 298 PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALA 357
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N ++ G +S G L+ WG L +G+D W + L G
Sbjct: 358 TTNT----EFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEG 413
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H V + ++G +G LG+G ++S A+PK+V+ L+G+ + V
Sbjct: 414 IRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG--DKRSVALPKEVESLKGLKTVRV 471
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 472 ACGVWHTAAVVE 483
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 123/250 (49%), Gaps = 28/250 (11%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D ++V P +R LV + V C S H +A+ G Y+WG N GQLG
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTV--VQIACGSNHSLALTCCGELYSWGSNLYGQLGV 173
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
D Q + P ++ L + G +H+ ++++ +S FGW N GQLG
Sbjct: 174 SSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISK--SSAVFGWGRNNCGQLGLNDE 231
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N P+ ++ L + V ACG +F+V+L+ +EG + G YGQLGHG +
Sbjct: 232 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLT-IEGG-VFTCGAGAYGQLGHGFSSN---- 285
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHRE 265
+ PR + L G TI +VACG HT+A V S+G +Y +G G G+LG R
Sbjct: 286 ----------EMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN 335
Query: 266 QKDEWVPRRV 275
K +P+ V
Sbjct: 336 TKSLNLPQLV 345
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 36/334 (10%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G ++ Q P+ + + + G HT+ +T G A G N
Sbjct: 4 YCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSN 63
Query: 138 KHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG + ++ ++ V +T ACG+ ++ LS E + + G + GQLG
Sbjct: 64 DYSQLGHELPTKRPLQIPELQDYV--ITQIACGSRHSMALS--EWGQVFSWGDNECGQLG 119
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
H +D + VKL P+ + L +T+V++ACG+NH++A+ G +Y+WG
Sbjct: 120 HASDQDI------VKL-------PKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSN 166
Query: 257 GYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG D P R+ + P + I+ G +S + ++ WG+
Sbjct: 167 LYGQLGVSSPNDLQQSNTPMRLTTL----LGIPVSAIACGGNHSFLISKSSAVFGWGRNN 222
Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGP 366
N+ + YP L L +R + G+ F+ + + G YG+LG+G
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHG- 281
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 282 -FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Query: 29 CWDAVGRRKGALDG----NLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
CW + L G +++P+R+ +P V+ C H + + G+ Y
Sbjct: 5 CWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVN----QIACGHRHTLFLTASGKVYAC 60
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G N+ QLGH ++ RP + EL Y I + G H++ ++E G ++G N+ GQL
Sbjct: 61 GSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118
Query: 143 GSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
G S ++ ++ P VR LVS+ V ACG++ ++ L+ + + G YGQLG +
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCC--GELYSWGSNLYGQLGVSSP 176
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N+ ++ P + L G + +ACG NH+ + V+ WG G+
Sbjct: 177 NDLQQSNT-----------PMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQ 225
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKN-N 315
LG ++ + P ++ + V V + T GG +G+L +
Sbjct: 226 LGLNDETNRAYPTQLKTLRTLGV---RFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGF 282
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSA 373
+ M P+ +M+L G + + GN H S +G G+L G KS
Sbjct: 283 SSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL--GTRNTKSLN 340
Query: 374 MPKKV 378
+P+ V
Sbjct: 341 LPQLV 345
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ FV C S H +A+ G Y++G+ G LGHG P IV L I +
Sbjct: 34 ELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIA 93
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
G +H+ +T +G ++G K+GQLG GS+ N ++P PV L +T CGAD+T+
Sbjct: 94 CGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMA 153
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ S + + G +GQ GHGT + P+ + +L + IV+ +
Sbjct: 154 IDS--DGQLFSWGHGHWGQTGHGTQDNILV--------------PKLVCSLENDNIVQAS 197
Query: 236 CGTNHTVAVDSKGYVYTWG 254
G H VA+ S G VY WG
Sbjct: 198 AGARHAVALTSGGGVYAWG 216
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 24/234 (10%)
Query: 81 TWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+WG E GQLG D P + + + G SHT+ +T G+ +FG
Sbjct: 3 SWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G LG G+ + P V L + ACG + + L+ VEG + + G +YGQLG
Sbjct: 63 TFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT-VEG-QLFSWGRGKYGQLG 120
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G+ E +P + AL+ + +V CG ++T+A+DS G +++WG G
Sbjct: 121 CGS--------------VENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+G+ GH Q + VP+ V + +N++ SAG+ ++ GG +Y WG
Sbjct: 167 HWGQTGHGTQDNILVPKLVCSLENDNIVQA----SAGARHAVALTSGGGVYAWG 216
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+++ G ++GQLG KD++ P PR + V+VACG++HT+A
Sbjct: 1 LVSWGCGEFGQLG--------LKDAA---GVFNSPLPRFLRGSRELLFVRVACGSSHTLA 49
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G VY++G G +G LGH + P VD ++ I+ G +S
Sbjct: 50 LTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQ----IACGDNHSCALTVE 105
Query: 304 GQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
GQL+ WG+ K + ++ + P P+ LS L + G + + +D SWGH
Sbjct: 106 GQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGH 165
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G+ G+G Q + +PK V LE +++ + G H++ +
Sbjct: 166 GHWGQTGHGT--QDNILVPKLVCSLENDNIVQASAGARHAVAL 206
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + + +A+D +G+ ++WG GQ GHG + P +V L I +A AG H V
Sbjct: 146 CGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVA 205
Query: 125 VTEDGNSLAFGWNKHGQL 142
+T G A+G N+ GQ+
Sbjct: 206 LTSGGGVYAWGDNEQGQV 223
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
DI+ V C H +A+ E Y+WG+N+ GQLG G +I+++ P + L+
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHI 179
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG H+ +T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 180 AAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTA 239
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ G AG YGQLGH + N + PR + L G + ++
Sbjct: 240 ALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EVNPRKVFELMGSIVTQI 283
Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
ACG HT+A V S G +Y++G GG G+LG
Sbjct: 284 ACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 35/345 (10%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
++ P R + ++R V GC S H V V +G YT G N+ GQLGH DK R +P
Sbjct: 6 VLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPDQ 61
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
V L I G +HT+ + + G ++G HGQ+G + I P ++ L
Sbjct: 62 VGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI 121
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG ++ LS + + I + G QYGQLG G++ + K+S+ PR
Sbjct: 122 QIVQVACGHHHSLALS--KESDIYSWGQNQYGQLGLGSEIK---KESA----------PR 166
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +LAG +A G H+ A+ G ++ WG +G+LG ++ D P + +
Sbjct: 167 HIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQ 226
Query: 282 NVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
++ A+ G V + G GQL N+ + + P+ + +L G +
Sbjct: 227 KIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTNHEVNPRKVFELMGSIVT 281
Query: 335 CMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ G H FV + S+G G+LG G + S K
Sbjct: 282 QIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 326
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 32/298 (10%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
++ G G HTV V +DG G N GQLG R + P V L ++ + A +CG
Sbjct: 20 VRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK--PDQVGALDAQTIVAVSCGE 77
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T+ L+ + + + G +GQ+G +Y +++ PR I +L
Sbjct: 78 AHTLALN--DKGQVFSWGHAAHGQIGLSVAEDY------IRV-------PRNIKSLYDIQ 122
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAV 289
IV+VACG +H++A+ + +Y+WG YG+LG E K E PR + ++ P A
Sbjct: 123 IVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHI----KSLAGIPFAH 178
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I+AG +S G ++ WG+ K N+ D P L L + + G H
Sbjct: 179 IAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHT 238
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + ++G YG+LG+ + + P+KV L G V +ACG H+L V
Sbjct: 239 AALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKVFELMGSIVTQIACGRQHTLAFV 294
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 147 IRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
I E+ P RC + V CG+ TV++ ++ ++ G GQLGH
Sbjct: 1 IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFV--LDDGTVYTCGCNDLGQLGH------ 52
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
D S K +P + AL +TIV V+CG HT+A++ KG V++WG +G++G
Sbjct: 53 ---DKSRK-------KPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGL 102
Query: 264 REQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNN 315
+D VPR + ++ ++ G +S + +Y WG+ L +
Sbjct: 103 SVAEDYIRVPRNIKSLYDIQIVQ----VACGHHHSLALSKESDIYSWGQNQYGQLGLGSE 158
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAM 374
P+ + L+G + +G H F S I WG ++G+LG +S+
Sbjct: 159 IKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSA-- 216
Query: 375 PKKVDILEGMHVISVACGYGHS 396
P + L +I + CG H+
Sbjct: 217 PALLKSLRSQKIIHICCGEDHT 238
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ FV C S H +A+ G Y++G+ G LGHG P IV L I +
Sbjct: 34 ELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIA 93
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
G +H+ +T +G ++G K+GQLG GS+ N ++P PV L +T CGAD+T+
Sbjct: 94 CGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMA 153
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ S + + G +GQ GHGT + P+ + +L + IV+ +
Sbjct: 154 IDS--DGQLFSWGHGHWGQTGHGTQDNILV--------------PKLVCSLENDNIVQAS 197
Query: 236 CGTNHTVAVDSKGYVYTWG 254
G H VA+ S G VY WG
Sbjct: 198 AGARHAVALTSGGGVYAWG 216
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 24/234 (10%)
Query: 81 TWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+WG E GQLG D P + + + G SHT+ +T G+ +FG
Sbjct: 3 SWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G LG G+ + P V L + ACG + + L+ VEG + + G +YGQLG
Sbjct: 63 TFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT-VEG-QLFSWGRGKYGQLG 120
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G+ E +P + AL+ + +V CG ++T+A+DS G +++WG G
Sbjct: 121 CGS--------------VENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+G+ GH Q + VP+ V + +N++ SAG+ ++ GG +Y WG
Sbjct: 167 HWGQTGHGTQDNILVPKLVCSLENDNIVQA----SAGARHAVALTSGGGVYAWG 216
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+++ G ++GQLG KD++ P PR + V+VACG++HT+A
Sbjct: 1 LVSWGCGEFGQLG--------LKDAA---GVFTSPLPRFLRGSRELLFVRVACGSSHTLA 49
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G VY++G G +G LGH + P VD ++ I+ G +S
Sbjct: 50 LTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQ----IACGDNHSCALTVE 105
Query: 304 GQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
GQL+ WG+ K + ++ + P P+ LS L + G + + +D SWGH
Sbjct: 106 GQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGH 165
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G+ G+G Q + +PK V LE +++ + G H++ +
Sbjct: 166 GHWGQTGHGT--QDNILVPKLVCSLENDNIVQASAGARHAVAL 206
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + + +A+D +G+ ++WG GQ GHG + P +V L I +A AG H V
Sbjct: 146 CGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVA 205
Query: 125 VTEDGNSLAFGWNKHGQL 142
+T G A+G N+ GQ+
Sbjct: 206 LTSGGGVYAWGDNEQGQV 223
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 41/368 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D + ++ G + + V V +G+ Y+WG G+LGHG P ++ E
Sbjct: 287 PKVLKSHVALDAQSISCG--TNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 344
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSE-- 162
+ ++ A G HT VT G+ A+G H G LG GS + + PVR L
Sbjct: 345 FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 402
Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V A +CG T +++S EG + G +G LGHG N P
Sbjct: 403 IYVKAISCGPWHTAFVTS-EG-KLFTFGDGTFGALGHGDRISTNI--------------P 446
Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
R + AL G +K ACG H+ AV S G ++TWG G GRLGH + + +P
Sbjct: 447 REVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 506
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
V + ++ G + + GQ+Y G + D P + G +
Sbjct: 507 CVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSF 562
Query: 334 RCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ HH + + + +WG G+LG+G + MP V L+G V V C
Sbjct: 563 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG--DTEYRCMPTLVKALKGKQVRKVVC 620
Query: 392 GYGHSLVI 399
G ++ I
Sbjct: 621 GSNYTATI 628
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
D VW S+ G +L G+ + G + + K +A +AQ
Sbjct: 253 CDVFVWGESI-GDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQ------------ 299
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++CGTN+ V V +G +Y+WG GRLGH P+ +D F + V +
Sbjct: 300 ---SISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTV----EL 352
Query: 290 ISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
G ++ G LY WG L + W + L + G ++ + G
Sbjct: 353 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 412
Query: 341 MHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H FV ++ ++G +G LG+G + S+ +P++V+ L G I ACG HS +
Sbjct: 413 WHTAFVTSEGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIKAACGVWHSAAV 470
Query: 400 V 400
V
Sbjct: 471 V 471
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 41/368 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D + ++ G + + V V +G+ Y+WG G+LGHG P ++ E
Sbjct: 290 PKVLKSHVALDAQSISCG--TNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSE-- 162
+ ++ A G HT VT G+ A+G H G LG GS + + PVR L
Sbjct: 348 FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 405
Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V A +CG T +++S EG + G +G LGHG N P
Sbjct: 406 IYVKAISCGPWHTAFVTS-EG-KLFTFGDGTFGALGHGDRISTNI--------------P 449
Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
R + AL G +K ACG H+ AV S G ++TWG G GRLGH + + +P
Sbjct: 450 REVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
V + ++ G + + GQ+Y G + D P + G +
Sbjct: 510 CVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSF 565
Query: 334 RCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ HH + + + +WG G+LG+G + MP V L+G V V C
Sbjct: 566 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG--DTEYRCMPTLVKALKGKQVRKVVC 623
Query: 392 GYGHSLVI 399
G ++ I
Sbjct: 624 GSNYTATI 631
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
D VW S+ G +L G+ + G + + K +A +AQ
Sbjct: 256 CDVFVWGESI-GDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQ------------ 302
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++CGTN+ V V +G +Y+WG GRLGH P+ +D F + V +
Sbjct: 303 ---SISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTV----EL 355
Query: 290 ISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
G ++ G LY WG L + W + L + G ++ + G
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415
Query: 341 MHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H FV ++ ++G +G LG+G + S+ +P++V+ L G I ACG HS +
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIKAACGVWHSAAV 473
Query: 400 V 400
V
Sbjct: 474 V 474
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 162/373 (43%), Gaps = 64/373 (17%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +++ L GV A H VAV +G + WG GQLG G + R P V
Sbjct: 512 LTPVQVQGLAGV----TAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQV 567
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ + AG +HTV + +DG A+G+N +GQLG G+ + P V + V
Sbjct: 568 QGLTG--VTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAV- 624
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G TV + ++ ++ G +GQLG GT ++ P +
Sbjct: 625 AIAAGGSHTV--ALLQDGTVWTWGYNIWGQLGDGTTTHRHS--------------PVQVQ 668
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
LA ++ +A HTVAV G V+TWG G+LG D +R+ Q + +
Sbjct: 669 GLA--DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLG-----DGTTTQRLTPVQVHGLT 721
Query: 285 PPEAVISAGSVNSSCTAGGGQ---LYMWGKLKNNGDDW-----------MYP---KPLMD 327
A+++ +SS T Q L+ WG + W + P + LMD
Sbjct: 722 DATAILT----SSSQTVAMRQDRTLWAWGD-----NHWGQLGDGTTTRRLTPVQVQGLMD 772
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
++ M +G H G D + +WG YG+LG GP + +P +V L
Sbjct: 773 VT-----AMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYR--LLPVQVQGLTSATA 825
Query: 387 ISVACGYGHSLVI 399
++A G H++ +
Sbjct: 826 TAIAAGDSHTVAV 838
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +++ + +AAG H +AV +G ++WG N GQLG G Q P V
Sbjct: 1016 LTPVQVQVQGLTGVAAIAAGF--SHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQV 1073
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ + AG +HTV + DG A+G N GQLG G+ + P V+ L + V
Sbjct: 1074 QGLTG--VTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL-TGVI 1130
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G+ TV L + ++ G +GQLG GT T P +
Sbjct: 1131 AIAAGSLHTVALR--QDGTVWAWGRNSWGQLGDGTTTHRAT--------------PVQVQ 1174
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L G ++ +A G+ HTVA+ G V+ WGF G+LG P +V +
Sbjct: 1175 GLTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTI 1232
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
+A +V TA +WG+L + D P + L+G + + +G H
Sbjct: 1233 AAGYFHTA-AVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG--VSALAAGYAHT 1289
Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
VG D + +WG+ +LG G +S+ P +V+ L G S+A G H++ +
Sbjct: 1290 VVVGEDGTVWAWGNNSGTQLGNGSSTDRST--PVQVEALTG--AFSLAAGRFHTVAM 1342
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 156/368 (42%), Gaps = 50/368 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +++ L+ D+ +AAG H A +G +TWG N GQLG G R P V
Sbjct: 762 LTPVQVQGLM--DVTAMAAG--GYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQV 817
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
L+ AG SHTV V +DG A+G N GQLG G+ + P V+ + +V
Sbjct: 818 QGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDV 877
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
TA A G ++ + ++ GL YGQLG G L+Y P +
Sbjct: 878 TAMAAGGYHMA--AAGQDGTLWTWGLNSYGQLGGG------------PLSYRLLP----V 919
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ +A G H A G ++TWG YG+LG +P +V
Sbjct: 920 QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQV------QG 973
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL-----------MDLSGWN 332
L ++AG + + G L+ WG L + G + PL L+G
Sbjct: 974 LMSVTAMAAGGYHMAAAGQDGTLWTWG-LNSYGQ--LGGGPLSQSLTPVQVQVQGLTG-- 1028
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + +G H V D + SWG YG+LG G Q S P +V L G+ IS
Sbjct: 1029 VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQ--SLTPVQVQGLTGVTAIS--A 1084
Query: 392 GYGHSLVI 399
G H++ +
Sbjct: 1085 GDAHTVAL 1092
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 157/362 (43%), Gaps = 46/362 (12%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV +AAG + + VA +G + WG NE GQLG G +R P V
Sbjct: 363 TPVQVQGLTGVTA--IAAGYL--YTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQ 418
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ + AG +TV +DG A+G NK QLG G++ P V+ L +TA
Sbjct: 419 GLTG--VTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGL-EGITA 475
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A TV + + ++ G GQLG GT T P +
Sbjct: 476 IAASNLLTV--AVRQDGTVWAWGDNARGQLGDGTTTRRLT--------------PVQVQG 519
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG + VA H VAV G V+ WG G +G+LG D P +V L
Sbjct: 520 LAG--VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQV------QGLT 571
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDS 338
I+AGS ++ G ++ WG N G + P + ++G + +
Sbjct: 572 GVTAIAAGSNHTVALRQDGTVWAWG-FNNYGQLGDGTTAGHLTPVQVPGVTG--AVAIAA 628
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D + +WG+ +G+LG G + S P +V L VI++A GH++
Sbjct: 629 GGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHS--PVQVQGLA--DVIAIATNNGHTV 684
Query: 398 VI 399
+
Sbjct: 685 AV 686
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 41 DGNLVSPTRLRPLVGVDIRF----VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
DG L T R V + +AAG H VA +G +TWGRN GQLG G I
Sbjct: 102 DGQLGDGTTTRRFSPVQVMTGATAIAAGI--YHTVAASQDGTVWTWGRNSSGQLGDGTSI 159
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
QR P V L+ + AGR+H+ + + G +G N GQLG G+ + P V
Sbjct: 160 QRFSPVQVQGLT--GVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQV 217
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ L + +A ++ ++ + ++ G GQLG GT ++V+
Sbjct: 218 QGLTGVIAISANDSET---VALRQDGTVWAWGNNSSGQLGDGT--------TTVRFT--- 263
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L G + +A G VA+ G ++ WG G+LG+ + P +V
Sbjct: 264 ---PVQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQV- 317
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSG 330
L I+A +++ G L+ WG + GD P + L+G
Sbjct: 318 -----QGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTG 372
Query: 331 WNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + +G ++ D + +WG ++G+LG G ++ + P +V L G V ++
Sbjct: 373 --VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLT--PVQVQGLTG--VTAI 426
Query: 390 ACGYGHSL 397
A GY +++
Sbjct: 427 AAGYLYTV 434
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 144/336 (42%), Gaps = 42/336 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV +G + WG N+ GQLG G +R P V AG HTV ++D
Sbjct: 84 HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMT----GATAIAAGIYHTVAASQD 139
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N GQLG G+ P V+ L + VTA A G + + L +G ++ G
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRFSPVQVQGL-TGVTAVAAGRNHSAALG--QGGTVWTWG 196
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG GT + T P + L G ++ ++ + TVA+ G
Sbjct: 197 DNLVGQLGDGTSTQRLT--------------PVQVQGLTG--VIAISANDSETVALRQDG 240
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG G+LG + P V V V I+AG + G L+
Sbjct: 241 TVWAWGNNSSGQLGDGTTTVRFTP--VQVLGLTGV----TAIAAGGGFAVALRQDGTLWA 294
Query: 309 W-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
W G+L N Y P+ + L+G + + + +H + D + +WG+ G+
Sbjct: 295 WGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNSSGQ 352
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
LG G + + P +V L G V ++A GY +++
Sbjct: 353 LGDGTTTVRFT--PVQVQGLTG--VTAIAAGYLYTV 384
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV +A S H VA+ +G + WG N+ GQLG G +R P V
Sbjct: 1169 TPVQVQGLTGV----IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQ 1224
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ + AG HT V +DG + +G+N GQLG G+ + P V+ L + V+A
Sbjct: 1225 GLTG--VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL-TGVSA 1281
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G TV + E ++ G QLG+G+ + +T P + A
Sbjct: 1282 LAAGYAHTVVVG--EDGTVWAWGNNSGTQLGNGSSTDRST--------------PVQVEA 1325
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
L G +A G HTVA+ G + WG G++G D P V V
Sbjct: 1326 LTGA--FSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNVMV 1375
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV +AAG H V V +G + WG N QLG+G R P V
Sbjct: 1269 TPVQVQGLTGVSA--LAAGY--AHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVE 1324
Query: 106 ELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ + + AGR HTV ++ DG +G N GQ+G G+ + P+PV +V E T
Sbjct: 1325 ALTGAFSLA---AGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTAD--RPTPVNVMVQEGT 1379
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 37/283 (13%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ AG G +HT+ V +DG A+G N GQLG G+ P V ++ TA A G
Sbjct: 76 VLAAGNG-NHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV---MTGATAIAAGIY 131
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
TV ++ + ++ G GQLG GT + + P + L G +
Sbjct: 132 HTV--AASQDGTVWTWGRNSSGQLGDGTSIQ--------------RFSPVQVQGLTG--V 173
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
VA G NH+ A+ G V+TWG G+LG P +V L IS
Sbjct: 174 TAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQV------QGLTGVIAIS 227
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDSGNMHHFV 345
A + G ++ WG + GD P ++ L+G G +
Sbjct: 228 ANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTG-VTAIAAGGGFAVAL 286
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
D + +WG G+LG G S P++V L G+ I+
Sbjct: 287 RQDGTLWAWGSNSRGQLGNGT--TFGSYRPEQVQGLTGVTAIA 327
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 169/429 (39%), Gaps = 76/429 (17%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG + +L P L P + G ++R++ C H AV +G YTWG N+ GQL
Sbjct: 34 RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 92
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKH---- 139
G G + P V L +K G T V E S + W ++
Sbjct: 93 GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSD 152
Query: 140 ------GQLGSGSIRNEIEPSPV----------RCLVSEVT-ATACGADFTVWLSSVEGA 182
G + E S + RCL EV +CGA + LS E
Sbjct: 153 YPRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCGAVHVMALS--EDG 210
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNH 240
+ G +YGQLG G +E + + V AY P + IV+V+CG H
Sbjct: 211 LLQAWGYNEYGQLGRGCTSE-GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYH 263
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
T A+ G VYTWG G G+LGH + E +PRRV R + +S G V+S
Sbjct: 264 TAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHS 319
Query: 298 SCTAGGGQLYMWG----------------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
G LY WG NG D + + + ++ + G+
Sbjct: 320 CAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHS 379
Query: 342 HHFVGA-DSSCISWGHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLV 398
H V DS WG+ YG+ +KS+ P VD G V +A G GHS V
Sbjct: 380 HTLVSMKDSRIYGWGYNSYGQAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAV 434
Query: 399 IVDRTNVGE 407
+ D ++ E
Sbjct: 435 LTDACSLKE 443
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 129/268 (48%), Gaps = 18/268 (6%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ P ++ L DI V+ G V H +A+D G ++WG N GQLG+G PT
Sbjct: 122 NIARPVQINGLK--DIVQVSTGLV--HSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPT 177
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V LS +AGA H++ ++ DG A+G N+ GQLG+G P V+ L
Sbjct: 178 KVEFLSNIVAIEAGA--EHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNL-EN 234
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ A G + ++ L +GA I G GQ+G G+ N Y KD ++ + P
Sbjct: 235 IEMIAGGDNHSLALDH-DGA-IWAWGYNSNGQIGDGSSNVYE-KDGQLR-EKRNKTEPVK 290
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L G+ + +V+ G H+ A+ G VY WG+ YG+LG+ KD VP RNN
Sbjct: 291 LNGLYGK-VKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVPL------RNN 343
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V I GS +S G +Y WG
Sbjct: 344 VGRSIIDIETGSYHSFAVDESGVIYAWG 371
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 44/327 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G + WG N +G++ G K RP ++ L I + G H++ + +
Sbjct: 95 HTLAITKHGTVWGWGYNSKGEITEGGK-NIARPVQINGLKD--IVQVSTGLVHSLALDQS 151
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G ++G N +GQLG+G+ ++ P+ V L S + A GA+ ++ LS+ + G
Sbjct: 152 GAVWSWGENIYGQLGNGTNQDSSIPTKVEFL-SNIVAIEAGAEHSLALSN--DGKVWAWG 208
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
++GQLG+G + N PR + L E I +A G NH++A+D G
Sbjct: 209 RNEFGQLGNGETEKSNI--------------PRLVKNL--ENIEMIAGGDNHSLALDHDG 252
Query: 249 YVYTWGFGGYGRLGH------------REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
++ WG+ G++G RE++++ P ++ N + +SAG +
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKL-----NGLYGKVKQVSAGIKH 307
Query: 297 SSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
S+ G++Y WG + NG PL + G ++ +++G+ H F +S I
Sbjct: 308 STALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNVGRSIIDIETGSYHSFAVDESGVI 367
Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKV 378
+WG A YG+LG G +G+ + + V
Sbjct: 368 YAWGDATYGQLGDGTFGKDGNRITYMV 394
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 36/228 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ L + VA + H +A+ +G+ + WGRNE GQLG+G+ + + P +V
Sbjct: 176 PTKVEFLSNI----VAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKN 231
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI------------RNEIEPS 154
L I+ G +H++ + DG A+G+N +GQ+G GS RN+ EP
Sbjct: 232 LEN--IEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPV 289
Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ L +V + G + L+ E + G +YGQLG+G+ KDS V L
Sbjct: 290 KLNGLYGKVKQVSAGIKHSTALT--ENGEVYAWGWNEYGQLGNGS-----MKDSKVPLRN 342
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
G +I+ + G+ H+ AVD G +Y WG YG+LG
Sbjct: 343 NV-----------GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLG 379
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG------------DKIQRDRPTIV 104
+I +A G H +A+D +G + WG N GQ+G G +K + P +
Sbjct: 234 NIEMIAGG--DNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKL 291
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
+ L K+K+ AG H+ +TE+G A+GWN++GQLG+GS+++ P+R V +
Sbjct: 292 NGLYG-KVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKD--SKVPLRNNVGRSI 348
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
G+ + + E I G YGQLG GT KD + ++ Y + P I
Sbjct: 349 IDIETGSYHS--FAVDESGVIYAWGDATYGQLGDGTFG----KDGN-RITYMVRMNPIVI 401
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 42/304 (13%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG + ++ DG G N GQLG+G+ ++ V L +V + D T L
Sbjct: 41 AGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY-DVVSLDSDMDHT--L 97
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + ++ G G++ G N RP I L + IV+V+
Sbjct: 98 AITKHGTVWGWGYNSKGEITEGGKN---------------IARPVQINGL--KDIVQVST 140
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G H++A+D G V++WG YG+LG+ +D +P +V+ F N V I AG+ +
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVE-FLSNIV-----AIEAGAEH 194
Query: 297 SSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
S + G+++ WG+ + NG+ P + + N+ + G+ H + D +
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLALDHDGAI 254
Query: 352 ISWGHAQYGELG------YGPYGQ----KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG+ G++G Y GQ ++ P K++ L G V V+ G HS + +
Sbjct: 255 WAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG-KVKQVSAGIKHSTALTE 313
Query: 402 RTNV 405
V
Sbjct: 314 NGEV 317
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 54/263 (20%)
Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+N S V +T +D TVW + G GQLG+GT+ KD
Sbjct: 29 KNSESTSVVSINAGGYVSTILRSDGTVWTT----------GRNNVGQLGNGTE-----KD 73
Query: 208 SS----VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
SS V Y+ +V + +HT+A+ G V+ WG+ G +
Sbjct: 74 SSYFGKVDELYD---------------VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITE 118
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGD 317
+ + R V + N L +S G V+S G ++ W G+L N
Sbjct: 119 GGKN---IARPVQI----NGLKDIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQ 171
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
D P + LS N+ +++G H + D +WG ++G+LG G + S +P+
Sbjct: 172 DSSIPTKVEFLS--NIVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGE--TEKSNIPR 227
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
V LE + +I A G HSL +
Sbjct: 228 LVKNLENIEMI--AGGDNHSLAL 248
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 137/306 (44%), Gaps = 58/306 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G ++ +A G H VA+ +G +TWG N GQLG R P VS
Sbjct: 747 PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 802
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + AG +H++ + DG AFG+N +GQLG G+ ++ P V+ L + V A
Sbjct: 803 LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDL-TGVVAI 859
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
A G DF++ L S ++ + G YG+LG+GT T SSV + +AIAA
Sbjct: 860 AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 912
Query: 226 ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
+G T +K +A G HT+A+ S G
Sbjct: 913 DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 972
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V++WG+ GYG+LG+ VP + L A I+AG S G LY
Sbjct: 973 TVWSWGYNGYGQLGNGNNTSRSVPAAIP------GLASIASIAAGENQSIAYGNDGILYS 1026
Query: 309 WGKLKN 314
WG+ N
Sbjct: 1027 WGRNAN 1032
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A + H + + +G + WG N GQLG G P V L+ +K G +
Sbjct: 707 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 764
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HTV + DG +G+N +GQLG S P V L + TA + G + ++ L S
Sbjct: 765 HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 821
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G YGQLG GT +Q P + L G +V +A G +
Sbjct: 822 DGTVWAFGYNGYGQLGDGTT--------------SSQRTPVQVKDLTG--VVAIAAGKDF 865
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++A+ S G V++WG YG LG+ VP +V +L I+AG +
Sbjct: 866 SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 919
Query: 301 AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
G ++ WG N N P+ ++G ++ + +G H + +D + SW
Sbjct: 920 KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 977
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ YG+LG G S ++P + L + S+A G S+
Sbjct: 978 GYNGYGQLGNG--NNTSRSVPAAIPGLA--SIASIAAGENQSI 1016
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV VA +A+ +G ++WG+N G+LG+G + P V+
Sbjct: 846 TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 901
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ +K AG H V + +DG+ A+G+N +G+LG+ S ++ +PV+ V+ +
Sbjct: 902 LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 957
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T+ L S ++ + G YGQLG+G N SV P AI
Sbjct: 958 IAAGPYHTLALKS--DGTVWSWGYNGYGQLGNG-----NNTSRSV---------PAAIPG 1001
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
LA +I +A G N ++A + G +Y+WG G+LG+ D VP +V
Sbjct: 1002 LA--SIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1049
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 190 PQYGQLGHGTDNEYN----TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
P + G + Y KD++ + + P +A G + V+ NHT+ +
Sbjct: 661 PSFTVTGLSPNTSYTFTVKAKDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIK 720
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
S G V+ WG+ G+G+LG VP +V L +I+ G ++ G
Sbjct: 721 SDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGT 774
Query: 306 LYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L+ W G+L ++ Y P + L+ W + +G H + +D + ++G+
Sbjct: 775 LHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNG 832
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G S P +V L G V+++A G SL +
Sbjct: 833 YGQLGDGT--TSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 869
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 136/306 (44%), Gaps = 58/306 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G ++ +A G H VA+ +G +TWG N GQLG R P VS
Sbjct: 732 PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 787
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ + AG +H++ + DG AFG+N +GQLG G+ ++ P V+ L + V A
Sbjct: 788 LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDL-TGVVAI 844
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
A G DF++ L S ++ + G YG+LG+GT T SSV + +AIAA
Sbjct: 845 AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 897
Query: 226 ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
+G T +K +A G HT+A+ S G
Sbjct: 898 DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 957
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V++WG+ GYG+LG VP + L A I+AG S G LY
Sbjct: 958 TVWSWGYNGYGQLGSGNNTSRSVPAAIP------GLASMASIAAGENQSIAYGNDGILYS 1011
Query: 309 WGKLKN 314
WG+ N
Sbjct: 1012 WGRNAN 1017
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A + H + + +G + WG N GQLG G P V L+ +K G +
Sbjct: 692 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 749
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HTV + DG +G+N +GQLG S P V L + TA + G + ++ L S
Sbjct: 750 HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 806
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G YGQLG GT +Q P + L G +V +A G +
Sbjct: 807 DGTVWAFGYNGYGQLGDGTT--------------SSQRTPVQVKDLTG--VVAIAAGKDF 850
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++A+ S G V++WG YG LG+ VP +V +L I+AG +
Sbjct: 851 SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 904
Query: 301 AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
G ++ WG N N P+ ++G ++ + +G H + +D + SW
Sbjct: 905 KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 962
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ YG+LG G S ++P + L M S+A G S+
Sbjct: 963 GYNGYGQLGSG--NNTSRSVPAAIPGLASMA--SIAAGENQSI 1001
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 26/230 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +++ L GV VA +A+ +G ++WG+N G+LG+G + P V+
Sbjct: 831 TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 886
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ +K AG H V + +DG+ A+G+N +G+LG+ S ++ +PV+ V+ +
Sbjct: 887 LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 942
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T+ L S ++ + G YGQLG G N SV P AI
Sbjct: 943 IAAGPYHTLALKS--DGTVWSWGYNGYGQLGSG-----NNTSRSV---------PAAIPG 986
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
LA ++ +A G N ++A + G +Y+WG G+LG+ D VP +V
Sbjct: 987 LA--SMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1034
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 190 PQYGQLGHGTDNEYN----TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
P + G + Y KD++ + + P +A G + V+ NHT+ +
Sbjct: 646 PSFTVTGLSPNTSYTFTVKAKDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIK 705
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
S G V+ WG+ G+G+LG VP +V L +I+ G ++ G
Sbjct: 706 SDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGT 759
Query: 306 LYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L+ W G+L ++ Y P + L+ W + +G H + +D + ++G+
Sbjct: 760 LHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNG 817
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G S P +V L G V+++A G SL +
Sbjct: 818 YGQLGDGT--TSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 854
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 26/271 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT ++ G+ + +A C H +AV + +WG N GQLG GD++ R PT +S
Sbjct: 131 PTLIKQ--GLIVSMIA--CGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPIS 186
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
LS+ AG H+ V+++ G +FG G+LG G+ P P+ LV +
Sbjct: 187 GLSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIV 246
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ A G + + S +GA + G +YGQLG GT + P
Sbjct: 247 SVAAGLMHSAAVDS-QGA-LYTWGWNRYGQLGLGT--------------VKKHTLPNKNK 290
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
L IVKV CG NHT+ +D G+VY++GF G+LG D P R+D+ + N
Sbjct: 291 ELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQN-- 348
Query: 285 PPEAV-ISAGSVNSSCTAGGGQLYMWGKLKN 314
E + I+AG + G +Y +G + +
Sbjct: 349 -DEIIDIAAGYYHVLLLTKKGCVYSFGYISD 378
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 124/267 (46%), Gaps = 39/267 (14%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+P + LVG I VAAG + H AVD +G YTWG N GQLG G + P
Sbjct: 232 FNPRPISTLVGKHIVSVAAGLM--HSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKN 289
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---S 161
EL ++ I K G++HT+V+ +G+ +FG+N GQLG GS + I+P+ + +
Sbjct: 290 KELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND 349
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG----------------TDNEYNT 205
E+ A G + V L + +G + + G G LG G ++E+N
Sbjct: 350 EIIDIAAGY-YHVLLLTKKGC-VYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFND 407
Query: 206 KDSSVKLAY----------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
S K Y + P+ + G+ VK+A G H+ + S G
Sbjct: 408 SIDSYKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGR 467
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVD 276
+YT+G G RLG+ Q+D+ +P V+
Sbjct: 468 LYTFGLGDNFRLGNNCQEDQDMPCIVN 494
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 134/350 (38%), Gaps = 91/350 (26%)
Query: 77 GRCYTWGRNERGQLG------------HGDKIQRD----------RPTIVSELSKYKIKK 114
G+ Y+WG N GQ + + D PT++ + +
Sbjct: 85 GQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIKQ--GLIVSM 142
Query: 115 AGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADF 172
G SH + V+ D L++G N+ GQLG G N P+P+ L + A G+
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGSQH 202
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ LS + + G +G+LGHG NE + + PR I+ L G+ IV
Sbjct: 203 SFVLSKF--GELFSFGCGTFGRLGHG--NELPSFN------------PRPISTLVGKHIV 246
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
VA G H+ AVDS+G +YTWG+ YG+LG K +P + +R N++ +
Sbjct: 247 SVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVK----VVC 302
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
G ++ G +Y
Sbjct: 303 GKNHTLVLDVNGHVY--------------------------------------------- 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S+G G+LG G Y +D+ + +I +A GY H L++ +
Sbjct: 318 SFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKK 367
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N PT + L FVAAG S H + G +++G G+LGHG+++ P
Sbjct: 178 NRCHPTPISGLSQSIPVFVAAG--SQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPR 235
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+S L I AG H+ V G +GWN++GQLG G+++ P+ + L
Sbjct: 236 PISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF 295
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ CG + T+ L V G + + G GQLG G+ + S+K P
Sbjct: 296 NIVKVVCGKNHTLVL-DVNG-HVYSFGFNVCGQLGIGSYTD------SIK------PNRI 341
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ + I+ +A G H + + KG VY++G+ G LG
Sbjct: 342 DLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALG 382
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A C H V V +G ++WG G+LGHG +P ++
Sbjct: 299 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 417 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHG-------DKKSVFI-------PREVD 460
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G GRLGH ++ + VP
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N+ D P +
Sbjct: 521 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEG 576
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 634
Query: 386 VISVACGYGHSLVI 399
V S+ACG + +
Sbjct: 635 VKSIACGTNFTAAV 648
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 306 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 349
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P+ I AL I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 350 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 409
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 410 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 435
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 436 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 479
Query: 399 IVD 401
+V+
Sbjct: 480 VVE 482
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 37/312 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
++ G H V+VT+ G S ++G G+LG G N +P + L + + ACG
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 368
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F ++ G + G +G LGHG + + P+ R L G
Sbjct: 369 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 414
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
+ +ACG HT V S G ++T+G G +G LGH ++K ++PR VD + V V
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 474
Query: 290 ISAGSV-------NSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCM 336
+V +SS G+L+ W G+L + N + + P + L N C
Sbjct: 475 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF-CQ 533
Query: 337 DSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGY 393
+ V +S + G YG+LG +P +V+ L V +ACG
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLG---NSHADGKLPNRVEGKLHKSFVEEIACGA 590
Query: 394 GHSLVIVDRTNV 405
H V+ RT V
Sbjct: 591 YHVAVLTSRTEV 602
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 39/215 (18%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++G+LGHG+K + PT V+
Sbjct: 465 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 524
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G S TV +T G+ G +GQLG+ G + N +E + V
Sbjct: 525 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVE 584
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ ACGA L+S + G G+LGHG ++ N+ P
Sbjct: 585 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 625
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ +L + + +ACGTN T AV ++ W G
Sbjct: 626 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 656
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 171/430 (39%), Gaps = 78/430 (18%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG + +L P L P + G ++R++ C H AV +G YTWG N+ GQL
Sbjct: 110 RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 168
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKH---- 139
G G + P V L +K G T V E S + W ++
Sbjct: 169 GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSD 228
Query: 140 ------GQLGSGSIRNEIEPSPV----------RCLVSEVT-ATACGADFTVWLSSVEGA 182
G + E S + RCL EV +CGA + LS E
Sbjct: 229 YPRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCGAVHVMALS--EDG 286
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNH 240
+ G +YGQLG G +E + + V AY P + IV+V+CG H
Sbjct: 287 LLQAWGYNEYGQLGRGCTSE-GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYH 339
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
T A+ G VYTWG G G+LGH + E +PRRV R + +S G V+S
Sbjct: 340 TAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHS 395
Query: 298 SCTAGGGQLYMWG----------------KLKNNGDDWMYPK-PLMDLSGWNLRCMDSGN 340
G LY WG NG D + P++ + ++ + G+
Sbjct: 396 CAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPS-GVQLVTCGH 454
Query: 341 MHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSL 397
H V DS WG+ YG+ +KS+ P VD G V +A G GHS
Sbjct: 455 SHTLVSMKDSRIYGWGYNSYGQAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSA 509
Query: 398 VIVDRTNVGE 407
V+ D ++ E
Sbjct: 510 VLTDACSLKE 519
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P + +++ G HT+ +T G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67
Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+ QLG + R ++ P ++ +++ CG+ ++ LS + +L+ G GQL
Sbjct: 68 DYSQLGHDLPTKRPQLIPELQDYVIIQIS---CGSRHSLALS--DWGQVLSWGDNDCGQL 122
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH T+ E V+L P+ + L +T+V++ACG NH++A+ S G +Y+WG
Sbjct: 123 GHATEKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169
Query: 256 GGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
YG+LG D P R+ + P A I+ G +S + G ++ WG+
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYG 365
N+ + YP L L +R + G+ F+ + + G YG+LG+G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 286 --FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
P +R LV + V C + H +A+ G Y+WG N GQLG D + P
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLR 191
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
++ L + G +H+ ++++ G +G N GQLG N P+ ++ L +
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG +F+V+L++ G AG YGQLGHG + + PR
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN--------------EMLPRM 295
Query: 223 IAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L G TI +VACG HT+A V S+G VY +G G G+LG R K +P+ V
Sbjct: 296 VMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 35/370 (9%)
Query: 20 GELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G+ L+C GST +G G D +++P ++ ++ VA G H + + G+
Sbjct: 4 GKELYCWGSTSHGQLGL-GGIEDEQILTPRQIPWTPDTAVQQVACG--HRHTLFLTATGK 60
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y G N+ QLGH + RP ++ EL Y I + G H++ +++ G L++G N
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 139 HGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG + + ++ P VR LVS+ V ACG + ++ L+S + + G YGQLG
Sbjct: 119 CGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLG 176
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ N+ + P + L G + +ACG NH+ + G V+ WG
Sbjct: 177 VNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGK 311
G+LG ++ + P ++ + V ++ G S G ++ +G+
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 312 LKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYG 368
L + + M P+ +M+L G + + GN H S ++G G+L G
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQL--GTRS 339
Query: 369 QKSSAMPKKV 378
KS +P+ V
Sbjct: 340 TKSLMLPQVV 349
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 28/283 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ G YT G N RGQLG G T+V EL+ ++ G HT +V ++
Sbjct: 132 HLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDN 191
Query: 129 GNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
G+ A G N +GQLG G RN E+ P PV V A ACG +T+ AS+ +
Sbjct: 192 GDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTI-------ASLRD 244
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G+ +G+ HG +T + + A P R + + +++CG +HT V
Sbjct: 245 GGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLV-------VPQLSCGYHHTAVVTE 297
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G VYT+G YG+LG + P RV+ R + ++ G ++ + G++
Sbjct: 298 DGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRI----TQVACGCYHTLVLSDDGKV 353
Query: 307 YMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMH 342
+ +G+ N+G D + P+ + L + + +G H
Sbjct: 354 FPFGR-NNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYH 395
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 146/350 (41%), Gaps = 47/350 (13%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKKAGAGRSHTVVVTED 128
++VEG Y++G+N G+L GD R P V + ++ G T ++ ED
Sbjct: 27 VLEVEG-VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFED 85
Query: 129 GNSLAFGWNKHGQLGSGSIRN--EIEPSPVRCLVSEVTATACGADFTVWLSSVEG-ASIL 185
G+ G+N GQ G+ + SP L S T + + L+++ ++
Sbjct: 86 GDVYTCGYNDSGQCAIGTTERVPTLRFSP--GLSSNRTVRIFSGNGSEHLAALHANGNLY 143
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLG G+ +T L E LAG+ + V C HT V
Sbjct: 144 TVGFNMRGQLGLGS----STTVMEATLVEE----------LAGKRVADVGCSYFHTAIVM 189
Query: 246 SKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G +Y G YG+LG + ++ E VPR V+ F R VL ++ G + + G
Sbjct: 190 DNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVL----AVACGQHYTIASLRDG 245
Query: 305 QLYMWGK-------LKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
+ +GK L + + P PL L L C HH V D +
Sbjct: 246 GVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSC----GYHHTAVVTEDGAV 301
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++G YG+LG G + A P +V+ L M + VACG H+LV+ D
Sbjct: 302 YTFGRNDYGQLGLG--HKMHMARPARVESLARMRITQVACGCYHTLVLSD 349
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V +G YT+GRN+ GQLG G K+ RP V L++ +I + G HT
Sbjct: 285 LSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHT 344
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
+V+++DG FG N HGQLG + + + P + L ++ VT A G +V L
Sbjct: 345 LVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCL 399
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P R+ L + I VA GC H + + +G+ + +GRN GQLG + P
Sbjct: 319 HMARPARVESLARMRITQVACGCY--HTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQ 376
Query: 103 IVSELSKYKIKKAGAGRSHTVVVT 126
++S L + K AG H+V +
Sbjct: 377 LISTLRNKTVTKVAAGFYHSVCLV 400
>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
Length = 12743
Score = 105 bits (263), Expect = 4e-20, Method: Composition-based stats.
Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 33/331 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-------IKKAGAGRSH 121
H +A+D + R + WG N GQLG G + ++LS+ + I AG H
Sbjct: 12260 HVLALDDKNRVWGWGMNWSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGH 12319
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--LVSEVTATACGADFTVWLSSV 179
++ + G A+G N GQLG+ + + + P V L A D+
Sbjct: 12320 SLALDSLGRVWAWGSNSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDY------- 12372
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
N L + GQL DN Y + +Y P +AL+ +V G
Sbjct: 12373 -----FNMALDESGQLWAWGDNRYGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAY 12427
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H +A+D G V+ WG YG+LG+ + VP +V++ V + G+ S
Sbjct: 12428 HVLALDDAGQVWAWGNNSYGQLGNGSTANSLVPVKVNLSALEGV--GVQSVEVGNRYSML 12485
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWN---LRCMDSGNMHHFVGADSS- 350
G+++ W G L +Y L+D S +N + +D+GN H + D S
Sbjct: 12486 LDKLGRIWTWGYNDYGSLGTGNRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESN 12545
Query: 351 -CISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+WG+ YGE+G G Y +P ++ +
Sbjct: 12546 NVWTWGYGGYGEMGNGSYSNSLLPIPVRIPV 12576
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 38/308 (12%)
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLG--SGSIRNEIEPSPVRCLVSEVTATAC 168
+K G + ++V GN+L ++G N + LG SI +P + +
Sbjct: 12197 VKPFSVGSNFSLVAV--GNTLWSWGNNGYASLGVSDTSIYQRSKPGLANISAIQPASIIS 12254
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
A + L+ + + G+ GQLG GT + N + + VK +Q R +A
Sbjct: 12255 LASYYHVLALDDKNRVWGWGMNWSGQLGDGTYD--NNRYAPVKTDL-SQLRSMEDSA--- 12308
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
I+ ++ G H++A+DS G V+ WG G+LG + VP VD L P A
Sbjct: 12309 -DIIAISAGYGHSLALDSLGRVWAWGSNSSGQLGTNNTQRSLVPILVD-------LSPLA 12360
Query: 289 VISAGSVNSS-----CTAGGGQLYMWG-----KLKNNGD-DWMYPKPLMD---LSGWNLR 334
+ ++ GQL+ WG +L N ++Y D LS +
Sbjct: 12361 GAKVVAAKATDYFNMALDESGQLWAWGDNRYGRLGNGSSGSYLYLPTATDQSALSSNKVV 12420
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVAC 391
D G H D+ + +WG+ YG+LG G +S +P KV++ LEG+ V SV
Sbjct: 12421 DFDIGAYHVLALDDAGQVWAWGNNSYGQLGNG--STANSLVPVKVNLSALEGVGVQSVEV 12478
Query: 392 GYGHSLVI 399
G +S+++
Sbjct: 12479 GNRYSMLL 12486
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 192 YGQLGHGTDNEYNTKDSSV-KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ + GT SS+ K Y + P A A L G + +VA T H +A+D +G +
Sbjct: 11306 WATMATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKL 11365
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++WG YG+LG+ D P D ++NV A ++ G S G ++ WG
Sbjct: 11366 WSWGKNTYGQLGNGSYDDITAPLTQDFSGKDNV--GLASVAVGEQFSIAIDNLGDVWSWG 11423
Query: 311 KLKNNGD------DWMYPKPL 325
N+G+ DW P P+
Sbjct: 11424 -FNNSGELGQGHSDWAVPIPV 11443
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP--SPVRCLV-SEVTATACGADFTV 174
GR HT++ D A+G N +G+LG G+ +++ P + + L + + A A G F++
Sbjct: 10943 GRYHTLLWAND-ILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAFSL 11001
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + + + GL YGQLG G+ + + ++P+ ++ L G IV +
Sbjct: 11002 ALD--DRGRLWSWGLNNYGQLGIGSTSAF------------SRPQEVDLSNLMGFRIVNI 11047
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
++ A+D G V++WG G+LG ++ VP VD+
Sbjct: 11048 VAADHYAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDL 11090
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--S 105
T + L G I +AAG +A+D GR ++WG N GQLG G RP V S
Sbjct: 10980 TDISALDGASINALAAG--DAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLS 11037
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
L ++I A + + E+GN ++G N GQLG N++ P V
Sbjct: 11038 NLMGFRIVNIVAADHYAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAV 11088
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTIVSELSKYKIKKAGAGRSHTVVVTE 127
+A+D +G+ + WG N+RGQLG I R P +S L +IK A ++ E
Sbjct: 11790 LALDDKGQLWAWGINDRGQLGVASTIYRSTIPVPADMSALGGTRIKTLQAAGDQGYLLDE 11849
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACGADFTVWLSSVEGA 182
G A+G G S E +PV+ ++EV+ + G ++ + L
Sbjct: 11850 LGRLWAWGARVGDWTGMDS---ESAYAPVQVDLAEVSGGKALQMSAGNNYLLMLDENNQV 11906
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+L Y D E N+ + + +++L ++ + ++ G++H +
Sbjct: 11907 WVLGNAN-NYSASSSSADGENNSDNPFLNRV--------DLSSLGDKSAISISAGSHHDL 11957
Query: 243 AVDSKGYVYTWGFGGYGRLG 262
+D +G +++WG+ G LG
Sbjct: 11958 LLDDEGGIWSWGYNYNGELG 11977
Score = 49.3 bits (116), Expect = 0.005, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPT 102
V P L GV + VA + H +A+D +G+ ++WG+N GQLG+G D I
Sbjct: 11333 VEPVAYAQLDGVALSRVATN--TAHNLAIDGQGKLWSWGKNTYGQLGNGSYDDITAPLTQ 11390
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
S + G ++ + G+ ++G+N G+LG G
Sbjct: 11391 DFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG 11433
Score = 43.9 bits (102), Expect = 0.19, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 80 YTWGRNERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WGRN G+LG G+ + P T +S L I AG + ++ + + G ++G N
Sbjct: 10956 WAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAFSLALDDRGRLWSWGLN 11015
Query: 138 KHGQLGSGSIRNEIEPSPV 156
+GQLG GS P V
Sbjct: 11016 NYGQLGIGSTSAFSRPQEV 11034
Score = 41.6 bits (96), Expect = 0.97, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
H +A+D +GR + WG N GQLG+G D Q +P + I AG ++ +
Sbjct: 11734 HYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIVAIAAGEGFSLALD 11793
Query: 127 EDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
+ G A+G N GQLG S R+ I PV +S + T + +++ A
Sbjct: 11794 DKGQLWAWGINDRGQLGVASTIYRSTI---PVPADMSALGGTR--------IKTLQAAGD 11842
Query: 185 LNAGLPQYGQLGH--GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
L + G+L ++ DS A P +A ++G ++++ G N+ +
Sbjct: 11843 QGYLLDELGRLWAWGARVGDWTGMDSESAYA----PVQVDLAEVSGGKALQMSAGNNYLL 11898
Query: 243 AVDSKGYVYTWG 254
+D V+ G
Sbjct: 11899 MLDENNQVWVLG 11910
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I+AL G +I +A G ++A+D +G +++WG YG+LG P+ VD+ +N
Sbjct: 10982 ISALDGASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDL---SN 11038
Query: 283 VLPPEAV-ISAGSVNSSCTAGGGQLYMWGK 311
++ V I A + G ++ WG+
Sbjct: 11039 LMGFRIVNIVAADHYAFALDENGNVWSWGR 11068
Score = 39.7 bits (91), Expect = 4.4, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G HT+ + + ++ WG G LG +D++ P D+ + ++AG
Sbjct: 10941 AVGRYHTL-LWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGA--SINALAAGD 10997
Query: 295 VNSSCTAGGGQLYMWGKLKNNG-----DDWMYPKP----LMDLSGWNLRCMDSGNMHHF- 344
S G+L+ WG L N G + +P L +L G+ + + + + + F
Sbjct: 10998 AFSLALDDRGRLWSWG-LNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFA 11056
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + + SWG G+LG G + M + +L G +VIS+
Sbjct: 11057 LDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGGANVISM 11101
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 166/382 (43%), Gaps = 53/382 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D++ ++ G S H +G +TWG G+LGHG RP
Sbjct: 241 DVLIPKPLESDVVLDVQQISCG--SRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPK 298
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ ++ G HT VT G+ +G + G LG G + P P+
Sbjct: 299 LVESLAVSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPL 358
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG+ W S++ +S + G +G LGHG N N +AY
Sbjct: 359 EGL--QVLSVACGS----WHSALAMSSGKVFTFGDGTFGALGHG--NREN-------VAY 403
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY----------VYTWGFGGYGRLGHR 264
P+ + +L+G +KVACG H+ A+ ++TWG G RLGH
Sbjct: 404 -----PKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHG 458
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW 319
+++ VP V NN ++ G + A G ++ +G+L N D
Sbjct: 459 DKEARLVPTVVQALVDNNF----HQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADG 514
Query: 320 MYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D LS + + G+ H + + S +WG G LG+G G + P
Sbjct: 515 KQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHG--GIEDKKKPTI 572
Query: 378 VDILEGMHVISVACGYGHSLVI 399
VD L+ HV S+ACG + I
Sbjct: 573 VDALKDRHVKSIACGSNFTTCI 594
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + +++CG+ H +G V+TWG GRLGH +D P+ V+
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLA 304
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
+NV I+ G ++ G LY WG N W+ + L G
Sbjct: 305 VSNV----EYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG 360
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G +++ A PK+V+ L G + V
Sbjct: 361 LQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKEVESLSGFRTMKV 418
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ T+
Sbjct: 419 ACGVWHSAAIVETTS 433
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF----QRNNVLPPEAVISAGSVNSSC 299
++S G VY WG + + E V + DV ++V+ IS GS + +
Sbjct: 210 IESLGDVYVWG-EVWTDVIPSEGSSNLVCSKTDVLIPKPLESDVVLDVQQISCGSRHIAL 268
Query: 300 TAGGGQLYMWG-----KLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
T G+++ WG +L + D D PK + L+ N+ + G H V A
Sbjct: 269 TTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDLY 328
Query: 353 SWGHAQY--GELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLV 398
+WG Y G LG+G S +PK+V LEG+ V+SVACG HS +
Sbjct: 329 NWGDGSYNAGLLGHGIGA--SHWLPKRVSGPLEGLQVLSVACGSWHSAL 375
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 42 GNLVSPTRLRPLVGVDIRFVA-AGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD 99
G+ S TR P+ G++ + C + H +A + G + WG N GQLG + ++
Sbjct: 67 GHCRSRTRAEPVDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP 126
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVRC 158
P +V L+ ++ + GRSH++ +T G +G N HGQLG GS E +P V+
Sbjct: 127 TPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKL 186
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ +CGADF+ + ++ G +GQLG G +T D +
Sbjct: 187 LQGIPISHISCGADFS--FAVTPSGAVYGWGKNSFGQLGLG-----DTTD---------R 230
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P+P + +L + + + CG +HT A+ G V+T+G G YG+LGH +E +PR+V
Sbjct: 231 PQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKV 288
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGR 119
V C H +A+ G Y WG N GQLG G +P +V L I G
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGA 199
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSS 178
+ VT G +G N GQLG G + +P+ ++ L VT CG D T L+
Sbjct: 200 DFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTR 259
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G AG+ YGQLGH T + PR + L G T+ ++ CG
Sbjct: 260 DGGVFTFGAGM--YGQLGHCTSAN--------------EMLPRKVLELMGTTVTQICCGR 303
Query: 239 NHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
HT+A V SKG +Y +G GG G+LG + + P+ V
Sbjct: 304 CHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
I + G G +HT++V +DG +FG N +GQLG R E PV L +T ACGA
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAE--PVDGLEAHNITQVACGA 93
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T L+ E + G GQLG N ++S + P P+ + +LA +
Sbjct: 94 QHT--LAQNEWGEVFAWGSNSNGQLG------LNVEESMM-------PTPKMVKSLATKQ 138
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAV 289
+V++ACG +H++A+ + G +Y WG +G+LG E P V + Q P +
Sbjct: 139 VVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQG----IPISH 194
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHH 343
IS G+ S G +Y WGK GD P+P L L + + G M H
Sbjct: 195 ISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCG-MDH 253
Query: 344 FVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
D ++G YG+LG+ + +P+KV L G V + CG H+L V
Sbjct: 254 TAALTRDGGVFTFGAGMYGQLGHC--TSANEMLPRKVLELMGTTVTQICCGRCHTLAFV 310
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I ++ G + AV G Y WG+N GQLG GD R +PT +
Sbjct: 181 PCLVKLLQGIPISHISCG--ADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKS 238
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L ++ G HT +T DG FG +GQLG + NE+ P V L+ + VT
Sbjct: 239 LRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQ 298
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLG 196
CG T+ +G I GL GQLG
Sbjct: 299 ICCGRCHTLAFVPSKG-RIYAFGLGGSGQLG 328
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PRA + IV+V CG NHT+ V G ++++G YG+LGH + P VD +
Sbjct: 25 PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLM--DLSGWN 332
+N+ ++ G+ ++ G+++ W G+L N ++ M P P M L+
Sbjct: 83 AHNI----TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQ 138
Query: 333 LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H + I WG +G+LG G G + P V +L+G+ + ++C
Sbjct: 139 VVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETK-PCLVKLLQGIPISHISC 197
Query: 392 GYGHSLVI 399
G S +
Sbjct: 198 GADFSFAV 205
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 150/342 (43%), Gaps = 31/342 (9%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G WG N QLG G R P V + I AG+ H++ VT G LA+G
Sbjct: 59 PGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWG 118
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG G+ P V + VTA A G ++ ++S ++L GL GQ
Sbjct: 119 ANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTST--GTVLAWGLNVTGQ 176
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
L GT T +SS + + AG T+ VA G H++A+ S G V WG
Sbjct: 177 LYDGT----TTTNSSTPIVVDLP---------AGTTVTAVAAGNAHSLALTSAGTVLAWG 223
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--L 312
G+LG P VD+ + A S+ S+ + T G + WG
Sbjct: 224 ANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTST---GTMLAWGANFT 280
Query: 313 KNNGDDWMYPK--PL-MDL-SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
GD + + P+ +DL +G + + +G+ H V + + ++WG G+LG G
Sbjct: 281 GQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDG-- 338
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
SS+ P VD+ G V +VA G GHSL + T+ G L
Sbjct: 339 STTSSSTPVAVDLPAGTTVTAVAGGAGHSLAL---TSTGTML 377
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 140/351 (39%), Gaps = 30/351 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I VAAG H +AV G WG N GQLG G R P V + + A
Sbjct: 95 ITAVAAG--QGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAA 152
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G H++ VT G LA+G N GQL G+ V L + T TA A L+
Sbjct: 153 GDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLA 212
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVAC 236
++L G GQLG GT +T P A+ AG A
Sbjct: 213 LTSAGTVLAWGANSSGQLGDGTTTPRST--------------PVAVDLPAGTTISTIAAS 258
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
++H++AV S G + WG G+LG + P VD+ V ++ GS +
Sbjct: 259 SSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTV----TAVATGSGH 314
Query: 297 SSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHF-VGADS 349
S G + W G+L + +DL +G + + G H + +
Sbjct: 315 SLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTG 374
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ ++WG G+LG G +S+ P D+ + ++A G HSL +V
Sbjct: 375 TMLAWGFNTSGQLGDGTTSNRST--PIATDLPADTTITAIAGGSFHSLAVV 423
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 20/234 (8%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPT 102
L P L + + VA G S H VA+ EG+ YTWG+N RGQLG G K P
Sbjct: 105 LYLPRMLEAFCRIPVSQVACG--SRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
V LS + + AG H+ ++ G+ +G N GQLG G ++ P+ V L +
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ T+ +CG D T L+ + ++ G Q+GQLGH + + RPR
Sbjct: 223 KTTSISCGKDHTAILT--KHGTVFTFGSGQFGQLGHNSSRN--------------ELRPR 266
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+A L G + ++ACG HT+ + +Y++G +LG VP V
Sbjct: 267 LVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPV 320
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPR 273
+A PR + A + +VACG+ HTVA+ +G VYTWG G+LG ++ P+
Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMD 327
V R+ P +SAG +S + G ++ WG+ + D P +
Sbjct: 163 CV----RSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDS 218
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L+ + G H + + ++G Q+G+LG+ ++ P+ V L G V
Sbjct: 219 LNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHN--SSRNELRPRLVAELWGAKV 276
Query: 387 ISVACGYGHSLVIVDRTNV 405
+ACG H+LV+ + +
Sbjct: 277 TRIACGRYHTLVLQENNKI 295
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 181/446 (40%), Gaps = 78/446 (17%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G RK A N + P R+ L R VA C HC+AV V G+ Y WG + G
Sbjct: 64 GERKAA---NALKPVRVEGLR--HERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSA 118
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT-----EDGNSLAFGWNKHGQLGSGSIR 148
+K +S L+ ++K+ GRSH+ E+ L+ N GS
Sbjct: 119 NKEYFGMAIGLSGLNSDRMKRM-VGRSHSTYYAAGATGEELEELSRVQN------FGSFT 171
Query: 149 NEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+PSP V + V A ++ L+ + + G + QLG G + YN
Sbjct: 172 PYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLG--HRYN--- 226
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
Q P+ + L G IV CG H+V + + G+VYT+G G +G+LGH
Sbjct: 227 ---------QSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSS 277
Query: 268 DEWVPRRVDVFQRNNVLPPE----------AVISAGSVNSSCTAGGGQLYMWGKLK---- 313
DE PRRV+ ++P E I+ GS ++ G ++ WG +
Sbjct: 278 DERFPRRVEA-----LVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQ 332
Query: 314 ---NNGDDW--------------MYPKPLMD-LSGWNLRCMDSGNMHHFVGA-DSSCISW 354
N +DW P+ L G ++ + G++H+ A D S SW
Sbjct: 333 GGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSW 392
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDV 414
G YG LG+G + +PK + + G ++ A G HSL + N G L
Sbjct: 393 GWGSYGVLGHG--NHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV----NAGS--STLFA 444
Query: 415 YDGKASSQDNEEIDRNSTVPPKKGAA 440
+D K + + D + V K AA
Sbjct: 445 FDFKVALNNPRYSDVSFRVDGKTFAA 470
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 160/385 (41%), Gaps = 74/385 (19%)
Query: 83 GRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G + G+LG G D + P ++ +I+ G H++ V E G+ +G K GQ
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60
Query: 142 LGSGSIR--NEIEPSPVRCLVSE-VTATACGADFTVWLS-------------SVEGASIL 185
LG+G + N ++P V L E V A CG + + ++ VEG++
Sbjct: 61 LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA-----------------------QPRPRA 222
G G +D S Y A QP P
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L +V+VA G + ++AV S+G VY+WGF +LG + ++ VP+ V Q +
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVH 240
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNN-GDDWMYPKPLMDL-------- 328
++ + G +S + G +Y ++G+L + D +P+ + L
Sbjct: 241 IVS----ATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVE 296
Query: 329 -SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG---------YGPYGQKSSAM--- 374
+G + + G+ H +G + +WG A+YG+ G G +KS+AM
Sbjct: 297 SAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICA 356
Query: 375 -PKKVD-ILEGMHVISVACGYGHSL 397
P+ + +G H+ V+CG+ H+L
Sbjct: 357 TPRSLSGCFDGKHIAHVSCGHLHNL 381
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 97/230 (42%), Gaps = 44/230 (19%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LG G DN K A E P + G+ I VACG H++AV G VY
Sbjct: 6 GELGAGRDN---------KEALE----PILLERFRGKRIRSVACGEQHSMAVGETGDVYV 52
Query: 253 WGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYM 308
WG G+LG+ E+K + P RV+ + E V++ + C A GG+LY
Sbjct: 53 WGRAKEGQLGNGERKAANALKPVRVEGLRH------ERVVAGVCGYNHCLAVTVGGKLYQ 106
Query: 309 WGKLKNNGD---DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL--- 362
WG L + + + Y + LSG N S M VG S A EL
Sbjct: 107 WGMLHKHVEGSANKEYFGMAIGLSGLN-----SDRMKRMVGRSHSTYYAAGATGEELEEL 161
Query: 363 -------GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ PY Q S P+ V L+ + V+ VA GY SL + + V
Sbjct: 162 SRVQNFGSFTPYTQPS---PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEV 208
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 41/347 (11%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA + H +A+ G +WG N GQLG+G P VS L+ IK AG +
Sbjct: 207 VAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNN--IKSLAAGGN 264
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
H++ + DG A+G+N +GQ+G+G+ N + P V L S VTA + G + + S
Sbjct: 265 HSLALKSDGTVTAWGYNAYGQVGNGATANVLSPIAVSTL-SGVTAVSAGVSHSHAIGSSN 323
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G I GL YG LG+ NTK + + P I +G + VA G H
Sbjct: 324 GV-IWGWGLNTYGGLGN------NTKVN--------RSTPGTILLTSG--LQGVAGGAQH 366
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T+ V G V+ WG YG++G D RR+ Q + + AV +AG+ +S
Sbjct: 367 TIYVKGDGTVWAWGSNTYGQIG-----DGTPLRRLTPVQLSTLTGIIAV-AAGANHSLAL 420
Query: 301 AGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
A G ++ WG+ N+G + P + +L+G + + +G H + D +
Sbjct: 421 AANGTVFAWGR-NNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFDGTVY 477
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG G+LG + S P V LE V++++ G HSL I
Sbjct: 478 AWGRNHLGQLGDETCTDRLS--PVAVHYLE--KVVAISAGDNHSLAI 520
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 49/360 (13%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L PL D+ +AAG + H +A+ G ++WG N GQLG+G + L+
Sbjct: 150 LSPLT--DVVAIAAG--THHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTD 205
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
AGA +H++ + +G +++G N +GQLG+G+ P V L + + + A G
Sbjct: 206 AVAISAGA--AHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGL-NNIKSLAAG 262
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L S ++ G YGQ+G+G A P A++ L+G
Sbjct: 263 GNHSLALKS--DGTVTAWGYNAYGQVGNG--------------ATANVLSPIAVSTLSG- 305
Query: 230 TIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ V+ G +H+ A+ S G ++ WG YG LG+ + + P +L
Sbjct: 306 -VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRSTP--------GTILLTSG 356
Query: 289 V--ISAGSVNSSCTAGGGQLYMWGK--LKNNGDDW----MYPKPLMDLSGWNLRCMDSGN 340
+ ++ G+ ++ G G ++ WG GD + P L L+G + + +G
Sbjct: 357 LQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTG--IIAVAAGA 414
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + A+ + +WG +G+LG G +S +P +V L G ++++A G HSL +
Sbjct: 415 NHSLALAANGTVFAWGRNNHGQLGDGSTTNRS--LPTQVPNLTG--IVALAAGATHSLAL 470
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 152/358 (42%), Gaps = 40/358 (11%)
Query: 28 TCW--DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
T W +A G+ N++SP + L GV V+AG H + G + WG N
Sbjct: 276 TAWGYNAYGQVGNGATANVLSPIAVSTLSGV--TAVSAGVSHSHAIGSS-NGVIWGWGLN 332
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
G LG+ K+ R P + L ++ G HT+ V DG A+G N +GQ+G G
Sbjct: 333 TYGGLGNNTKVNRSTPGTI--LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG 390
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ + P + L + + A A GA+ ++ L++ ++ G +GQLG G+
Sbjct: 391 TPLRRLTPVQLSTL-TGIIAVAAGANHSLALAA--NGTVFAWGRNNHGQLGDGSTTN--- 444
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+ P + L G IV +A G H++A+ G VY WG G+LG
Sbjct: 445 -----------RSLPTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDET 491
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM 320
D P V ++ ISAG +S G + WG +L ++G
Sbjct: 492 CTDRLSPVAVHYLEK------VVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSG 545
Query: 321 YPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQKSSAMP 375
PL+ + G + +H + +++ +W G YG+LG G KS+ +P
Sbjct: 546 RFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVP 603
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 143/342 (41%), Gaps = 42/342 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV +G + G N G+LG+G P VS L+ + AG H++ + D
Sbjct: 7 HTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTG--VISVAAGYYHSLALKSD 64
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEG 181
G A+G N +G LG + +P V L + + A +D TVW G
Sbjct: 65 GTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWSWGYNG 124
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S L N ++ KL + Q I + + +V +A GT+HT
Sbjct: 125 NSALG-----------------NASPATQKLPAQVQQSFGGILSPLTD-VVAIAAGTHHT 166
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+ S G V++WG G+LG+ + + Q N L ISAG+ +S
Sbjct: 167 LALKSNGTVWSWGLNSSGQLGNGT-----LATQSAAVQAVN-LTDAVAISAGAAHSLALR 220
Query: 302 GGGQLYMWGKLK----NNGDDWMYPKPLMDLSGW-NLRCMDSGNMHHF-VGADSSCISWG 355
G + WG NG P + +SG N++ + +G H + +D + +WG
Sbjct: 221 ANGAVVSWGANTYGQLGNGTTTTSASP-VGVSGLNNIKSLAAGGNHSLALKSDGTVTAWG 279
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+ YG++G G S P V L G+ +S + H++
Sbjct: 280 YNAYGQVGNGATANVLS--PIAVSTLSGVTAVSAGVSHSHAI 319
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +L L G I VAAG H +A+ G + WGRN GQLG G R PT V
Sbjct: 396 LTPVQLSTLTG--IIAVAAGA--NHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ I AG +H++ + DG A+G N GQLG + + + P V L +V
Sbjct: 452 PNLT--GIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYL-EKVV 508
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A + G + + L+ + + G ++GQL ++ S + + P +
Sbjct: 509 AISAGDNHS--LAIHQNGTAFAWGSDEHGQL-------CDSGSGSGRFSPLISQIPGIVK 559
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+ +A G NHT+ +++ G + G YG+LG D+ P + L
Sbjct: 560 G------IGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPI------TTL 607
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
A ++AG S+ G + WG
Sbjct: 608 TNAARLAAGGNTSAALTTNGTVSTWG 633
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 49 RLRPL-VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL-GHGDKIQRDRPTIVSE 106
RL P+ V + VA H +A+ G + WG +E GQL G R P I
Sbjct: 495 RLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSPLISQI 554
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
K AG +HT+++ +G + A G N +GQLG G+ ++ P P+ L +
Sbjct: 555 PGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPITTL-TNAARL 613
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G + + L++ ++ GL GQLG DN ++ + + P + +
Sbjct: 614 AAGGNTSAALTT--NGTVSTWGLNSSGQLG---DNTTASRTTIAPVLRTVYPTVEVFSGV 668
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
A + GT H AV + GYV++WG G++G
Sbjct: 669 A-----SLGAGTAHLTAVKTDGYVHSWGLNDSGQIG 699
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK------- 111
R A G S A+ G TWG N GQLG D R TI L
Sbjct: 612 RLAAGGNTSA---ALTTNGTVSTWGLNSSGQLG--DNTTASRTTIAPVLRTVYPTVEVFS 666
Query: 112 -IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+ GAG +H V DG ++G N GQ+G G++ N P P L+
Sbjct: 667 GVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVN--RPLPTAALL 714
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ P V V + G + H AV +G ++WG N+ GQ+G G + R PT
Sbjct: 658 VYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLPT 710
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 IVPKKLEALCGKKIKSLSYG-SGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V + ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL ++++ CG HT+A+ +G +Y WG YG+LG + + P ++ V ++
Sbjct: 226 RVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT + FG N LG+G ++ I P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGM-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G VY WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V+S G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPCRVAALHSVCVLQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAQIMVEKERVVEIAACHSAHT 297
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 54/189 (28%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQV--- 121
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N+L + + ++ GS +S A G++Y
Sbjct: 122 -CTNLLIKQVIEVACGSHHSMALAADGEVY------------------------------ 150
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + + P+KV + L V+S+ACG S
Sbjct: 151 ---------------AWGYNNCGQVGSGSTANQPT--PRKVTNCLHIKRVVSIACGQTSS 193
Query: 397 LVIVDRTNV 405
+ ++D V
Sbjct: 194 MAVLDNGEV 202
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P +R L G+ I+ ++ C CHC+AV +E + +WGRN+ G+
Sbjct: 183 WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 240
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +IK AG H+V +TEDG+ +GW ++G LG G +
Sbjct: 241 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 300
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P V ++ +CG T+ +SS G + G +YGQLGHG
Sbjct: 301 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 348
Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
+E PR + AL+ + I +V
Sbjct: 349 ----FEDCLVPRKVQALSDKLISQV 369
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT+L G DI V+ C + + VA G+ Y+WG + G+LGHGD P +
Sbjct: 147 PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 204
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L +IK+ G H + VT + L++G N++G+LG G+ ++ P + +
Sbjct: 205 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 264
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A GA+ +V ++ E + G +YG LG G N+ +L E
Sbjct: 265 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 307
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ G+ IV V+CG HT+++ S G +YT G+ YG+LGH + +D VPR+V
Sbjct: 308 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 361
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 35/260 (13%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
+WGR E GQLGHGD R PT +S I G +TV ++ G + ++GW
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDF 186
Query: 140 GQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G + P P+R L + +++ C L+ +L+ G Q G+L
Sbjct: 187 GRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC-----LAVTMENKVLSWGRNQNGEL 241
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GT TKDS V P+ I A G I VA G H+VA+ G +Y WG+
Sbjct: 242 GLGT-----TKDSHV---------PQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 287
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLK 313
G YG LG + D +P +V++ V+ +S G ++ + G LY W K
Sbjct: 288 GRYGNLGLGDTNDRLIPEKVNIDGDKIVM-----VSCGWRHTISISSSGGLYTHGWSKYG 342
Query: 314 NNG----DDWMYPKPLMDLS 329
G +D + P+ + LS
Sbjct: 343 QLGHGDFEDCLVPRKVQALS 362
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 31/260 (11%)
Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
RN+ E PV+ V + F + V G + + G + GQLGHG +T D
Sbjct: 91 RNKEEEEPVK--VHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHG-----DTDD 143
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY-VYTWGFGGYGRLGHREQ 266
+ P ++A G+ IV V CG ++TVA G VY+WG+G +GRLGH +
Sbjct: 144 RLL---------PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDP 194
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWM 320
D ++P + Q + IS G + ++ WG+ +N D
Sbjct: 195 SDLFIPHPIRALQGLRI----KQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSH 250
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P+ ++ G ++ + +G H + D WG +YG LG G + +P+KV+
Sbjct: 251 VPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR--LIPEKVN 308
Query: 380 ILEGMHVISVACGYGHSLVI 399
I +G ++ V+CG+ H++ I
Sbjct: 309 I-DGDKIVMVSCGWRHTISI 327
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQ 191
++G + GQLG G + + P+ + ++ + CGAD+TV S G + + G
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV-ARSKSGKDVYSWGWGD 185
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+G+LGHG ++ P I AL G I +++CG H +AV + V
Sbjct: 186 FGRLGHGDPSDLFI--------------PHPIRALQGLRIKQISCGDCHCLAVTMENKVL 231
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
+WG G LG KD VP+++ F+ + +++AG+ +S G LY WG
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAEHSVAITEDGDLYGWGW 287
Query: 311 -KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
+ N G +D + P+ +++ G + + G H + + + G ++YG+LG+
Sbjct: 288 GRYGNLGLGDTNDRLIPEK-VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGH 346
Query: 365 GPYGQKSSAMPKKVDIL 381
G + + +P+KV L
Sbjct: 347 GDF--EDCLVPRKVQAL 361
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V +WG G G+LGH + D +P ++ F +++ +V + + G +Y W
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVTCGADYTVARSKSGKDVYSW 181
Query: 310 -----GKLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
G+L +GD D P P+ L G ++ + G+ H V ++ +SWG Q GE
Sbjct: 182 GWGDFGRL-GHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 240
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
LG G K S +P+K+ EG+ + VA G HS+ I +
Sbjct: 241 LGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 278
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 152/360 (42%), Gaps = 43/360 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L +++I
Sbjct: 13 VLIISAG--ASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTC 70
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ + ++GW G+LG G+ + P P++ L + ACG
Sbjct: 71 GADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHC-- 128
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + + G Q GQLG G NT+DS V P+ I A G I VA
Sbjct: 129 LAVTMDGEVQSWGRNQNGQLGLG-----NTEDSLV---------PQKIQAFEGIRIKMVA 174
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN---NVLPPEAVISA 292
G HT AV G +Y W G + G ++ D + R+ V+ P
Sbjct: 175 AGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLL 233
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN-----LRCMDSGNMHHF--V 345
S+ +Y+W + W L+ W SG H +
Sbjct: 234 WSI----------IYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPL 283
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 284 TSDGKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 39/284 (13%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L GV I+ +A C HC+AV ++G +WGRN+ GQ
Sbjct: 90 WGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 147
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN-KHGQLGSGSIR 148
LG G+ P + +IK AG HT VTEDG+ +GW+ K + G
Sbjct: 148 LGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD--LYGWDGKIWKFGISDRN 205
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ + C V +V + L S+ + + +LG N K S
Sbjct: 206 DRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRS 265
Query: 209 SVKLAYEA----------------------------------QPRPRAIAALAGETIVKV 234
+ + Q P + + +V+V
Sbjct: 266 ATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 325
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+CG HT+AV + V+ WG G G+LG E D P ++
Sbjct: 326 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEAL 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 99/254 (38%), Gaps = 75/254 (29%)
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
E+ P P + L+ + GA +V L S G + + G + GQLGHG
Sbjct: 5 EVTPPPRKVLI-----ISAGASHSVALLS--GEVVCSWGRGEDGQLGHGD---------- 47
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKD 268
E + P ++AL IV V CG +HTVA S+ VY+WG+G +GRLGH
Sbjct: 48 ----AEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGH----- 98
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
N D P P+ L
Sbjct: 99 ---------------------------------------------GNSSDLFTPLPIKAL 113
Query: 329 SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G+ H V D SWG Q G+LG G + S +P+K+ EG+ +
Sbjct: 114 HGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLG--NTEDSLVPQKIQAFEGIRIK 171
Query: 388 SVACGYGHSLVIVD 401
VA G H+ + +
Sbjct: 172 MVAAGAEHTAAVTE 185
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 40/303 (13%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
SPT+L L + + V+ C + H VA Y+WG + G+LGHG+ P +
Sbjct: 53 SPTQLSALD--EHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPI 110
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L IK+ G SH + VT DG ++G N++GQLG G+ + + P ++ +
Sbjct: 111 KALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRI 170
Query: 164 TATACGADFTV----------WLSSVEGASILNAG----LPQYGQLGHGTDNEYNTKDSS 209
A GA+ T W + I + L +Y D S
Sbjct: 171 KMVAAGAEHTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHIS 230
Query: 210 VKL-----AYEAQPRPRAIAALAGETIV-------------KVACGTNHTVAVDSKGYVY 251
L + Q P L G +++ G HT+ + S G +Y
Sbjct: 231 FLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLY 290
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
WG+ +G++G D+ P +V V+ +S G ++ ++ WG+
Sbjct: 291 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGR 346
Query: 312 LKN 314
N
Sbjct: 347 GTN 349
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W+ G+ + + SP ++R D + V C H +AV + WGR GQ
Sbjct: 294 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351
Query: 90 LGHGDKIQRDRPTIVSELS 108
LG G+ + R+ P I+ LS
Sbjct: 352 LGIGESLDRNSPNIIEALS 370
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A C H V V +G ++WG G+LGHG +P ++
Sbjct: 286 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 343
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 344 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 403
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 404 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHG-------DKKSVFI-------PREVD 447
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G GRLGH ++ + VP
Sbjct: 448 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 507
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N+ D P +
Sbjct: 508 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 563
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 621
Query: 386 VISVACGYGHSLVI 399
V S+ACG + +
Sbjct: 622 VKSIACGTNFTAAV 635
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 293 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 336
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P+ I AL I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 337 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 396
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 397 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 422
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 423 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 466
Query: 399 IVD 401
+V+
Sbjct: 467 VVE 469
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
++ G H V+VT+ G S ++G G+LG G N +P + L + + ACG
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 355
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F ++ G + G +G LGHG + + P+ R L G
Sbjct: 356 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 401
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
+ +ACG HT V S G ++T+G G +G LGH ++K ++PR VD + V V
Sbjct: 402 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 461
Query: 290 ISAGSV-------NSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCM 336
+V +SS G+L+ W G+L + N + + P + L N C
Sbjct: 462 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF-CQ 520
Query: 337 DSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGY 393
+ V +S + G YG+LG K+ P +V+ L V +ACG
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGA 577
Query: 394 GHSLVIVDRTNV 405
H V+ RT V
Sbjct: 578 YHVAVLTSRTEV 589
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++G+LGHG+K + PT V+
Sbjct: 452 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 511
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G S TV +T G+ G +GQLG+ G N +E + V
Sbjct: 512 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVE 571
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ ACGA L+S + G G+LGHG ++ N+ P
Sbjct: 572 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 612
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ +L + + +ACGTN T AV ++ W G
Sbjct: 613 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 643
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 174/407 (42%), Gaps = 48/407 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L + R C H + G WG GQLG GD P ++
Sbjct: 30 IEPKLIESLYSFN-RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVM 88
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS------IRNEIEPSPVRC 158
+ + + H+ + EDG +G NK G+LG GS P V
Sbjct: 89 TSIK--NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L++E V +CG+ T L+ + A GL G+LGHG N+ T
Sbjct: 147 LLNEKVIKVSCGSFHTACLTDLNKA--YTWGLGMQGRLGHGDTNDVYT------------ 192
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ I +LAG ++ + CG +HT + + G VY G G +G+LG ++D ++P+ +
Sbjct: 193 --PKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQG 250
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP----------LMD 327
N + +S G +S+ G++Y WG+ G + P+P L
Sbjct: 251 SLTNKSIKE---VSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNS 307
Query: 328 LSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ N+ C G+ H V ++ +WG + LG+G K + P IL+ ++
Sbjct: 308 IIAVNISC---GHSHTVVISNIGDVYAWGVTR--NLGHGVIDSKPND-PTLHPILQNKNI 361
Query: 387 ISVACGYGHSLVIVDRTNVGERLDQ--LDVYDGKASSQDNEEIDRNS 431
+ V+CG H++ + D + ++++ Y+ K +S N + D NS
Sbjct: 362 VQVSCGKTHTIALSDIELLIDKVNSSLTSNYNEKKNSNLNYKGDENS 408
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 30/336 (8%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG +E GQLG + P ++ L + +IK+ G H+ V+T G + +G+ G
Sbjct: 13 WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
QLG G +++ + P V + V +C + + +E + G + G+LG G+
Sbjct: 73 QLGLGDLKDIVIPR-VMTSIKNVINVSCSDRHSAAI--LEDGRLYTWGCNKSGKLGIGSL 129
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N + P+ + L E ++KV+CG+ HT + YTWG G GR
Sbjct: 130 NVNLNNNIIC--------TPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGR 181
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KN 314
LGH + D + P+ ++ +V I G +++ G++Y +GKL
Sbjct: 182 LGHGDTNDVYTPKLIESLAGLSV----KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFG 237
Query: 315 NGDDWMYPKPLM-DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSS 372
+ +D PK L L+ +++ + G H + +WG Q G LG+ G +
Sbjct: 238 SKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--QGGRLGHIYNGPEPD 295
Query: 373 AM-PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
+ PK V+ L + ++++CG+ H++VI +N+G+
Sbjct: 296 ILSPKLVEKLNSIIAVNISCGHSHTVVI---SNIGD 328
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 105 bits (262), Expect = 5e-20, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 41/269 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTE 127
H +A+ +GR Y+WG + G+LGHG+ + + P I+ + +++ G H+ +T
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
+G +G +G+LG G + P+ V+ ++ V + +CG+ FTV +S + ++ +
Sbjct: 540 EGLLYTWGDGDYGRLGHGDNHSRSIPTLVKD-ITGVGSVSCGSSFTVVISQ-DATTVWSF 597
Query: 188 GLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G G+LGHG T Y RP+ I+ L G I KV C + ++A+ S
Sbjct: 598 GAGDNGKLGHGDTSRVY---------------RPKVISNLQGLLIRKVCCASQSSLALTS 642
Query: 247 KGYVYTWGFG---GYGRLGHREQKDE--WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
G V+ WG G GYG Q D VP+R+D FQ ++ I+ G +
Sbjct: 643 IGQVFVWGSGPCLGYG------QADATFLVPKRLDEFQDLQIID----IAVGDNHCLALT 692
Query: 302 GGGQLYMWGK-------LKNNGDDWMYPK 323
+Y WG L NN + P+
Sbjct: 693 CDNDVYSWGNNASGQCGLGNNNSPVLLPR 721
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 43/341 (12%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVA 72
E G +L CG + +G+ GN RLRP+ V + + H +A
Sbjct: 3453 EHDGTVLACGEGSYGRLGQ------GNSDDLPRLRPITALQGFVVTELATSTGLEGHSLA 3506
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ G ++WG + G+LGHG+ ++ RP + L + G H+ +VT DG
Sbjct: 3507 LTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLF 3566
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQ 191
FG + G+LG G+ N+ P+ V L V ACGA+ TV +++ + S+ G +
Sbjct: 3567 TFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTT-DRESVWTFGEGE 3625
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YGQLG G A+ P+ + A + I K+ CG T+A+ +G VY
Sbjct: 3626 YGQLGLGRTT--------------AKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671
Query: 252 TWGFGG-YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ G G Q ++ P++V + I+AG ++ G ++ WG
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFI----EDIAAGYEHALALTKEGDVWSWG 3727
Query: 311 KLKNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMH 342
N+ D + P + L G +R + +G+ H
Sbjct: 3728 ---NDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNH 3765
Score = 96.7 bits (239), Expect = 3e-17, Method: Composition-based stats.
Identities = 101/387 (26%), Positives = 156/387 (40%), Gaps = 100/387 (25%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWG GQL ++ +PT+ S SK K+ G + T V+ DG LA G +
Sbjct: 3410 YTWGGGRHGQLAESGRLVL-QPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSY 3466
Query: 140 GQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G+LG G+ + P+ L V+E+ AT+ G + L+ E + + G YG+L
Sbjct: 3467 GRLGQGNSDDLPRLRPITALQGFVVTEL-ATSTGLEGHS-LALTETGEVFSWGDGDYGKL 3524
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT--VAVDSKGY---- 249
GHG E Q RPR I AL GE ++ VACG H+ V VD K +
Sbjct: 3525 GHGNS--------------ERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGA 3570
Query: 250 -----------------------------------------------VYTWGFGGYGRLG 262
V+T+G G YG+LG
Sbjct: 3571 SDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLG 3630
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG------ 316
+ P+ VD F + N+ I G+ + G++Y G + NG
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNI----KKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDT 3686
Query: 317 --DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
D+ YP+ +M LS + + +G H + + SWG+ G+LG G
Sbjct: 3687 QHADY-YPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLG------QT 3739
Query: 374 MPKK----VDILEGMHVISVACGYGHS 396
+P++ + L+G + ++ G+ HS
Sbjct: 3740 LPQREPCLISSLQGKGIRQISAGHNHS 3766
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L P+ G +R +A G H A+ EG YTWG + G+LGHGD R PT+V +++
Sbjct: 516 LGPMQGKVVRQIAVGYR--HSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDIT- 572
Query: 110 YKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATA 167
+ G S TVV+++D ++ +FG +G+LG G P + L +
Sbjct: 573 -GVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVC 631
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
C + ++ L+S+ + +G P G Y D++ + P+ +
Sbjct: 632 CASQSSLALTSIGQVFVWGSG-PCLG---------YGQADATFLV-------PKRLDEFQ 674
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPP 286
I+ +A G NH +A+ VY+WG G+ G +PR+V F N+V+
Sbjct: 675 DLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFD-NHVIYQ 733
Query: 287 EAVISAGSV 295
+V ++ S+
Sbjct: 734 ISVGTSHSI 742
Score = 82.8 bits (203), Expect = 4e-13, Method: Composition-based stats.
Identities = 85/342 (24%), Positives = 139/342 (40%), Gaps = 72/342 (21%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
E Y WG N QLG +SE K I + + +E GN
Sbjct: 404 ESHVYVWGSNSSYQLG------------ISEPEKMLIPHL----TPSFANSEQGN----- 442
Query: 136 WNKHGQLGSGSIRNEIEPSPVR----CLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G+LG G N+ P +R C + + ++ T+ ++S I + G
Sbjct: 443 ---YGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIAS--DGRIYSWGDGD 497
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYV 250
YG+LGHG + Q P+ I + G+ + ++A G H+ A+ S+G +
Sbjct: 498 YGKLGHGN--------------HVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLL 543
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEA--VISAGSVNSSCTAGGGQLY 307
YTWG G YGRLGH + +P V D+ +V + V+ + + + G G
Sbjct: 544 YTWGDGDYGRLGHGDNHSRSIPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDN- 602
Query: 308 MWGKLKNNGDDWMY-PKPLMDLSGWNLR---CMDSGNM------HHFVGADSSCISWGHA 357
GKL + +Y PK + +L G +R C ++ FV C+ +G A
Sbjct: 603 --GKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQA 660
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
L +PK++D + + +I +A G H L +
Sbjct: 661 DATFL-----------VPKRLDEFQDLQIIDIAVGDNHCLAL 691
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ CG N T ++ G V G G YGRLG D +PR + + E S
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDD--LPRLRPITALQGFVVTELATST 3498
Query: 293 G-SVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-F 344
G +S G+++ W GKL + N + P+ + L G ++ + G+ H
Sbjct: 3499 GLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAI 3558
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VDRT 403
V D ++G + G LG G K +P +V L+ + V +ACG H++V+ DR
Sbjct: 3559 VTVDGKLFTFGASDLGRLGLGNTSNKK--LPAQVTALQPIMVELIACGANHTVVVTTDRE 3616
Query: 404 NV 405
+V
Sbjct: 3617 SV 3618
Score = 48.5 bits (114), Expect = 0.009, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL----PPEAVISAGSVNSSC 299
+ +K YTWG G +G+L + P F + + VI +C
Sbjct: 3403 MSAKCEAYTWGGGRHGQLA-ESGRLVLQPTLTSSFSKAKQIHCGHNSTFVIEHDGTVLAC 3461
Query: 300 TAGGGQLYMWGKL-KNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHFVGADSS--CISW 354
G +G+L + N DD +P+ L G+ + +G H + + SW
Sbjct: 3462 GEGS-----YGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSW 3516
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG+G + P++++ L G V+ VACG+ HS ++
Sbjct: 3517 GDGDYGKLGHG--NSERQRRPRQIEALRGEDVLHVACGHKHSAIV 3559
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L I +AAG H +A+ EG ++WG + GQLG G + + P ++S
Sbjct: 3693 PQQVMALSEQFIEDIAAGYE--HALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISS 3750
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AG +H+ T
Sbjct: 3751 LQGKGIRQISAGHNHSAAWT 3770
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 155/384 (40%), Gaps = 46/384 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +VA G H V + +TWG G+LGHG +P
Sbjct: 273 DILVPKPLESNVMLDVSYVACGVK--HAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPR 330
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V LS ++ G HT +T G+ +G H G LG GS + P P+
Sbjct: 331 LVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 390
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V+A +CG T ++S + G +G LGHG E
Sbjct: 391 EGL--QVSAVSCGTWHTALITS--SGKLYTFGDGTFGVLGHGNR--------------ET 432
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ- 266
P+ + +L G + V+CG HT AV S G ++TWG G RLGH ++
Sbjct: 433 ISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRS 492
Query: 267 ---KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
K VP +D V I + TAG ++G+L N +D YP+
Sbjct: 493 SKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSS---VYGQLGNPNNDGRYPR 549
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ + G +H S +WG G LG+G + + P V+ L
Sbjct: 550 LVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEAL 607
Query: 382 EGMHVISVACGYGHSLVIVDRTNV 405
V +ACG G + I +V
Sbjct: 608 RDRSVKRIACGSGFTAAICQHKSV 631
>gi|297828852|ref|XP_002882308.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328148|gb|EFH58567.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1081
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 151/377 (40%), Gaps = 71/377 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P R+ L G I+ V+A H VA+ G YTWG G+LGH G
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISSHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++S L ++K A + HTV+ TE G+ +G N+ GQLG S+ + P V L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ A + T +S E + G + GQLG+GT N +
Sbjct: 295 KAKIVAVSAANKHTAVVS--ECGEVFTWGCNREGQLGYGTSNSASNYS------------ 340
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ +A HT+ + + G VYTW GHR PRR+ +
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHRLV----TPRRIIISR 388
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
F R L A I+AG V+S A G L+ W
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGALFYWVS--------------- 432
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHA--QYGELGYGPYGQKSSAMPKKVDILEG 383
S N RC ++H V + S+ W A GE+ Y G+ MP + L
Sbjct: 433 --SDSNFRCQQLHSLHGKTVVSISAGKYWASAVTSTGEV-YMWDGKDGKDMPPSLSRLHN 489
Query: 384 M-HVISVACGYGHSLVI 399
+ +VA G H LV+
Sbjct: 490 LKRATTVAVGETHLLVV 506
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P + +L G I V+ H+VA+ S G VYTWGFG GRLGH E
Sbjct: 173 VQKVPGRVDSLHGCFIKLVSAAKFHSVAISSHGEVYTWGFGRGGRLGHPE---------F 223
Query: 276 DVFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGD 317
D+ + V+ P VIS A ++ GG +Y WG + + D
Sbjct: 224 DIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVD 283
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + L + + + N H V ++ +WG + G+LGYG S+ P+
Sbjct: 284 TQATPRKVTSLKA-KIVAVSAANKHTAVVSECGEVFTWGCNREGQLGYGTSNSASNYSPR 342
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD L+G ++A H+LV+
Sbjct: 343 LVDYLKGKVFTAIASSKYHTLVL 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 37/249 (14%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G++ + P V L IK A + H+V ++ G +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISSHGEVYTW 210
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVS-----EVTATACGADFTVWLSSVEGAS 183
G+ + G+LG I P R ++S V A A TV + EG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITP---RQVISGLGSRRVKAVAAAKHHTVI--ATEGGD 265
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G + GQLG Y + D+ Q PR + +L + IV V+ HT
Sbjct: 266 VYTWGSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAV 310
Query: 244 VDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
V G V+TWG G+LG+ + PR VD + + V I++ ++
Sbjct: 311 VSECGEVFTWGCNREGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLR 366
Query: 302 GGGQLYMWG 310
G++Y WG
Sbjct: 367 NDGEVYTWG 375
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G +LG Q + VP RVD + ++SA +S + G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISSHGEVYTW 210
Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
G + + P +SG R + + HH V A +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ G+LGY + A P+KV L+ +++V+ H+ V+
Sbjct: 271 SNREGQLGYT--SVDTQATPRKVTSLKA-KIVAVSAANKHTAVV 311
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A C H V V +G ++WG G+LGHG +P ++
Sbjct: 299 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 417 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHG-------DKKSVFI-------PREVD 460
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G GRLGH ++ + VP
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N+ D P +
Sbjct: 521 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 576
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 634
Query: 386 VISVACGYGHSLVI 399
V S+ACG + +
Sbjct: 635 VKSIACGTNFTAAV 648
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 306 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 349
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P+ I AL I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 350 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 409
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 410 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 435
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 436 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 479
Query: 399 IVD 401
+V+
Sbjct: 480 VVE 482
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
++ G H V+VT+ G S ++G G+LG G N +P + L + + ACG
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 368
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F ++ G + G +G LGHG + + P+ R L G
Sbjct: 369 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 414
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
+ +ACG HT V S G ++T+G G +G LGH ++K ++PR VD + V V
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 474
Query: 290 ISAGSV-------NSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCM 336
+V +SS G+L+ W G+L + N + + P + L N C
Sbjct: 475 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF-CQ 533
Query: 337 DSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGY 393
+ V +S + G YG+LG K+ P +V+ L V +ACG
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGA 590
Query: 394 GHSLVIVDRTNV 405
H V+ RT V
Sbjct: 591 YHVAVLTSRTEV 602
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++G+LGHG+K + PT V+
Sbjct: 465 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 524
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G S TV +T G+ G +GQLG+ G N +E + V
Sbjct: 525 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVE 584
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ ACGA L+S + G G+LGHG ++ N+ P
Sbjct: 585 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 625
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ +L + + +ACGTN T AV ++ W G
Sbjct: 626 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 656
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P +R L G+ I+ ++ C CHC+AV +E + +WGRN+ G+
Sbjct: 91 WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 148
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +IK AG H+V +TEDG+ +GW ++G LG G +
Sbjct: 149 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 208
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P V ++ +CG T+ +SS G + G +YGQLGHG
Sbjct: 209 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 256
Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
+E PR + AL+ + I +V
Sbjct: 257 ----FEDCLVPRKVQALSDKLISQV 277
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S I
Sbjct: 14 VLLISAG--ASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTC 71
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADF 172
G +TV ++ G + ++GW G+LG G + P P+R L + +++ C
Sbjct: 72 GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC-- 129
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L+ +L+ G Q G+LG GT TKDS V P+ I A G I
Sbjct: 130 ---LAVTMENKVLSWGRNQNGELGLGT-----TKDSHV---------PQKILAFEGIRIK 172
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
VA G H+VA+ G +Y WG+G YG LG + D +P +V++ V+ +S
Sbjct: 173 MVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-----VSC 227
Query: 293 GSVNSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLS 329
G ++ + G LY W K G +D + P+ + LS
Sbjct: 228 GWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALS 270
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT+L G DI V+ C + + VA G+ Y+WG + G+LGHGD P +
Sbjct: 55 PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 112
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L +IK+ G H + VT + L++G N++G+LG G+ ++ P + +
Sbjct: 113 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 172
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A GA+ +V ++ E + G +YG LG G N+ +L E
Sbjct: 173 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 215
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ G+ IV V+CG HT+++ S G +YT G+ YG+LGH + +D VPR+V
Sbjct: 216 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
I +E SP L+ + GA TV L + G + + G + GQLGHG ++
Sbjct: 3 IMSEKSASPPHVLL-----ISAGASHTVAL--LTGNVVCSWGRGEDGQLGHGDTDD---- 51
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY-VYTWGFGGYGRLGHRE 265
+ P ++A G+ IV V CG ++TVA G VY+WG+G +GRLGH +
Sbjct: 52 ----------RLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGD 101
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDW 319
D ++P + Q + IS G + ++ WG+ +N D
Sbjct: 102 PSDLFIPHPIRALQGLRI----KQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDS 157
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P+ ++ G ++ + +G H + D WG +YG LG G + +P+KV
Sbjct: 158 HVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR--LIPEKV 215
Query: 379 DILEGMHVISVACGYGHSLVI 399
+I +G ++ V+CG+ H++ I
Sbjct: 216 NI-DGDKIVMVSCGWRHTISI 235
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 30/273 (10%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVW 175
AG SHTV + ++G + GQLG G + + P+ + ++ + CGAD+TV
Sbjct: 19 AGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV- 77
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
S G + + G +G+LGHG ++ P I AL G I +++
Sbjct: 78 ARSKSGKDVYSWGWGDFGRLGHGDPSDLFI--------------PHPIRALQGLRIKQIS 123
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
CG H +AV + V +WG G LG KD VP+++ F+ + +++AG+
Sbjct: 124 CGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAE 179
Query: 296 NSSCTAGGGQLYMWG--KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
+S G LY WG + N G +D + P+ +++ G + + G H + +
Sbjct: 180 HSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEK-VNIDGDKIVMVSCGWRHTISISSS 238
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ G ++YG+LG+G + + +P+KV L
Sbjct: 239 GGLYTHGWSKYGQLGHGDF--EDCLVPRKVQAL 269
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
++ ++ G +HTVA+ + V +WG G G+LGH + D +P ++ F +++ +V
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVT 70
Query: 291 SAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
+ + G +Y WG +GD D P P+ L G ++ + G+ H
Sbjct: 71 CGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCL 130
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V ++ +SWG Q GELG G K S +P+K+ EG+ + VA G HS+ I +
Sbjct: 131 AVTMENKVLSWGRNQNGELGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 186
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 155/367 (42%), Gaps = 45/367 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++++A C H V V +G ++WG G+LGHG P ++
Sbjct: 298 PKALESTIVLDVQYIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 355
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
LS I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 356 LSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 415
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 416 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 459
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G RLGH +++ + VP
Sbjct: 460 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 519
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N D P +
Sbjct: 520 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEG 575
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 576 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 633
Query: 386 VISVACG 392
V S+ACG
Sbjct: 634 VKSIACG 640
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 305 IVLDVQYIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 348
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ I AL+ I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 349 HPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 408
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 409 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 434
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 435 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 478
Query: 399 IVD 401
+V+
Sbjct: 479 VVE 481
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++ +LGHGDK + PT V+
Sbjct: 464 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 523
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G S TV +T G+ G +GQLG+ G + +E + V
Sbjct: 524 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVE 583
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ ACGA L+S + G G+LGHG ++ N+ P
Sbjct: 584 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDADDRNS--------------PT 624
Query: 222 AIAALAGETIVKVACGTNHTVAV 244
+ +L + + +ACG+N T AV
Sbjct: 625 LVESLKDKQVKSIACGSNFTAAV 647
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
P +R LV + V C + H +A+ G Y+WG N GQLG D + P
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLR 191
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
++ L + G +H+ ++++ G +G N GQLG N P+ ++ L +
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG +F+V+L++ G AG YGQLGHG + + PR
Sbjct: 252 VRFAACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN--------------EMLPRM 295
Query: 223 IAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L G TI +VACG HT+A V S+G VY +G G G+LG R K +P+ V
Sbjct: 296 VMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 38/335 (11%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P + +++ G HT+ +T G A G N
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSN 67
Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+ QLG + R ++ P ++ +++ CG+ ++ LS + +L+ G GQL
Sbjct: 68 DYSQLGHDLPTKRPQLIPELQDYVIIQIS---CGSRHSLALS--DWGQVLSWGDNDCGQL 122
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH T+ E V+L P+ + L +T+V++ACG NH++A+ S G +Y+WG
Sbjct: 123 GHATEKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169
Query: 256 GGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
YG+LG D P R+ + P A I+ G +S + G ++ WG+
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYG 365
N+ + YP L L +R G+ F+ + + G YG+LG+G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L V
Sbjct: 286 --FSSNEMLPRMVMELMGSTITQVACGNRHTLAFV 318
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 32/325 (9%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC H + + G+ Y G N+ QLGH + RP ++ EL Y I + G H+
Sbjct: 45 VSCGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHS 102
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVE 180
+ +++ G L++G N GQLG + + ++ P VR LVS+ V ACG + ++ L+S
Sbjct: 103 LALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC- 161
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G YGQLG + N+ + P + L G + +ACG NH
Sbjct: 162 -GELYSWGSNIYGQLGVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNH 209
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ----RNNVLPPEAVISAGSVN 296
+ + G V+ WG G+LG ++ + P ++ + R E + +
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEG 269
Query: 297 SSCTAGGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCIS 353
T G G +G+L + + M P+ +M+L G + + GN H FV + +
Sbjct: 270 GVFTCGAGA---YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYA 326
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKV 378
+G G+L G KS +P+ V
Sbjct: 327 FGLGSSGQL--GTRSTKSLMLPQVV 349
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 163/360 (45%), Gaps = 42/360 (11%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L GV VA +AV +G + WG N GQLG G IQR PT VS
Sbjct: 191 SPAQVVGLTGV----VALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVS 246
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+L + AG H + + DG A+G N GQ+G G+ + PSPV+ + S A
Sbjct: 247 QLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD--RPSPVQ-VTSIARA 301
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A A L ++ + GL GQLG GT T DS + + R R + A
Sbjct: 302 KAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGT-----TADSPLPV------RVRGLGA 350
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ +A GT H V + + G ++TWG G G+LGH + P V + +NV
Sbjct: 351 -----VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVT--RLSNV-- 401
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSG 339
A +++GS +S G ++ WG+ N GD + P + LSG + SG
Sbjct: 402 --ASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSG-VVSVSASG 458
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ + +D + WG G++G G K A P +V+ L V ++A G H + +
Sbjct: 459 HHSFALRSDGTVWGWGRNAQGQMGDGT--TKDRASPARVEGLS--SVKALASGGSHMVAL 514
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 141/327 (43%), Gaps = 38/327 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA + H +A+ +G + WG N GQLG G +R P V L K + AG
Sbjct: 1156 MVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGS 1213
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H++ V EDG A+G+N GQLG G++ + P R L + G ++ +
Sbjct: 1214 YHSLAVREDGTVWAWGYNVFGQLGDGTM--DARAVPTRMLGLDGAVAVAGGEYHSLMLRF 1271
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+G ++ G +GQLG GT + + S ++ Q R V G
Sbjct: 1272 DG-TLWATGNNSHGQLGEGT---FTNRLSPFQVVELDQVR-------------TVRAGGY 1314
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H+VA+ G V+TWG G G+LG VP V A+ S G+ S
Sbjct: 1315 HSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGL--------TAIASVGAGTSHT 1366
Query: 300 TAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
A G + + WG+ + GD D + P + L G + G+ GAD S +S
Sbjct: 1367 FAVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMS 1425
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDI 380
WG +G LG G GQ++ +P V +
Sbjct: 1426 WGTNVHGTLGIGLPGQRT--VPGAVTL 1450
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 160/362 (44%), Gaps = 44/362 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++PT++ L GV V AG H +A+ +G + WG N GQ+G D DRP+ V
Sbjct: 240 LAPTQVSQLQGVSA--VTAGL--YHALALRSDGTVWAWGSNSSGQMG--DGTWTDRPSPV 293
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
S + K A + ++V+ +DG A+G N GQLG G+ + P VR L VT
Sbjct: 294 QVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGL-GAVT 352
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ A G V L + ++ G GQLGHG+ + + +L+
Sbjct: 353 SLAAGTQHAVVLRA--DGTLWTWGHGATGQLGHGSSERMLSPEVVTRLS----------- 399
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+ VA G+ H+VA S G V+TWG G+LG + +P RV L
Sbjct: 400 -----NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVP------GL 448
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDS 338
+SA +S G ++ WG+ GD D P + LS +++ + S
Sbjct: 449 SGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEGLS--SVKALAS 506
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D + +WG+ G+LG G + + P +V L G V SVA G SL
Sbjct: 507 GGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRA--PVQVTGLSG--VTSVAAGAYFSL 562
Query: 398 VI 399
+
Sbjct: 563 AL 564
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 44/360 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ L GV V+ H A+ +G + WGRN +GQ+G G R P V
Sbjct: 442 PVRVPGLSGV----VSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG 497
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS +K +G SH V + DG +G+N GQLG G+ + P V L S VT+
Sbjct: 498 LSS--VKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGL-SGVTSV 554
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A GA F++ L + ++ G GQLG G + + P + L
Sbjct: 555 AAGAYFSLALRT--DGTVWAWGDGFEGQLGDGAGVQ--------------RASPVQVTGL 598
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+VK+A G H +AV G V+ WG G++G D + R V V+ V
Sbjct: 599 --TRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRF--RAVQVYGLTGV--- 651
Query: 287 EAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPLM----DLSGWNLRCMDSGN 340
+ + G +S A G L WG GD + P+ + LSG ++ + +
Sbjct: 652 -SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSG--IKLLGASY 708
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+H V D ++WG+ ++G+LG G G S++P +V L +S G HSL++
Sbjct: 709 LHVLAVREDGMLLTWGYNRFGQLGLGAAGW--SSLPVQVRGLGQGRRLS--AGRAHSLLV 764
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 151/388 (38%), Gaps = 78/388 (20%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
G H +AV +G TWG N GQLG G P V L + + + AGR+H++
Sbjct: 705 GASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSL 762
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-------CGADFTVWL 176
+V DG LA+G N GQLG GS + P R L A+A D TVW
Sbjct: 763 LVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCARAASAGRQHSLVLACDGTVW- 821
Query: 177 SSVEGASILNAGLPQYGQLGHG--TDNEYNTK--------------DSSVKLAYEA---- 216
+ G GQLG G T Y K DSS+ L +
Sbjct: 822 ---------SWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWT 872
Query: 217 ----------------QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ P + LAG I G H + V G V+ WG G G+
Sbjct: 873 WGANGSGQLGDGTLGDRASPLEVKGLAG--IATGVMGEAHALVVSQDGTVWAWGANGRGQ 930
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDD 318
LG P RV L +S G S G ++ WG + GD
Sbjct: 931 LGDGTTTSSASPVRV------AGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDG 984
Query: 319 W----MYPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSS 372
PKP+ DL+ +++ + +G HH V D + WG +G++G G + +
Sbjct: 985 TNVARTTPKPVQDLA--DVKAVTAG-AHHVVAVRHDGTVWGWGANAFGQVGDGTHFWRFR 1041
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P +V+ L ++ + + G HSL ++
Sbjct: 1042 --PVRVEGL--LNAVETSAGEQHSLALL 1065
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 22 LLFCGSTCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+L C T W G +G L DG + S P ++ L GV + +A G S + + +G
Sbjct: 813 VLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV-VAVLAGGDSS---MVLRADG 868
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+TWG N GQLG G R P V L+ I G +H +VV++DG A+G N
Sbjct: 869 TVWTWGANGSGQLGDGTLGDRASPLEVKGLAG--IATGVMGEAHALVVSQDGTVWAWGAN 926
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ + P V L S + G ++ L+ + ++ + G GQLG
Sbjct: 927 GRGQLGDGTTTSSASPVRVAGL-SAAMNVSVGQAYS--LAVLPDGTVWSWGANDSGQLGD 983
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT+ A+ P+ + LA + V G +H VAV G V+ WG
Sbjct: 984 GTN--------------VARTTPKPVQDLA--DVKAVTAGAHHVVAVRHDGTVWGWGANA 1027
Query: 258 YGRLGHREQKDEWVPRRVD 276
+G++G + P RV+
Sbjct: 1028 FGQVGDGTHFWRFRPVRVE 1046
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 148/337 (43%), Gaps = 31/337 (9%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
+ +AV +G ++WG N+ GQLG G + R P V +L+ K AGA H V V
Sbjct: 959 AYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKAVTAGA--HHVVAVRH 1016
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G N GQ+G G+ P V L++ V T+ G ++ L E A L+
Sbjct: 1017 DGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAVE-TSAGEQHSLALLGDERA--LSW 1073
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +YGQLG ++ + + VKL P + + V V+ H A+ +
Sbjct: 1074 GSHEYGQLGD-AESGPSLEPVGVKL-----PSSKVLVP-----AVSVSAWHQHAAALLAD 1122
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V TWG G+LG + P V + P A ++ G ++
Sbjct: 1123 GTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAA------RHTLALRSDGTVW 1176
Query: 308 MWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
WG +G + P+ + + + +G+ H V D + +WG+ +G+L
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQL 1236
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G + A+P ++ L+G ++VA G HSL++
Sbjct: 1237 GDGT--MDARAVPTRMLGLDG--AVAVAGGEYHSLML 1269
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 146/355 (41%), Gaps = 59/355 (16%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGR 119
VAAG H + V G + WG N GQLG G QR V L+ + AG
Sbjct: 53 VAAGA--QHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTD--VTSIAAGD 108
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------AD 171
+H++ + D +G N GQ+G G+ + P V L S+V A A G AD
Sbjct: 109 AHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGL-SDVVAVAAGEFHSLALRAD 167
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
TVW G YGQLG G + P P + L G +
Sbjct: 168 GTVW----------AWGSNFYGQLGRGHS--------------QPGPSPAQVVGLTG--V 201
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V +A G + ++AV S G V+ WG G G+LG P +V Q + ++
Sbjct: 202 VALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQG------VSAVT 255
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GD-DWM-YPKPLMDLSGWNLRCM---DSGNMHHF 344
AG ++ G ++ WG + GD W P P+ S + + D+G++
Sbjct: 256 AGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSL--V 313
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ D +WG G+LG G S +P +V L V S+A G H++V+
Sbjct: 314 LLDDGGVFAWGLNSQGQLGIGT--TADSPLPVRVRGLGA--VTSLAAGTQHAVVL 364
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 98/225 (43%), Gaps = 28/225 (12%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G +D V PTR+ +G+D AG H + + +G + G N GQLG G
Sbjct: 1239 GTMDARAV-PTRM---LGLDGAVAVAGG-EYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V EL + + +AG H+V + EDG +G N GQLG G++ P+PV
Sbjct: 1294 RLSPFQVVELDQVRTVRAGG--YHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVP 1351
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + G T G+ G +GQLG T DSS +L
Sbjct: 1352 GL-TAIASVGAGTSHTF----AVGSETWAWGRNSHGQLG--------TGDSSDRL----- 1393
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P + L G + V G + +VA + G +WG +G LG
Sbjct: 1394 -EPTLVKGLHG--VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLG 1435
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 125/308 (40%), Gaps = 48/308 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G ++WG N +GQLG G R P V L + + AG ++V+ D
Sbjct: 810 HSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL--WGVVAVLAGGDSSMVLRAD 867
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-------VSEVTATACGADFTVWLSSVEG 181
G +G N GQLG G++ + P V+ L + E A D TVW G
Sbjct: 868 GTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
GQLG GT T +S P +A L+ + V+ G ++
Sbjct: 928 ----------RGQLGDGT----TTSSAS----------PVRVAGLSAA--MNVSVGQAYS 961
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+AV G V++WG G+LG P+ V L ++AG+ +
Sbjct: 962 LAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPV------QDLADVKAVTAGAHHVVAVR 1015
Query: 302 GGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
G ++ W G++ + W + +P+ N +G H + D +SWG
Sbjct: 1016 HDGTVWGWGANAFGQVGDGTHFWRF-RPVRVEGLLNAVETSAGEQHSLALLGDERALSWG 1074
Query: 356 HAQYGELG 363
+YG+LG
Sbjct: 1075 SHEYGQLG 1082
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 59/319 (18%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P S+ K AG H++ VT+ G A+G N GQLG+GS+ + + +
Sbjct: 39 PAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGL 98
Query: 161 SEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
++VT+ A G AD TVW G GQ+G GT+ +
Sbjct: 99 TDVTSIAAGDAHSLALRADRTVW----------TWGGNNAGQVGDGTNVD---------- 138
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+P P+ + L+ +V VA G H++A+ + G V+ WG YG+LG + P
Sbjct: 139 ----RPTPQKVPGLS--DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPG--P 190
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----DWMY-----PK 323
V V+ ++AG S G ++ WG NG D Y P
Sbjct: 191 SPAQVVGLTGVV----ALAAGFDFSLAVRSDGTVWAWGA---NGSGQLGDGTYIQRLAPT 243
Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ L G + + +G H + +D + +WG G++G G + + P V +
Sbjct: 244 QVSQLQG--VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDR----PSPVQVTS 297
Query: 383 GMHVISVACGYGHSLVIVD 401
+VA SLV++D
Sbjct: 298 IARAKAVAAQDAGSLVLLD 316
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G+ +TWG + G+LGHGD + P ++ L+ I A G H+ V +
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +G +G+LG G P V + E + CG + TV LS+ +G ++ + G
Sbjct: 285 GHLYMWGEGDYGRLGLGDALQRSVPVQVPD-IREASQVVCGFNHTVVLST-DGRTVWSFG 342
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG N Q RP+ I AL G TI ++A GT + AV +G
Sbjct: 343 AAENGKLGHGDTNR--------------QFRPKIIDALQGLTITQIAAGTQISAAVTREG 388
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+Y WGFG LG+ + + +P+ V V+ I+ G + G ++
Sbjct: 389 ALYVWGFGPC--LGNGSSDETFMLPKVVRGLSGRVVID----IAIGENHVVALTKDGLVF 442
Query: 308 MWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
WG +N + P+ + L G ++ + +G H FV + + C
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWSAAPC 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 153/383 (39%), Gaps = 91/383 (23%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N QL D D+ LS Y K+ AG+ T V +G +A G
Sbjct: 132 FCWGSNSSQQLT--DATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVLSNGTVMANGKGS 189
Query: 139 HGQLGSGSIRNE-----IE-PSPVRCLV----SEVTATACGADFTVWLSSVEGASILNAG 188
+G+LG+G+ + IE P+PVR ++ S+ + A G + +W G
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIW----------TWG 239
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YG+LGHG DS+ Q P+ I ALA IV CG H+ AV G
Sbjct: 240 DGDYGKLGHG--------DSTT------QKSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRV-DV---------FQRNNVLP------------- 285
++Y WG G YGRLG + VP +V D+ F VL
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAE 345
Query: 286 --------------PEAV----------ISAGSVNSSCTAGGGQLYMWGK---LKNNGDD 318
P+ + I+AG+ S+ G LY+WG L N D
Sbjct: 346 NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSD 405
Query: 319 --WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+M PK + LSG + + G H + D +WG+ Q G+ G G G + P
Sbjct: 406 ETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-GMATYTSP 464
Query: 376 KKVDILEGMHVISVACGYGHSLV 398
+ V L G + V G H+ V
Sbjct: 465 QMVQGLHGAGIQQVTAGTTHTFV 487
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V A C H AV G Y WG + G+LG GD +QR P V ++ + + G
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGF 325
Query: 120 SHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
+HTVV++ DG ++ +FG ++G+LG G + P + L +T A G + ++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVT 385
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
EGA + P LG+G+ +E P+ + L+G ++ +A G
Sbjct: 386 R-EGALYVWGFGP---CLGNGSSDETFM-------------LPKVVRGLSGRVVIDIAIG 428
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG 262
NH VA+ G V+TWG G+ G
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCG 453
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 115/267 (43%), Gaps = 37/267 (13%)
Query: 151 IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL---PQYGQ--LGHGTDNEYNT 205
IE + + ++ TA + T+ LSS+ AS + G P + G+++
Sbjct: 84 IEAQILNMVATKPKVTADQSALTI-LSSIAAASCNDGGTNGGPSFADEVFCWGSNSSQQL 142
Query: 206 KDSSV--KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
D++ KL Y PR ++ ++ + G T AV S G V G G YGRLG+
Sbjct: 143 TDATPEDKLLY-----PRNLSVYG--KVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGN 195
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVI-SAGSVNSSCTAG-GGQLYMW-----GKLKNNG 316
P ++ P ++ S GS S G GQ++ W GKL +G
Sbjct: 196 GASASSSSPILIEF-----PAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGKL-GHG 249
Query: 317 DDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSA 373
D PK + L+ + D G+ H D+ + WG YG LG G Q+S
Sbjct: 250 DSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRS-- 307
Query: 374 MPKKV-DILEGMHVISVACGYGHSLVI 399
+P +V DI E V+ CG+ H++V+
Sbjct: 308 VPVQVPDIREASQVV---CGFNHTVVL 331
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 52/367 (14%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G D+R +A C + H A + G YTWG + G+LGH + R P VS
Sbjct: 169 PRVVEALLGKDVRGIA--CGAAHTAAWNGAGVLYTWGAGQ-GRLGHDHERDRFIPLEVSA 225
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L K+ +A G +HT +T+ G +G K G LG G P V L +V
Sbjct: 226 LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVV 285
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+ + ++ G + GQLG G D + +++ P +A L
Sbjct: 286 VIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFG--------DRTPRMS------PALLADL 331
Query: 227 AGETIVKVACG---TNHTV-----AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +I ++AC +N V A ++TWG G G+LGH +++E VPR+V
Sbjct: 332 S--SISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVMAL 389
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNL 333
++ N++ ++AG +++ G+++ WG +L + Y KPL+ S
Sbjct: 390 EQVNII----AVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLLIES---- 441
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
DSG+++ +WG+++ G LG G ++ ++P+ V+ +EG V +VACG
Sbjct: 442 -LKDSGHLY----------AWGNSRRGALG-GGLAEEVVSVPRAVEAMEGKKVKAVACGK 489
Query: 394 GHSLVIV 400
H +V
Sbjct: 490 RHCAALV 496
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N +G++G G + P V L+ +V ACGA T ++ GA +L G+L
Sbjct: 153 NDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHT---AAWNGAGVLYTWGAGQGRL 209
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH D+E +D + P ++AL G+ +V+ ACG HT A+ G VYTWG
Sbjct: 210 GH--DHE---RDRFI---------PLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQ 255
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
G G LGH ++ PR V + VI V + G G +Y WG +
Sbjct: 256 GKGGVLGHGDESACSTPREVASLALQVI---VVVIVVVVVAAVVAGGSGTVYAWGGNEKG 312
Query: 316 ----GDDW--MYPKPLMDLSGWN-LRC------MDSGNMHHFVGADSSCISWGHAQYGEL 362
GD M P L DLS + + C + H +WG G+L
Sbjct: 313 QLGFGDRTPRMSPALLADLSSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQL 372
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G ++ +P++V LE +++I+VA G H+ + + V
Sbjct: 373 GHGT--EEEELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEV 413
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 41/356 (11%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI--QRDRPTIVSELSKYKI 112
+ I++V+ C H + Y+ G N GQLG GD ++ P +V L K
Sbjct: 115 NIGIKYVS--CGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKP 172
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTAT 166
G +HT+V TE G+ ++G G LG+G++ ++ P + S++
Sbjct: 173 ISIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQV 232
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+ G F+ L + + G GQLG G ++ N P +I
Sbjct: 233 SAGMRFSAILD--QSGRVYTCGQNDAGQLGIGGRDQENI--------------PISIKKF 276
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E + +ACG H + + +G VY+ G +G+LG +++ P + P
Sbjct: 277 P-ERVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISH----IP 331
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-- 344
++AGS ++S + G LY+WG +++ P + + G + + GN HF
Sbjct: 332 MRYVAAGSFSASISYDSGDLYLWG--SGVFGEFLTPHRVKTIKGMTV-SVSIGN--HFGI 386
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V D SWGH GELG G + ++ + P+ ++ L V V+CG S+ +
Sbjct: 387 AVNQDGIVYSWGHNNSGELGQGDFDERPT--PQIINQLNDKIVTLVSCGRNFSIAL 440
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 134 FGW--NKHGQLGSGSIRNEI---EPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
F W ++ GQLG G +++I P P C + + +CG + ++++ G + +
Sbjct: 85 FSWGSDQAGQLGLG--QSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITT--GNMVYSM 140
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG G D S+K+ + P + AL + + +ACG NHT+ +
Sbjct: 141 GSNTNGQLGVG--------DMSLKM----KNSPMLVEALMDQKPISIACGANHTLVCTER 188
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQL 306
G VY+WG G +G LG D+++P+ + + + + +SAG S+ G++
Sbjct: 189 GDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRV 248
Query: 307 YMWGK 311
Y G+
Sbjct: 249 YTCGQ 253
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G ++P R++ + G+ V+ + +AV+ +G Y+WG N G+LG GD +R P
Sbjct: 360 GEFLTPHRVKTIKGMT---VSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTP 416
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
I+++L+ + GR+ ++ + + A N+H QL S
Sbjct: 417 QIINQLNDKIVTLVSCGRNFSIALGQTLKQEAALCNQHEQLQS 459
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 321 YPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
YP P ++ + G+ H F+ + S G G+LG G K P V+
Sbjct: 106 YPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVE 165
Query: 380 ILEGMHVISVACGYGHSLVIVDRTNV 405
L IS+ACG H+LV +R +V
Sbjct: 166 ALMDQKPISIACGANHTLVCTERGDV 191
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 32/332 (9%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + + + G HT+ +T G A G N
Sbjct: 4 YCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSN 63
Query: 138 KHGQLGS--GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+ QLG S R P V C+++++ ACG+ ++ L+ E +L+ G + GQL
Sbjct: 64 DYAQLGHELSSKRPLQIPELVDCVITQI---ACGSRHSMALT--EWGQVLSWGDNECGQL 118
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GH +D + V+L P+ + AL +T+V++ACG NH++A+ G +Y WG
Sbjct: 119 GHASDQD------VVQL-------PKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGS 165
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
YG+LG + E + + P I+ G +S + ++ WG+
Sbjct: 166 NIYGQLGVKT-PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224
Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
N+ + YP L L +R + G+ F+ + + G YG+LG+G G
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 285 NE--MLPRMVMELMGSTISQVACGNRHTLAMV 314
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 30/251 (11%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D ++V P +R LV + V C + H +A+ G Y WG N GQLG
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTV--VQIACGNNHSLALTCCGELYAWGSNIYGQLGV 173
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
+ Q + P +++ L ++ G +H+ ++++ +S FGW N GQLG
Sbjct: 174 KTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISK--SSAVFGWGRNNCGQLGLNDE 231
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNT 205
N P+ ++ L + V ACG +F+V+L++ G AG YGQLGHG NE
Sbjct: 232 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFCGNEM-- 287
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHR 264
PR + L G TI +VACG HT+A V ++G +Y +G G G+LG R
Sbjct: 288 -------------LPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTR 334
Query: 265 EQKDEWVPRRV 275
K +P+ V
Sbjct: 335 NTKSLNLPQMV 345
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 38 GALDGNLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
G D +++P+++ +P V+ C H + + G+ Y G N+ QLGH +
Sbjct: 18 GIEDEQILTPSKMPWQPDSAVN----QIACGHRHTLFLTASGKVYACGSNDYAQLGH--E 71
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PS 154
+ RP + EL I + G H++ +TE G L++G N+ GQLG S ++ ++ P
Sbjct: 72 LSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPK 131
Query: 155 PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
VR LVS+ V ACG + ++ L+ + G YGQLG T +E ++
Sbjct: 132 TVRALVSKTVVQIACGNNHSLALTCC--GELYAWGSNIYGQLGVKTPSELGQCNA----- 184
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P + L G + +ACG NH+ + V+ WG G+LG ++ + P
Sbjct: 185 ------PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPT 238
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNN--GDDWMYPKPLM 326
++ + V ++ G S G ++ +G+L + G++ M P+ +M
Sbjct: 239 QLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNE-MLPRMVM 293
Query: 327 DLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+L G + + GN H V A +G G+L G KS +P+ V
Sbjct: 294 ELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQL--GTRNTKSLNLPQMV 345
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G + + G +P L L+G+ +R +A G H +
Sbjct: 158 GELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACG--GNHSFLISKSSAV 215
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WGRN GQLG D+ R PT + L ++ G +V +T +G G +
Sbjct: 216 FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 275
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G NE+ P V L+ S ++ ACG T+ + G I GL GQLG
Sbjct: 276 GQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARG-RIYGFGLGSSGQLG 332
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 95 LVPKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 153
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 154 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 213
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 214 RVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 257
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 258 RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 311
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 312 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 346
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 76 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNG 135
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 136 YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA--DGELFAWGYNNCGQVG 193
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 194 SGSTAN--------------QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 239
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALHGMCV----NQIVCGYAHTLALTDEGLLYAWG 290
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 38/300 (12%)
Query: 112 IKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
I+KA G + + VT++ FG N LG+G ++ + P + L ++ + +
Sbjct: 53 IRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLS 112
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G+ V L++ +G + G Y QLG+GT N + + L
Sbjct: 113 YGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGIAPVQVCTNLL 158
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V N L +
Sbjct: 159 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-----TNCLHTK 213
Query: 288 AV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
V I+ G +S G++Y WG L NNG+ + P + L G + +
Sbjct: 214 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHGMCVNQIVC 272
Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
G H D + +WG YG+LG G K++ + ++E VI + AC H+
Sbjct: 273 GYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHT 329
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 250 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 308 PTQIMVEKERVIEIAACHSTHT 329
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 150/349 (42%), Gaps = 50/349 (14%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL- 107
+ P + D +V S H +AV +G Y WGRN+ G+LG G + P V +
Sbjct: 726 KTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPA 785
Query: 108 ---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
+ + + AG H++ + DGN+ A+G+N GQLG G+ + + VR T
Sbjct: 786 GTSTDFTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRA--TSVRVKKPAGT 843
Query: 165 ATACGADFTVW------LSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+T DFT S+ S NA GL +GQLG GT + + + VK+
Sbjct: 844 ST----DFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTD---RATPVKVGTP 896
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
A T ++ G H++AV S GY Y WG+ G+LG+ + + P
Sbjct: 897 A-------GTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPN 949
Query: 276 DVFQRNNVLPPEA-------VISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYP 322
V RN P +A ++AG +S G Y W G+L NN D P
Sbjct: 950 PVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVP 1009
Query: 323 KPLMDLS-------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
+ D + G + +G H +G+D + +WG YG+LG
Sbjct: 1010 VLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQLG 1058
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 162/394 (41%), Gaps = 70/394 (17%)
Query: 58 IRFV---AAGCVSC----HCVAVDVEGRCYTWGRNERGQLGHGDKI-----------QRD 99
IRF A+ VS +AV +G Y WG N++G+LG G Q D
Sbjct: 665 IRFSQVSASSFVSVTDFGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPD 724
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
R T + + + AG H++ V DGN+ A+G N G+LG G+ ++ +PVR
Sbjct: 725 RKTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQH--TPVRVK 782
Query: 160 VSEVTATACGADFTV------WLSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSV 210
T+T DFT + S+ S NA G GQLG GT + + +SV
Sbjct: 783 KPAGTST----DFTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTD---RATSV 835
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
++ A T V+V+ G H++A+ S G Y WG +G+LG D
Sbjct: 836 RVKKPA-------GTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRA 888
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY---P 322
P +V A I AG ++S G Y W G+L NN + P
Sbjct: 889 TPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNP 948
Query: 323 KPLMDLS---------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
P+ + G + +G H +G+D + +WG G+LG K S
Sbjct: 949 NPVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNN--SSKDS 1006
Query: 373 AMPKKV-------DILEGMHVISVACGYGHSLVI 399
+P V D +G+ + V+ G HSL +
Sbjct: 1007 TVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLAL 1040
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP----TIVSELSKYK 111
D +V + H +A+ +G Y WG N GQLG G R P T + +
Sbjct: 845 TDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFT 904
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP----VRCLVSE----- 162
+ GAG H++ V DG + A+G+N GQLG+ S P+P VR S
Sbjct: 905 YAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADK 964
Query: 163 -VTATACGADFTVWLSSVEGA--SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A A F W S G+ + G GQLG+ + +KDS+V +
Sbjct: 965 GLKAVNVTAGF--WHSLALGSDGNAYAWGFNSNGQLGNNS-----SKDSTVPVLVSDSAS 1017
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P + G V V+ G H++A+ S G Y WG GYG+LG+
Sbjct: 1018 PTDTSK--GLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQLGN 1059
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-------YKIKKAGAGRSH 121
H +A+ +G Y WG N GQLG+ P +VS+ + K G+ H
Sbjct: 977 HSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYH 1036
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSI-----RNEI-EPSPVRCLVS 161
++ + DGN+ A+G N +GQLG+ SI NE P PV + +
Sbjct: 1037 SLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPVVFN 1082
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 162/379 (42%), Gaps = 53/379 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 296 PKALESAVVLDVQNIA--CGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIES 353
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
LS I+ G HT VT G+ +G +N +G LG G+ + P V +
Sbjct: 354 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKRVNGPLEGI 412
Query: 162 EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V++ +CG W ++V +S + G +G LGHG SV L
Sbjct: 413 HVSSISCGP----WHTAVVTSSGQLFTFGDGTFGVLGHG-------DRKSVSL------- 454
Query: 220 PRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQK 267
PR I +L G V+ ACG HT AV S G ++TWG G GRLGH +++
Sbjct: 455 PREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 514
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
+ VP RV N ++ G + + G +Y ++G L N D P
Sbjct: 515 SKLVPTRVVTLDEPNF----CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLP 570
Query: 323 KPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
P+ LS + + G H + + + +WG G LG+G +++ P V+
Sbjct: 571 TPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNT--PTLVEA 628
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ V S+ACG + I
Sbjct: 629 LKDKQVKSIACGTNFTAAI 647
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G V++WG GRLGH D P+ ++
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G+ W+ + L G
Sbjct: 356 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG 411
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V S ++G +G LG+G +KS ++P++++ L+G+ +
Sbjct: 412 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DRKSVSLPREIESLKGLRTVQA 469
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 470 ACGVWHTAAVVE 481
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L P +R L G+ I+ ++ C CHC+AV +E + +WGRN+ G+
Sbjct: 128 WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 185
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +IK AG H+V +TEDG+ +GW ++G LG G +
Sbjct: 186 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 245
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+ P V ++ +CG T+ +SS G + G +YGQLGHG
Sbjct: 246 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 293
Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
+E PR + AL+ + I +V
Sbjct: 294 ----FEDCLVPRKVQALSDKLISQV 314
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 65 CVSCHCVAVDVEGRCY-TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + AV+ G +WGR E GQLGHGD R PT +S I G +TV
Sbjct: 55 CSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV 114
Query: 124 VVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSS 178
++ G + ++GW G+LG G + P P+R L + +++ C L+
Sbjct: 115 ARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC-----LAV 169
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+L+ G Q G+LG GT TKDS V P+ I A G I VA G
Sbjct: 170 TMENKVLSWGRNQNGELGLGT-----TKDSHV---------PQKILAFEGIRIKMVAAGA 215
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+VA+ G +Y WG+G YG LG + D +P +V++ V+ +S G ++
Sbjct: 216 EHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-----VSCGWRHTI 270
Query: 299 CTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLS 329
+ G LY W K G +D + P+ + LS
Sbjct: 271 SISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALS 307
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT+L G DI V+ C + + VA G+ Y+WG + G+LGHGD P +
Sbjct: 92 PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 149
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L +IK+ G H + VT + L++G N++G+LG G+ ++ P + +
Sbjct: 150 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 209
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A GA+ +V ++ E + G +YG LG G N+ +L E
Sbjct: 210 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 252
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ G+ IV V+CG HT+++ S G +YT G+ YG+LGH + +D VPR+V
Sbjct: 253 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 306
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG SHTV + L+ + L I + P R L S+V A+A
Sbjct: 19 AGASHTVAL------LSKQFESSEMLARFLISTPLLPESWR-LCSKVNASAV-------- 63
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ G + + G + GQLGHG +T D + P ++A G+ IV V C
Sbjct: 64 -NFPGNVVCSWGRGEDGQLGHG-----DTDDRLL---------PTKLSAFDGQDIVSVTC 108
Query: 237 GTNHTVAVDSKGY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G ++TVA G VY+WG+G +GRLGH + D ++P + Q + IS G
Sbjct: 109 GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRI----KQISCGDC 164
Query: 296 NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
+ ++ WG+ +N D P+ ++ G ++ + +G H + D
Sbjct: 165 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED 224
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG +YG LG G + +P+KV+I +G ++ V+CG+ H++ I
Sbjct: 225 GDLYGWGWGRYGNLGLGDTNDR--LIPEKVNI-DGDKIVMVSCGWRHTISI 272
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQ 191
++G + GQLG G + + P+ + ++ + CGAD+TV S G + + G
Sbjct: 72 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV-ARSKSGKDVYSWGWGD 130
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+G+LGHG ++ P I AL G I +++CG H +AV + V
Sbjct: 131 FGRLGHGDPSDLFI--------------PHPIRALQGLRIKQISCGDCHCLAVTMENKVL 176
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
+WG G LG KD VP+++ F+ + +++AG+ +S G LY WG
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAEHSVAITEDGDLYGWGW 232
Query: 311 -KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
+ N G +D + P+ +++ G + + G H + + + G ++YG+LG+
Sbjct: 233 GRYGNLGLGDTNDRLIPEK-VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGH 291
Query: 365 GPYGQKSSAMPKKVDIL 381
G + + +P+KV L
Sbjct: 292 GDF--EDCLVPRKVQAL 306
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 236 CGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
C + AV+ G V +WG G G+LGH + D +P ++ F +++ +V
Sbjct: 55 CSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVTCGAD 111
Query: 295 VNSSCTAGGGQLYMWG-----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+ + G +Y WG +L +GD D P P+ L G ++ + G+ H V
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRL-GHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT 170
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++ +SWG Q GELG G K S +P+K+ EG+ + VA G HS+ I +
Sbjct: 171 MENKVLSWGRNQNGELGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 223
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 31/184 (16%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
++ ++ G +HTVA+ SK + + E + R F + L PE+
Sbjct: 14 VLLISAGASHTVALLSKQF----------------ESSEMLAR----FLISTPLLPESWR 53
Query: 291 SAGSVNSSCTAGGGQLYM-WGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
VN+S G + WG+ ++ + DD + P L G ++ + G +
Sbjct: 54 LCSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 113
Query: 344 FVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ S SWG +G LG+G +P + L+G+ + ++CG H L +
Sbjct: 114 VARSKSGKDVYSWGWGDFGRLGHGD--PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171
Query: 402 RTNV 405
V
Sbjct: 172 ENKV 175
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 32/287 (11%)
Query: 50 LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
LRP+ + ++F+AA H +A+ G Y+WG N+RGQLGH + + P ++
Sbjct: 398 LRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIE 457
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K++ A H+ V+T+ G AFG N GQLG +++ P V+ +E++
Sbjct: 458 SLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEIS 517
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG T+ ++ G + G YGQLG G + + +K+A ++
Sbjct: 518 MVACGLYHTIICTATGG--LFACGKNDYGQLGLGHNRQ-------IKVA--------SLV 560
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L E + VA G H+V V + G +++G YG+LG + + VP V + ++
Sbjct: 561 SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMV 620
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPL 325
+ G ++ + GQ++++G+ L N G D + P PL
Sbjct: 621 RA----TCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPL 663
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 31/342 (9%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
+ G Y+ G+N G+LG GD I+R + T +S I++ +G V+T DG L
Sbjct: 318 EASGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLT 377
Query: 134 FGWNKHGQLGSGSIRNEIEP-SPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGL 189
G NK GQ G G + PV+ L S+ A + G + + L+ + + G
Sbjct: 378 CGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALT--DSGLAYSWGY 435
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
GQLGH E T V P+ I +L + + + +H+ + G
Sbjct: 436 NDRGQLGH----ENLTTKVHV---------PKLIESLKDKKLRYASVSYHHSAVITDSGE 482
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS-SCTAGGGQLYM 308
+Y +G G+LG + + P+ V F+ + ++++ G ++ CTA GG
Sbjct: 483 LYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEI----SMVACGLYHTIICTATGGLFAC 538
Query: 309 ----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
+G+L + + L+ L + + SG H V +S S+G YG+LG
Sbjct: 539 GKNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLG 598
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G + +P V + ++ CG H++++ ++ V
Sbjct: 599 IG--NKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQV 638
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + G Y +G N+ GQLG + P +V +I G HT++ T
Sbjct: 473 HSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTAT 532
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G A G N +GQLG G R +I+ + + L +E V+ A G +V +++ +
Sbjct: 533 GGLFACGKNDYGQLGLGHNR-QIKVASLVSLPNEMVSYVASGYYHSVVVTN--SGRTFSF 589
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YGQLG G N P +A A +V+ CG HTV + +
Sbjct: 590 GRNDYGQLGIGNKVHQNV--------------PNVVALSANTRMVRATCGCYHTVLLSEQ 635
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
G V+ +G G+LG+R D +P + V N
Sbjct: 636 GQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 670
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ +VA+G H V V GR +++GRN+ GQLG G+K+ ++ P +V+ + ++ +A
Sbjct: 567 VSYVASGYY--HSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATC 624
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
G HTV+++E G FG N GQLG+ + + P P++
Sbjct: 625 GCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLK 664
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ ++V L + ++ G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E PS V+ L + ++ A GA L+ + G +YGQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGAWHC--LAVDDQGRAYAWGGNEYGQCG--- 124
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E +KD + + P+ A T+ +VA G H+V + +GYV+TWG
Sbjct: 125 --EEPSKDETGRPVRRDIVIPKRCAQQL--TVRQVAAGGTHSVVLTREGYVWTWG----- 175
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
W P +++ V R L +I+ G+ ++ G L+ WG +
Sbjct: 176 --------QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227
Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
GD YP P+ L L + +G H + + WG ++G LG+G +
Sbjct: 228 LGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDK 287
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S +P+KV++L G +I V+CG HS+ +
Sbjct: 288 SSKMLPQKVNLLPGEDIIQVSCGGTHSVAL 317
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 44/279 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
+P+ ++ L +++ V A + HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 81 TPSLVKSLA--NVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
D + +++ AG +H+VV+T +G + W G I+ P V+
Sbjct: 139 DIVIPKRCAQQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISVPVRVQG 194
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
L V A GA L+ E ++ G +YGQLG G + QP
Sbjct: 195 L-ENVRLIAVGAFHN--LALKEDGTLWAWGNNEYGQLGTG----------------DTQP 235
Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
R P + L T+V +A G H+ A+ ++G VY WG G +GRLG ++ + +P++
Sbjct: 236 RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 275 VDVFQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGK 311
V N+LP E +I S G +S G+++ +G+
Sbjct: 296 V------NLLPGEDIIQVSCGGTHSVALTRDGRIFSFGR 328
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 62/379 (16%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKK 114
++R V G S + +A+ +G+ +TWG N+RG LGH + + + P++V L+ KI +
Sbjct: 38 FNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
A G H + V + G + A+G N++GQ G ++E PVR + V C TV
Sbjct: 96 AAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAQQLTV 152
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAAL 226
+ AG GT + T++ V + P P + L
Sbjct: 153 --------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGL 195
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E + +A G H +A+ G ++ WG YG+LG + + P V ++
Sbjct: 196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD- 252
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
I+AG +S+ G++Y WG+ + N+ M P+ + L G ++ +
Sbjct: 253 ---IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSC 309
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGMH--------- 385
G H + D S+G +G LGYG GQ +P + EG
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIHIPPPEGRFNHTDEEDDG 368
Query: 386 ---VISVACGYGHSLVIVD 401
VACG H+L IV+
Sbjct: 369 KWIAKHVACGGRHTLAIVE 387
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 182 ASILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY----------- 214
S++ G + GQLG GTD E +N + S LA
Sbjct: 5 TSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64
Query: 215 ------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ + P + +LA IV+ A G H +AVD +G Y WG YG+ G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYMWGKLKNN 315
KDE R V +R+ V+P ++AG +S G ++ WG+
Sbjct: 125 EEPSKDE-TGRPV---RRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM 374
GD P+ N+R + G H+ + D + +WG+ +YG+LG G +S +
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI 240
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVP 434
P V L+ + ++ +A G HS + TN GE G+ DN D++S +
Sbjct: 241 P--VQGLDDLTLVDIAAGGWHSTAL---TNEGEVYGWGRGEHGRLGFGDN---DKSSKML 292
Query: 435 PKK 437
P+K
Sbjct: 293 PQK 295
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L ++R +A G + H +A+ +G + WG NE GQLG GD R P V
Sbjct: 189 PVRVQGLE--NVRLIAVG--AFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
L + AG H+ +T +G +G +HG+LG G +++ P V L E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDI 304
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ I + G +G+LG+G T ++L P
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIHIPPPEGRF 359
Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
G+ I K VACG HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
++P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LTPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H+V + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G N N Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDTGEVYGWGYNGNGQLGLG--NNVN------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ +V L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA--DGEVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNVNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 36/309 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VTED FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H+VA+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLS 329
N L + V I+ G +S G++Y WG N N + + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALH 231
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 232 SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPTHIMVEKERVVE 288
Query: 389 V-ACGYGHS 396
+ AC H+
Sbjct: 289 IAACHSAHT 297
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K PT
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPT 277
Query: 103 IVSELSKYKIKKAGAGRSHT 122
+ + ++ A +HT
Sbjct: 278 HIMVEKERVVEIAACHSAHT 297
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 IVPKKLEALCGKKIKSLSYG-SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V + ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL ++++ CG HT+A+ +G +Y WG YG+LG + + P ++ V ++
Sbjct: 226 RVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT FG N LG+G ++ I P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G VY WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V+S G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G KS+ + ++E V+
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPCRVAALHSVCVLQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAQIMVEKERVVEIAACHSAHT 297
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 166/393 (42%), Gaps = 50/393 (12%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+L G + +G GA D + P L P G + +AAG H +A+ G
Sbjct: 57 TVLAWGDNLFGQLGDGTGA-DSDTPIPVSLPP--GTTVTAIAAG--DEHSLALTSTGTVL 111
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WGRN GQLG R P VS + AGRSH++ +T G++LA+G N G
Sbjct: 112 AWGRNRFGQLGDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITSTGSALAWGRNFSG 171
Query: 141 QLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
QLG G+ + +P V + VTA A G ++ ++S A L G GQLG GT
Sbjct: 172 QLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGTA--LAWGRNFAGQLGDGT 229
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
N+ T P ++ G T+ +A G H++A+ S G WG G G
Sbjct: 230 TNDSTT--------------PVTVSVAPGTTVTDIAAGRVHSLAITSAGTALGWGRNGSG 275
Query: 260 RLG-----------HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY- 307
+LG V V + +++ AV SAG + A G LY
Sbjct: 276 QLGDGTTNDSTTPTTVSPPTGTVFTTVAAGEDHSL----AVTSAG----TALAAGDNLYG 327
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
G N + L + + + G H+ V A + ++WG G+LG G
Sbjct: 328 QLGDGTNTSSNTFVTVSLPPST--TITAIAVGRFHNLGVTATGAALAWGINIDGQLGDGT 385
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+++ P+ VD+ +VA G+GHSL +
Sbjct: 386 TTNRNT--PQAVDLPVST---TVAGGFGHSLAL 413
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 33/233 (14%)
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S+V ++L G +GQLG GT + +T P ++ G T+ +A
Sbjct: 51 STVGSDTVLAWGDNLFGQLGDGTGADSDT--------------PIPVSLPPGTTVTAIAA 96
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP---EAVISAG 293
G H++A+ S G V WG +G+LG P V LPP I+AG
Sbjct: 97 GDEHSLALTSTGTVLAWGRNRFGQLGDETNTSRSTPVTVS-------LPPGTTVTAIAAG 149
Query: 294 SVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+S G WG+ + +D P + G + + +G+ H V
Sbjct: 150 RSHSLAITSTGSALAWGRNFSGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVT 209
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ + ++WG G+LG G S P V + G V +A G HSL I
Sbjct: 210 SAGTALAWGRNFAGQLGDG--TTNDSTTPVTVSVAPGTTVTDIAAGRVHSLAI 260
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 124/277 (44%), Gaps = 26/277 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 10 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 69
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 70 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 129
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 130 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 172
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + F N PP+
Sbjct: 173 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDVDS 232
Query: 291 SAGSVNSSCTAGGGQLY-MWGKLKNNG--DDWMYPKP 324
+GG Q + + +N G DD+ P P
Sbjct: 233 EEYFCVKRIFSGGDQSFSHYASPQNCGPPDDFRCPDP 269
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 54 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 111
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 112 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 171
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 172 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 205
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 64
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 65 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 106
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 107 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 162
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R I +L+ IV+VACG H++A+ V+ WG YG+LG + K + P+ +
Sbjct: 3 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI---- 58
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
++ + P ++AG +S G ++ WG+ K N+ +D P L L +
Sbjct: 59 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI 118
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + + ++G YG+LG+ + + P+KV L G V +ACG
Sbjct: 119 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQIACG 176
Query: 393 YGHSLVIV 400
H+ V
Sbjct: 177 RQHTSAFV 184
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 73/332 (21%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSL-AF 134
+ Y+WG N GQ + PT V +L +++ +G SH + + GN + A+
Sbjct: 97 QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYG 193
G N+ GQLG+G N P+P+ V T+ +CGA ++ LS+ + + G G
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNY--GELYSWGCGTGG 214
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+ GHG++ P+ ++AL G+ I +A G H+ A D +G VYTW
Sbjct: 215 RTGHGSE--------------APSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTW 260
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G+ YG+LG+ K P ++ ++++V+ ++ G ++ G +Y
Sbjct: 261 GWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVK----VTCGKNHTHLLTAEGHIY------ 310
Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
S+G G+LG G Y S
Sbjct: 311 ---------------------------------------SFGFNVCGQLGVGGYAD--SQ 329
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKVD+ E H + + GY H+L + ++ NV
Sbjct: 330 QPKKVDLPE--HAVDIVSGYYHTLCLTNKGNV 359
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +PT + + F + C + H +A+ G Y+WG G+ GHG + P
Sbjct: 171 NRATPTPIA--IATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSLSPQ 228
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
+VS L +I G H+ G+ +GWNK+GQLG+ + + + P+ +R +
Sbjct: 229 VVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKLRDMEKH 288
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V CG + T L++ EG I + G GQLG G Y +P+
Sbjct: 289 HVVKVTCGKNHTHLLTA-EG-HIYSFGFNVCGQLGVG--------------GYADSQQPK 332
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ E V + G HT+ + +KG VY+WG+ G LG
Sbjct: 333 KVD--LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALG 371
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+SP + LVG I +A G + H A D+ G YTWG N+ GQLG+ + P +
Sbjct: 225 LSPQVVSALVGKQITSMAGGML--HSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKL 282
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------ 158
++ K+ + K G++HT ++T +G+ +FG+N GQLG G + +P V
Sbjct: 283 RDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEHAVD 342
Query: 159 LVSEVTATAC---GADFTVWLSSVEGASIL-----NAGLPQYGQLGHGTDNEYNTKDSSV 210
+VS T C + W +GA L + P+ L H N ++ DS
Sbjct: 343 IVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIPLSHIRHNYSDSMDSYN 402
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDE 269
+ YE+ G+ K+A G ++ + + G +Y +GFG R+G+ +D+
Sbjct: 403 SI-YESGGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQ 461
Query: 270 WVPRRV 275
+P +V
Sbjct: 462 DIPCQV 467
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYG-SGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 226 RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA--DGELFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L++ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 276 PTQIMVEKERVIEIAACHSTHT 297
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 136/305 (44%), Gaps = 36/305 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G WG N GQLG G QR P VS L+ + +G H + + D
Sbjct: 456 HSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNV-VALSGGKLYHALALLSD 514
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G+N +GQLG GS N P V L + V A A G D+++ L S ++ + G
Sbjct: 515 GTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL-TNVVAIAAGGDYSLALQS--NGTVQSWG 571
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YG LG +Y+T P P+A+ + +V +A G NH +A+ + G
Sbjct: 572 YGVYGPLGR----DYDTY----------SPTPKAVPGV--TNVVAIAAGANHVLALRADG 615
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG +G+LG P V V NV+ I+ G +S G +Y
Sbjct: 616 TVYAWGRNDFGQLGDGTTVQRNTP--VQVPGLTNVV----AIATGWDHSLALRADGTVYA 669
Query: 309 WG----KLKNNGDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
WG + +G Y P P+ L+ N+ + +G S + +WG +G
Sbjct: 670 WGYNYARQLGDGSTANYRQTPAPVPGLT--NVVAVTAGGNQSLALLSSGAVHAWGDNSHG 727
Query: 361 ELGYG 365
ELG G
Sbjct: 728 ELGNG 732
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 151/348 (43%), Gaps = 40/348 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA + H +A+ +G WG N GQLG G QR P V+ L + AG
Sbjct: 147 VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTP--VAVLGLTGVVAIAAGE 204
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+H++ V DG A+G N +G+LG G+ P V L + VTA A GA+ + L+ +
Sbjct: 205 NHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSL-TGVTAIAAGANHS--LAVL 261
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G G+LG GT + T P A+ L G + +++ G
Sbjct: 262 ADGTVRAWGYNASGRLGDGTTTQRAT--------------PVAVPGLTG--VTEISAGGG 305
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++A+ + G WG G+LG + P V L SAG +S
Sbjct: 306 HSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLTGVTAL------SAGGNHSLA 359
Query: 300 TAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
G WG + GD P L L+G + + +G H V A+ +
Sbjct: 360 LLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTG--VAALAAGGYHSLAVLANGTVR 417
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+WGH YG+LG G Q+++ P V L G V+S+ GY HSL ++
Sbjct: 418 AWGHNTYGQLGDGSTAQRTA--PVVVPALTG--VVSLTAGYDHSLALL 461
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 164/365 (44%), Gaps = 45/365 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N SP + L GV ++AG H +A+ +G WG N GQLG G QR P
Sbjct: 334 NRTSPVLVSSLTGVTA--LSAG--GNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPV 389
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ L+ + AG H++ V +G A+G N +GQLG GS P V L
Sbjct: 390 GLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGV 447
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V+ TA G D + L+ + ++ G GQLG GT N+ T P
Sbjct: 448 VSLTA-GYDHS--LALLSDGTVRAWGNNASGQLGDGTTNQRGT--------------PVQ 490
Query: 223 IAALAGETIVKVACG-TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
++ L +V ++ G H +A+ S G V WG+ G+LG + W P V V
Sbjct: 491 VSGL--TNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTP--VAVSGLT 546
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRC 335
NV+ I+AG S G + WG L + D + PK + ++ N+
Sbjct: 547 NVV----AIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVT--NVVA 600
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ +G H + AD + +WG +G+LG G Q+++ P +V L +V+++A G+
Sbjct: 601 IAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNT--PVQVPGLT--NVVAIATGWD 656
Query: 395 HSLVI 399
HSL +
Sbjct: 657 HSLAL 661
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 151/357 (42%), Gaps = 40/357 (11%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
RPL R V H + +G WG N GQLG G QR PT V L+
Sbjct: 38 RPLRSGSPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGA 97
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
AG +++ + DG A+G N +GQLG G+ + P V L S V A A G
Sbjct: 98 VAVSAGG--EYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGL-SGVVAIAAGN 154
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ L+ + ++ G YGQLG GT + T P A+ L G
Sbjct: 155 NHA--LALLSDGTVRAWGYNAYGQLGDGTTTQRRT--------------PVAVLGLTG-- 196
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+V +A G NH++AV + G V WG YGRLG P V + L I
Sbjct: 197 VVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLV------SSLTGVTAI 250
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMDSGNMHHF 344
+AG+ +S G + WG + GD P + L+G + + +G H
Sbjct: 251 AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTG--VTEISAGGGHSL 308
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ AD + +WG G+LG G ++S P V L G V +++ G HSL ++
Sbjct: 309 ALLADGTARAWGSNVSGQLGDGTVSNRTS--PVLVSSLTG--VTALSAGGNHSLALL 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 162/412 (39%), Gaps = 95/412 (23%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + L GV VA H +AV +G WG N G+LG G QR P +VS
Sbjct: 187 TPVAVLGLTGV----VAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVS 242
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--------- 156
L+ AGA +H++ V DG A+G+N G+LG G+ P V
Sbjct: 243 SLTGVTAIAAGA--NHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTGVTEI 300
Query: 157 -------RCLVSEVTATACGADFT--------------VWLSSVEGASILNA-------- 187
L+++ TA A G++ + V +SS+ G + L+A
Sbjct: 301 SAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLTGVTALSAGGNHSLAL 360
Query: 188 ---------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G GQLG GT + + P + L G + +A G
Sbjct: 361 LADGTARAWGANVSGQLGDGTTTQ--------------RTLPVGLPGLTG--VAALAAGG 404
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H++AV + G V WG YG+LG P V L ++AG +S
Sbjct: 405 YHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVP------ALTGVVSLTAGYDHSL 458
Query: 299 CTAGGGQLYMWGKLKNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMHHFVG--A 347
G + WG NN + P + L+ N+ + G ++H + +
Sbjct: 459 ALLSDGTVRAWG---NNASGQLGDGTTNQRGTPVQVSGLT--NVVALSGGKLYHALALLS 513
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D + +WG+ G+LG G + + P V L +V+++A G +SL +
Sbjct: 514 DGTVRAWGYNMNGQLGDGSTSNRWT--PVAVSGLT--NVVAIAAGGDYSLAL 561
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++ +AAG H +A+ +G Y WGRN+ GQLG G +QR+ P V L+ +
Sbjct: 597 NVVAIAAGA--NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLT--NVVAIA 652
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVW 175
G H++ + DG A+G+N QLG GS N + P+PV L + V TA G
Sbjct: 653 TGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGNQSLAL 712
Query: 176 LSSVEGASILNAGLPQYGQLGHGT 199
LSS ++ G +G+LG+G+
Sbjct: 713 LSS---GAVHAWGDNSHGELGNGS 733
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 226 RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA--DGELFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L++ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 276 PTQIMVEKERVIEIAACHSTHT 297
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 160/381 (41%), Gaps = 53/381 (13%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
K + ++++P L V +D+ + G H V +G +TWG G+LGHG ++
Sbjct: 232 KETVKTDVLTPRPLESNVVLDVHQIVCGVR--HVALVTRQGEVFTWGEEVGGRLGHGIQV 289
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS 154
RP +V L+ I G HT VV+ G+ ++G H G LG GS + P
Sbjct: 290 DISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPK 349
Query: 155 ----PVRCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ L +V + ACG W S++ A+ + G +G LGHG
Sbjct: 350 RVSGPLEGL--QVLSVACG----TWHSALATANGKLFTFGDGAFGVLGHGN--------- 394
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGY 258
E+ P+ + +L G VKVAC HT A+ S ++TWG G
Sbjct: 395 -----RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDK 449
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLK 313
RLGH ++ +P V N I+ G + G ++ G+L
Sbjct: 450 NRLGHGNKETYLLPTCVSSLIDYNF----HKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505
Query: 314 NNGDDWMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKS 371
N+ D P + D L G + + G+ H + + S +WG G LG+G K
Sbjct: 506 NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 565
Query: 372 SAMPKKVDILEGMHVISVACG 392
+ P V+ L HV S++CG
Sbjct: 566 T--PTCVEALRDRHVKSLSCG 584
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + ++ CG H V +G V+TWG GRLGH Q D P+ V+
Sbjct: 242 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA 301
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++ G ++ + G L+ WG L +G D W+ + L G
Sbjct: 302 LTNI----DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEG 357
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H A+ ++G +G LG+G ++S + PK+V L G+ + V
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKV 415
Query: 390 ACGYGHSLVIVD 401
AC H+ IV+
Sbjct: 416 ACSIWHTAAIVE 427
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 89/214 (41%), Gaps = 39/214 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVA-VDVEG---------RCYTWGRNERGQLGHGDKI 96
P ++ L G ++ V C H A V+V G + +TWG ++ +LGHG+K
Sbjct: 401 PKEVQSLNG--LKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKE 458
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
PT VS L Y K G + TV +T G+ G HGQLG N I +
Sbjct: 459 TYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-----NSISDGKL 513
Query: 157 RCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
CLV + V ACG L+S + + G G+LGHG + T
Sbjct: 514 PCLVQDRLVGEFVEEIACGDHHVAVLTS--RSEVFTWGKGANGRLGHGDTEDKRT----- 566
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + ++CG+N T ++
Sbjct: 567 ---------PTCVEALRDRHVKSLSCGSNFTSSI 591
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 113/263 (42%), Gaps = 31/263 (11%)
Query: 41 DGNLVSPTRLRPLVGVD----------------IRFVAAGCVSCHCVAVDVEGRCYTWGR 84
DG L + + RP++ +D VA C S H +A+ G Y+WG
Sbjct: 13 DGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAASGAVYSWGW 72
Query: 85 NERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
GQLGHGD + P + E + K+ G H+ VT+DG +G + GQL
Sbjct: 73 GSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLYMWGESHWGQL 132
Query: 143 GSGSIRNEIEPS-PVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G S PV C + E + +CG T L++ I G GQL
Sbjct: 133 GLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRVYIWGRG--DSGQL 190
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G+ NT+D S+ RP+ + GE +V+VACG H+ AV KGYVY W
Sbjct: 191 GIGSTWFNNTEDESLL----RTSRPQLLDGFNGERVVQVACGAFHSAAVTEKGYVYIWXK 246
Query: 256 GGYGRLGHREQKDEWVPRRVDVF 278
YG LG + D P+ F
Sbjct: 247 EDYGMLGIGQSSDXQNPKSASSF 269
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+++ G GQLG G V A P+ I L E +V V+CG+ HT+
Sbjct: 4 AVITFGCNDDGQLGTGAKRRPMLAIDGVS----AANFPQNIDGLQDEEVVAVSCGSRHTM 59
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
A+ + G VY+WG+G G+LGH + K +P++V F++N + IS G +S+
Sbjct: 60 ALAASGAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGL--KVNYISCGGCHSAAVTK 117
Query: 303 GGQLYMWGKL---------KNNGDDWMYPKPLMDLSGWNLRCM---DSGNMHHFVGADSS 350
G LYMWG+ ++ P G C+ G H +
Sbjct: 118 DGTLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHG 177
Query: 351 CIS-WGHAQYGELGYGPYGQKSS--------AMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG G+LG G ++ + P+ +D G V+ VACG HS + +
Sbjct: 178 RVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVTE 237
Query: 402 RTNV 405
+ V
Sbjct: 238 KGYV 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 37/254 (14%)
Query: 81 TWGRNERGQLGHGDKIQ----------RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
T+G N+ GQLG G K + + P + L ++ G HT+ + G
Sbjct: 7 TFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAASGA 66
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNA 187
++GW GQLG G +++ P V +V +CG + + + ++
Sbjct: 67 VYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSA--AVTKDGTLYMW 124
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +GQLG ++E + V+ P P L E IVKV+CG HT A+ +
Sbjct: 125 GESHWGQLGLPKEHEAAHESLPVEC-----PMPE---GLTKECIVKVSCGGTHTAALTNH 176
Query: 248 GYVYTWGFGGYGRLG-----HREQKDEWV-----PRRVDVFQRNNVLPPEAVISAGSVNS 297
G VY WG G G+LG +DE + P+ +D F V+ ++ G+ +S
Sbjct: 177 GRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQ----VACGAFHS 232
Query: 298 SCTAGGGQLYMWGK 311
+ G +Y+W K
Sbjct: 233 AAVTEKGYVYIWXK 246
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 13/123 (10%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK----------IQRDRPTIVSELSK 109
V C H A+ GR Y WGR + GQLG G ++ RP ++ +
Sbjct: 160 IVKVSCGGTHTAALTNHGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNG 219
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTAT 166
++ + G H+ VTE G + +G LG G + P +S +
Sbjct: 220 ERVVQVACGAFHSAAVTEKGYVYIWXKEDYGMLGIGQSSDXQNPKSASSFFDDISXIXVY 279
Query: 167 ACG 169
CG
Sbjct: 280 PCG 282
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 58 IRFVAAGCVS---C---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
+ F + CV C H +A G Y WG GQLG GD+ P + L K
Sbjct: 923 VIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMH 982
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ + AG +HT+VV + G + FG + GQLG+G ++ + P+ ++ + S V A ACG
Sbjct: 983 VTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSIVQA-ACGYC 1041
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T L+ E + G GQLGH DN N + + P+ + L G+ I
Sbjct: 1042 HTALLT--EAGEVYTCGSAMSGQLGHA-DNLQNDRLA-----------PKMVEGLNGKRI 1087
Query: 232 VKVACGTNHTVAVDSKGYVYTWG--FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE-A 288
+ACG+ HT+A+ VYTWG G R+++ + +RV ++ +
Sbjct: 1088 RFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRIS 1147
Query: 289 VISAGSVNSSCTAGGGQLYMW 309
++S G +S T G++Y+W
Sbjct: 1148 LVSCGHAHSVATTMDGEVYVW 1168
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKAGAGRS 120
VSC HC A+ G YTWGRN G+LGHGDK + + P V +K+ G
Sbjct: 880 VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSV 179
HT+ TE G+ +G + GQLG G P P++ L VT A G T+ + +
Sbjct: 940 HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVV--L 997
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ ++ G + GQLG G KD V +A P +IV+ ACG
Sbjct: 998 KSGEVMVFGGGEVGQLGTGMR-----KDLLVPTKLQAMP-----------SIVQAACGYC 1041
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT + G VYT G G+LGH + Q D P+ V+ + I+ GS ++
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRI----RFIACGSFHT 1097
Query: 298 SCTAGGGQLYMWGKLKNNGDD 318
+Y WG ++ D
Sbjct: 1098 IAITDLDNVYTWGGVQGTDSD 1118
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 24/264 (9%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K GE++ G VG+ + +L+ PT+L+ + + V A C CH + G
Sbjct: 998 KSGEVMVFGG---GEVGQLGTGMRKDLLVPTKLQAMPSI----VQAACGYCHTALLTEAG 1050
Query: 78 RCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
YT G GQLGH D +Q DR P +V L+ +I+ G HT+ +T+ N +G
Sbjct: 1051 EVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG 1110
Query: 136 WNKHGQLGSGSIRNE--------IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASIL- 185
G G++R E + PS V+ L+ + ++ +CG +V ++++G +
Sbjct: 1111 -GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSV-ATTMDGEVYVW 1168
Query: 186 -NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G Q L G+ + + L A P + A + + A G T+ V
Sbjct: 1169 SSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ--DAKSKPVVKHAAAGEEFTLVV 1226
Query: 245 DSKGYVYTWGFGGYGRLGHREQKD 268
G +Y+WG G +G+LG +Q D
Sbjct: 1227 TENGLLYSWGSGAFGQLGLGDQGD 1250
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 33/305 (10%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
+S ++ G +H +TE+G+ +G N G+LG G S ++ P V S+ V
Sbjct: 872 VSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCV 931
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG + T L+ E S+ G + GQLG G D ++ P I
Sbjct: 932 KEVVCGGEHT--LARTESGSVYGWGNGRIGQLGLG--------DRTLHWL------PVPI 975
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD----VFQ 279
L + ++A G HT+ V G V +G G G+LG +KD VP ++ + Q
Sbjct: 976 KTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSIVQ 1035
Query: 280 RNNVLPPEAVIS-AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
A+++ AG V + +A GQL G N +D + PK + L+G +R +
Sbjct: 1036 AACGYCHTALLTEAGEVYTCGSAMSGQL---GHADNLQNDRLAPKMVEGLNGKRIRFIAC 1092
Query: 339 GNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKV--DILEGM---HVISVACG 392
G+ H D + +WG Q + ++ +A+ K+V I++G+ + V+CG
Sbjct: 1093 GSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCG 1152
Query: 393 YGHSL 397
+ HS+
Sbjct: 1153 HAHSV 1157
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
+V V+CG NH A+ G+VYTWG G G LGH ++ + P++V F+ V +
Sbjct: 877 VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCV---KE 933
Query: 289 VISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
V+ G ++ G +Y WG L + W+ P P+ L ++ + +G
Sbjct: 934 VVCGGE-HTLARTESGSVYGWGNGRIGQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYA 991
Query: 342 HHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H V S + +G + G+LG G +K +P K+ + ++ ACGY H+ ++
Sbjct: 992 HTIVVLKSGEVMVFGGGEVGQLGTG--MRKDLLVPTKLQAMPS--IVQAACGYCHTALL- 1046
Query: 401 DRTNVGERLDQLDVYDGKASSQDNEEIDR 429
T GE G+ DN + DR
Sbjct: 1047 --TEAGEVYTCGSAMSGQLGHADNLQNDR 1073
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 29/260 (11%)
Query: 155 PVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
P LVS +V +CG + L+ E + G G+LGHG +
Sbjct: 867 PFGGLVSMRQVVNVSCGWNHCAALT--ENGHVYTWGRNGSGELGHGDKSGV--------- 915
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
Q P+ + + + +V CG HT+A G VY WG G G+LG ++ W+P
Sbjct: 916 ---PQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLP 972
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLM 326
+ ++ +V ++AG ++ G++ ++G ++ G D + P L
Sbjct: 973 VPIKTLRKMHV----TQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ 1028
Query: 327 DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
+ ++ G H + ++ + G A G+LG+ Q PK V+ L G
Sbjct: 1029 AMP--SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKR 1086
Query: 386 VISVACGYGHSLVIVDRTNV 405
+ +ACG H++ I D NV
Sbjct: 1087 IRFIACGSFHTIAITDLDNV 1106
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 19/271 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP + + + I+ +A G +A + G Y+WG N GQLG GD+I R++PT ++
Sbjct: 96 SPVQFSIDIKISIKTIACGDSHTLAIAENPYG-LYSWGCNRWGQLGLGDQINRNQPTRIN 154
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+ G H+++V+ G FG G+LG G +P+ V LV +
Sbjct: 155 HSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGK-QI 213
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+CGA I + G +YGQLG G SVK ++ + +
Sbjct: 214 VSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTG----------SVK-SHTLPAKMKETQI 262
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ VKV CG NHT+A+ + G + ++GF G+LG D+ P +++ ++ VL
Sbjct: 263 TSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQINPTKIEFSEK--VLD 320
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
I+ G +S C G+ Y WG + + G
Sbjct: 321 ----IATGYYHSLCVTDNGEAYSWGYMSDGG 347
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
FVA C S H + V G YT+G G+LG GD+ R +PT+VS L +I GAG
Sbjct: 161 FVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGV 220
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA------TACGADFT 173
H+ V G +FGWN++GQLG+GS+++ P+ ++ +++T+ CG + T
Sbjct: 221 MHSSCVDSTGKIYSFGWNRYGQLGTGSVKSHTLPAKMK--ETQITSKMHFVKVVCGKNHT 278
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ LS+ +++ G GQLG G ++ Q P I E ++
Sbjct: 279 LALSN--NGEMVSFGFNACGQLGVG--------------SHLDQINPTKIE--FSEKVLD 320
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+A G H++ V G Y+WG+ G LG E
Sbjct: 321 IATGYYHSLCVTDNGEAYSWGYMSDGGLGLSE 352
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 136/330 (41%), Gaps = 70/330 (21%)
Query: 76 EGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL- 132
+G Y+WG N GQ G+G I P S K IK G SHT+ + E+ L
Sbjct: 70 DGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYGLY 129
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
++G N+ GQLG G N +P+ + + A ACG+ ++ +S+ + G
Sbjct: 130 SWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNF--GELYTFGCGT 187
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LG G D S + +P +++L G+ IV G H+ VDS G +Y
Sbjct: 188 TGRLGLG--------DESPRF------KPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIY 233
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++G+ YG+LG K +P ++ Q + + V+ + +
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLA------------- 280
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
L NNG+ +S+G G+LG G + +
Sbjct: 281 LSNNGE---------------------------------MVSFGFNACGQLGVGSHLDQI 307
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ P K++ E V+ +A GY HSL + D
Sbjct: 308 N--PTKIEFSE--KVLDIATGYYHSLCVTD 333
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 125/308 (40%), Gaps = 89/308 (28%)
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGAS 183
EDG ++G+N GQ G+G + I PSPV+ + + ACG T+ ++
Sbjct: 69 EDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAE-NPYG 127
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ + G ++GQLG G N +P I T V +ACG+ H++
Sbjct: 128 LYSWGCNRWGQLGLGDQINRN--------------QPTRINHSDRATFVAIACGSQHSMI 173
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AGSVNSSCTA 301
V + G +YT+G G GRLG ++ + P V + L + ++S AG ++SSC
Sbjct: 174 VSNFGELYTFGCGTTGRLGLGDESPRFKPTVV------SSLVGKQIVSCGAGVMHSSCVD 227
Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
G++Y +G WN +YG+
Sbjct: 228 STGKIYSFG--------------------WN-------------------------RYGQ 242
Query: 362 LGYGPYGQKSSAMP---KKVDILEGMHVISVACGYGHSLVIVD-------------RTNV 405
LG G KS +P K+ I MH + V CG H+L + + + V
Sbjct: 243 LGTGSV--KSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGV 300
Query: 406 GERLDQLD 413
G LDQ++
Sbjct: 301 GSHLDQIN 308
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 72 PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 130
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H+V + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 131 NLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 190
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 191 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNVN------------QLTPVRV 234
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 235 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 293
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 294 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 321
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 36/309 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 18 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA 77
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 78 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 123
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H+VA+ + G V+ WG+ G++G ++ PR+V
Sbjct: 124 APIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 181
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLS 329
N L + V I+ G +S G++Y WG N N + + P + L
Sbjct: 182 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALH 238
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 239 SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVE 295
Query: 389 V-ACGYGHS 396
+ AC H+
Sbjct: 296 IAACHSAHT 304
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K P
Sbjct: 227 NQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPA 284
Query: 103 IVSELSKYKIKKAGAGRSHT 122
+ + ++ A +HT
Sbjct: 285 HIMVEKERVVEIAACHSAHT 304
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYG-SGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P + CL ++
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 226 RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA--DGELFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR I L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L++ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR++
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKI-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 276 PTQIMVEKERVIEIAACHSTHT 297
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
CVS H A+ G + WGR GQLG G P +S +K G SH
Sbjct: 83 CVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLS--FPMPVKALSCGGSH 140
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLS 177
++ +TEDG A G K GQLG+GS E SPV + E V A CG DF+V
Sbjct: 141 SLFITEDGRLYATGRGKEGQLGTGS--QESVLSPVEVQMPEGSGRVKAAECGKDFSVI-- 196
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ E + G YGQLG G Y P+ +A LAG+ + +A G
Sbjct: 197 ATESGQVFTFGSDDYGQLGLGQFARYAMT-------------PKEVAVLAGKNVRSIAAG 243
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
H AV S G +YTWG+G G+LG+ D +P V Q V
Sbjct: 244 DYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRV 289
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 128/327 (39%), Gaps = 78/327 (23%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
R Y WG LG G+ + P +++ + AG H + G+ +G
Sbjct: 55 RMYCWG-----LLGLGETLDVLYP---QKVNLEGVTCVSAGHRHAAAIVGGGDVFVWGRG 106
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ ++ P P+ V A +CG +++++ E + G + GQLG
Sbjct: 107 FSGQLGLGTNKSHFTPQPLS-FPMPVKALSCGGSHSLFIT--EDGRLYATGRGKEGQLGT 163
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA-CGTNHTVAVDSKGYVYTWGFG 256
G+ E+ P + G VK A CG + +V G V+T+G
Sbjct: 164 GSQ--------------ESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSD 209
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
YG+LG GQ +
Sbjct: 210 DYGQLGL----------------------------------------GQFARYA------ 223
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
M PK + L+G N+R + +G+ H V +D +WG+ + G+LG G ++P
Sbjct: 224 ---MTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNG--NTVDVSLP 278
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDR 402
V L+ + V SVACG H++ ++DR
Sbjct: 279 VLVRELQNLRVQSVACGCDHTVAVIDR 305
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L G ++R +AAG H AV +G+ YTWG GQLG+G+ + P +V
Sbjct: 224 MTPKEVAVLAGKNVRSIAAG--DYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLV 281
Query: 105 SELSKYKIKKAGAGRSHTVVVT----------------EDGNSLAFGWNKHGQLGSGSIR 148
EL +++ G HTV V E G G + GQLG G I
Sbjct: 282 RELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIV 341
Query: 149 NEIEPSPVRCLVSEVTATACGADFTV 174
P+ R + +V ACG T+
Sbjct: 342 E--SPAVYRSVPLQVQQVACGTSHTL 365
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRS 120
A C H + + +GR Y GR + GQLG G + P V ++K A G+
Sbjct: 133 ALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKD 192
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+V+ TE G FG + +GQLG G R + P V L + + D+ +
Sbjct: 193 FSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+G + G + GQLG+G NT D S+ P + L + VACG +
Sbjct: 253 DG-KLYTWGYGRSGQLGNG-----NTVDVSL---------PVLVRELQNLRVQSVACGCD 297
Query: 240 HTVAVDSKG 248
HTVAV +G
Sbjct: 298 HTVAVIDRG 306
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGA 117
R AA C V G+ +T+G ++ GQLG G + P V+ L+ ++ A
Sbjct: 183 RVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAA 242
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV-- 174
G H VT DG +G+ + GQLG+G+ + P VR L + V + ACG D TV
Sbjct: 243 GDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302
Query: 175 ----------WLSS--VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+SS +E + G + GQLG G E SV L +
Sbjct: 303 IDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQVQ------- 355
Query: 223 IAALAGETIVKVACGTNHTVA 243
+VACGT+HT+A
Sbjct: 356 ----------QVACGTSHTLA 366
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 33/333 (9%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG G+LG G ++ Q P + ++ + G SHT+ +T++G A G N
Sbjct: 4 YCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNN 63
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
HGQLG + P R E +T +CG ++ L++ + + G GQ
Sbjct: 64 DHGQLGH-DLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTN--WGQVFSWGSNAVGQ 120
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGH +N QP PR I A+ + +V++A G H +A+ + G +Y WG
Sbjct: 121 LGHDAEN-------------GRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 167
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
YG+LG ++ VP + V P A I+ G +S + G ++ WGK
Sbjct: 168 SNSYGQLGIGTTSEK-VPMPTLIQSLAGV--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
N+ + YP L L +R + G + F+ + + G +G+LG+G
Sbjct: 225 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG-- 282
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+KV L G + +ACG H+L V
Sbjct: 283 SCSNEIVPRKVFELMGSKITQIACGRRHTLAFV 315
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G G + PT ++ L GV I F+A G H AV G
Sbjct: 161 GELYAWGSNSYGQLG--IGTTSEKVPMPTLIQSLAGVPIAFIACG--GNHSFAVSKSGAI 216
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D R PT + L ++ G +V +T +G G
Sbjct: 217 FGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTF 276
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG GS NEI P V L+ S++T ACG T+ G I GL GQLG G
Sbjct: 277 GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLGGVGQLGIG 335
Query: 199 TDNEYNT 205
++T
Sbjct: 336 MVGNHST 342
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+LR L + +R+++ G V + EG +T G GQLGHG P V E
Sbjct: 238 PTQLRTLRSLGVRYISCG--DDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFE 295
Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L KI + GR HT+ V G FG GQLG G + N P VR
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 347
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 250 VYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+Y WG +G LG E++ VPR++D Q + V+ E G+ ++ G++Y
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVEC----GTSHTLFLTKEGKMY 58
Query: 308 MWG-----KLKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQY 359
G +L ++ D +P L L + + C+ G H + SWG
Sbjct: 59 ACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAV 118
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
G+LG+ + P+ + + HV+ +A G H L + TN GE
Sbjct: 119 GQLGHDAENGRQPT-PRMIKAIGAKHVVQIASGQYHCLAL---TNNGE 162
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 163/376 (43%), Gaps = 36/376 (9%)
Query: 52 PLVGVDI-RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-----------QRD 99
P + DI V C + H A+D Y WG N +LG D+ Q
Sbjct: 21 PHLISDISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIK 80
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRC 158
P V+ELS KI G +H+ + + N + +G ++G+LG+ ++ P
Sbjct: 81 IPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNG 140
Query: 159 LVS------EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
L E++ +CG + TV +V +N Q G+ +++ + K
Sbjct: 141 LKQPEGIQWEISEISCGENHTV---AVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKT 197
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWV 271
Y QP + G AC ++ T+A+D +G +++WG GG+ RLG++ E ++
Sbjct: 198 DYVNQPLEMSPDYWEGNVESVKAC-SDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKH 256
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPL 325
P +++ + ++ S GS +S+ G+LY WG+ N ++PK +
Sbjct: 257 PLQIESLSKQQIIQ----FSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEV 312
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L + + G H + ++ SWG G+LG KSS PKK+ E
Sbjct: 313 QALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSD-PKKISFFEDK 371
Query: 385 HVISVACGYGHSLVIV 400
+ +ACG HSLV++
Sbjct: 372 SIKQIACGSKHSLVLL 387
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 156/370 (42%), Gaps = 62/370 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVE-GRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P ++ L I ++ G + H A E + Y WG E G+LG+ + P I +
Sbjct: 82 PVKVTELSNKKINNISTG--TNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFN 139
Query: 106 ELSK-----YKIKKAGAGRSHTVVVTEDGNS---------LAFGWNKHGQLG-----SGS 146
L + ++I + G +HTV V + N +G + QLG +
Sbjct: 140 GLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDY 199
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ +E SP + + AC +DFT+ + + I + G + +LG+
Sbjct: 200 VNQPLEMSPDYWEGNVESVKAC-SDFTIAID--KQGRIFSWGKGGFNRLGY--------- 247
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
K Q P I +L+ + I++ + G+ H+ A+ + G +YTWG G+LGH +
Sbjct: 248 ----KAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQA 303
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------------KLKN 314
K + P+ V Q ++ ++ G ++ + +L+ WG LK+
Sbjct: 304 KADIFPKEVQALQNTYIVS----VACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKS 359
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGY--GPYGQKS 371
+ PK + +++ + G+ H V D + SWG QYG+LG+ Q +
Sbjct: 360 SD-----PKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNT 414
Query: 372 SAMPKKVDIL 381
A + VD++
Sbjct: 415 IASSQNVDLI 424
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 127/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++V+ DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYAWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P V V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++ + + G VY WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHVMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P V + ++ A +HT
Sbjct: 276 PAHVMVEKERVVEIAACHSAHT 297
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 165/409 (40%), Gaps = 62/409 (15%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG + +L P L P + G ++R++ C H AV +G YTWG N+ GQL
Sbjct: 110 RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 168
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKH-GQL 142
G G + P V L +K G T V E S + W ++ G
Sbjct: 169 GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSD 228
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ P+ V + +CGA + LS E + G +YGQLG G +E
Sbjct: 229 YPRLFWGALAPNTV------IRQVSCGAVHVMALS--EDGLLQAWGYNEYGQLGRGCTSE 280
Query: 203 YNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ + V AY P + IV+V+CG HT A+ G VYTWG G G+
Sbjct: 281 -GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYHTAAISENGEVYTWGLGSMGQ 333
Query: 261 LGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
LGH + E +PRRV R + +S G V+S G LY WG
Sbjct: 334 LGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHSCAVTEDGALYAWGGGHVGQL 389
Query: 311 ---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYG 360
NG D + + + ++ + G+ H V DS WG+ YG
Sbjct: 390 GLGPQSGFFSCALNGSDMLLRNIPVLIIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYG 449
Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
+ +KS+ P VD G V +A G GHS V+ D ++ E
Sbjct: 450 QAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAVLTDACSLKE 493
>gi|308799813|ref|XP_003074688.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116000858|emb|CAL50538.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 604
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 203/487 (41%), Gaps = 102/487 (20%)
Query: 61 VAAGCVSCHCVAVDVEG-----RCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYK- 111
V+ G CV D EG T+GR GQLG G P V EL++
Sbjct: 142 VSLGQFHTACVVTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFVRMGDELARGHD 201
Query: 112 --------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLV-- 160
+ G SH V ++ DG +++G G+LG +G+ E+ P R V
Sbjct: 202 SDDEHFEGVDSIALGGSHCVALSRDGGVISWGLASSGELGYTGNTPIEVN-VPRRVFVGI 260
Query: 161 ---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
+++T G++ T+ + E + G ++GQLGHGT + A
Sbjct: 261 DICTKITQVTTGSNHTMAID--EFGRLFACGRGRHGQLGHGTFRD-------------AA 305
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-------DEW 270
P R + AL G +V CG +H+V + S G V+ WG YG+LG + +
Sbjct: 306 PFSR-VEALKGMHVVSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGDLTFAAAAGWNNG 364
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-----DDWMYPKPL 325
VP V N++ P A +SAG +S GG++++ G+ K+ + ++ P
Sbjct: 365 VPWPCLVESLNDMDEPVASVSAGGAHSIFVTAGGRMFVCGRGKHGALGVGKNPFLTIGPP 424
Query: 326 MDLSGWNLRCMDSGNMHHFV----------------------------GADSSC------ 351
G N ++ N+HHFV GA SC
Sbjct: 425 TSACG-NRLTPEAVNIHHFVRRADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACG 483
Query: 352 --ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
+ G YG+LG+G +KS+ + +V+ L G VI+VA G+ H+ +V+ T+ L
Sbjct: 484 GVFTTGENSYGQLGHGD--KKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSL 541
Query: 410 ------DQLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEE 463
D + G S + + V P + +++ K++ DS+EE E +
Sbjct: 542 YTWGRGDWGQLGTGNMRSYTTPQEVKGFNVAPPRPESEI----LMYKQNLDSAEESENGD 597
Query: 464 NSDYESD 470
SD ES+
Sbjct: 598 -SDSESE 603
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 39/296 (13%)
Query: 51 RPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
R VG+DI + S H +A+D GR + GR GQLGHG + V L
Sbjct: 255 RVFVGIDICTKITQVTTGSNHTMAIDEFGRLFACGRGRHGQLGHGTFRDAAPFSRVEALK 314
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-------NEIEPSPVRCLVS 161
+ A G SH+V +T DGN A+G ++GQLG G + N P P CLV
Sbjct: 315 GMHVVSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWP--CLVE 372
Query: 162 E-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----TKDSSV 210
V + + G ++++++ G + G ++G LG G + T
Sbjct: 373 SLNDMDEPVASVSAGGAHSIFVTA--GGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGN 430
Query: 211 KLAYEA---------------QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
+L EA Q R + + + A G H+ + + G V+T G
Sbjct: 431 RLTPEAVNIHHFVRRADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGE 490
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
YG+LGH ++K +V RV+ + V+ + + T G LY WG+
Sbjct: 491 NSYGQLGHGDKKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGR 546
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
V R G++D N V P V + AAG + H + G +T G N GQLGH
Sbjct: 443 VRRADGSVDQNRVQQCSCGPRCRVAV--AAAG--ATHSCCLTACGGVFTTGENSYGQLGH 498
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE--DGNSLAFGWNK--HGQLGSGSIR 148
GDK T V L ++ +G +HT + E DG++ + W + GQLG+G++R
Sbjct: 499 GDKKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGRGDWGQLGTGNMR 558
Query: 149 NEIEPSPVR 157
+ P V+
Sbjct: 559 SYTTPQEVK 567
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 18/246 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV-SELSKYKIKKAGAGRSHTVVVTE 127
H +AV G Y+WG N QLG+G Q PT++ + L KI + G H++ +++
Sbjct: 86 HVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
+G A+G N GQ+GSGS N+ P V ++ A + T ++ +E +
Sbjct: 146 EGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGW 205
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG G N N QP P + L G I ++ CG HT+A+ +
Sbjct: 206 GYNGNGQLGLG--NNVN------------QPNPCRVQQLQGVIISQLVCGYAHTLALSDE 251
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G +++WG YG+LG + ++ P +V + N E S + S+ + G+++
Sbjct: 252 GSLFSWGANSYGQLGTGNKANQVSPSKVPM---NGERMVEIAASHYAHISAAMSETGKVF 308
Query: 308 MWGKLK 313
MWG+ +
Sbjct: 309 MWGQCR 314
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 111 KIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
KIKK G+ + + +T D A G N LG G + EP V L ++
Sbjct: 20 KIKKICVFGSSGNEAIYITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCKKKIVDI 79
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AA 225
A G+ V L+ + + + G Y QLG+G + T P I
Sbjct: 80 AFGSGPHV-LAVSKNGEMYSWGHNGYCQLGNGGSGQGLT--------------PTLINTN 124
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L G+ I++VACG++H++A+ +G ++ WG G++G ++ PR+V N +
Sbjct: 125 LQGKKILRVACGSHHSMALSQEGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKM-- 182
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSG 339
I+ G +S G++Y WG N G++ P P + L G + + G
Sbjct: 183 -ALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCG 241
Query: 340 NMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG-YGH 395
H +D S SWG YG+LG G + S P KV + G ++ +A Y H
Sbjct: 242 YAHTLALSDEGSLFSWGANSYGQLGTGNKANQVS--PSKVP-MNGERMVEIAASHYAH 296
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 45 VSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP-T 102
++PT + L G I VA G S H +A+ EG + WG+N GQ+G G + P
Sbjct: 116 LTPTLINTNLQGKKILRVACG--SHHSMALSQEGEIFAWGQNNCGQVGSGSTTNQPTPRK 173
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+V+ + G++ ++ + E+G +G+N +GQLG G+ N+ P V+ L
Sbjct: 174 VVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGV 233
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ + CG T+ LS EG S+ + G YGQLG G N+ N Q P
Sbjct: 234 IISQLVCGYAHTLALSD-EG-SLFSWGANSYGQLGTG--NKAN------------QVSPS 277
Query: 222 AIAALAGETIVKVACG--TNHTVAVDSKGYVYTWG 254
+ + GE +V++A + + A+ G V+ WG
Sbjct: 278 KV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 162/398 (40%), Gaps = 57/398 (14%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
DAV R + +++ P L + +D+ V G H V G +TWG G+L
Sbjct: 69 DAVIR--STVRHDVLLPKPLESKLVLDVYHVDCGVK--HAALVTKNGEVFTWGEESGGRL 124
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
GHG + P++V L+ + G HT VT G +G H G LG G+
Sbjct: 125 GHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDL 184
Query: 149 NEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ P + + +V +CG T ++S + G +G LGHG
Sbjct: 185 SHWIPKRISGALEGQQVAYVSCGTWHTALITST--GQLFTFGDGTFGVLGHGN------- 235
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
E+ P PR + +L+G + VACG HT AV S G ++TWG
Sbjct: 236 -------RESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGD 288
Query: 256 GGYGRLGHREQ----KDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--- 307
G RLGH ++ K V +D F R I+ G + GQ++
Sbjct: 289 GDKHRLGHGDKEPRVKPTCVASLIDYDFHR---------IACGHSLTVGLTTSGQVWGMG 339
Query: 308 --MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGY 364
++G+L N D P + D+ G N+ + G+ H + S +WG G LG+
Sbjct: 340 NTVYGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGH 399
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
G + +P V++L V +ACG + I R
Sbjct: 400 GDIEDRK--IPTLVEVLRDRGVRHIACGANFTAAICQR 435
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 155/357 (43%), Gaps = 58/357 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VA G + +A+ +G + G N GQLG+G R P V LS+ AG
Sbjct: 122 VRAVAGGYQ--YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG 179
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------- 169
SH + + DG A+G N +GQLG+GS + P V L V A A G
Sbjct: 180 --SHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGL-QGVVAVAGGYMHSLALC 236
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TVW G YGQLG+GT P P + L
Sbjct: 237 ADGTVWAW----------GFNDYGQLGNGTTVH--------------SPTPVPVPGL--S 270
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V VA G H++A+ + G V+ WG G+G+LG P RV+ +
Sbjct: 271 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE------VVA 324
Query: 290 ISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++ G +S GG L+ WG +L N P P+ L + + +G MH
Sbjct: 325 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGA--VTSVAAGGMHS 382
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V AD + +WG + G+LG+ ++ A P +V L+G ++VA G+ HSL +
Sbjct: 383 VAVQADGTVWAWGRNEEGQLGHERAPER--ATPVRVPGLQGE--VAVAAGFYHSLSV 435
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 148/381 (38%), Gaps = 78/381 (20%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRF 60
A+ ++ V G + L T W G L +G + + RP+ G+ R
Sbjct: 114 AQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS-RA 172
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA H +A+ +G + WG N GQLG+G R P V L + G
Sbjct: 173 VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYM 230
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADF 172
H++ + DG A+G+N +GQLG+G+ + P PV L S+V + A G AD
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL-SQVVSVAAGGFHSLALCADG 289
Query: 173 TVW----------------------------------------LSSVEGASILNAGLPQY 192
TVW L+ G S+ + G
Sbjct: 290 TVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYS 349
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG+G+ + + RP + L + VA G H+VAV + G V+
Sbjct: 350 GQLGNGS--------------FSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWA 393
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WG G+LGH + P RV Q E ++AG +S GG L+ WG L
Sbjct: 394 WGRNEEGQLGHERAPERATPVRVPGLQG------EVAVAAGFYHSLSVQAGGSLWAWG-L 446
Query: 313 KNNGDDWMYPKPLMDL--SGW 331
+ G PLM + GW
Sbjct: 447 NDFGQLGDSEAPLMPVPAPGW 467
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G L CGS +GR+ + DG SP + G + +A G H +A+D G+
Sbjct: 53 NGHLYTCGSNEVGQLGRQTNSADGT--SPVLVDTFKGCTLSTIACGLQ--HSMALDEWGQ 108
Query: 79 CYTWGRNERGQLGH--GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
++WG + GQLG G Q D+P I+ L+ + + G HTVV+T +G+ A+G
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQ-DKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGA 167
Query: 137 NKHGQLGSGSIRN-EIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N +GQ G G+ N E P + ++ + ACG++ T LS + ++ G +GQ
Sbjct: 168 NSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALS--QSGAVFGWGKNSHGQ 225
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG +D E++ P + L + ++CG + T + G V+T G
Sbjct: 226 LG--------LQDR------ESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCG 271
Query: 255 FGGYGRLGHREQKDEWVPRRV 275
G YG+ GH KDE VPR+V
Sbjct: 272 AGEYGQTGHGNTKDELVPRKV 292
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 163/356 (45%), Gaps = 65/356 (18%)
Query: 80 YTWGRNERGQL-----GHGDKIQRDRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGN 130
+ WG +L G+ D + + PT LSK+K I++ AG HT+ ++ +G+
Sbjct: 2 FCWGNATHHELCIECPGNLDLVIK--PT----LSKWKESSHIQQISAGEFHTLYLSNNGH 55
Query: 131 SLAFGWNKHGQLGSGSIRNEIE-PSPVR------CLVSEVTATACGADFTVWLSSVEGAS 183
G N+ GQLG + N + SPV C +S + ACG ++ L E
Sbjct: 56 LYTCGSNEVGQLGRQT--NSADGTSPVLVDTFKGCTLSTI---ACGLQHSMALD--EWGQ 108
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G GQLG L AQ +P+ I LA + +++VACG+ HTV
Sbjct: 109 PFSWGSDSMGQLGSN-------------LGSHAQDKPKIIKTLATKNVIQVACGSYHTVV 155
Query: 244 VDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCT 300
+ + G +Y WG YG+ LG+R K E P+ + +++L P A+I+ GS ++
Sbjct: 156 LTNNGDLYAWGANSYGQCGLGNRSNK-ETTPQAL-----SSILGIPIALIACGSNHTFAL 209
Query: 301 AGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCIS 353
+ G ++ WGK + + + YP L L + + G + F+ D +
Sbjct: 210 SQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFT 269
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
G +YG+ G+G K +P+KV L G V VACG H L VGER+
Sbjct: 270 CGAGEYGQTGHG--NTKDELVPRKVMELMGSTVTQVACGRRHML-----CRVGERI 318
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P L ++G+ I +A G S H A+ G + WG+N GQLG D+ R PT +
Sbjct: 184 TPQALSSILGIPIALIACG--SNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLK 241
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G T +T DG G ++GQ G G+ ++E+ P V L+ S VT
Sbjct: 242 TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVT 301
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
ACG L V G IL G GQLG
Sbjct: 302 QVACGRRHM--LCRV-GERILACGYGARGQLG 330
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 30/285 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G+ +TWG + G+LGHGD + P ++ L+ I A G H+ V +
Sbjct: 225 HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +G +G+LG G P V + E + CG + TV LS+ +G ++ + G
Sbjct: 285 GHLYMWGEGDYGRLGLGDALQRSVPVQVPD-IREASQVVCGFNHTVVLST-DGRTVWSFG 342
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG N Q RP+ I AL G TI ++A GT + AV +G
Sbjct: 343 AAENGKLGHGDTNR--------------QFRPKIIDALQGLTITQIAAGTQISAAVTREG 388
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+Y WGFG LG+ + + +P+ V V+ I+ G + G ++
Sbjct: 389 ALYVWGFGPC--LGNGSSDETFMLPKVVRGLSGRVVID----IAVGENHVVALTKDGLVF 442
Query: 308 MWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
WG +N + P+ + L G ++ + +G H FV
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 156/393 (39%), Gaps = 91/393 (23%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N QL D D+ LS Y K+ AG+ T V +G +A G
Sbjct: 132 FCWGSNSSQQLT--DATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVLSNGTVMANGKGS 189
Query: 139 HGQLGSGSIRNE-----IE-PSPVRCLV----SEVTATACGADFTVWLSSVEGASILNAG 188
+G+LG+G+ + IE P+PVR ++ S+ + A G + +W G
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIW----------TWG 239
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YG+LGHG DS+ Q P+ I ALA IV CG H+ AV G
Sbjct: 240 DGDYGKLGHG--------DSTT------QKSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRV-DV---------FQRNNVLP------------- 285
++Y WG G YGRLG + VP +V D+ F VL
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAE 345
Query: 286 --------------PEAV----------ISAGSVNSSCTAGGGQLYMWGK---LKNNGDD 318
P+ + I+AG+ S+ G LY+WG L N D
Sbjct: 346 NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSD 405
Query: 319 --WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+M PK + LSG + + G H + D +WG+ Q G+ G G G + P
Sbjct: 406 ETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-GMATYTSP 464
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
+ V L G + V G H+ V R E+
Sbjct: 465 QMVQGLHGAGIQQVTAGTTHTFVCFWRNTSREK 497
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V A C H AV G Y WG + G+LG GD +QR P V ++ + + G
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGF 325
Query: 120 SHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
+HTVV++ DG ++ +FG ++G+LG G + P + L +T A G + ++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVT 385
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
EGA + P LG+G+ +E P+ + L+G ++ +A G
Sbjct: 386 R-EGALYVWGFGP---CLGNGSSDETFM-------------LPKVVRGLSGRVVIDIAVG 428
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG 262
NH VA+ G V+TWG G+ G
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCG 453
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
+I+ V C H +A+ ++WG+N+ GQLG G + ++ + P ++ L +
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ V CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
+ CG HT A V S G +Y++G GG G+LG + P V + N LP + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354
Query: 291 SAGSVNSSCT----AGGGQ---LYMWGKLKNNGDDWMYPKPL 325
A S C +GG Q Y + + DD+ YP L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG GQLG + R P + LS+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
H++ +++ ++G NK+GQLG G + + P ++ L+ A ++ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ GA I G ++GQLG DN+ P + +L + +V + CG
Sbjct: 207 LSGA-IFGWGRNKFGQLGLNDDNDRYV--------------PTLLKSLRTQKVVHICCGE 251
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 136/326 (41%), Gaps = 33/326 (10%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R RP V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G +YGQLG G + Y+ Q P I +L G ++A G H
Sbjct: 155 GSEVFSWGQNKYGQLGLGYE-------------YKKQNSPHVIKSLLGIPFAQIAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
+ + G ++ WG +G+LG + D +VP + + V+ A+ G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG 261
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
V + G GQL N+ + P+ + +L G + + G H FV +
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRI 316
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +I+ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
GQLG R P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT+ E PR I +L+ IV+VACG H++A+ V++WG
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG E K + P + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V + CG H+ V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D R PT++
Sbjct: 180 SPHVIKSLLGIPFAQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
CG T G I + GL GQLG GT
Sbjct: 298 QITCGRQHTTAFVPSSG-RIYSFGLGGNGQLGTGT 331
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I EI P + L + CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +A+ RP + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY WG G+LG ++ VPR + ++ ++ G +S + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159
Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ K G + Y P + L G + +G H FV S I WG ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +P + L V+ + CG H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 159/381 (41%), Gaps = 51/381 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ +A G H V +G +TWG G+LGHG RP
Sbjct: 254 DVLTPKSLESNVVLDVHQIACGVR--HVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ + G HT V+ G+ +G H G LG G+ + P P+
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPL 371
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ ++ + G +G LGHG
Sbjct: 372 EGL--QVLSVACG----TWHSALATSNGKLFTFGDGTFGVLGHGD--------------R 411
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
E+ P PR + L+G +KVACG HT A+ S ++TWG G RLGH
Sbjct: 412 ESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHG 471
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
++ +P V N + ++ + T G M +G+L N D
Sbjct: 472 SKETYLLPTCVSALIDYNF---HQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGR 528
Query: 321 YPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D L G + + G H + + S +WG G LG+G + S P V
Sbjct: 529 LPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRS--PTFV 586
Query: 379 DILEGMHVISVACGYGHSLVI 399
+ L+ +V S++CG + I
Sbjct: 587 EALKDRNVKSISCGSNFTASI 607
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 42 GNLVSPTRLRPLVGVDI--RFVA-AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN +S RL LV + FV C + H + +TWGR G+LGHGD R
Sbjct: 521 GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDR 580
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVV 125
PT V L +K G + T +
Sbjct: 581 RSPTFVEALKDRNVKSISCGSNFTASI 607
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ E Y+WG+N+ GQLG G +K + P + LS
Sbjct: 136 DIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG H+ +T G +G NK GQLG + +P+ ++ L S+ + CG D T
Sbjct: 196 AAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ G AG YGQLGH + + + PR + L G + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSASH--------------EVNPRKVFELMGNIVTQI 299
Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
ACG HT+A V S G +Y++G GG G+LG
Sbjct: 300 ACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAG 118
VA C H +A++ +G+ ++WG GQ+G R P + LS +I + G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
H++ ++++ N ++G N++GQLG GS R E P ++ L A +
Sbjct: 146 HHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFAL 205
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
++ GA I G ++GQLG ++E + D P + +L + I+ + CG
Sbjct: 206 TISGA-IFGWGRNKFGQLG--LNDETDRSD------------PALLKSLRSQKIIYICCG 250
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA--------V 289
+HT A+ +G V+T+G GGYG+LGH E PR+V N V V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFV 310
Query: 290 ISAGSVNSSCTAGGGQL 306
S+G + S G GQL
Sbjct: 311 PSSGRIYSFGLGGNGQL 327
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P ++ G G HT V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R + P V L +++ A +CG T+ L+ + + + G +GQ+G
Sbjct: 64 GQLGHDKSRKK--PEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAAHGQIG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
V +A + PR I +L+ IV+VACG +H++A+ + +Y+WG Y
Sbjct: 118 -----------VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E++ E PR + P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
N+ D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+L V
Sbjct: 283 VN--PRKVFELMGNIVTQIACGRQHTLAFV 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 33/339 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
++ P R + ++R V GC + H V +G YT G N+ GQLGH DK R +P
Sbjct: 22 VIEPRRCDFFINKNVRDV--GCGNRHTGFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
V L I G +HT+ + + G ++G HGQ+G + I P ++ L
Sbjct: 78 VGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI 137
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG ++ LS + ++I + G QYGQLG G++ K+S+ PR
Sbjct: 138 QIVQVACGHHHSLALS--KESNIYSWGQNQYGQLGLGSEKR---KESA----------PR 182
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L+G +A G H+ A+ G ++ WG +G+LG ++ D P + +
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQ 242
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLSGWNLRC 335
++ I G +++ G ++ +G+L N+ + P+ + +L G +
Sbjct: 243 KII----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQ 298
Query: 336 MDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSS 372
+ G H FV + S+G G+LG G K S
Sbjct: 299 IACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKS 337
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I E+ P RC + V CG T ++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH D S K +P + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGH---------DKSRK-------KPEQVGALDAQIIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V++WG +G++G +D VPR + ++ ++ G +S + +Y
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ----VACGHHHSLALSKESNIY 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ L + P+ + LSG + +G H F S I WG ++
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +S P + L +I + CG H+
Sbjct: 220 GQLGLNDETDRSD--PALLKSLRSQKIIYICCGEDHT 254
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PALLKSLRSQKIIYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT+ V G +FG +GQLG GS N+ PS V+
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V + ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V+S G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
+I+ V C H +A+ ++WG+N+ GQLG G + ++ + P ++ L +
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ V CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
+ CG HT A V S G +Y++G GG G+LG + P V + N LP + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354
Query: 291 SAGSVNSSCT----AGGGQ---LYMWGKLKNNGDDWMYPKPL 325
A S C +GG Q Y + + DD+ YP L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG GQLG + R P + LS+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
H++ +++ ++G NK+GQLG G + + P ++ L+ A ++ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ GA I G ++GQLG DN+ P + +L + +V + CG
Sbjct: 207 LSGA-IFGWGRNKFGQLGLNDDNDRYV--------------PTLLKSLRTQKVVHICCGE 251
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 136/326 (41%), Gaps = 33/326 (10%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R RP V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G +YGQLG G + Y+ Q P I +L G ++A G H
Sbjct: 155 GSEVFSWGQNKYGQLGLGYE-------------YKKQNSPHVIKSLLGIPFAQIAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
+ + G ++ WG +G+LG + D +VP + + V+ A+ G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG 261
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
V + G GQL N+ + P+ + +L G + + G H FV +
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRI 316
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +I+ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
GQLG R P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT+ E PR I +L+ IV+VACG H++A+ V++WG
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG E K + P + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V + CG H+ V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D R PT++
Sbjct: 180 SPHVIKSLLGIPFAQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
CG T G I + GL GQLG GT
Sbjct: 298 QITCGRQHTTAFVPSSG-RIYSFGLGGNGQLGTGT 331
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I EI P + L + CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +A+ RP + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY WG G+LG ++ VPR + ++ ++ G +S + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159
Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ K G + Y P + L G + +G H FV S I WG ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +P + L V+ + CG H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 157/381 (41%), Gaps = 53/381 (13%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GA++ + P L + +D+++VA C H V +G +TWG G+LGHG
Sbjct: 291 GAMNLDAPLPKALESAIVLDVQYVA--CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD 348
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSP 155
P +V L+ + G H VT G+ +G H G LG G+ + P
Sbjct: 349 VSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408
Query: 156 VRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V + E V + ACG T +++ + G +G LGH N + S A
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVVTTA--GQLFTFGDGTFGVLGH------NDRQS----A 456
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
Y PR + +L G V+ ACG HT AV S G ++TWG G GRL
Sbjct: 457 YS----PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNNGD 317
GH +++ VP V +N V S+ + T G M+G+L +
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNF---RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQA 569
Query: 318 DWMYPKP----LMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKS 371
D P L+D ++ C HH V S +WG G LG+G Q+
Sbjct: 570 DGKLPGMVEGRLVDAYVEDIAC----GAHHVACVTLKSEVYTWGKGANGRLGHG--DQED 623
Query: 372 SAMPKKVDILEGMHVISVACG 392
P V+ L+ V S+ACG
Sbjct: 624 RNTPTLVEALKEKQVKSIACG 644
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 37/215 (17%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHG 93
SP + L G +R V A C H AV G+ +TWG ++G+LGHG
Sbjct: 458 SPREVESLKG--LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHG 515
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRN 149
DK QR PT V+ L + +K G S TV +T G G + GQLG G +
Sbjct: 516 DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPG 575
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+E V V ++ ACGA ++ + + G G+LGHG + NT
Sbjct: 576 MVEGRLVDAYVEDI---ACGAHHVACVTL--KSEVYTWGKGANGRLGHGDQEDRNT---- 626
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + +ACG T AV
Sbjct: 627 ----------PTLVEALKEKQVKSIACGATFTAAV 651
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P P+A+ + + VACG H V +G V+TWG GRLGH D P+ V+
Sbjct: 298 PLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEA 357
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPK----P 324
+ V++ G + G LY WG L +G+D W+ PK P
Sbjct: 358 LASSTT----EVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWI-PKRVNGP 412
Query: 325 LMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L ++ ++ C G H V ++G +G LG+ ++S+ P++V+ L+G
Sbjct: 413 LEEVRVASIAC---GPWHTAVVTTAGQLFTFGDGTFGVLGHN--DRQSAYSPREVESLKG 467
Query: 384 MHVISVACGYGHSLVIVD 401
+ + ACG H+ +V+
Sbjct: 468 LRTVRAACGVWHTAAVVE 485
>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
Length = 1867
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 165/400 (41%), Gaps = 64/400 (16%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
E G++ G C D + + DG + T V +DI C H V +
Sbjct: 1055 ESLGDVYVWGEVCSDGISQ-----DGTVNCRT-----VKIDI-----ACGVRHIALVTRQ 1099
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G +TWG G+LGHG ++ RP +V L+ I G HT V+ G+ +G
Sbjct: 1100 GEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGD 1159
Query: 137 NKH--GQLGSGSIRNEIEPS----PVRCLVSEVTATACGADFTVWLSSVEGAS--ILNAG 188
H G LG GS + P PV L +V + ACG W S++ A+ + G
Sbjct: 1160 GIHNVGLLGHGSDLSHWIPKRVSGPVEGL--QVLSVACGT----WHSALATANGKLFTFG 1213
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV---- 244
+G LGHG E+ P+ + L+G +KVACG HTVA+
Sbjct: 1214 DGAFGVLGHGD--------------RESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVM 1259
Query: 245 ------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
S ++TWG G RLGH ++ +P V N + + ++ +
Sbjct: 1260 NQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF---QQIACGHTLTVA 1316
Query: 299 CTAGGGQLYM----WGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCI 352
T G M G+L ++ D P + D L G + + G+ H + + S
Sbjct: 1317 LTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 1376
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+WG G LG+G ++ P V+ L+ HV S++C
Sbjct: 1377 TWGKGSNGRLGHG--DKEDRKTPTLVEALKERHVKSISCA 1414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ +ACG H V +G V+TWG GRLGH Q D P+ V+ N+ ++
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNI----DFVA 1139
Query: 292 AGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSGWNLRCMDSGNMH 342
G ++ + G L+ WG L +G D W+ + + G + + G H
Sbjct: 1140 CGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWH 1199
Query: 343 H-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
A+ ++G +G LG+G ++S + PK+V +L G+ + VACG H++ IV+
Sbjct: 1200 SALATANGKLFTFGDGAFGVLGHG--DRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVE 1257
Query: 402 RTN 404
N
Sbjct: 1258 VMN 1260
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R RP V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVGALDAQNIVTVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G+ GQLG SG+ P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G +YGQLG G + Y+ Q P+ I +L G ++A G H
Sbjct: 155 GSEVFSWGQNKYGQLGLGYE-------------YKKQASPQIIKSLLGIPFAQIAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G V+ WG +G+LG ++ D +VP + + ++ IS G +++
Sbjct: 202 SFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YISCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S P K
Sbjct: 318 SFGLGGNGQLGMGTTSNRKSPFPVK 342
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
V C H +A++ +G+ Y WG GQLG + R P + LS +I + G
Sbjct: 87 VTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
H++ +++ ++G NK+GQLG G + + P ++ L+ A ++ +
Sbjct: 147 FHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLT 206
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ GA + G ++GQLG +N+ P + +L + IV ++CG
Sbjct: 207 LSGA-VFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYISCGE 251
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL--------PPEAVI 290
+HT A+ +G V+T+G GGYG+LGH E PR+V N V V
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVP 311
Query: 291 SAGSVNSSCTAGGGQLYM 308
S G + S G GQL M
Sbjct: 312 STGRIYSFGLGGNGQLGM 329
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 143/333 (42%), Gaps = 34/333 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P S K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R P V L ++ + +CG T+ L+ + + G GQLG
Sbjct: 64 GQLGHEKSRKR--PEQVGALDAQNIVTVSCGEAHTLALN--DKGQVYAWGFAVDGQLGLS 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY PR I +L+ IV+VACG H++A+ V++WG Y
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGYEYKKQASPQII----KSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
+ P+KV L G V +ACG H+ V T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I EI P RC + +V CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +++ RP + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY WGF G+LG ++ VPR + ++ ++ G +S + G +++
Sbjct: 104 QVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQ----VACGYFHSLALSKGSEVF 159
Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
WG+ K G + Y P+ + L G + +G H FV S + WG ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG + +P + L ++ ++CG H+
Sbjct: 220 GQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQIIKSLLGIPFAQIAAG--GAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ + VT
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG GT
Sbjct: 298 QIACGRQHTSAFVPSTG-RIYSFGLGGNGQLGMGT 331
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 160/387 (41%), Gaps = 71/387 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D + +A G S H V V +G+ ++WG + G+LGHG +P ++
Sbjct: 289 PKALDRIAALDAQIIACG--SKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDA 346
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSEV- 163
LS+ + G HT VT GN +G + H G LG GS + P V + V
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVR 406
Query: 164 -TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ +CG T +SS + G +G LGHG D +K PR
Sbjct: 407 ISFVSCGPWHTAAVSS--QGKLFTFGDGTFGALGHG-DRSSTSK-------------PRE 450
Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
+ +L G +KV+CG HT AV G ++TWG G G+LGH +++
Sbjct: 451 VESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRL 510
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG--GQLYMW--------------GKLKN 314
VP V + P V +S A GQ+Y GKL
Sbjct: 511 VPSCVSM--------PAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPI 562
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSS 372
+ D D+ +++ + G+ HH V S+ +WG G+LG+G + +
Sbjct: 563 HTDG--------DIRNCHIKQIACGS-HHVVALSSNGDVYTWGKGINGQLGHGDIKDRHT 613
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVI 399
P V L+ V SV CG + VI
Sbjct: 614 --PTLVKALKHKQVKSVVCGSNFTAVI 638
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 18/220 (8%)
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N Y+ K S + + +A P+A+ +A +ACG+ H V V +G +++WG G+
Sbjct: 272 NMYDVKSSPI-MRMDAL-LPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGK 329
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---- 316
LGH D P+ +D +NV+ +++ G ++ G LY WG +N
Sbjct: 330 LGHGADADVSQPKVIDALSESNVV----LVACGEFHTCAVTVSGNLYTWGDDTHNTGYLG 385
Query: 317 -----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
W+ + + + + + G H V + ++G +G LG+G +
Sbjct: 386 HGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHG--DRS 443
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
S++ P++V+ L+G+ + V+CG H+ ++D N +RLD
Sbjct: 444 STSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLD 483
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 24/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L G ++ A G H +A+ EG+ Y+WG N+ +LG+ + PT++
Sbjct: 68 IYPKKIEALCGKSVKTFAYG-KGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLI 126
Query: 105 -SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--- 160
S L+ + G H++ +T G A+G N GQ+G G+I + ++P P +
Sbjct: 127 PSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLN 186
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V +CG +V + + + + G GQLG G +Q
Sbjct: 187 GKKVVHISCGDSSSV--AVTDNGEVYSWGHNGVGQLGIGNCT--------------SQAE 230
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ +A A I KV CG HT+A+ +G +Y WG YG+LG + W+P ++ V +
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPE 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+L + S S + G +++MWG+
Sbjct: 291 MGRIL--DIATSHYHHISLAMSEGNRIFMWGQ 320
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 124/326 (38%), Gaps = 78/326 (23%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G + T++VT+D G N +G LG+G + I P + L + T
Sbjct: 33 GKAANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHV 92
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKV 234
L+ E + + G Y +LG+ + NE T P I +AL E +V +
Sbjct: 93 LALTEEGKVYSWGYNDYCELGNRSTNEGLT--------------PTLIPSALNNEFVVDI 138
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
ACG +H++A+ +KG VY WG G++G + +P+ + + VL + V I
Sbjct: 139 ACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHI-----VLNGKKVVHI 193
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
S G +S G++Y
Sbjct: 194 SCGDSSSVAVTDNGEVY------------------------------------------- 210
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
SWGH G+LG G S A P+KV + + V CGY H+L + D +
Sbjct: 211 --SWGHNGVGQLGIG--NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGD------ 260
Query: 411 QLDVYDGKASSQDNEEIDRNSTVPPK 436
L V+ + Q D N +P K
Sbjct: 261 -LYVWGANSYGQLGLNTDSNVWIPTK 285
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
+I+ V C H +A+ ++WG+N+ GQLG G + ++ + P ++ L +
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ V CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
+ CG HT A V S G +Y++G GG G+LG + P V + N LP + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354
Query: 291 SAGSVNSSCT----AGGGQ---LYMWGKLKNNGDDWMYPKPL 325
A S C +GG Q Y + + DD+ YP L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG GQLG + R P + LS+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
H++ +++ ++G NK+GQLG G + + P ++ L+ A ++ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ GA I G ++GQLG DN+ P + +L + +V + CG
Sbjct: 207 LSGA-IFGWGRNKFGQLGLNDDNDRYV--------------PTLLKSLRTQKVVHICCGE 251
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 136/326 (41%), Gaps = 33/326 (10%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R RP V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G +YGQLG G + Y+ Q P I +L G ++A G H
Sbjct: 155 GSEVFSWGQNKYGQLGLGYE-------------YKKQNSPHVIKSLLGIPFAQIAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
+ + G ++ WG +G+LG + D +VP + + V+ A+ G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG 261
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
V + G GQL N+ + P+ + +L G + + G H FV +
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRI 316
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +I+ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
GQLG R P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT+ E PR I +L+ IV+VACG H++A+ V++WG
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG E K + P + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V + CG H+ V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D R PT++
Sbjct: 180 SPHVIKSLLGIPFAQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
CG T G I + GL GQLG GT
Sbjct: 298 QITCGRQHTTAFVPSSG-RIYSFGLGGNGQLGTGT 331
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I EI P + L + CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +A+ RP + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY WG G+LG ++ VPR + ++ ++ G +S + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159
Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ K G + Y P + L G + +G H FV S I WG ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +P + L V+ + CG H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 32/329 (9%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ ++V L + ++ G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG + E PS V+ L S A + +G + G +YGQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCG---- 124
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
E +KD + + P+ A T+ +VA G H+V + +GYV+TWG
Sbjct: 125 -EEPSKDETGRPVRRDIVIPKRCAPQL--TVRQVAAGGTHSVVLTREGYVWTWG------ 175
Query: 261 LGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
W P +++ + R L +I+ G+ ++ G L+ WG +
Sbjct: 176 -------QPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQL 228
Query: 314 NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
GD +P P+ L L + +G H + + WG ++G LG+G +
Sbjct: 229 GTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKS 288
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
S +P+KV++L G +I V+CG HS+ +
Sbjct: 289 SKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 40/277 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
+P+ ++ L V I V A HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 81 TPSLVKSLASVKI--VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
D + +++ AG +H+VV+T +G + W G I+ P V+
Sbjct: 139 DIVIPKRCAPQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISIPVRVQG 194
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
L V A GA L+ E ++ G +YGQLG G + QP
Sbjct: 195 L-ENVRLIAVGAFHN--LALKEDGTLWAWGNNEYGQLGTG----------------DTQP 235
Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
R P + L T+V +A G H+ A+ ++G VY WG G +GRLG ++ + +P++
Sbjct: 236 RSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
V++ +++ +S G +S G+++ +G+
Sbjct: 296 VNLLAGEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 161/378 (42%), Gaps = 60/378 (15%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKK 114
++R V G S + +A+ +G+ +TWG N+RG LGH + + + P++V L+ KI +
Sbjct: 38 FNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQ 95
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
A G H + V + G + A+G N++GQ G ++E PVR + V C TV
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAPQLTV 152
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAAL 226
+ AG GT + T++ V + P P + L
Sbjct: 153 --------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGL 195
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E + +A G H +A+ G ++ WG YG+LG + + P V ++
Sbjct: 196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVD- 252
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
I+AG +S+ G++Y WG+ + N+ M P+ + L+G ++ +
Sbjct: 253 ---IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSC 309
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMH---------- 385
G H + D S+G +G LGYG + +DI LEG
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGK 369
Query: 386 --VISVACGYGHSLVIVD 401
VACG H+L IV+
Sbjct: 370 WIAKHVACGGRHTLAIVE 387
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++V P R P + V R VAAG H V + EG +TWG+ GD Q P
Sbjct: 139 DIVIPKRCAPQLTV--RQVAAG--GTHSVVLTREGYVWTWGQ----PWPPGDIKQISIPV 190
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
V L ++ GA H + + EDG A+G N++GQLG+G + P PV+ L +
Sbjct: 191 RVQGLENVRLIAVGA--FHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDL 248
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ V A G T + E + G ++G+LG G DN D S K+ P
Sbjct: 249 TLVDIAAGGWHSTALTNEGE---VYGWGRGEHGRLGFG-DN-----DKSSKML------P 293
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+ + LAGE I++V+CG H+VA+ G ++++G G +GRLG+
Sbjct: 294 QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 123/298 (41%), Gaps = 51/298 (17%)
Query: 183 SILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY------------ 214
S++ G + GQLG GTD E +N + S LA
Sbjct: 6 SVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 215 -----------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+ + P + +LA IV+ A G H +AVD +G Y WG YG+ G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 264 REQKDEW-VPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
KDE P R D+ P V ++AG +S G ++ WG+ GD
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQ 185
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P+ N+R + G H+ + D + +WG+ +YG+LG G +S +P V
Sbjct: 186 ISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIP--VQ 243
Query: 380 ILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKK 437
L+ + ++ +A G HS + TN GE G+ DN D++S + P+K
Sbjct: 244 GLDDLTLVDIAAGGWHSTAL---TNEGEVYGWGRGEHGRLGFGDN---DKSSKMLPQK 295
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L ++R +A G + H +A+ +G + WG NE GQLG GD R P V
Sbjct: 189 PVRVQGLE--NVRLIAVG--AFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
L + AG H+ +T +G +G +HG+LG G +++ P V L E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ I + G +G+LG+G T ++L + P
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIDIPPLEGRF 359
Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
G+ I K VACG HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 157/380 (41%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ G H V +G Y+WG G+LGHG +P
Sbjct: 97 DCLVPKPLEFAVRLDVQNISCG--GRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPK 154
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ LS I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 155 LIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPL 214
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG E+
Sbjct: 215 EGIHVSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDR--------------ESIS 258
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 259 VPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 318
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+ + VP V V P ++ G + G +Y ++G+L N D M
Sbjct: 319 EAKLVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGML 374
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G K++ P V+
Sbjct: 375 PVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNT--PTLVE 432
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 433 ALKDKQVRSVVCGINFTAAI 452
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 101 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDA 158
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ L
Sbjct: 159 LSHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPL 214
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 215 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRESISVPREVESLKGLRTV 272
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 273 RAACGVWHTAAVVE 286
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 162/380 (42%), Gaps = 47/380 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+++ P L V +D++ +A G H +G + WG G+LGHG RP
Sbjct: 241 ADILIPKPLESDVVLDVQQIACGYR--HIALTTRQGEVFAWGEELGGRLGHGTDADISRP 298
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCL 159
+V L+ ++ G HT VT G+ + G+ G LG+G+ + P V
Sbjct: 299 KLVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGP 358
Query: 160 VS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ +V + +CG+ W S++ +S + G +G LGHG E
Sbjct: 359 LEGVQVLSVSCGS----WHSALTTSSGKVFTFGDGTFGALGHG--------------KRE 400
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYV---------YTWGFGGYGRLGHRE 265
P+ + AL+G +KVACG H+ A V+S +V YTWG G +LGH +
Sbjct: 401 TVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGD 460
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----GKLKNNGDDWMY 321
+ VP V + V S+ + + G M G+L N D
Sbjct: 461 KDSRLVPTCVQSLIDYSF---HQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQ 517
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P P+ D LSG + + G+ H + + S +WG G LG+G G + P V+
Sbjct: 518 PIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHG--GVEDKKKPTLVE 575
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S+ACG + I
Sbjct: 576 ALKDRHVKSIACGSNFTTCI 595
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACG H +G V+ WG GRLGH D P+ V+
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 305
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNG---DDWMYPKPLMDLSG 330
+NV I+ G ++ G LY WG L NG W+ + L G
Sbjct: 306 VSNV----EYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEG 361
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G +++ PK+V+ L G + V
Sbjct: 362 VQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHG--KRETVGYPKEVEALSGFRTMKV 419
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ +N
Sbjct: 420 ACGLWHSAAIVESSN 434
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 30/252 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H + G Y+WG N QLG+G Q P +++ L K+ K G H++ +T
Sbjct: 93 HVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTL 152
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CL-VSEVTATACGADFTVWLSSVEGASIL 185
+G A+G+N GQ+GSG+ N+ P V CL +VT ACG T ++ ++ +
Sbjct: 153 EGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQ--TSSMALLDNGEVY 210
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLG G N N QP P +AAL +V++ CG H +A+
Sbjct: 211 GWGYNGNGQLGVG--NNVN------------QPNPCRVAALQQMIVVQIVCGYAHAMALT 256
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN----SSCTA 301
+G VY WG YG+LG + + P ++ L + G+ + SS
Sbjct: 257 DEGSVYAWGANSYGQLGTGNKANLVTPTKI-------ALDKGRFVEIGATHYNHVSSAIT 309
Query: 302 GGGQLYMWGKLK 313
G++YMWG+ +
Sbjct: 310 QTGKVYMWGQCR 321
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG 129
+ + + Y G N LG GD P + L K KI G G H +V T++G
Sbjct: 42 IVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTDNG 101
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNA 187
+ ++G N + QLG+GS + P + + +V ACG+ ++ L ++EG +
Sbjct: 102 DLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL-TLEG-EVFAW 159
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
G GQ+G GT Q PR +AA G + ++ACG ++A+
Sbjct: 160 GYNNCGQVGSGTTTN--------------QATPRKVAACLGTRKVTEIACGQTSSMALLD 205
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G VY WG+ G G+LG ++ P RV Q+ V+ I G ++ G +
Sbjct: 206 NGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQ----IVCGYAHAMALTDEGSV 261
Query: 307 YMWG 310
Y WG
Sbjct: 262 YAWG 265
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 41/309 (13%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P +S + + + G+ + +V+T+D + A G N LG G ++ +EP + L
Sbjct: 22 PEFISSIKQACV--FGSSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILC 79
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ G+ V L + + + G Y QLG+G+ N+
Sbjct: 80 KKKIVDIGYGSGPHV-LVCTDNGDLYSWGHNGYSQLGNGSTNQ--------------GLS 124
Query: 220 PRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ I L G +VKVACG++H++A+ +G V+ WG+ G++G ++ PR+V
Sbjct: 125 PQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAA- 183
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP-----LMD 327
L V I+ G +S G++Y WG N G++ P P L
Sbjct: 184 ----CLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQ 239
Query: 328 LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ + C G H D S +WG YG+LG G + + P K+ + +G V
Sbjct: 240 MIVVQIVC---GYAHAMALTDEGSVYAWGANSYGQLGTG--NKANLVTPTKIALDKGRFV 294
Query: 387 ISVACGYGH 395
A Y H
Sbjct: 295 EIGATHYNH 303
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGA 117
+ V C S H +A+ +EG + WG N GQ+G G + P V+ L K+ +
Sbjct: 136 KVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIAC 195
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWL 176
G++ ++ + ++G +G+N +GQLG G+ N+ P V L + CG + L
Sbjct: 196 GQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMAL 255
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ EG S+ G YGQLG G T P IA G + A
Sbjct: 256 TD-EG-SVYAWGANSYGQLGTGNKANLVT--------------PTKIALDKGRFVEIGAT 299
Query: 237 GTNH-TVAVDSKGYVYTWG 254
NH + A+ G VY WG
Sbjct: 300 HYNHVSSAITQTGKVYMWG 318
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P ++ +G + C +A+ G Y WG N GQLG G+ + + P
Sbjct: 174 NQATPRKVAACLGTR-KVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPC 232
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
V+ L + + + G +H + +T++G+ A+G N +GQLG+G+ N + P+ +
Sbjct: 233 RVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKI 286
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTC-WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
A L K+ E G+ LL G W G + + N+ P R +
Sbjct: 183 ACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIV 242
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H +A+ EG Y WG N GQLG G+K PT ++ L K + + GA
Sbjct: 243 VQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIA-LDKGRFVEIGATHY 301
Query: 121 HTV--VVTEDGNSLAFG 135
+ V +T+ G +G
Sbjct: 302 NHVSSAITQTGKVYMWG 318
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G + + P +
Sbjct: 11 TLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + I+ A +HT
Sbjct: 276 PAHIMVEKERVIEIAACHSAHT 297
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 155/357 (43%), Gaps = 58/357 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VA G + +A+ +G + G N GQLG+G R P V LS+ AG
Sbjct: 125 VRAVAGGYQ--YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG 182
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------- 169
SH + + DG A+G N +GQLG+GS + P V L V A A G
Sbjct: 183 --SHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGL-QGVVAVAGGYMHSLALC 239
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TVW G YGQLG+GT P P + L
Sbjct: 240 ADGTVWAW----------GFNDYGQLGNGTTVH--------------SPTPVPVPGL--S 273
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V VA G H++A+ + G V+ WG G+G+LG P RV+ +
Sbjct: 274 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE------VVA 327
Query: 290 ISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++ G +S GG L+ WG +L N P P+ L + + +G MH
Sbjct: 328 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGA--VTSVAAGGMHS 385
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V AD + +WG + G+LG+ ++ A P +V L+G ++VA G+ HSL +
Sbjct: 386 VAVQADGTVWAWGRNEEGQLGHERAPER--ATPVRVPGLQGE--VAVAAGFYHSLSV 438
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 148/381 (38%), Gaps = 78/381 (20%)
Query: 2 AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRF 60
A+ ++ V G + L T W G L +G + + RP+ G+ R
Sbjct: 117 AQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS-RA 175
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA H +A+ +G + WG N GQLG+G R P V L + G
Sbjct: 176 VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYM 233
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADF 172
H++ + DG A+G+N +GQLG+G+ + P PV L S+V + A G AD
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL-SQVVSVAAGGFHSLALCADG 292
Query: 173 TVW----------------------------------------LSSVEGASILNAGLPQY 192
TVW L+ G S+ + G
Sbjct: 293 TVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYS 352
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG+G+ + + RP + L + VA G H+VAV + G V+
Sbjct: 353 GQLGNGS--------------FSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWA 396
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WG G+LGH + P RV Q E ++AG +S GG L+ WG L
Sbjct: 397 WGRNEEGQLGHERAPERATPVRVPGLQG------EVAVAAGFYHSLSVQAGGSLWAWG-L 449
Query: 313 KNNGDDWMYPKPLMDL--SGW 331
+ G PLM + GW
Sbjct: 450 NDFGQLGDSEAPLMPVPAPGW 470
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 157/375 (41%), Gaps = 53/375 (14%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G H V +G +TW G+LGHG ++ RP
Sbjct: 257 DVLIPKPLESNVVLDVHQIACGVR--HIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPK 314
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ I G HT V+ G+ +G H G LG GS + P PV
Sbjct: 315 LVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPV 374
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ A+ + G +G LGHG
Sbjct: 375 EGL--QVLSVACGT----WHSALATANGKLFTFGDGAFGVLGHGDR-------------- 414
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
E+ P+ + L+G +KVACG HTVA+ S ++TWG G RLGH
Sbjct: 415 ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHG 474
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
++ +P V N I+ G + G ++ G+L ++ D
Sbjct: 475 NKETYLLPTCVSSLIDYNF----NQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDG 530
Query: 320 MYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D L G + + G+ H + + S +WG G LG+G + + P
Sbjct: 531 KLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKT--PTL 588
Query: 378 VDILEGMHVISVACG 392
V+ L HV S++CG
Sbjct: 589 VEALRERHVKSISCG 603
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACG H V +G V+TW GRLGH Q D P+ V+
Sbjct: 261 PKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLA 320
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++ G ++ + G L+ WG L +G D W+ + + G
Sbjct: 321 LTNI----DFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG 376
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H A+ ++G +G LG+G ++S + PK+V +L G+ + V
Sbjct: 377 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--DRESVSYPKEVKMLSGLKTLKV 434
Query: 390 ACGYGHSLVIVDRTN 404
ACG H++ IV+ N
Sbjct: 435 ACGVWHTVAIVEVMN 449
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ +TWG ++ +LGHG+K PT VS L Y + G + TV +T G+ G
Sbjct: 459 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGT 518
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
HGQLGS + ++ CLV + V +CG L+S + + G
Sbjct: 519 SHGQLGSSNSDGKLP-----CLVQDRLVGEFVEEISCGDHHVAVLTS--RSEVFTWGKGS 571
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G+LGHG ++ T P + AL + ++CG+N T ++
Sbjct: 572 NGRLGHGDKDDRKT--------------PTLVEALRERHVKSISCGSNFTSSI 610
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H + +TWG+ G+LGHGDK R PT+V L + +K G + T
Sbjct: 548 ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFT 607
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G + + P +
Sbjct: 11 TLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + I+ A +HT
Sbjct: 276 PAHIMVEKERVIEIAACHSAHT 297
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +R L V + +AAG H VA+ +TWGR GQLGHGD P +V
Sbjct: 82 PRWIRALETVKVVQIAAG--EDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKG 139
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVS 161
L IK G G +T +T G L FG G+LG+G + N P ++ L
Sbjct: 140 LQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAK 199
Query: 162 EVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A G +F+++LS + + G GQLG + + S+ L Y +
Sbjct: 200 FTIIQATGGKNFSMFLSHT--GQLYSVGYAANGQLGIPFE-----EVESLNLPYTGTMQE 252
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ G + V+CG +H++A+ G VY+WG G LGH +D + P+ V + +
Sbjct: 253 ---VSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEA 309
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ P +SAG +S+ + G++Y WG+
Sbjct: 310 D----PCVSVSAGGYHSAAVSATGRIYTWGR 336
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 43/341 (12%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y+ G G+LG D+ R T + L ++K G H ++++ G ++G+N
Sbjct: 7 YSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYND 66
Query: 139 HGQLGSG-SIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
Q G G ++ EP +R L +V A G D +V L+ + + + G +GQLG
Sbjct: 67 SRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALT--DRSEVFTWGRGLHGQLG 124
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG ++ P + L G+ I + CG +T A+ G V +G
Sbjct: 125 HGDVSDV--------------WFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSA 170
Query: 257 GYGRLGHREQK-----DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
G+LG+ + + ++P ++ + ++ + G S + GQLY G
Sbjct: 171 ASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQA----TGGKNFSMFLSHTGQLYSVGY 226
Query: 312 LKN----------NGDDWMYPKPLMDLS--GWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
N + Y + ++S G ++ + G+ H + D SWG
Sbjct: 227 AANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGI 286
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG+G G + + PK V +LE +SV+ G HS +
Sbjct: 287 NWALGHG--GTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV +++V+ C H +A+ +G Y+WG LGHG P +V+ L
Sbjct: 257 GVFVKYVS--CGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVS 314
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
AG H+ V+ G +G N GQLG+G
Sbjct: 315 VSAGGYHSAAVSATGRIYTWGRNFVGQLGTG 345
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 152/365 (41%), Gaps = 38/365 (10%)
Query: 26 GSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
G TCW G L DG + + + G+ VA H A+ EG WG
Sbjct: 433 GVTCWG--NNESGQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGG 490
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
N GQLG+G QR P V LS + AG SHT +T G +G N +GQLG
Sbjct: 491 NGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGD 549
Query: 145 GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
G+ P V L S V A A G T LS+ G + G Y QLG GT +N
Sbjct: 550 GTTTQRNMPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCW--GWNTYDQLGDGTRTNHN 607
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
T P + L+ + +A G HT A+ + G V WG+ YG+LG
Sbjct: 608 T--------------PVQVEGLS-SGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDG 652
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYP 322
P V N + A I AG ++ + GG + WG K G+ +
Sbjct: 653 TTTQRMTPVVV-----NGLSSEVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQ 707
Query: 323 KPL-MDLSGWN--LRCMDSGNMHHF---VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
+ + MD+ G + + + +G+ H G +C WG YG+LG G +++ P
Sbjct: 708 RSIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTC--WGWDVYGQLGVGTIAYRTT--PV 763
Query: 377 KVDIL 381
V +L
Sbjct: 764 DVTVL 768
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 144/337 (42%), Gaps = 38/337 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ EG WG NE GQLG G IQR P V LS + AG SHT ++ +
Sbjct: 424 HTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEGLSSGVVAIT-AGDSHTCALSTE 482
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N GQLG+G+ P V L S V A G T L++ G + G
Sbjct: 483 GGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGVMAITAGDSHTCALTT--GGGVTCWG 540
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG GT + N + V L+ + +A G +HT A+ ++G
Sbjct: 541 GNWYGQLGDGTTTQRNMPVNVVGLS---------------SGVAAIAAGGSHTCALSTEG 585
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V WG+ Y +LG + + P +V+ A I+AG ++ G++
Sbjct: 586 GVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSG-----VAAIAAGYAHTCALITSGEVTC 640
Query: 309 WG--KLKNNGDDW----MYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHAQY 359
WG GD M P + LS + + +G H G +C WG +Y
Sbjct: 641 WGWNWYGQLGDGTTTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTC--WGWNKY 697
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+LG G Q+S +P VD L V ++A G H+
Sbjct: 698 YQLGNGTISQRS--IPMDVDGLS-SGVAALAAGDAHT 731
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 161/369 (43%), Gaps = 48/369 (13%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
L+ N+ S P+ D + A+ WG NE GQLG G IQR+
Sbjct: 48 LEANIASAQHRTPIAAGDA----------YTCALTTNSAVICWGNNEFGQLGDGTTIQRN 97
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
P V+ LS + A AG +HT +T G +G N+ GQLG+G P V L
Sbjct: 98 TPVAVNGLSSGVVAIA-AGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGL 156
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S V A A G T L++ +GA + G YGQLG GT + +T
Sbjct: 157 SSGVAAIAAGEYHTCALTT-DGA-VTCWGSNGYGQLGDGTTTQRST-------------- 200
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P +A L+ + + G +HT A+ + G V WG G G+LG P V+V
Sbjct: 201 PVQVAGLS-SGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTP--VNVLG 257
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNL 333
++ + A I+AG V + GG + W G+L + D+ P ++ LS +
Sbjct: 258 LSSEV---AAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS-GV 313
Query: 334 RCMDSGNMHHF---VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ +GN H G SC WG QY +LG G Q+S+ P V+ L ++A
Sbjct: 314 TAIAAGNDHTCAITTGGGVSC--WGVNQYSQLGDGTTTQQST--PVVVNGLS-SRAAAIA 368
Query: 391 CGYGHSLVI 399
G GH+ +
Sbjct: 369 AGDGHTCAM 377
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 152/375 (40%), Gaps = 57/375 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ G WG NE GQLG+G IQR P V+ LS + AG HT +T D
Sbjct: 118 HTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSS-GVAAIAAGEYHTCALTTD 176
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N +GQLG G+ P V L S VTA G T L++ G ++ G
Sbjct: 177 GAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCALTT--GGAVTCWG 234
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEA-------------------------------- 216
GQLG GT + +T + + L+ E
Sbjct: 235 RNGNGQLGDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGD 294
Query: 217 -----QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P + L+ + +A G +HT A+ + G V WG Y +LG +
Sbjct: 295 GTTDERSTPVDVVGLS-SGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQST 353
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMD 327
P V N + A I+AG ++ GG + WG+ +G P M
Sbjct: 354 PVVV-----NGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTP-MQ 407
Query: 328 LSGWNLRCMD--SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
+ G + D +G+ H + + WG+ + G+LG G Q+S+ P +V+ L
Sbjct: 408 VEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRST--PVQVEGLS-S 464
Query: 385 HVISVACGYGHSLVI 399
V+++ G H+ +
Sbjct: 465 GVVAITAGDSHTCAL 479
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 163/406 (40%), Gaps = 45/406 (11%)
Query: 10 VEEETGKEKGGELLFC------GSTCWDAVGRRKGALDGNLVSPTRLRPL--VGVDIRFV 61
+ E G++ C G TCW A G L G+ + R P+ VG+
Sbjct: 258 LSSEVAAITAGDVYTCALTTGGGVTCWGA--NWSGQL-GDGTTDERSTPVDVVGLSSGVT 314
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
A + H A+ G WG N+ QLG G Q+ P +V+ LS A AG H
Sbjct: 315 AIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRAAAIA-AGDGH 373
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +T G +G N GQLG G+ P V L S V G T LS+ G
Sbjct: 374 TCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCALSTEGG 433
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G + GQLG GT + +T P + L+ +V + G +HT
Sbjct: 434 VTCW--GNNESGQLGDGTTIQRST--------------PVQVEGLS-SGVVAITAGDSHT 476
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
A+ ++G V WG G G+LG+ P +V+ + I+AG ++
Sbjct: 477 CALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGVM-----AITAGDSHTCALT 531
Query: 302 GGGQLYMWGK--LKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
GG + WG GD P ++ LS + + +G H + + W
Sbjct: 532 TGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS-GVAAIAAGGSHTCALSTEGGVTCW 590
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G Y +LG G + + P +V+ L V ++A GY H+ ++
Sbjct: 591 GWNTYDQLGDGT--RTNHNTPVQVEGLS-SGVAAIAAGYAHTCALI 633
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 67/322 (20%)
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
HG+++ DRP +V L+ + G +H+ +T G+ L +G ++G+LG G +++
Sbjct: 1 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 60
Query: 152 EPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P V L+ ACG+ L + ++ + G YG+LG G +
Sbjct: 61 RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GC 113
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
KL Y+ I +LAG +VKV CG+ +VA+ G VYTWG G + RLGH
Sbjct: 114 KLPYK-------IESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR 166
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG 330
P++V Q ++ I+ GS++ + G++Y WG + D+
Sbjct: 167 RPKKVAALQGKKIIS----IATGSLHCVACSDSGEVYTWG----DNDE------------ 206
Query: 331 WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
G+LG G + P+ V L+G H++ V
Sbjct: 207 -----------------------------GQLGDGTV--TAIQWPRLVTALQGKHIVKVT 235
Query: 391 CGYGHSLVIVDRTNVGERLDQL 412
CG H+L + + + ERL L
Sbjct: 236 CGSAHTLAL-STSQLSERLRPL 256
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + +A G S H A+ G TWG+ G+LGHGD + RP +V
Sbjct: 10 PKLVEHLNGMSVADIACG--SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA 67
Query: 107 LSKYKIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L Y+ G+G + T+ +T+D N ++G +G+LG G P + L V
Sbjct: 68 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGV 127
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ + ++ G + +LGHG+ + RP+ +
Sbjct: 128 VKVECGSQFSVALT--KSGAVYTWGKGDFHRLGHGSVDHVR--------------RPKKV 171
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL G+ I+ +A G+ H VA G VYTWG G+LG PR V Q ++
Sbjct: 172 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHI 231
Query: 284 L 284
+
Sbjct: 232 V 232
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ + V C S VA+ G YTWG+ + +LGHG RP V+
Sbjct: 116 PYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAA 173
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L KI G H V ++ G +G N GQLG G++ P V L +
Sbjct: 174 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVK 233
Query: 166 TACGADFTVWLSS 178
CG+ T+ LS+
Sbjct: 234 VTCGSAHTLALST 246
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 32/234 (13%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I+ ++AG S A+ V+G+ + WG N GQLG ++ TI K K A
Sbjct: 144 IKQLSAG--SNMSAALTVDGKLFMWGDNSEGQLG------LEKGTIYCTPQKVDTGKPIA 195
Query: 118 ----GRSHTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G H+ VT+DG FG ++G+LG I+ +P V L +VT +CG +
Sbjct: 196 WISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGE 255
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T+ ++ E + GL Q+GQLGHGT +E P+A+ AL + I
Sbjct: 256 HTIAVTEKE---VYTFGLGQFGQLGHGT------------FIFETH-IPKAVDALTKKKI 299
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNV 283
V CG NHT + KG +YT+G G +G+LG E+ +++VP F + V
Sbjct: 300 RYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTV 353
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 46/337 (13%)
Query: 77 GRCYTWGRNERGQ-LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G +T+G+++ + + ++ D+P +S G HTV+VT +G FG
Sbjct: 14 GALFTFGKSKFAENIPSKFWLKNDKPARIS-----------CGDEHTVLVTGNGKLYVFG 62
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG + +P+ V+ L SE V ACG T L E + ++G GQ
Sbjct: 63 SNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT--LVYTEQGKLYSSGGNSEGQ 120
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTW 253
LG G D++ + +++ I+ + +K ++ G+N + A+ G ++ W
Sbjct: 121 LGLG--------DTAGRTSFQ------EISFFTAQYKIKQLSAGSNMSAALTVDGKLFMW 166
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G G+LG + P++VD + P A IS G +S+ G+LY +G+ +
Sbjct: 167 GDNSEGQLGLEKGTIYCTPQKVDTGK------PIAWISCGYYHSAFVTQDGELYTFGEPE 220
Query: 314 NNG--------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
N P+ ++ LSG + + G H + ++G Q+G+LG+G
Sbjct: 221 NGKLGLPPDKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEKEVYTFGLGQFGQLGHG 279
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ ++ +PK VD L + V CG H+ +I ++
Sbjct: 280 TFIFETH-IPKAVDALTKKKIRYVTCGENHTAIITEK 315
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V V G+ Y +G N GQLG +PT V L K+ A GR HT
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
+V TE G + G N GQLG G EI + + +++A + A TV
Sbjct: 102 LVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDG 161
Query: 175 ----WLSSVEGASILNAG----LPQYGQLGHGT--------DNEYNTKDSSVKLAYEAQ- 217
W + EG L G PQ G + + T+D + E +
Sbjct: 162 KLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPEN 221
Query: 218 -------------PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
+P+ + L+G+ + V+CG HT+AV K VYT+G G +G+LGH
Sbjct: 222 GKLGLPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHG 279
Query: 265 EQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
E +P+ VD + + ++ G +++ G LY +G
Sbjct: 280 TFIFETHIPKAVDALTKKKI----RYVTCGENHTAIITEKGLLYTFG 322
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYK 111
++G+ + C H +AV E YT+G + GQLGHG I + P V L+K K
Sbjct: 240 VLGLSGKVTMVSCGGEHTIAV-TEKEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKK 298
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATAC 168
I+ G +HT ++TE G FG +HG+LG G + P+ C L V + AC
Sbjct: 299 IRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVAC 358
Query: 169 G 169
G
Sbjct: 359 G 359
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 32/329 (9%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ ++V L + ++ G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG + E PS V+ L + A + +G + G +YGQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCG---- 124
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
E +KD + + P+ A T+ +VA G H+V + +GYV+TWG
Sbjct: 125 -EEPSKDETGRPVRRDIVIPKRCAQQL--TVRQVAAGGTHSVVLTREGYVWTWG------ 175
Query: 261 LGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
W P +++ V R L +I+ G+ ++ G L+ WG +
Sbjct: 176 -------QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQL 228
Query: 314 NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
GD YP P+ L L + +G H + + WG ++G LG+G +
Sbjct: 229 GTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKS 288
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
S +P+KV++L G +I V+CG HS+ +
Sbjct: 289 SKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 40/277 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
+P+ ++ L +++ V A HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 81 TPSLVKSLA--NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
D + +++ AG +H+VV+T +G + W G I+ P V+
Sbjct: 139 DIVIPKRCAQQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISVPVRVQG 194
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
L V A GA L+ E ++ G +YGQLG G + QP
Sbjct: 195 L-ENVRLIAVGAFHN--LALKEDGTLWAWGNNEYGQLGTG----------------DTQP 235
Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
R P + L T+V +A G H+ A+ ++G VY WG G +GRLG ++ + +P++
Sbjct: 236 RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
V++ +++ +S G +S G+++ +G+
Sbjct: 296 VNLLAGEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 62/379 (16%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKK 114
++R V G S + +A+ +G+ +TWG N+RG LGH + + + P++V L+ KI +
Sbjct: 38 FNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
A G H + V + G + A+G N++GQ G ++E PVR + V C TV
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAQQLTV 152
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAAL 226
+ AG GT + T++ V + P P + L
Sbjct: 153 --------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGL 195
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E + +A G H +A+ G ++ WG YG+LG + + P V ++
Sbjct: 196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD- 252
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
I+AG +S+ G++Y WG+ + N+ M P+ + L+G ++ +
Sbjct: 253 ---IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSC 309
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGMH--------- 385
G H + D S+G +G LGYG GQ +P + EG
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIHIPPPEGRFNHTDEEDDG 368
Query: 386 ---VISVACGYGHSLVIVD 401
VACG H+L IV+
Sbjct: 369 KWIAKHVACGGRHTLAIVE 387
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L ++R +A G + H +A+ +G + WG NE GQLG GD R P V
Sbjct: 189 PVRVQGLE--NVRLIAVG--AFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
L + AG H+ +T +G +G +HG+LG G +++ P V L E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ I + G +G+LG+G T ++L P
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIHIPPPEGRF 359
Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
G+ I K VACG HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 182 ASILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY----------- 214
S++ G + GQLG GTD E +N + S LA
Sbjct: 5 TSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64
Query: 215 ------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ + P + +LA IV+ A G H +AVD +G Y WG YG+ G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYMWGKLKNN 315
KDE R V +R+ V+P ++AG +S G ++ WG+
Sbjct: 125 EEPSKDE-TGRPV---RRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM 374
GD P+ N+R + G H+ + D + +WG+ +YG+LG G +S +
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI 240
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVP 434
P V L+ + ++ +A G HS + TN GE G+ DN D++S +
Sbjct: 241 P--VQGLDDLTLVDIAAGGWHSTAL---TNEGEVYGWGRGEHGRLGFGDN---DKSSKML 292
Query: 435 PKK 437
P+K
Sbjct: 293 PQK 295
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKRIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 122 CTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 KVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 226 RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N +
Sbjct: 71 LCGKRIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L GV + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 276 PTQIMVEKERVIEIAACHSTHT 297
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 156/383 (40%), Gaps = 47/383 (12%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
++ + + P L V +D++ ++ G H V +G Y+WG G+LGHG
Sbjct: 294 VNMDCLIPKPLEFAVKLDVQNISCG--GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP 351
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVR 157
+P ++ L+ I+ G HT VT G+ + G + G LG G+ + P V
Sbjct: 352 QPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVN 411
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V+A +CG T ++S + G +G LGHG +
Sbjct: 412 GPLEGIHVSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV---------- 459
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGH 263
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH
Sbjct: 460 ----PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH 515
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDD 318
++ VP V V P I+ G + G +Y ++G+L N D
Sbjct: 516 GDKDTRLVPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQAD 571
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
M P + N S +H + + + +WG G LG+G +SS P
Sbjct: 572 GMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PT 629
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
V+ L+ V +V CG + I
Sbjct: 630 LVEALKDKQVRTVVCGINFTAAI 652
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 361 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 416
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 474
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 475 ACGVWHTAAVVE 486
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 156/383 (40%), Gaps = 47/383 (12%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
++ + + P L V +D++ ++ G H V +G Y+WG G+LGHG
Sbjct: 340 VNMDCLIPKPLEFAVKLDVQNISCG--GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP 397
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVR 157
+P ++ L+ I+ G HT VT G+ + G + G LG G+ + P V
Sbjct: 398 QPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVN 457
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V+A +CG T ++S + G +G LGHG +
Sbjct: 458 GPLEGIHVSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV---------- 505
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGH 263
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH
Sbjct: 506 ----PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH 561
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDD 318
++ VP V V P I+ G + G +Y ++G+L N D
Sbjct: 562 GDKDTRLVPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQAD 617
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
M P + N S +H + + + +WG G LG+G +SS P
Sbjct: 618 GMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PT 675
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
V+ L+ V +V CG + I
Sbjct: 676 LVEALKDKQVRTVVCGINFTAAI 698
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 407 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 462
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 463 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 520
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 521 ACGVWHTAAVVE 532
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 163/379 (43%), Gaps = 54/379 (14%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 303 PKALESAVVLDVQNIA--CGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIES 360
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
LS I+ G HT VT G+ +G +N +G LG G+ + P V +
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKRVNGPLEGI 419
Query: 162 EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V++ +CG W ++V +S + G +G LGHG SV L
Sbjct: 420 HVSSISCGP----WHTAVVTSSGQLFTFGDGTFGALGHG-------DRKSVSL------- 461
Query: 220 PRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQK 267
PR I +L G V+ ACG HT AV S G ++TWG G GRLGH +++
Sbjct: 462 PREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 521
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
+ VP V ++ P ++ G + + G +Y ++G+L N D P
Sbjct: 522 SKLVPTCVVT-----LVEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLP 576
Query: 323 KPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ LS + + G H + + + +WG G LG+G +++ P V+
Sbjct: 577 IRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNT--PTLVEA 634
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ V S+ACG + I
Sbjct: 635 LKDKQVKSIACGTNFTAAI 653
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G V++WG GRLGH D P+ ++
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G+ W+ + L G
Sbjct: 363 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG 418
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V S ++G +G LG+G +KS ++P++++ L+G+ +
Sbjct: 419 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG--DRKSVSLPREIESLKGLRTVQA 476
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 477 ACGVWHTAAVVE 488
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 135/358 (37%), Gaps = 42/358 (11%)
Query: 74 DVEGRCYTWGRNERG--------QLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
D G + WG Q+G G K+ P + ++ G H
Sbjct: 266 DALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKHAA 325
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGA 182
+VT+ G ++G G+LG G + P + L + + ACG T ++
Sbjct: 326 LVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDL 385
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
G YG LGHG + P+ R L G + ++CG HT
Sbjct: 386 YTWGDGTYNYGLLGHGNQVSHWV------------PK-RVNGPLEGIHVSSISCGPWHTA 432
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
V S G ++T+G G +G LGH ++K +PR ++ + + + + G
Sbjct: 433 VVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVG 492
Query: 303 --------GGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
G+L+ W G+L + + + + P ++ L N + +M +
Sbjct: 493 NSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQVACGHSMTVALSRS 552
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
+ G YG+LG Q +P +V+ L V +ACG H V+ RT V
Sbjct: 553 GHVYTMGSCVYGQLG---NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEV 607
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLDALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + I+ A +HT
Sbjct: 276 PAHIMVEKERVIEIAACHSAHT 297
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 KVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPVHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PVHIMVEKERVVEIAACHSAHT 297
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G + WG N G+LG G I R P VS L++ A G H++ + D
Sbjct: 279 HNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSAISAAFG--HSMALKSD 336
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G+N GQLG+ SI + P V V+ ++A G D+++ + S ++ G
Sbjct: 337 GTLWTWGYNNRGQLGNNSITQSLVPVQVLTGVASISA---GYDYSLAVKS--DGTVWAWG 391
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
YGQ G+ + T DS V P ++ L G T + N H++A+ S
Sbjct: 392 RNYYGQFGNNS-----TIDSLV---------PIQVSGLTGVTSISATSSNNYSHSLALKS 437
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G V+ WG+ G+LG+ VP V V+ ISAGS +S G
Sbjct: 438 DGTVWGWGYNSTGQLGNNSATQSLVP--VQALGLTGVVS----ISAGSNHSMALKSDGTA 491
Query: 307 YMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
++W G+L NN + P + LSG + + +GN H + +D + +WG
Sbjct: 492 WIWGGNSDGQLGNNSTAQSLVPVQVPGLSG--VSAISAGNYHSMALKSDGTVWAWGRNSS 549
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG ++ + +L G SV+ G HS+ +
Sbjct: 550 GQLG----NNSTTVSLVPIQVLTG--TTSVSAGTYHSMAL 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N + P ++ L V A G H +A+ +G +TWG N RGQLG+ Q P
Sbjct: 307 NRIVPVQVSGLTEVSAISAAFG----HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPV 362
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
V + AG +++ V DG A+G N +GQ G+ S + + P V L V
Sbjct: 363 QVLT----GVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGV 418
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ ++AT+ +++ L+ ++ G GQLG+ + A
Sbjct: 419 TSISATSSN-NYSHSLALKSDGTVWGWGYNSTGQLGNNS----------------ATQSL 461
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ AL +V ++ G+NH++A+ S G + WG G+LG+ VP +V
Sbjct: 462 VPVQALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVP---- 517
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRC 335
L + ISAG+ +S G ++ WG+ L NN + P+ L+G
Sbjct: 518 --GLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTT-VSLVPIQVLTG--TTS 572
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGEL 362
+ +G H + +D + WG+ +Y ++
Sbjct: 573 VSAGTYHSMALKSDGAVWGWGNNEYKKI 600
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 62/379 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV + H +A+ +G + WG N GQLG+ Q P V
Sbjct: 409 PIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNSATQSLVP--VQA 466
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVT 164
L + AG +H++ + DG + +G N GQLG+ S + P V L VS ++
Sbjct: 467 LGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLSGVSAIS 526
Query: 165 A-----TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
A A +D TVW G GQLG+ + ++V L
Sbjct: 527 AGNYHSMALKSDGTVWA----------WGRNSSGQLGNNS--------TTVSLV------ 562
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
I L G T V+ GT H++A+ S G V+ WG Y ++ D+ VP + +
Sbjct: 563 --PIQVLTGTT--SVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNA 618
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQ------------LYMWGK-----LKN-NGDDWMY 321
+ V S+ + S T+ GG ++ WG L N G+ +
Sbjct: 619 YISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLV 678
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
P+ DL+G + + +G H + +D + +WG YG LG +S++P +V
Sbjct: 679 GYPVRDLTG--VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNN--STVTSSIPVQVSG 734
Query: 381 LEGMHVISVACGYGHSLVI 399
L G V SV G HS+ +
Sbjct: 735 LTG--VSSVKAGRLHSMAL 751
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ ++AG H + + +G + WGRN GQLG+ P V L+ + AG
Sbjct: 787 DVIAISAG--DYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAG 844
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
S V DG +LA+G N +GQL GS + P V V + A+ +
Sbjct: 845 TNTS--AAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLI 902
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
++G ++ G YG +G+ + DS V P LAG +V ++
Sbjct: 903 LKLDG-TVWGCGRNDYGPIGNNS-----ITDSKV---------PVQTLGLAG--VVSISA 945
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
G H++A+ S G ++ WG+ GYG+LG P
Sbjct: 946 GLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 137/325 (42%), Gaps = 46/325 (14%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
+R L GV+ ++AG H +A+ +G + WG N G LG+ + P VS L+
Sbjct: 682 VRDLTGVEQ--ISAG--EGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTG 737
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
+ AGR H++ + DG A+G+N GQLG GS + P V L +V A + G
Sbjct: 738 --VSSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGL-EDVIAISAG 794
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
D+ + +G ++ G GQLG+ + T S V P + L G
Sbjct: 795 -DYHSMVIKSDG-TVWAWGRNSNGQLGNNS-----TTGSLV---------PVQVPGLTG- 837
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+ ++ GTN + AV S G WG YG+L +P +V P V
Sbjct: 838 -VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVS--------EPVGV 888
Query: 290 --ISAGSVNSSCTAGGGQLYMW-------GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSG 339
+S NS +W G + NN D P + L+G + + +G
Sbjct: 889 GALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTLGLAG--VVSISAG 946
Query: 340 NMHHF-VGADSSCISWGHAQYGELG 363
H + +D + WG+ YG+LG
Sbjct: 947 LYHSMALKSDGTIWGWGYNGYGQLG 971
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E +V G H +A+ S G V+ WG+ YGRLG + VP +V + L +
Sbjct: 268 EKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQV------SGLTEVS 321
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
ISA +S G L+ W G+L NN P+ L+G + + +G +
Sbjct: 322 AISAAFGHSMALKSDGTLWTWGYNNRGQLGNNSIT-QSLVPVQVLTG--VASISAGYDYS 378
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC--GYGHSLVI 399
V +D + +WG YG+ +G S +P +V L G+ IS Y HSL +
Sbjct: 379 LAVKSDGTVWAWGRNYYGQ--FGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLAL 435
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ E Y+WG+N+ GQLG G +K + P + LS
Sbjct: 136 DIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG H+ +T G +G NK GQLG + +P+ ++ L S+ + CG D T
Sbjct: 196 AAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ G AG YGQLGH + + + PR + L G + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSASH--------------EVNPRKVFELMGNIVTQI 299
Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
ACG HT+A V S G +Y++G GG G+LG
Sbjct: 300 ACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P ++ G G HT V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R + P V L +++ A +CG T+ L+ + + + G +GQ+G
Sbjct: 64 GQLGHDKSRKK--PEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAAHGQIG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
V +A + PR I +L+ IV+VACG +H++A+ + +Y+WG Y
Sbjct: 118 -----------VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E++ E PR + P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
N+ D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+L V
Sbjct: 283 VN--PRKVFELMGNIVTQIACGRQHTLAFV 310
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAG 118
VA C H +A++ +G+ ++WG GQ+G R P + LS +I + G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
H++ ++++ N ++G N++GQLG GS R E P ++ L A +
Sbjct: 146 HHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFAL 205
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
++ GA I G ++GQLG ++E + D P + +L + I+ + CG
Sbjct: 206 TISGA-IFGWGRNKFGQLG--LNDETDRSD------------PALLKSLRSQKIIYICCG 250
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA--------V 289
+HT A+ +G V+T+G GGYG+LGH E PR+V N V V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFV 310
Query: 290 ISAGSVNSSCTAGGGQL 306
S+G + S G GQL
Sbjct: 311 PSSGRIYSFGLGGNGQL 327
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 33/339 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
++ P R + ++R V GC + H V +G YT G N+ GQLGH DK R +P
Sbjct: 22 VIEPRRCDFFINKNVRDV--GCGNRHTGFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
V L I G +HT+ + + G ++G HGQ+G + I P ++ L
Sbjct: 78 VGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI 137
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG ++ LS + ++I + G QYGQLG G++ K+S+ PR
Sbjct: 138 QIVQVACGHHHSLALS--KESNIYSWGQNQYGQLGLGSEKR---KESA----------PR 182
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L+G +A G H+ A+ G ++ WG +G+LG ++ D P + +
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQ 242
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLSGWNLRC 335
++ I G +++ G ++ +G+L N+ + P+ + +L G +
Sbjct: 243 KII----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQ 298
Query: 336 MDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSS 372
+ G H FV + S+G G+LG G K S
Sbjct: 299 IACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKS 337
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I E+ P RC + V CG T ++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH D S K +P + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGH---------DKSRK-------KPEQVGALDAQIIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V++WG +G++G +D VPR + ++ ++ G +S + +Y
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ----VACGHHHSLALSKESNIY 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ L + P+ + LSG + +G H F S I WG ++
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +S P + L +I + CG H+
Sbjct: 220 GQLGLNDETDRSD--PALLKSLRSQKIIYICCGEDHT 254
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PALLKSLRSQKIIYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT+ V G +FG +GQLG GS N+ PS V+
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 38/372 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G+ +R+ + L + AG +++ +TEDG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG ++E PS V+ L + A + +G + G +YGQ G +
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPE 128
Query: 201 NEYNT-KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ NT + +A + P+ I + +VA G H+V + +G+V+TWG
Sbjct: 129 KKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWG----- 176
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
W P ++ V R L +I+ G+ ++ G L+ WG +
Sbjct: 177 --------QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228
Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
GD P P+ LSG L + +G H D+ + WG ++G LG+G +
Sbjct: 229 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDK 288
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD--RTNVGERLDQLDV-YDGKASSQDNEE 426
S +P+KV +L G ++ ++CG HS+ + R R D + Y K ++ EE
Sbjct: 289 SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEE 348
Query: 427 IDRNSTVPPKKG 438
+ + +PP +G
Sbjct: 349 VPID--IPPPRG 358
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P R P + +R VAAG H V + EG +TWG+ GD Q P
Sbjct: 140 DIAIPQRCAPKL--IVRQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDITQISVPV 191
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
V L ++ GA H + + EDG A+G N++GQLG+G + +P PV+ L +
Sbjct: 192 RVQGLDMVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ V A G T + + + G ++G+LG G DN D S K+ P
Sbjct: 250 TLVDIAAGGWHST---ALTDNGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------P 294
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ + L+GE IV+++CG H+VAV S G ++++G G +GRLG+ + P V +
Sbjct: 295 QKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPI--- 351
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQ 305
++ PP G + A GG+
Sbjct: 352 -DIPPPRGRTENGHWIAKLVACGGR 375
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 164/378 (43%), Gaps = 55/378 (14%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELS 108
++ L ++ V AG S + +A+ +G+ +TWG N+RG LGH + + P+ V LS
Sbjct: 32 IKALESQNVCSVVAG--SRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALS 89
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
KI +A G H + V + G + A+G N++GQ G + + P R ++ C
Sbjct: 90 NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA--IPQRC 147
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
V + AG GT + T++ V + P P I ++
Sbjct: 148 APKLIV--------RQVAAG---------GTHSVVLTREGHVWTWGQPWP-PGDITQISV 189
Query: 229 ETIVK-------VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
V+ +A G H +A+ G ++ WG YG+LG + + P V
Sbjct: 190 PVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNL 333
++ I+AG +S+ G++Y WG+ + N+ M P+ + LSG +
Sbjct: 250 TLVD----IAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI 305
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--------LEGM 384
+ G H V +D S+G +G LGYG + ++ P++V I E
Sbjct: 306 VQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGR--KVTTGQPEEVPIDIPPPRGRTENG 363
Query: 385 HVIS--VACGYGHSLVIV 400
H I+ VACG H+L +V
Sbjct: 364 HWIAKLVACGGRHTLALV 381
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 47 PTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R++ G+D +R +A G + H +A+ +G + WG NE GQLG GD R +P V
Sbjct: 190 PVRVQ---GLDMVRLIAVG--AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SE 162
LS + AG H+ +T++G +G +HG+LG G +++ P V+ L E
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE 304
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ +CG +V ++S + + G +G+LG+G T ++ + P PR
Sbjct: 305 IVQISCGGTHSVAVTS--DGRMFSFGRGDHGRLGYG---RKVTTGQPEEVPIDIPP-PRG 358
Query: 223 IAALAGETIVK-VACGTNHTVAV 244
G I K VACG HT+A+
Sbjct: 359 RTE-NGHWIAKLVACGGRHTLAL 380
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEVASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G + Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +L L G + ++ G H + V +G Y WG N QLG+G Q P +V
Sbjct: 63 IAPKKLDCLSGKKLISLSYGS-GPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
S L ++ + G H++ +T +G A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 STNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK 181
Query: 163 VTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ + + G GQLG G + Q P
Sbjct: 182 VIVNIACGQ--TSSMAVTDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ AL G ++++A G H++A+ +G +Y WG YG+LG + ++ P +V
Sbjct: 226 RLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQV------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
+ E ++ + +S+ T+ GQ+YMWG+ +
Sbjct: 280 -MTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCR 314
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 35/297 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I++A GA + + +T D G N LG+G ++ I P + C
Sbjct: 11 TLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L + +G + G Y QLG+GT N+
Sbjct: 71 LSGKKLISLSYGSGPHVLLVTEDG-ELYAWGHNGYSQLGNGTTNQ--------------G 115
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P ++ L G+ + +V+CG++H++A+ +G V+ WG+ G++G ++ PR+V
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVS 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
+N V+ I+ G +S G++Y WG L NNG+ + P L+ L
Sbjct: 176 NCLQNKVI---VNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLIALQ 231
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS---AMPKKVDILE 382
G+ + + SG H D + +WG YG+LG G + S M +K I+E
Sbjct: 232 GFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVE 288
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
PK L LSG L + G+ H V D +WGH Y +LG G Q S + +
Sbjct: 65 PKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTN 124
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+G V V+CG HSL +
Sbjct: 125 -LQGKRVTEVSCGSHHSLAL 143
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 157/375 (41%), Gaps = 53/375 (14%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ + G H V +G +TWG G+LGHG ++ RP
Sbjct: 247 DVLTPRPLESNVVLDVHQIVCGVR--HVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 304
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ I G HT VV+ G+ ++G H G LG GS + P P+
Sbjct: 305 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 364
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ A+ + G +G LGHG
Sbjct: 365 EGL--QVLSVACGT----WHSALATANGKLFTFGDGAFGVLGHGNR-------------- 404
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
E+ P+ + +L G VKVAC HT A+ S ++TWG G RLGH
Sbjct: 405 ESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHG 464
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
++ +P V N I+ G + G ++ G+L N+ D
Sbjct: 465 NKETYLLPTCVSSLIDYNF----HKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDG 520
Query: 320 MYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D L G + + G H + + S +WG G LG+G K + P
Sbjct: 521 KLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRT--PTL 578
Query: 378 VDILEGMHVISVACG 392
V+ L HV S++CG
Sbjct: 579 VEALRDRHVKSLSCG 593
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + ++ CG H V +G V+TWG GRLGH Q D P+ V+
Sbjct: 251 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA 310
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++ G ++ + G L+ WG L +G D W+ + L G
Sbjct: 311 LTNI----DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEG 366
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H A+ ++G +G LG+G ++S + PK+V L G+ + V
Sbjct: 367 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKV 424
Query: 390 ACGYGHSLVIVD 401
AC H+ IV+
Sbjct: 425 ACSIWHTAAIVE 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 39/214 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVA-VDVEG---------RCYTWGRNERGQLGHGDKI 96
P ++ L G ++ V C H A V+V G + +TWG ++ +LGHG+K
Sbjct: 410 PKEVQSLNG--LKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKE 467
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
PT VS L Y K G + TV +T G+ G HGQLG N I +
Sbjct: 468 TYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-----NSISDGKL 522
Query: 157 RCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
CLV + V ACGA L+S + + G G+LGHG + T
Sbjct: 523 PCLVQDRLVGEFVEEIACGAHHVAVLTS--RSEVFTWGKGANGRLGHGDTEDKRT----- 575
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + ++CG+N T ++
Sbjct: 576 ---------PTLVEALRDRHVKSLSCGSNFTSSI 600
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEITSIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 27/265 (10%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G+L CGS + +G K + L + ++ + A S + + G
Sbjct: 54 KDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLS-SMQVIQAAGGSEFSLVITTAG 112
Query: 78 RCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
++WGRN++GQLG G K + +P ++ L+ + + G +H + +T+DG ++G
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172
Query: 136 WNKHGQLGSGSIRNEIE-PSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLP 190
NK+GQLG GS + + P + CL ++++ + + W +V G G
Sbjct: 173 CNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGW-----GKN 227
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG ++EY+ + P +L + ++ ++CG +HTVA+ +G V
Sbjct: 228 SFGQLG--LNDEYD------------KSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGV 273
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRV 275
+++G GG+G+LGH ++E +P+RV
Sbjct: 274 FSFGAGGFGQLGHNSTQNEILPKRV 298
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 35/333 (10%)
Query: 80 YTWGRNERGQL--GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WGR+ GQL G ++ P VS L + IK+ G HT++VT+DG + G N
Sbjct: 5 FGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSN 64
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-----EVTATACGADFTVWLSSVEGASILNAGLPQY 192
++G+LG R+ V LVS +V A G++F++ +++ + + G
Sbjct: 65 EYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITT--AGEVFSWGRNDK 122
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G KL+ E + +P+ + +LA T+V++ CG NH +A+ G +++
Sbjct: 123 GQLGRG------------KLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFS 170
Query: 253 WGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
WG YG+LG P+++ + P A I++G +S ++ WGK
Sbjct: 171 WGCNKYGQLGLGSSHSFHDTPQQIVCLRG----IPIAQIASGGNHSFILTWSRAVFGWGK 226
Query: 312 LK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
N+ D +P L + + G H + + S+G +G+LG+
Sbjct: 227 NSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGH 286
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
++ +PK+V L G + VACG H++
Sbjct: 287 N--STQNEILPKRVMELMGSVISQVACGRRHTV 317
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L G+ I +A+G H + + WG+N GQLG D+ + PT+
Sbjct: 190 TPQQIVCLRGIPIAQIASG--GNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCK 247
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HTV +T++G +FG GQLG S +NEI P V L+ S ++
Sbjct: 248 SLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVIS 307
Query: 165 ATACGADFTVWLSSVEG 181
ACG TV S G
Sbjct: 308 QVACGRRHTVAFSPSSG 324
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 45/182 (24%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ ++ L I +++CG HT+ V G +Y+ G YG LGH + + V +DV +
Sbjct: 28 PKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SIDVVE 85
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+ L VI A AGG S ++L +G
Sbjct: 86 LVSSLSSMQVIQA--------AGG-------------------------SEFSLVITTAG 112
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ SWG G+LG G ++ PK + L V+ + CG H L +
Sbjct: 113 EV----------FSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLAL 162
Query: 400 VD 401
D
Sbjct: 163 TD 164
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 45/287 (15%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSH 121
GC H VA+ G + WG N+ GQLG G++++ D+ P + S I++ G H
Sbjct: 507 GCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKH 565
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
+ V + G+ A+G N GQLG G +R EP+ V L + CG D++ ++S G
Sbjct: 566 CLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL-RQAIDVFCGDDYSACITSNGG 624
Query: 182 ASILNAGL--------------PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
A ++ L + G+LG G D + + K+ +
Sbjct: 625 AQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSV----------- 673
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ + GT+H +A+ ++G Y WG G YGRLG + + P + D P+
Sbjct: 674 --PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDF--------PK 723
Query: 288 AV----ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY--PKPLMDL 328
V ++AG+ +S + G L++WGK ++ Y P+ M L
Sbjct: 724 GVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQL 770
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 164/429 (38%), Gaps = 82/429 (19%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
+G +G+L SP + ++ D+ FV+AG H +D +G YTWG G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDVVFVSAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG------WNKHGQLGSGS 146
GD+ + P V + + G HT+ +T G A+G + G G
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398
Query: 147 IRNEIEPSPVRCLVSEV-------TATACGADFTVWLSSVEGASIL------NAGLPQYG 193
+ S + V V A G D VW V G+S L N P+Y
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE------------TIVKVACGTNHT 241
N D L R + + GE T+ + CG NHT
Sbjct: 457 A---DLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHT 513
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
VA+ G V+ WG G+LG EQ +D++ P ++D F P I+ GS +
Sbjct: 514 VALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-----PIRRIACGSKHCLA 568
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHFVGAD-SSCI----- 352
A G ++ WG + +P + + LR + F G D S+CI
Sbjct: 569 VAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALR----QAIDVFCGDDYSACITSNGG 624
Query: 353 ------------------SWGHAQYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGY 393
+WG A+ G+LG G S + P+KV + V + + G
Sbjct: 625 AQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGT 682
Query: 394 GHSLVIVDR 402
H+L I R
Sbjct: 683 SHALAITAR 691
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 143/372 (38%), Gaps = 74/372 (19%)
Query: 77 GRCYTWGRNERGQLGH-------GDKIQRD---------------RPTIVSELSKYKIKK 114
G+ YT+G RG+LG+ G + Q D +P V K KI +
Sbjct: 126 GKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIAR 185
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-------------- 160
G HT+ +++ G A+G +G LG G + SPVR L+
Sbjct: 186 ISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAY--SPVRVLLGSEKGSGKKKENLG 243
Query: 161 ------SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V T C A ++ ++ G G+LG G +N S
Sbjct: 244 IGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLG----HNRGSLS----- 294
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P + + +V V+ G +H+ +D +G +YTWG GG+GRLGH +Q + VPR+
Sbjct: 295 -----PAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRK 349
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKPL 325
V+ F VL ++ G+ ++ G ++ WG G PK L
Sbjct: 350 VEGFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHL 405
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGM 384
D+ L V + WG LG+G Q++ PK V D+ M
Sbjct: 406 SDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG--DQQNQPFPKYVADLRNRM 463
Query: 385 HVISVACGYGHS 396
+V + G S
Sbjct: 464 YVADLQSMLGVS 475
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 149/411 (36%), Gaps = 92/411 (22%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKK----- 114
+SC H +A+ G Y WG G LG GD P V SE K K+
Sbjct: 186 ISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIG 245
Query: 115 -----------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
AG H++ T DG +G +G+LG G R + P+ V ++
Sbjct: 246 RRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRD 305
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
D +G + G +G+LGHG E P PR +
Sbjct: 306 VVFVSAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI--------------PVPRKV 350
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW---VPRRVDVFQR 280
G +++VACGT HT+A+ KG V+ WG G LG E VP+ +
Sbjct: 351 EGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHL----- 405
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDL------ 328
+++ ++AG +S+ GG L +WG +GD + +PK + DL
Sbjct: 406 SDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465
Query: 329 ---------------------------------SGWNLRCMDSGNMHHFVGADSSCI-SW 354
+ W L+ + G H + + W
Sbjct: 466 ADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVW 525
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G G+LG G ++ P K+D + +ACG H L + +V
Sbjct: 526 GSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIACGSKHCLAVAQYGDV 575
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR N +PT+ GV IR VAAG + H +A+ ++G + WG+ E
Sbjct: 703 GRLGIGTTANAYAPTKCDFPKGVRIRSVAAG--ASHSLALSMDGDLWIWGKKE----DTC 756
Query: 94 DKIQRDRPTIVSELSKY----KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
+ P I +L K+K A H++ VTE G A+G NK Q G G +
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816
Query: 150 EI--EPSPVRCL--VSEVTATACGADFTVWLS-SVEGASILNAG 188
E P + L V + AT A F V S V A ++N G
Sbjct: 817 ERLDRPEMIAGLPNVCQWVATGPQASFFVLCSGEVYAAGVINGG 860
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 91/239 (38%), Gaps = 60/239 (25%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAV-----DSKGYVYTWGFGGYGRLGH---------RE 265
P + + + +V+CGTN++ + S G VYT+G G GRLG+ R+
Sbjct: 93 PGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQ 152
Query: 266 QKDE----------WV---PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
Q D+ W P RV + + A IS G+ ++ + GG LY WG
Sbjct: 153 QGDDAGDGQEDGPSWFTPKPARVRFRDKCKI----ARISCGADHTLALSDGGALYAWGVG 208
Query: 313 K----NNGDDWMYPKPLMDLSGWN---------------------LRCMDSGNMHHFV-G 346
GD P+ L G + C +G H
Sbjct: 209 SYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACT 268
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+D + +WGH G LG G + S P VD + V+ V+ G HS I DR V
Sbjct: 269 SDGTLWTWGHGGNGRLGLG--HNRGSLSPAVVDYILDRDVVFVSAGDSHSACI-DRQGV 324
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G++++P + V + A + H +A+ G CY WG G+LG G P
Sbjct: 661 GSILTPQK----VPFSVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAP 716
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
T +I+ AG SH++ ++ DG+ +G
Sbjct: 717 TKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWG 750
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
DI+ V C H +A+ ++WG+N+ GQLG G + ++ P ++ L +
Sbjct: 85 DIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQI 144
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 145 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 204
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 205 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 247
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
VACG HT A V S G +Y++G GG G+LG
Sbjct: 248 VACGRQHTSAFVPSSGRIYSFGLGGNGQLG 277
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 36 VAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGY 95
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ ++G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 96 YHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLT 155
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 156 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 197
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 237
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 129 SPQLIKSLLGIPFMQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 186
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 187 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 246
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 247 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 280
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 47/319 (14%)
Query: 73 VDVEGRCYT----WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
V +GR +T W ER Q V L I G +HT+ + +
Sbjct: 6 VPAQGRMWTQDLWWDSQEREQ--------------VVALDAQNIVAVSCGDAHTLALNDK 51
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILN 186
G A+G + GQLG I P ++ L ++ +CG ++ LS +G+ + +
Sbjct: 52 GQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS--KGSEVFS 109
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G +YGQLG G + ++ Q P+ I +L G +++A G H+ +
Sbjct: 110 WGQNKYGQLGLGFE-------------FKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTL 156
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G ++ WG +G+LG ++ D +VP + + ++ I G +++ G +
Sbjct: 157 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAALTKEGGV 212
Query: 307 YM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQ 358
+ +G+L +N + P+ + +L G + + G H FV + S+G
Sbjct: 213 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 272
Query: 359 YGELGYGPYGQKSSAMPKK 377
G+LG G + S K
Sbjct: 273 NGQLGTGSTSNRKSPFTVK 291
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW- 270
L +++Q R + +A L + IV V+CG HT+A++ KG VY WG G+LG ++
Sbjct: 17 LWWDSQEREQVVA-LDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIR 75
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--NNGDDWMY-----PK 323
VPR + ++ +S G +S + G +++ WG+ K G + + P+
Sbjct: 76 VPRNIKSLSDIQIVQ----VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQ 131
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ L G + +G H FV S I WG ++G+LG + +P + L
Sbjct: 132 LIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLR 189
Query: 383 GMHVISVACGYGHS 396
++ + CG H+
Sbjct: 190 SQKIVYICCGEDHT 203
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 31/247 (12%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPR 221
+ A +CG T+ L+ + + GL GQLG GT+ E PR
Sbjct: 35 IVAVSCGDAHTLALN--DKGQVYAWGLDTDGQLGLPGTE--------------ECIRVPR 78
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
I +L+ IV+V+CG H++A+ V++WG YG+LG E K + P+ + +
Sbjct: 79 NIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLI----K 134
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLR 334
+ + P I+AG +S G ++ WG+ K N+ +D P L L +
Sbjct: 135 SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 194
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + + ++G YG+LG+ + + P+KV L G V VACG
Sbjct: 195 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQVACGR 252
Query: 394 GHSLVIV 400
H+ V
Sbjct: 253 QHTSAFV 259
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 182 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 239
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 240 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 135/319 (42%), Gaps = 78/319 (24%)
Query: 18 KGGELLFCGSTCWDAVGR-RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
+ G+L GS W +G K A++ PT ++ L ++ A C H + +
Sbjct: 52 ENGKLYMFGSNNWGQLGFGSKNAVN----KPTCVKALKPEKVKL--AACGRNHTLICTEQ 105
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFG 135
G Y G N GQLG GD +R ++S +K +KIK+ AG + V+TEDG + +G
Sbjct: 106 GNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWG 165
Query: 136 WNKHGQLGSG-----SIRNEIEP-SPVRC------------------------------- 158
N GQ+G G S+ ++++ PV C
Sbjct: 166 DNSEGQIGLGDKAYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLS 225
Query: 159 -----------LVS----EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
LVS +V+ ACG TV L+ + GL QYGQLGHGT
Sbjct: 226 PKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLAE---GDVYTFGLGQYGQLGHGT---- 278
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+E P+ + L I +ACG NHT + G +YT+G G +G+LG
Sbjct: 279 --------FVFETS-EPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGL 329
Query: 264 REQK--DEWVPRRVDVFQR 280
E+ +++VP F R
Sbjct: 330 GEENYTNQFVPTLCSNFLR 348
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G HT VVTE+G FG N GQLG GS +P+ V+ L E V ACG + T L
Sbjct: 43 GDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT--L 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VA 235
E ++ AG GQLG G E +T I+ + +K +A
Sbjct: 101 ICTEQGNVYAAGGNSEGQLGLGDTEERSTF--------------HLISFFTKQHKIKQLA 146
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G+ + + G + WG G++G ++ VP +VD+ + P + IS G
Sbjct: 147 AGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGK------PVSCISCGYY 200
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM--------HHFVGA 347
+S+ G+LY +G+ NG + PK L + L SG + H V A
Sbjct: 201 HSALITQDGELYTFGE-PENGKLGLSPKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLA 259
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ ++G QYG+LG+G + ++S PK VD L + +ACG H+ +I +
Sbjct: 260 EGDVYTFGLGQYGQLGHGTFVFETSE-PKTVDHLGKHKICHIACGENHTALITE 312
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 157/381 (41%), Gaps = 53/381 (13%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GA++ + P L + +D+++VA C H V +G +TWG G+LGHG
Sbjct: 291 GAMNLDAPLPKALESAIVLDVQYVA--CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD 348
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSP 155
P +V L+ + G H VT G+ +G H G LG G+ + P
Sbjct: 349 VSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408
Query: 156 VRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V + E V + ACG T +++ + G +G LGH N + S A
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVVTT--AGQLFTFGDGTFGVLGH------NDRQS----A 456
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
Y PR + +L G V+ ACG HT AV S G ++TWG G GRL
Sbjct: 457 YS----PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNNGD 317
GH +++ VP V +N V S+ + T G M+G+L +
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNF---RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQA 569
Query: 318 DWMYPKP----LMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKS 371
D P L+D ++ C HH V S +WG G LG+G Q+
Sbjct: 570 DGKLPGMVEGRLVDAYVEDIAC----GAHHVACVTLKSEVYTWGKGANGRLGHG--DQED 623
Query: 372 SAMPKKVDILEGMHVISVACG 392
P V+ L+ V S+ACG
Sbjct: 624 RNTPTLVEALKEKQVKSIACG 644
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 37/215 (17%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHG 93
SP + L G +R V A C H AV G+ +TWG ++G+LGHG
Sbjct: 458 SPREVESLKG--LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHG 515
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRN 149
DK QR PT V+ L + +K G S TV +T G G + GQLG G +
Sbjct: 516 DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPG 575
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
+E V V ++ ACGA ++ + + G G+LGHG + NT
Sbjct: 576 MVEGRLVDAYVEDI---ACGAHHVACVTL--KSEVYTWGKGANGRLGHGDQEDRNT---- 626
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + +ACG T AV
Sbjct: 627 ----------PTLVEALKEKQVKSIACGATFTAAV 651
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P P+A+ + + VACG H V +G V+TWG GRLGH D P+ V+
Sbjct: 298 PLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEA 357
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPK----P 324
+ V++ G + G LY WG L +G+D W+ PK P
Sbjct: 358 LASSTT----EVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWI-PKRVNGP 412
Query: 325 LMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L ++ ++ C G H V ++G +G LG+ ++S+ P++V+ L+G
Sbjct: 413 LEEVRVASIAC---GPWHTAVVTTAGQLFTFGDGTFGVLGHN--DRQSAYSPREVESLKG 467
Query: 384 MHVISVACGYGHSLVIVD 401
+ + ACG H+ +V+
Sbjct: 468 LRTVRAACGVWHTAAVVE 485
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR---DRPTI 103
P +R LV + V C + H +A+ G Y+WG N GQLG + + P
Sbjct: 130 PKIIRSLVSKHV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLR 187
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
++ L + G +H+ ++++ FG N GQLG N P+ ++ L +
Sbjct: 188 LTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLG 247
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG +F+V+L++ G AG YGQLGHG++ + PR
Sbjct: 248 VRFVACGDEFSVFLTNEGGVFTCGAG--TYGQLGHGSNTN--------------EMLPRM 291
Query: 223 IAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L G TI +VACG HT+A V S+G VY +G G G+LG+R +P+ V
Sbjct: 292 VMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 155/339 (45%), Gaps = 46/339 (13%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG GQLG G I+ ++ I S++ +++ G HT+ +T +G A G
Sbjct: 4 FCWGNASHGQLGMGG-IEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQ 191
N QLG P+ L+ E V A ACG+ ++ L+ E +L+ G
Sbjct: 63 NDQAQLGHNL------PTKRPLLIPELQNYVVVAIACGSRHSMALT--EWGQVLSWGDND 114
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG TD S ++L P+ I +L + +V++ACG NH++A+ S G +Y
Sbjct: 115 CGQLGQSTD------QSIIEL-------PKIIRSLVSKHVVQIACGNNHSLALTSCGELY 161
Query: 252 TWGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+WG YG+LG + ++ P R+ + P A I+ G +S + ++
Sbjct: 162 SWGSNIYGQLGVKPPQELSHCNYPLRLTTL----LGIPLATIACGGNHSFLISKSSAVFG 217
Query: 309 WGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGE 361
+G+ N+ + YP L L +R + G+ F+ + + G YG+
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
LG+G + +P+ V L G + VACG H+L +V
Sbjct: 278 LGHG--SNTNEMLPRMVMELMGSTITQVACGNRHTLALV 314
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 142/313 (45%), Gaps = 29/313 (9%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G D ++ P+++ +R +A G H + + G+ Y G N++ QLGH +
Sbjct: 18 GIEDEQILIPSQIPWKPDAPLRQIACG--HRHTLFLTANGKVYACGNNDQAQLGHN--LP 73
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
RP ++ EL Y + G H++ +TE G L++G N GQLG + ++ IE P +
Sbjct: 74 TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKII 133
Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
R LVS+ V ACG + ++ L+S + + G YGQLG E + +
Sbjct: 134 RSLVSKHVVQIACGNNHSLALTSC--GELYSWGSNIYGQLGVKPPQELSHCN-------- 183
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + L G + +ACG NH+ + V+ +G G+LG ++ + P ++
Sbjct: 184 ---YPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQL 240
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGD-DWMYPKPLMDLS 329
+ V ++ G S G ++ +G+L + + + M P+ +M+L
Sbjct: 241 KTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVMELM 296
Query: 330 GWNLRCMDSGNMH 342
G + + GN H
Sbjct: 297 GSTITQVACGNRH 309
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G + + P RL L+G+ + +A G H +
Sbjct: 158 GELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACG--GNHSFLISKSSAV 215
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ +GRN GQLG D+ R PT + L ++ G +V +T +G G +
Sbjct: 216 FGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTY 275
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG GS NE+ P V L+ S +T ACG T+ L G + GL GQLG+
Sbjct: 276 GQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG-RVYGFGLGSSGQLGNR 334
Query: 199 TDN 201
+ N
Sbjct: 335 STN 337
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 38/372 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G+ +R+ + L + AG +++ +TEDG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG ++E PS V+ L + A + +G + G +YGQ G +
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPE 128
Query: 201 NEYNT-KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ NT + +A + P+ I + +VA G H+V + +G+V+TWG
Sbjct: 129 KKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWG----- 176
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
W P ++ V R L +I+ G+ ++ G L+ WG +
Sbjct: 177 --------QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228
Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
GD P P+ LSG L + +G H D+ + WG ++G LG+G +
Sbjct: 229 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDK 288
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVD--RTNVGERLDQLDV-YDGKASSQDNEE 426
S +P+KV +L G ++ ++CG HS+ + R R D + Y K ++ EE
Sbjct: 289 SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEE 348
Query: 427 IDRNSTVPPKKG 438
+ + +PP +G
Sbjct: 349 VPID--IPPPRG 358
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P R P + +R VAAG H V + EG +TWG+ GD Q P
Sbjct: 140 DIAIPQRCAPKL--IVRQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDITQISVPV 191
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
V L ++ GA H + + EDG A+G N++GQLG+G + +P PV+ L +
Sbjct: 192 RVQGLDMVRLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ V A G T + + + G ++G+LG G DN D S K+ P
Sbjct: 250 TLVDIAAGGWHST---ALTDNGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------P 294
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ + L+GE IV+++CG H+VAV S G ++++G G +GRLG+ + P V +
Sbjct: 295 QKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPI--- 351
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQ 305
++ PP G + A GG+
Sbjct: 352 -DIPPPRGRTENGHWIAKLVACGGR 375
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 164/378 (43%), Gaps = 55/378 (14%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELS 108
++ L ++ V AG S + +A+ +G+ +TWG N+RG LGH + + P+ V LS
Sbjct: 32 IKALESQNVCSVVAG--SRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALS 89
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
KI +A G H + V + G + A+G N++GQ G + + P R ++ C
Sbjct: 90 NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA--IPQRC 147
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
V + AG GT + T++ V + P P I ++
Sbjct: 148 APKLIV--------RQVAAG---------GTHSVVLTREGHVWTWGQPWP-PGDITQISV 189
Query: 229 ETIVK-------VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
V+ +A G H +A+ G ++ WG YG+LG + + P V
Sbjct: 190 PVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNL 333
++ I+AG +S+ G++Y WG+ + N+ M P+ + LSG +
Sbjct: 250 TLVD----IAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI 305
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--------LEGM 384
+ G H V +D S+G +G LGYG + ++ P++V I E
Sbjct: 306 VQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGR--KVTTGQPEEVPIDIPPPRGRTENG 363
Query: 385 HVIS--VACGYGHSLVIV 400
H I+ VACG H+L +V
Sbjct: 364 HWIAKLVACGGRHTLALV 381
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 47 PTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R++ G+D +R +A G + H +A+ +G + WG NE GQLG GD R +P V
Sbjct: 190 PVRVQ---GLDMVRLIAVG--AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SE 162
LS + AG H+ +T++G +G +HG+LG G +++ P V+ L E
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE 304
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ +CG +V ++S + + G +G+LG+G T ++ + P PR
Sbjct: 305 IVQISCGGTHSVAVTS--DGRMFSFGRGDHGRLGYG---RKVTTGQPEEVPIDIPP-PRG 358
Query: 223 IAALAGETIVK-VACGTNHTVAV 244
G I K VACG HT+A+
Sbjct: 359 RTE-NGHWIAKLVACGGRHTLAL 380
>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
Length = 1074
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 168/394 (42%), Gaps = 46/394 (11%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---IQRDR----PTIVSEL 107
+I C H + +G Y G N +GQLG GD +Q P +V +L
Sbjct: 113 SFNILIKQISCGDNHSAILTNQGHLYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKL 172
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNS-----LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
YK++ G + T + +D N+ A+G N+ GQLG S+ P+ ++
Sbjct: 173 RDYKVESVECGSNFTFSIVKDSNNQEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDY 232
Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ + G+ +++L+ E + + G GQLG G + A +
Sbjct: 233 NIRIKQISAGSSHSLFLT--EESQVYAVGSNSSGQLGIG---------QQINQAIQ---- 277
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVF 278
P I L + I++++ G +H++ + S G VY G +LG + Q +++ P ++
Sbjct: 278 PIIIDTLVDKVIIQISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITAL 337
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
Q ++ EA + ++ + G+L++WGK G Y P L+ N C S
Sbjct: 338 QNYKIVKIEAKQESAAI-----SNAGELFLWGK----GVFGSYRTPQKILTISNPVCDIS 388
Query: 339 GNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
DS + +WG ++GELG G Q P V L+G V + C G
Sbjct: 389 LGRSLGTALDSKGLLWTWGTNEHGELGVG--DQDPRIHPYPVLTLKGKKVTQIMC--GGK 444
Query: 397 LVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRN 430
V+ NV + + QL + K S+Q+ + R+
Sbjct: 445 FVVALGVNVKKEIPQLKLKKQKDSTQNGMNLQRD 478
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 35/222 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVS 105
PT+L+ +IR S H + + E + Y G N GQLG G +I Q +P I+
Sbjct: 223 PTKLKFFEDYNIRIKQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPIIID 282
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCL----V 160
L I + AG H++ +T G G N+ QLG + N+ P + L +
Sbjct: 283 TLVDKVIIQISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYKI 342
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
++ A E A+I NAG + G G Y T P
Sbjct: 343 VKIEAKQ------------ESAAISNAG--ELFLWGKGVFGSYRT--------------P 374
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ I ++ + ++ G + A+DSKG ++TWG +G LG
Sbjct: 375 QKILTISN-PVCDISLGRSLGTALDSKGLLWTWGTNEHGELG 415
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 160/383 (41%), Gaps = 48/383 (12%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
L +++ P L + +DI +A G H V +G +TWG G+LGHG
Sbjct: 265 LRTDVLLPRPLESNIVLDIHHIACGVR--HAALVTRQGEVFTWGEESGGRLGHGVVKDVI 322
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS--- 154
+P +V L+ I G HT VT G +G H G LG GS + P
Sbjct: 323 QPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVS 382
Query: 155 -PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
P+ L +VT+ CG T ++S+ + G +G LGHG D E ++
Sbjct: 383 GPLEGL--QVTSVTCGPWHTALVTSM--GQLFTFGDGTFGALGHG-DRE--------NIS 429
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLG 262
Y P+ + +L+G + VACG HT AV S G ++TWG G RLG
Sbjct: 430 Y-----PKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLG 484
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDD 318
H +++ P V + V S+ T G M +G+L N D
Sbjct: 485 HGDKEPRLKPTCVPALIDYDF---HKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSAD 541
Query: 319 WMYPKPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
P + D L G ++ + G H V + + +WG G LG+G + + P
Sbjct: 542 GKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKT--PT 599
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
V+ L+ HV +ACG ++ I
Sbjct: 600 LVEALKDRHVKYIACGSNYTAAI 622
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 122/289 (42%), Gaps = 29/289 (10%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLG 91
GR + +++ P + L I FVA C H AV + G YTWG + G LG
Sbjct: 311 GRLGHGVVKDVIQPRMVESLAASSIGFVA--CGEFHTCAVTITGELYTWGDGTHNAGLLG 368
Query: 92 HGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
HG + P VS L ++ G HT +VT G FG G LG G N
Sbjct: 369 HGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENI 428
Query: 151 IEPSPVRCLVSEVT-ATACGADFTVWLSS--VEGASILNAGLPQYGQL---GHGTDNEYN 204
P V L T A ACG VW ++ VE ++ G+L G G N
Sbjct: 429 SYPKEVESLSGLRTIAVACG----VWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLG 484
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
D +L +P + AL KVACG + TV + + G V++ G YG+LG+
Sbjct: 485 HGDKEPRL------KPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGN- 537
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK 311
D +P V+ + L E+V +S G+ + ++Y WGK
Sbjct: 538 PSADGKIPCLVE-----DKLFGESVEEVSCGAYHVVVLTSKNEVYTWGK 581
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
++G ++ Y T + V L PR + + I +ACG H V +G V+TW
Sbjct: 253 KIGAEKNSSYVTLRTDVLL-------PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTW 305
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-- 311
G GRLGH KD PR V+ +++ ++ G ++ G+LY WG
Sbjct: 306 GEESGGRLGHGVVKDVIQPRMVESLAASSI----GFVACGEFHTCAVTITGELYTWGDGT 361
Query: 312 ----LKNNGDD---WMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
L +G D W+ + L G + + G H V + ++G +G LG
Sbjct: 362 HNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALG 421
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G +++ + PK+V+ L G+ I+VACG H+ +V+
Sbjct: 422 HG--DRENISYPKEVESLSGLRTIAVACGVWHTAAVVE 457
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A SA + S+ GG +YMWG+ +
Sbjct: 285 RIVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E ++
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERIV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERIVEIAACHSAHT 297
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 41/364 (11%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P GV ++ G H +A+D EG+ + WG NE GQLG G + P V +
Sbjct: 151 PTPGVVTPQISGGW--SHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT 208
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--NEIEPSPVRCLVSEVTATACG 169
I G H++ + G A+G+N G+LG G+ + + ++++ A + G
Sbjct: 209 ITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAG 268
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
++++ LSS S+L G GQLG+G NT +SV + P + I+A
Sbjct: 269 GEYSIALSS--DGSVLTWGANSDGQLGNG-----NTDQNSVPTKISSLPLMKGISA---- 317
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEA 288
G H++AV G+VY WG G++G+ E+ D V V V ++
Sbjct: 318 -------GEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDI----D 366
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNM 341
+ AG+ S G+++ WG L + G + P + +L+ + + G+
Sbjct: 367 AVCAGATFSLALGIDGRVWAWG-LNDEGQLGDGTNTNSTTPVEVTNLA--KISAVACGSD 423
Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
H + SWG G+LG G +SS+ P +D+ ++ VA G HSL I
Sbjct: 424 HSLAIRNGKVKSWGLNDEGQLGDG--STRSSSAP--LDVTGLSDIVYVAAGESHSLAITS 479
Query: 402 RTNV 405
+ N+
Sbjct: 480 KGNI 483
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 128/314 (40%), Gaps = 87/314 (27%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERG------------------------------- 88
A C H +A+D GR + WG N G
Sbjct: 209 ITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAG 268
Query: 89 ----------------------QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
QLG+G+ Q PT +S L +K AG +H++ VT
Sbjct: 269 GEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLP--LMKGISAGEAHSLAVT 326
Query: 127 EDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGAS 183
EDG A+G N GQ+G+G S N + +PV+ ++++ A GA F++ L ++G
Sbjct: 327 EDGFVYAWGLNDEGQIGNGEKSADNPVL-NPVQVQGLTDIDAVCAGATFSLAL-GIDG-R 383
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ GL GQLG GT+ T LA I VACG++H++A
Sbjct: 384 VWAWGLNDEGQLGDGTNTNSTTPVEVTNLAK----------------ISAVACGSDHSLA 427
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ G V +WG G+LG + P +DV ++++ ++AG +S
Sbjct: 428 I-RNGKVKSWGLNDEGQLGDGSTRSSSAP--LDVTGLSDIV----YVAAGESHSLAITSK 480
Query: 304 GQLYMWGKLKNNGD 317
G +Y+WG NGD
Sbjct: 481 GNIYVWGL---NGD 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 34/207 (16%)
Query: 214 YEAQPRPRAI----AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+ +PRP A G +++ G +H++A+DS+G ++ WG G+LG +
Sbjct: 136 FSPRPRPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQ 195
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM--------- 320
P V + N L + G +S G+++ WG NGD +
Sbjct: 196 TTPVAVQI----NALTTITAVDCGGDHSMALDSLGRVWAWGY---NGDGELGGGTTENNS 248
Query: 321 ------YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
L D+ + G + +D S ++WG G+LG G Q S +
Sbjct: 249 NVPVPVPVPNLTDI----IAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNS--V 302
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVD 401
P K+ L M IS G HSL + +
Sbjct: 303 PTKISSLPLMKGIS--AGEAHSLAVTE 327
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 157/375 (41%), Gaps = 53/375 (14%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ + G H V +G +TWG G+LGHG ++ RP
Sbjct: 238 DVLTPRPLESNVVLDVHQIVCGVR--HVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 295
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ I G HT VV+ G+ ++G H G LG GS + P P+
Sbjct: 296 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ A+ + G +G LGHG
Sbjct: 356 EGL--QVLSVACG----TWHSALATANGKLFTFGDGAFGVLGHGNR-------------- 395
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
E+ P+ + +L G VKVAC HT A+ S ++TWG G RLGH
Sbjct: 396 ESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHG 455
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
++ +P V N I+ G + G ++ G+L N+ D
Sbjct: 456 NKETYLLPTCVSSLIDYNF----HKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDG 511
Query: 320 MYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D L G + + G H + + S +WG G LG+G K + P
Sbjct: 512 KLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRT--PTL 569
Query: 378 VDILEGMHVISVACG 392
V+ L HV S++CG
Sbjct: 570 VEALRDRHVKSLSCG 584
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + ++ CG H V +G V+TWG GRLGH Q D P+ V+
Sbjct: 242 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA 301
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++ G ++ + G L+ WG L +G D W+ + L G
Sbjct: 302 LTNI----DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEG 357
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H A+ ++G +G LG+G ++S + PK+V L G+ + V
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKV 415
Query: 390 ACGYGHSLVIVD 401
AC H+ IV+
Sbjct: 416 ACSIWHTAAIVE 427
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 39/214 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVA-VDVEG---------RCYTWGRNERGQLGHGDKI 96
P ++ L G ++ V C H A V+V G + +TWG ++ +LGHG+K
Sbjct: 401 PKEVQSLNG--LKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKE 458
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
PT VS L Y K G + TV +T G+ G HGQLG N I +
Sbjct: 459 TYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-----NSISDGKL 513
Query: 157 RCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
CLV + V ACGA L+S + + G G+LGHG + T
Sbjct: 514 PCLVQDRLVGEFVEEIACGAHHVAVLTS--RSEVFTWGKGANGRLGHGDTEDKRT----- 566
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + ++CG+N T ++
Sbjct: 567 ---------PTLVEALRDRHVKSLSCGSNFTSSI 591
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSAP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 KVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P V V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ G +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQSGNVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSAPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GV 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHVLVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFG 135
P V + ++ A +HT T+ GN +G
Sbjct: 276 PAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWG 311
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 19/269 (7%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ SP L + ++I+ ++ HC+A+ +G ++WG E G+LGHG++ +P
Sbjct: 1514 TVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPK 1573
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
+ I AG SH+ + +G +G ++G+LG G ++++P V L
Sbjct: 1574 RIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFF 1633
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG+ L ++ + G YG+LG G + P
Sbjct: 1634 FVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG--------------GSDGCKVPM 1679
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I L+G+ IVKV CG+ ++A+ G +YTWG G Y RLGH ++ P V
Sbjct: 1680 IIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK 1739
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V IS GS++ G++Y WG
Sbjct: 1740 IV----TSISCGSLHCVVCTDEGEVYCWG 1764
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 152/336 (45%), Gaps = 41/336 (12%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG N++ QLG G K++ PT+ LS + K G T +T G + G +
Sbjct: 561 FMWGLNDKDQLGGLKGSKVKS--PTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGES 618
Query: 138 KHGQLGSGSIR-NEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G+LG G I N P V + +V++V+ + G + + L+S +G + + G +
Sbjct: 619 SFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHS-GGNHVMALTS-DGLA-FSWGDGEN 675
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLGHG N S +P I A G+ + ++CG+ H+ A+ Y+YT
Sbjct: 676 GQLGHG-----NLMSCS---------KPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYT 721
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS--VNSSCTAGGGQLYMW- 309
WG G +GRLGH +++ P+ V F NV+ +S GS + C +++ W
Sbjct: 722 WGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQ----VSCGSRDAQTVCITDDDKVWSWG 777
Query: 310 ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL G + + P + L G + + G + + +WG + LG
Sbjct: 778 DGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG 837
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G PK V+ L G HVI +A G H L +
Sbjct: 838 HG--TDIHVRQPKLVEGLRGKHVIDIAVGALHCLAV 871
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 54/416 (12%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ V SPT L + +F+A G S + +G+ Y+ G + G+LG GD
Sbjct: 572 GGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITN--KGKLYSCGESSFGKLGIGDIT 629
Query: 97 -QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P +V+ L++ + K +G +H + +T DG + ++G ++GQLG G++ + +P
Sbjct: 630 GNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKP 689
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ V + VT +CG+ + + VE + GL +G+LGHG +
Sbjct: 690 HLIEAFVGKIVTDISCGSAHSA--AIVENKYLYTWGLGDFGRLGHGDE------------ 735
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
E +P+ + G +V+V+CG+ TV + V++WG G +G+LG +
Sbjct: 736 --ETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCL 793
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY--------- 321
+P V+ + + I G+ + G ++ WGK GD +
Sbjct: 794 IPVEVEQLRGLQI----CKILCGAQFTVALTKTGTVWTWGK----GDFYRLGHGTDIHVR 845
Query: 322 -PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
PK + L G ++ + G +H V D SWG +G+LG G K +P +
Sbjct: 846 QPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKK--VPNLIT 903
Query: 380 ILEGMHVISVACGYGHSLVIVDRTNVGERLDQ---LDV-YDGKASS----QDNEEI 427
L + VACG HS+ + T +D+ +V YD A++ ++N+E+
Sbjct: 904 GLHNHRIKYVACGSSHSIAWTEITTSACIIDKPLSFEVNYDPMATNLVKVKENDEV 959
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L CG + + +G G + GN+ SP + L + + V+ H +A+ +G
Sbjct: 610 GKLYSCGESSFGKLG--IGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLA 667
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG E GQLGHG+ + +P ++ + G +H+ + E+ +G
Sbjct: 668 FSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDF 727
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G ++P V + V +CG+ + + + + G +G+LG G
Sbjct: 728 GRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRG 787
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E P + L G I K+ CG TVA+ G V+TWG G +
Sbjct: 788 --------------GSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDF 833
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + +V+ I+ G+++ G+++ WG
Sbjct: 834 YRLGHGTDIHVRQPKLVEGLRGKHVID----IAVGALHCLAVTQDGEVFSWG 881
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ G I + AG H A+ + G YTWG+ G+LGHGD + +P V
Sbjct: 1572 PKRIEFFCGKIITNICAG--GSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEA 1629
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L + + G+G + T+ +T D N ++G +G+LG G P + L + +
Sbjct: 1630 LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGI 1689
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F++ L+ + + G Y +LGHGT+ E RP +
Sbjct: 1690 VKVECGSQFSMALT--KYGVLYTWGKGDYYRLGHGTE--------------EHVRRPMMV 1733
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
AL + + ++CG+ H V +G VY WG G+LG
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG 1772
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 142/349 (40%), Gaps = 43/349 (12%)
Query: 66 VSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHT 122
+ C V + +G + G GQLG G P ++ + IKK +G H
Sbjct: 1482 IDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHC 1541
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
+ ++ DG ++G + G+LG G+ + +P + ++ C S A
Sbjct: 1542 LALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAG------GSHSAA 1595
Query: 183 SILNAGLP-----QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
LN L +YG+LGHG ++ Q +P+ + AL ++ VACG
Sbjct: 1596 IGLNGELYTWGKGRYGRLGHGDSDD--------------QLKPKQVEALQFFFVLDVACG 1641
Query: 238 TN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+ T+ + + V++WG G YG+LG VP ++ ++ E GS
Sbjct: 1642 SGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVE----CGSQ 1697
Query: 296 NSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGADS 349
S G LY WGK +G + +P+M + +N + + G++H V D
Sbjct: 1698 FSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDE 1757
Query: 350 -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
WG G+LG G + + P L + ++CG H++
Sbjct: 1758 GEVYCWGDNDEGQLGDGTIIARQT--PTLNTFLLNKKIDRISCGSAHTI 1804
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC- 236
+ +GA + G GQLG G E PR + ++ I K++
Sbjct: 1490 TTDGALVFATGYGNNGQLGLGYS--------------ETVTSPRLLESIKHINIKKISVH 1535
Query: 237 -GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G H +A+ S G V++WG G G+LGH ++ P+R++ F + I AG
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKII----TNICAGGS 1591
Query: 296 NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVG 346
+S+ G+LY WGK + + DD + PK + L + ++ C +
Sbjct: 1592 HSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCIT 1651
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D + SWG YG+LG G G +P ++ L G ++ V CG S+ +
Sbjct: 1652 NDDNVWSWGDGDYGKLGRG--GSDGCKVPMIIEDLSGKGIVKVECGSQFSMAL 1702
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 52 PLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
P++ D+ V C S +A+ G YTWG+ + +LGHG + RP +V+ L
Sbjct: 1678 PMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALF 1737
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATA 167
+ G H VV T++G +G N GQLG G+I P+ L++ ++ +
Sbjct: 1738 NKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRIS 1797
Query: 168 CGADFTV-WLSS 178
CG+ T+ W +S
Sbjct: 1798 CGSAHTIAWSTS 1809
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 162/380 (42%), Gaps = 47/380 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+++ P L V +D++ +A G H +G + WG G+LGHG RP
Sbjct: 229 ADILIPKPLESDVVLDVQQIACGYR--HIALTTRQGEVFAWGEELGGRLGHGTDADISRP 286
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCL 159
+V L+ ++ G HT +T G+ + G+ G LG G+ + P V
Sbjct: 287 KLVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP 346
Query: 160 VS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ +V + +CG+ W S++ +S + G +G LGHG + +AY
Sbjct: 347 LEGVQVLSVSCGS----WHSALTTSSGKVFTFGDGTFGALGHGNRH---------TVAY- 392
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV----DSKGY------VYTWGFGGYGRLGHRE 265
P+ + L+G +KVACG H+ A+ + G ++TWG G LGH +
Sbjct: 393 ----PKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGD 448
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----GKLKNNGDDWMY 321
+ VP V N V S+ + + G M G+L N D +
Sbjct: 449 KDARLVPTCVQSLIDYNF---HQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKH 505
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P P+ D L+G + + G+ H + + S +WG G LG+G G + P V+
Sbjct: 506 PTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHG--GVEDKKKPTLVE 563
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S+ACG + I
Sbjct: 564 ALKDRHVKSIACGSNFTTCI 583
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACG H +G V+ WG GRLGH D P+ V+
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 293
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
+NV ++ G ++ G LY WG N W+ + L G
Sbjct: 294 VSNV----EYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEG 349
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G + + A PK+V+ L G I V
Sbjct: 350 VQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHG--NRHTVAYPKEVETLSGFRTIKV 407
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ TN
Sbjct: 408 ACGLWHSAAIVETTN 422
>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1387
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 167/405 (41%), Gaps = 66/405 (16%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K E+ GS + +G + N P +I F + C S H + + +G
Sbjct: 95 KYNEIFVFGSNKYGQIGLSEKNAGKNFCIPR----FCHFNIVFTSVSCGSHHSILLTQDG 150
Query: 78 RCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
Y+ G N GQLG D Q + PT++ +L Y I K +G H + +T + ++
Sbjct: 151 YAYSIGSNIYGQLG-ADTNQINYSYTPTLIQKLQDYIITKVVSGAYHNIALTNENQLFSW 209
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G N GQLG + ++ G + + +++ +GL YGQ
Sbjct: 210 GRNNEGQLG--------------LVDKKIVNVFSGWNHSFFITKQNELYSFGSGL--YGQ 253
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G T D K+ Y + + I+K+ACG H++ + +G V+ G
Sbjct: 254 LGQGKCENSITPD---KVLYHEK----------DQKIIKIACGETHSLLLSEQGQVFACG 300
Query: 255 FGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK 311
G+LG R +K P+ + N+ E++ I+ G + + T LY WG+
Sbjct: 301 ENQRGQLGLGRNKKVVLQPQYLS---NENLFASESIIDIACGRFSVAITQKTQSLYAWGQ 357
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSG------NM--HHFVGADSSCI--------SWG 355
+ + +Y L+ ++ G N+ VG DS I SWG
Sbjct: 358 FCDTDSNPIYTPQLV----FSFNSQKEGKEQPEKNLVKKAVVGGDSCIILMKNGDLYSWG 413
Query: 356 HAQYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHSLVI 399
Q+GE G G + KS P ++ L+G V++ G H++V+
Sbjct: 414 KNQFGECGQGDFENKSETFYP--INFLKGKKVLTFHLGEAHTIVL 456
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEA 288
V+CG++H++ + GY Y+ G YG+LG + + P + Q + + +
Sbjct: 133 FTSVSCGSHHSILLTQDGYAYSIGSNIYGQLGADTNQINYSYTPTLIQKLQ--DYIITKV 190
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGA 347
V +G+ ++ QL+ WG+ N G + K +++ SGWN F+
Sbjct: 191 V--SGAYHNIALTNENQLFSWGR-NNEGQLGLVDKKIVNVFSGWN--------HSFFITK 239
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE-GMHVISVACGYGHSLVIVDR 402
+ S+G YG+LG G ++S P KV E +I +ACG HSL++ ++
Sbjct: 240 QNELYSFGSGLYGQLGQGKC--ENSITPDKVLYHEKDQKIIKIACGETHSLLLSEQ 293
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 166/382 (43%), Gaps = 53/382 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ +A G S H +G +TWG G+LGHG RP
Sbjct: 248 DFLIPKPLESDVVLDVQQIACG--SRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 305
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ ++ G HT VVT G+ +G + G LG G+ + P P+
Sbjct: 306 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 365
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG+ W S++ +S + G +G LGHG D E +AY
Sbjct: 366 EGL--QVLSVACGS----WHSALTMSSGKLFTFGDGTFGSLGHG-DRE--------SVAY 410
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHR 264
P+ + AL+G +KVACG H+ A V+ G ++TWG G RLGH
Sbjct: 411 -----PKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHG 465
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
+++ + VP V +N ++ G + A G ++ G+L N D
Sbjct: 466 DKEAKLVPTCVQALVDHNF----HQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADG 521
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D G L S +H + + S +WG G LG+G K P
Sbjct: 522 KQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKK--PTL 579
Query: 378 VDILEGMHVISVACGYGHSLVI 399
VD L+ HV S++CG + I
Sbjct: 580 VDALKDRHVKSISCGSNFTTCI 601
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACG+ H +G V+TWG GRLGH D P+ V+
Sbjct: 252 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLA 311
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
+NV I+ G ++ G LY WG N W+ + L G
Sbjct: 312 VSNV----EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 367
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G ++S A PK+V+ L G + V
Sbjct: 368 LQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHG--DRESVAYPKEVEALSGFRAMKV 425
Query: 390 ACGYGHSLVIVD 401
ACG HS IV+
Sbjct: 426 ACGVWHSAAIVE 437
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 154/369 (41%), Gaps = 42/369 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D + ++ G + + V V +G+ Y+WG G+LGHG P ++ E
Sbjct: 295 PKVLKSHVALDAQSISCG--TNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDE 352
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--- 161
++ A G HT VT G+ A+G H G LG GS + + PVR L
Sbjct: 353 FDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 410
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V +CG T +++S + G +G LGHG N P
Sbjct: 411 INVRTISCGPWHTAFVTS--AGKLFTFGDGTFGALGHGDRISTNI--------------P 454
Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
R + AL G ++ ACG H+ AV S G ++TWG G G+LGH + +P
Sbjct: 455 REVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPL 514
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM-YPKPLMDLSGWN 332
V + ++ G + + GQ+Y G + DD + P + G +
Sbjct: 515 SVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSQDDVVRAPSCIEGGLGKS 570
Query: 333 LRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ HH + + + +WG G+LG+G + MP V L+G V V
Sbjct: 571 FVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRR--MPTLVKALKGKQVRKVV 628
Query: 391 CGYGHSLVI 399
CG ++ I
Sbjct: 629 CGSNYTATI 637
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
D VW S+ G +L G+ + G + + K +A +AQ
Sbjct: 262 DVFVWGESI-GDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQ------------- 307
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
++CGTN+ V V +G +Y+WG GRLGH P+ +D F + V +
Sbjct: 308 --SISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTV----ELA 361
Query: 291 SAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
G ++ G LY WG L + W + L + G N+R + G
Sbjct: 362 DCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPW 421
Query: 342 HH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H FV + ++G +G LG+G + S+ +P++V+ L G I ACG HS +V
Sbjct: 422 HTAFVTSAGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIRTACGVWHSAAVV 479
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 49/276 (17%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---------- 92
N +PT + L I + G H +AV G + WG N GQ+G
Sbjct: 180 NRTAPTPVETLNNQHIIDIGVGL--DHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNS 237
Query: 93 ------GDK--------------IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
G++ ++ PT+V L + KI G T +++ GN
Sbjct: 238 TTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVY 297
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASILNAG 188
+FG N+ G LG GS P + +E + + GA T++L+S G ++ + G
Sbjct: 298 SFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTS--GGNVYSCG 355
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LG G D +DS L Y Q + + IVKVA G +H++A+D +G
Sbjct: 356 WGTEGRLGLGMDTS--NRDSPTLLKYFNQNKIK---------IVKVAAGGSHSMALDDQG 404
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
VYTWG G G+LGH + DE +P++++ F +NV+
Sbjct: 405 RVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVI 440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 153/356 (42%), Gaps = 39/356 (10%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
+ + Y WG N+ G + + Q PT + L ++K GRS T+V+T DG L F
Sbjct: 107 ISNKVYMWGTNKSGNMSLPSE-QYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGF 165
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
G N GQLG G RN P+PV L ++ + G D ++ ++ + + G G
Sbjct: 166 GENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVT--KAGHVFGWGYNVEG 223
Query: 194 QLGHGTDNEYNTKDSSVK------------LAYEAQP-----RPRAIAALAGETIVKVAC 236
Q+G EY +S+ + L + P P + L I V C
Sbjct: 224 QIGQKVV-EYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFC 282
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAVISAGS 294
G + T + ++G VY++G G LG + V P ++ + N + +S+G+
Sbjct: 283 GYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQ---LSSGA 339
Query: 295 VNSSCTAGGGQLYM--WGK-----LKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFV 345
++ GG +Y WG L + + P L + ++ + +G H
Sbjct: 340 SHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMA 399
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
D + +WG+ G+LG+G + +PK+++ +VI + G +SLV++
Sbjct: 400 LDDQGRVYTWGNGSNGKLGHG--NESDENLPKQINFFSHSNVIDIFAGIDNSLVLI 453
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 19 GGELLFCGSTCWDAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
GG + CG W GR +D N SPT L+ I+ V H +A+D +G
Sbjct: 348 GGNVYSCG---WGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQG 404
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
R YTWG G+LGHG++ + P ++ S + AG +++V+ ++
Sbjct: 405 RVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVIDIFAGIDNSLVLIKE 455
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 131/299 (43%), Gaps = 50/299 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
P +R L +I+ V C H +A+ ++WG+N+ GQLG G + ++ P ++
Sbjct: 128 PRNIRSLS--EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIK 185
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
L + AG +H+ V+T G +G NK GQLG + P+ ++ L S+ V
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVV 245
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG D T L+ G AG YGQLGH T +E N PR +
Sbjct: 246 HICCGEDHTAALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKV 288
Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLG-----HREQ----KDEWVPR 273
L G + ++ CG HT A V S G +Y++G GG G+LG +R+ K W+P
Sbjct: 289 FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIP- 347
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCT----AGGGQ---LYMWGKLKNNGDDWMYPKPL 325
P+ +S S C +GG Q Y + + DD+ YP L
Sbjct: 348 ----------FSPQCPMSTDSEECYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG GQLG + R P + LS+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
H++ +++ ++G NK+GQLG G + + P ++ L+ A ++ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT 206
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ GA I G ++GQLG DN+ P + +L + +V + CG
Sbjct: 207 LSGA-IFGWGRNKFGQLGLNDDNDRYV--------------PTLLKSLRSQKVVHICCGE 251
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 140/331 (42%), Gaps = 40/331 (12%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R RP V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G GQLG + P +R L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G +YGQLG G + Y+ Q P+ I +L G ++A G H
Sbjct: 155 GSEVFSWGQNKYGQLGLGYE-------------YKKQTSPQMIKSLLGIPFAQIAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
+ + G ++ WG +G+LG + D +VP + + V+ A+ G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEG 261
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
V + G GQL N+ + P+ + +L G + + G H FV +
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRI 316
Query: 352 ISWGHAQYGELGYG-------PYGQKSSAMP 375
S+G G+LG G P+ K S +P
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVKGSWIP 347
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
GQLG R P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT+ E PR I +L+ IV+VACG H++A+ V++WG
Sbjct: 120 GTE--------------ECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG E K + P+ + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGYEYKKQTSPQMI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V + CG H+ V
Sbjct: 282 EIN--PRKVFELMGSVVTQITCGRQHTTAFV 310
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I EI P + L V CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +A+ RP + AL + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY WG G+LG ++ VPR + ++ ++ G +S + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQ----VACGYYHSLALSKGSEVF 159
Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
WG+ K G + Y P+ + L G + +G H FV S I WG ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG +P + L V+ + CG H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRSQKVVHICCGEDHT 254
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D R PT++
Sbjct: 180 SPQMIKSLLGIPFAQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
CG T G I + GL GQLG GT
Sbjct: 298 QITCGRQHTTAFVPSSG-RIYSFGLGGNGQLGTGT 331
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 30/271 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L DI +A G + H +AV G Y+WG GQLGH + ++ +P +V
Sbjct: 63 LEPKIIEQLCQKDIVQLAYG-MGPHVLAVTDSGELYSWGHGGYGQLGHTSE-EKSKPVLV 120
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
+ K+ + G H++ +TEDG A+G N GQLG G N+ P V + S+ +
Sbjct: 121 --YMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKI 178
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ +CG FTV L++ + + G GQLG +N N + QP R
Sbjct: 179 VSVSCGQSFTVMLTT--DGELYSWGYNGNGQLG--IENNTN----------QLQPV-RVT 223
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+L G+ I K+ CG H + + G +Y+WG YG+LG + VP ++ +
Sbjct: 224 GSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDRW 283
Query: 284 LPPEA----VISAGSVNSSCTAGGGQLYMWG 310
A ISAG S G++YMWG
Sbjct: 284 SDIAAHHYNHISAGVTIS------GKIYMWG 308
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFG 135
G Y G N G LG GD P I+ +L + I + G H + VT+ G ++G
Sbjct: 41 GDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWG 100
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+GQLG S E + PV + + V ACG+ ++ L+ E + G GQ
Sbjct: 101 HGGYGQLGHTS---EEKSKPVLVYMQKKVIQVACGSYHSIALT--EDGEVYAWGSNNCGQ 155
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G N Q P+ ++ + + IV V+CG + TV + + G +Y+WG
Sbjct: 156 LGLGISNN--------------QATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWG 201
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ G G+LG ++ P RV + I G + G+LY WG
Sbjct: 202 YNGNGQLGIENNTNQLQPVRVTGSLFGKFIEK---IVCGMAHVLVLTDIGELYSWG 254
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 38/282 (13%)
Query: 111 KIKKA----GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
K+KKA GAG + +T +G+ A G+N +G LG G + +EP + L ++
Sbjct: 20 KVKKAFVFGGAGNEALLTLT-NGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQ 78
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G V L+ + + + G YGQLGH ++ + + +
Sbjct: 79 LAYGMGPHV-LAVTDSGELYSWGHGGYGQLGH-----------------TSEEKSKPVLV 120
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ +++VACG+ H++A+ G VY WG G+LG ++ P+RV + ++
Sbjct: 121 YMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVS 180
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+S G + G+LY WG ++NN + + L G + +
Sbjct: 181 ----VSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVC 236
Query: 339 GNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
G H V D SWG YG+LG G ++++P ++
Sbjct: 237 GMAHVLVLTDIGELYSWGANSYGQLGLGT--THNTSVPTLIN 276
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 55/182 (30%)
Query: 219 RPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ I L + IV++A G H +AV G +Y+WG GGYG+LGH ++ + V V
Sbjct: 64 EPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSEEKS---KPVLV 120
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
+ + V+ ++ GS +S G++Y
Sbjct: 121 YMQKKVIQ----VACGSYHSIALTEDGEVY------------------------------ 146
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
+WG G+LG G + A PK+V ++ ++SV+CG ++
Sbjct: 147 ---------------AWGSNNCGQLGLGI--SNNQATPKRVSLIPSKKIVSVSCGQSFTV 189
Query: 398 VI 399
++
Sbjct: 190 ML 191
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 18/268 (6%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIV 104
P R+ L + + F+A G S A+ G+ YTWG++ +G+LG G + P +V
Sbjct: 544 PKRIETLAKMSVVFIACGKDST--AALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLV 601
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCL-VSE 162
+LS + + + GR+H T+ +G N GQLG I + + +P + L +
Sbjct: 602 QDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREAN 661
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ + ACG T L S S+++ G +GQLGHG D E T S ++ +
Sbjct: 662 IRSIACGGWHT--LISTNTGSVMSCGKGWHGQLGHG-DYESLTALSKTLPYFK-----KI 713
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ IVKV+ G + A+ +KG ++TWG G +LGH K+E PR V+ F +
Sbjct: 714 VEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIR 773
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V+ +S G + G Y WG
Sbjct: 774 VVD----VSIGDSHMLALDYSGLPYSWG 797
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 31/216 (14%)
Query: 73 VDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
++++G + WG E G+LG+ + + P IV +K G+ HT+ ++ DG
Sbjct: 85 IELQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVV 144
Query: 132 LAFGWNKHGQLGSG----SIRNEI-EPSPVRCL---------VSEVTATACGADFTVWLS 177
L+ G N +GQLG G S + EPS + L ++ + A G ++ L+
Sbjct: 145 LSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALN 204
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ I + G +G+LG G+D + PR +A+L +V +ACG
Sbjct: 205 --DTGKIFSWGSGSWGKLGIGSDANAES--------------PRFVASLQNSKVVHIACG 248
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+HT A+ + G V+TWG G G+LGH+ K+E+ PR
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR 284
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 58/300 (19%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR------PTIVSELSKYKIKK 114
VA GC H +A +G Y WG +RGQLG + + P V L +Y I
Sbjct: 1218 VACGCE--HSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILS 1275
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFT 173
GR H + +T + L++G + GQLG ++ P V+ L CG
Sbjct: 1276 IACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGG--- 1332
Query: 174 VWLSS--VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR------------ 219
W S+ +E IL G YGQLGHG + + L E + R
Sbjct: 1333 -WHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVV 1391
Query: 220 -----------------------------PRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
P +I L G+ I +VA G H++A+ G V
Sbjct: 1392 MVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEV 1451
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++WG +G+LGH D+ P + +R+ + P I+ G S+ + G+++ WG
Sbjct: 1452 WSWGGSPFGQLGHETITDKLAP--TPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWG 1509
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 23/268 (8%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P +R L V I VA C + HC+A+ E R Y WG + G G + P +S
Sbjct: 1685 TPVEIRSLNTVKIMKVA--CGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELS 1742
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVT 164
L+ I AG H+ +++ G+ +G N +GQLG G+ E P+ + L V
Sbjct: 1743 SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVM 1802
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ GA+ + L V ++ GL GQLG G + +T A+
Sbjct: 1803 DVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLT--------------AVD 1848
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNN 282
AL IV +CG HT AV G + TWG G G+LG + KD P ++ +
Sbjct: 1849 ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICND- 1907
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
P + G + + G+LYM G
Sbjct: 1908 ---PMVKVVCGQEVTIVVSEKGELYMAG 1932
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 150/351 (42%), Gaps = 54/351 (15%)
Query: 73 VDVEG--RCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDG 129
VD+EG YTWG G+LGHG P I S S KI + G H++ + DG
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG 1232
Query: 130 NSLAFGWNKHGQLGS------GSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
A+G GQLGS I P PV L + + ACG + L+S
Sbjct: 1233 GVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSER-- 1290
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+L+ G ++GQLG ++N + P+ + AL G K+ CG H+
Sbjct: 1291 QVLSWGAGEFGQLGL----DHNLSKGT----------PQMVKALDGRAPCKILCGGWHSA 1336
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR------------NNVLPPEAVI 290
A+ G + WG YG+LGH + K P RV+ + R N+ L V+
Sbjct: 1337 AILESGKILLWGKNVYGQLGHGDTKSCSAP-RVNQYLRLEGKVRTAGLGANHTL---VVM 1392
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
A V + + GQL + + + P + +L+G N+ + +G+ H +
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKN---VPVSIEELNGKNICQVAAGDQHSLALSVFG 1449
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH----VISVACGYGHS 396
SWG + +G+LG+ K + P +LE V S+ACGY S
Sbjct: 1450 EVWSWGGSPFGQLGHETITDKLAPTP----LLERHKIPPDVKSIACGYTFS 1496
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 171/425 (40%), Gaps = 97/425 (22%)
Query: 45 VSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++PT L R + D++ +A C A+ +G +TWG E G+LGH K+ P+
Sbjct: 1471 LAPTPLLERHKIPPDVKSIA--CGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPS 1528
Query: 103 IVSELSKYKIKKAGAGRSH-----------TVVVTEDGN----------SLAFG------ 135
++ + S ++ + G H T+ +T N S+A G
Sbjct: 1529 LIKDFS--EVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGST 1586
Query: 136 -------------------WNKHG-----------QLGSGSIRNEIEPSPVRCLV-SEVT 164
+HG QLG ++ PS ++ L+ + +
Sbjct: 1587 RSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIV 1646
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ +D + +++ + S+ +G ++G+LG G P P I
Sbjct: 1647 HISANSDMSAFVT--DSGSLYVSGGSEHGRLGLG--------------HMAPAPTPVEIR 1690
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L I+KVACGT H +A+ + VY WG G +G G D P+ + +++
Sbjct: 1691 SLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSII 1750
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
+ AG +S+ + G L+MWGK +NG + + S + +D M
Sbjct: 1751 G----VHAGGFHSAALSQYGDLFMWGK-NSNGQLGLGTTSAAEDSPTKISNLDGVVMDVS 1805
Query: 345 VGADSSCI----------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+GA+ S + + G G+LG G + +S+ VD L+ ++S +CG
Sbjct: 1806 LGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTL--TAVDALDDRQIVSASCGAA 1863
Query: 395 HSLVI 399
H+ +
Sbjct: 1864 HTAAV 1868
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 150/405 (37%), Gaps = 82/405 (20%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKAGAGRSHTV 123
C H A+ G+ WG+N GQLGHGD P + L + K++ AG G +HT+
Sbjct: 1330 CGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTL 1389
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSS 178
VV A G N GQLG + PV + E + A G ++ LS
Sbjct: 1390 VVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVS--IEELNGKNICQVAAGDQHSLALSV 1447
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + G +GQLGH T + KLA P P + +ACG
Sbjct: 1448 F--GEVWSWGGSPFGQLGHETITD--------KLA----PTPLLERHKIPPDVKSIACGY 1493
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR------------------ 280
+ A+ +KG V+TWG G G LGH + + P + F
Sbjct: 1494 TFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKP 1553
Query: 281 --------------NNVLPPEAVISAGSVNSSCTAGG-------------------GQLY 307
+N I+AGSV+ S + G ++
Sbjct: 1554 RMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVF 1613
Query: 308 MW-----GKLKNNGDDWMYPKPLMD--LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
+W G+L G LM L+ + + +M FV S G +++G
Sbjct: 1614 VWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHG 1673
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG G + P ++ L + ++ VACG H L + + V
Sbjct: 1674 RLGLGHMAPAPT--PVEIRSLNTVKIMKVACGTYHCLALTEEKRV 1716
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 144/342 (42%), Gaps = 75/342 (21%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRD-----RPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
+G YT+G+ G+LGHG + R P + L+K + G+ T +T+ G
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573
Query: 131 SLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSEVTA--------TACGAD---FTVWLS 177
+G + G+LG GS + + P V+ L S V AC D F VW
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW-- 631
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G +GQLG + Y P P I +L I +ACG
Sbjct: 632 ----------GSNTFGQLGIPHISSY-------------MPDPYEITSLREANIRSIACG 668
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKD--------EWVPRRVDVFQRNNVLPPEAV 289
HT+ + G V + G G +G+LGH + + + + V+ F + ++
Sbjct: 669 GWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVK---- 724
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM----------YPKPLMDLSGWNLRCMD-S 338
+SAG +S+ G+L+ WGK GD++ YP+ + + +R +D S
Sbjct: 725 VSAGKESSAAITNKGRLFTWGK----GDEYQLGHESSKNEAYPREVEFFA--KIRVVDVS 778
Query: 339 GNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKV 378
H + D S + SWG+ G+LG+G ++ + +P+ +
Sbjct: 779 IGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERET-LPRPI 819
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 170/441 (38%), Gaps = 68/441 (15%)
Query: 50 LRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + +R A + C H + + G+ Y+ G N GQLG GD R PT+V+
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
+ K+ A ++ +T G AFG L I + P L+ V T
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNR--IPRFVAGLPKSDLIIAVART 398
Query: 167 ACGADFTV--------W--LSSVEGASILNAGL---------------------PQYGQL 195
A DF + W SS E +S + P+ G
Sbjct: 399 A-HFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCT 457
Query: 196 GHGTDNEYNTKDSS--VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK---GYV 250
+T SS + + E P + + AL T T S+ GY+
Sbjct: 458 QAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYI 517
Query: 251 YTWGFGGYGRLGH-----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
YT+G G +GRLGH R ++ P+R++ + +V+ I+ G +++ G+
Sbjct: 518 YTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVV----FIACGKDSTAALTDTGK 573
Query: 306 LYMWGKLKN------NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGH 356
+Y WGK +G + P+ + DLS + + G H D WG
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633
Query: 357 AQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVIVDRTNVGERLDQLDV 414
+G+LG P+ SS MP +I L ++ S+ACG H+L+ TN G +
Sbjct: 634 NTFGQLGI-PH--ISSYMPDPYEITSLREANIRSIACGGWHTLI---STNTGSVMSCGKG 687
Query: 415 YDGKASSQDNEEIDRNSTVPP 435
+ G+ D E + S P
Sbjct: 688 WHGQLGHGDYESLTALSKTLP 708
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 109/257 (42%), Gaps = 36/257 (14%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK--------------IKK 114
H + + +G + G N GQLG GD + R T VSE SK K I
Sbjct: 134 HTLFLSADGVVLSCGSNVYGQLGMGDHM-LSRSTPVSEPSKQKSLDKLQAIIQSLNNIVG 192
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
AG H++ + + G ++G G+LG GS N P V L S+V ACGA T
Sbjct: 193 IAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHT 252
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+++V GL GQLGH SVK + PR A+L K
Sbjct: 253 AAITTVGDVWTWGKGL--RGQLGH----------KSVKEEFS----PRLNASLRKCGAQK 296
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ CG +HT+ + G +Y+ G +G+LG + D +P V F V+ I A
Sbjct: 297 IRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVID----IDAK 352
Query: 294 SVNSSCTAGGGQLYMWG 310
S G+++ +G
Sbjct: 353 GCRSIALTNTGKVFAFG 369
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+G+LGHG EY + SVK P+ I LA ++V +ACG + T A+ G VY
Sbjct: 525 FGRLGHGV--EYTRSEESVK-------HPKRIETLAKMSVVFIACGKDSTAALTDTGKVY 575
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMW 309
TWG G+LG K P + V Q L V IS G +++C+ + ++W
Sbjct: 576 TWGKSAQGKLGLGSGK----PLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW 631
Query: 310 -----GKLKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGE 361
G+L P P + L N+R + G H + ++ S +S G +G+
Sbjct: 632 GSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQ 691
Query: 362 LGYGPY---GQKSSAMPKKVDILEGM---HVISVACGYGHSLVIVDR 402
LG+G Y S +P I+EG ++ V+ G S I ++
Sbjct: 692 LGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 151/404 (37%), Gaps = 54/404 (13%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ GS W +G D N SP + L + +A C + H A+ G
Sbjct: 207 GKIFSWGSGSWGKLGIGS---DANAESPRFVASLQNSKVVHIA--CGAHHTAAITTVGDV 261
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+TWG+ RGQLGH + P + + L K +K G HT+V+ G + G N H
Sbjct: 262 WTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTH 321
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQLG G + I P+ V +E + A C ++ N G +
Sbjct: 322 GQLGLGDATDRIIPTLVTGFANEKVIDIDAKGC-----------RSIALTNTG--KVFAF 368
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA-GETIVKVACGTNHTVAVDSKGYVYTW- 253
G+ T+ N PR +A L + I+ VA + A+ G ++ W
Sbjct: 369 GNETEPHLNRI-------------PRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWR 415
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYMW 309
F + + V +F +N + PE + ++ + +
Sbjct: 416 PFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISR 475
Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-----DSSCISWGHAQYGELGY 364
L+ + + P G N +D + D ++G +G LG+
Sbjct: 476 ASLEKFPSEKILPA-----LGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGH 530
Query: 365 G---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G ++S PK+++ L M V+ +ACG + + D V
Sbjct: 531 GVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGN--LVSPTRLRPLVGV--------DIRFVAAGCVSCH 69
G +L CGS + +G L + + P++ + L + +I +AAG H
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYY--H 199
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
+A++ G+ ++WG G+LG G + P V+ L K+ G HT +T G
Sbjct: 200 SLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVG 259
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEP----SPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
+ +G GQLG S++ E P S +C ++ CG D T L + +
Sbjct: 260 DVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIR---CGDDHT--LVILRSGQLY 314
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G +GQLG G D++ ++ P + A E ++ + ++A+
Sbjct: 315 SMGANTHGQLGLG--------DATDRII------PTLVTGFANEKVIDIDAKGCRSIALT 360
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+ G V+ +G E +PR V +++++ A + S T GQ
Sbjct: 361 NTGKVFAFG-------NETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDT---GQ 410
Query: 306 LYMW 309
L+ W
Sbjct: 411 LFRW 414
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP+ ++ L+ I ++A S V G Y G +E G+LG G P +
Sbjct: 1633 SPSLMQSLLATSIVHISAN--SDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIR 1690
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ KI K G H + +TE+ A+G K G G + + +EP + L
Sbjct: 1691 SLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSL------ 1744
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRA 222
AC + V +A L QYG L G ++ + +S A+ P
Sbjct: 1745 AACS------IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA-----AEDSPTK 1793
Query: 223 IAALAGETIVKVACGTNHTVAVD--SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
I+ L G ++ V+ G NH+ + + ++T G G+LG + D VD
Sbjct: 1794 ISNLDG-VVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDD 1852
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
++ S G+ +++ + G L WG +N
Sbjct: 1853 RQIVSA----SCGAAHTAAVSQYGDLITWGNGRN 1882
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
+ V ++ + ++YTWG G GRLGH P+ + F N + ++ G +S
Sbjct: 1171 YEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKI---VEVACGCEHSLA 1227
Query: 300 TAGGGQLYMW--------GKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+ G +Y W G L+N + P+P+++L + + + G H+ +
Sbjct: 1228 RSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLT 1287
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++ +SWG ++G+LG S P+ V L+G + CG HS I++
Sbjct: 1288 SERQVLSWGAGEFGQLGLDH--NLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 131 SLAFGWN--KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
S F W ++G+LG+ S + P V + V A G T++LS+ +L+
Sbjct: 90 SHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSA--DGVVLSC 147
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YGQLG G + S ++ + +AI + IV +A G H++A++
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQ-SLNNIVGIAAGYYHSLALNDT 206
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G +++WG G +G+LG + PR V Q + V+ I+ G+ +++ G ++
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVH----IACGAHHTAAITTVGDVW 262
Query: 308 MWGK 311
WGK
Sbjct: 263 TWGK 266
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+ +GR +TWG+ + QLGH P V +K ++ G SH + + G
Sbjct: 734 AITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLP 793
Query: 132 LAFGWNKHGQLGSGSI-RNEIEPSPV 156
++G GQLG G + E P P+
Sbjct: 794 YSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTA 301
+V+ WG G G+LG++ ++ + VP V F RN ++ A+ +SA V SC +
Sbjct: 91 HVFMWGDGENGKLGNQSEEIQHVPYIVPAF-RNVLVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 302 G-GGQLYMWGKLKNNGDDWMYP---KPLMDLSGW-----NLRCMDSGNMHHFVGADSSCI 352
GQL M + + P K L L N+ + +G H D+ I
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209
Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
SWG +G+LG G S P+ V L+ V+ +ACG H+ I T VG+
Sbjct: 210 FSWGSGSWGKLGIGSDANAES--PRFVASLQNSKVVHIACGAHHTAAI---TTVGD 260
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIV 104
IR V H +A+D G Y+WG GQLGHG+ +R+ RP ++
Sbjct: 772 IRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIML 821
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 167/409 (40%), Gaps = 62/409 (15%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG D +L P L P + G ++R++ C H AV +G +TWG N+ GQL
Sbjct: 34 RKGK-DRHLRIPKSLPPKLFKCRDGENLRWIDIACGREHTAAVASDGSLFTWGANDFGQL 92
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
G G + P V+ + +K G T + E DG S + W GS
Sbjct: 93 GDGTEESAKEPKKVNAIETEFVKSVSCGAHCTAAIAEPRENDGTISKSRLWVWGQNQGSD 152
Query: 146 SIR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
R P+ V + +CGA + LS E + G +YGQLG G +E
Sbjct: 153 YPRLFWGAFAPNTV------ILQVSCGAVHVMALS--EDGVLQAWGYNEYGQLGRGCTSE 204
Query: 203 YNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ + V AY P + IV+V+CG H A+ G VYTWG G G+
Sbjct: 205 -GLQGARVLNAYARFLDDAPELV------KIVRVSCGEYHAAAISEHGEVYTWGLGSMGQ 257
Query: 261 LGHREQKD---EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
LGHR + E +PRRV + +S G V+S GG LY WG
Sbjct: 258 LGHRSLQSGDKELIPRRVVALEGM----VAGDVSCGGVHSCAVTEGGTLYAWGGGHVGQL 313
Query: 311 ---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYG 360
NG D + + + +R + G+ H + D WG+ YG
Sbjct: 314 GLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGRIYGWGYNSYG 373
Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
+ +KS+ P VD G V +A G GHS V+ D +++ E
Sbjct: 374 QAA----NEKSTYAWYPSPVDWCVG-EVRRLAAGGGHSAVLTDASSLKE 417
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 35/331 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ +V+ L YK++ AG +++ + +DG +GWN+ G
Sbjct: 10 WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
LG + E PS V+ L V+ V A G L+ + G +YGQ G
Sbjct: 70 LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHC---LAVDDQGRAYAWGGNEYGQCG-- 124
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E KD + K P+ A + +VA G H+V + +G+V+TWG
Sbjct: 125 --EEPERKDDTGKTLRRDIVIPQRCAPKL--VVRQVAAGGTHSVVLTREGHVWTWG---- 176
Query: 259 GRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
W P +++ V R L +I+ G+ ++ G L+ WG +
Sbjct: 177 ---------QPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 314 --NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
GD P P+ LSG L + +G H + D WG ++G LG+G
Sbjct: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 287
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ S +P+KV++L G ++ ++CG HS+ +
Sbjct: 288 KSSKMVPQKVNLLAGEDIVQLSCGGTHSVAL 318
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 45/279 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
P++++ L V+I A G HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 82 PSQVKALNNVNIVQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRR 139
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSPV 156
D K +++ AG +H+VV+T +G+ +G W G I+ P V
Sbjct: 140 DIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP------PGDIKQISVPVRV 193
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ L +V A GA L+ E ++ G +YGQLG G +
Sbjct: 194 QGL-EKVKLIAVGAFHN--LALQEDGTLWAWGNNEYGQLGTG----------------DT 234
Query: 217 QPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVP 272
QPR P + L+G T+V +A G H+ A+ G VY WG G +GRLG ++ + VP
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 294
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++V++ +++ +S G +S G+++ +G+
Sbjct: 295 QKVNLLAGEDIVQ----LSCGGTHSVALTQDGRMFSFGR 329
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 31/249 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++V P R P + V R VAAG H V + EG +TWG+ GD Q P
Sbjct: 140 DIVIPQRCAPKLVV--RQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPV 191
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
V L K K+ GA H + + EDG A+G N++GQLG+G + +P PV+ L +
Sbjct: 192 RVQGLEKVKLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ V A G T + + + G ++G+LG G DN D S K+ P
Sbjct: 250 TLVDIAAGGWHST---ALTDDGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------P 294
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ + LAGE IV+++CG H+VA+ G ++++G G +GRLG+ ++ P V
Sbjct: 295 QKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVP---- 350
Query: 281 NNVLPPEAV 289
++ PP+++
Sbjct: 351 TDIPPPKSL 359
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 161/376 (42%), Gaps = 61/376 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAG 116
+R V AG S + +A+ +G+ +TWG N+RG LGH + + + P+ V L+ I +A
Sbjct: 40 VRSVVAG--SRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAA 97
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGS---------GSIRNEIEPSPVRCLVSEVT-AT 166
G H + V + G + A+G N++GQ G ++R +I P RC V
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIV-IPQRCAPKLVVRQV 156
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G +V L+ EG + G P + K SV P + L
Sbjct: 157 AAGGTHSVVLTR-EG-HVWTWGQPW---------PPGDIKQISV---------PVRVQGL 196
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E + +A G H +A+ G ++ WG YG+LG + + P V ++
Sbjct: 197 --EKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD- 253
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
I+AG +S+ G++Y WG+ + N+ M P+ + L+G ++ +
Sbjct: 254 ---IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSC 310
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI-----LEGM-----HVI 387
G H + D S+G +G LGYG + DI L G H I
Sbjct: 311 GGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWI 370
Query: 388 S--VACGYGHSLVIVD 401
+ VACG H+L IV+
Sbjct: 371 AKLVACGGRHTLAIVE 386
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L ++ +A G + H +A+ +G + WG NE GQLG GD R +P V
Sbjct: 190 PVRVQGLE--KVKLIAVG--AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQG 245
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
LS + AG H+ +T+DG +G +HG+LG G +++ P V L E +
Sbjct: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 305
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ + + + G +G+LG+G + T V++ + P P+++
Sbjct: 306 VQLSCGGTHSVALT--QDGRMFSFGRGDHGRLGYG---KKVTTGQPVEVPTDIPP-PKSL 359
Query: 224 AAL---AGETIVK-VACGTNHTVAV 244
+ G I K VACG HT+A+
Sbjct: 360 SGTEEAEGHWIAKLVACGGRHTLAI 384
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 66/468 (14%)
Query: 36 RKGALDGNLVSPTRLRP-LVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG D L P +L P L G ++ R++ C H AV +G +TWG N+ GQL
Sbjct: 34 RKGK-DHQLRVPRQLHPDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWGANDFGQL 92
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
G G + + P V++L +K G T + E DG S W GS
Sbjct: 93 GDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTCRLWIWGQNQGSN 152
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE--- 202
R + ++ +V+ CGA V LS + + G +YGQLG G +E
Sbjct: 153 FPRLFWGAFTPQTIIRQVS---CGAVHVVALS--DDGQLQAWGYNEYGQLGRGVTSEGLQ 207
Query: 203 -YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
++ K EA P + TI KV+CG H+ A+ G VYTWG G G+L
Sbjct: 208 GARIINAFAKFLDEA---PELV------TITKVSCGEYHSAAISENGEVYTWGLGSMGQL 258
Query: 262 GH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------- 311
GH + E +PRRV V I+ G V++ G LY WG
Sbjct: 259 GHCSLQSADKELIPRRVVALDGICVKD----IACGGVHTCAITQNGSLYAWGGGQVGQLG 314
Query: 312 ----------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYG 360
+ + + ++ P++ +S ++ + G+ H V D WG+ YG
Sbjct: 315 VGPQTGFFSCIAGDSETFLRNLPVVVVSD-GVQHVACGHSHTLVSTKDGRIHGWGYNSYG 373
Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGK 418
+ +KS+ P VD G V +A G GHS V+ D ++ E L + + D
Sbjct: 374 QAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKE-LCEFRLAD-T 426
Query: 419 ASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSD 466
+SQ+ EI+ ++ A++ + R+ D E EE+E S+
Sbjct: 427 VNSQNASEIEDVASRTGSDALARLCG--RLRESVLDGRCEFEEDETSN 472
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTE 127
H VA G Y+WG N QLG+G Q P I L KI + G H++V+T+
Sbjct: 90 HVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD 149
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASIL 185
G A+G+N GQ+GSG+ N P V ++ V + ACG T L+ V+ +
Sbjct: 150 RGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQ--TSSLAVVDSGEVY 207
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLG G N N QP P +++L G I + ACG H++A+
Sbjct: 208 GWGYNGNGQLGLG--NNVN------------QPSPCKVSSLNGLIISQAACGYAHSMALS 253
Query: 246 SKGYVYTWGFGGYGRLGHREQKD--------EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+G +YTWG YG+LG + + E + R +D+ + A ISA +
Sbjct: 254 DEGNIYTWGANSYGQLGTGNKANLCGAAKIGESIGRFIDIAATH-----YAHISAAMTQT 308
Query: 298 SCTAGGGQLYMWGKLK 313
G++YMWG+ +
Sbjct: 309 ------GKVYMWGQCR 318
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 65/291 (22%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G+ + + VT+D AFG N + LG G + + + P + L + + A A G+ V
Sbjct: 32 GSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHV 91
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+++ E I + G Y QLG+GT N+ P R L I ++
Sbjct: 92 -VAATENGEIYSWGHNGYCQLGNGTTNQ------------GLLPH-RITGNLGSCKISQI 137
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++ + +G V+ WG+ G++G + PR+V +VL + V+S
Sbjct: 138 ACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVV-----SVLGGKRVVSIAC 192
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
+S +L +DSG ++ W
Sbjct: 193 GQTS---------------------------------SLAVVDSGEVY----------GW 209
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+ G+LG G + S P KV L G+ + ACGY HS+ + D N+
Sbjct: 210 GYNGNGQLGLGNNVNQPS--PCKVSSLNGLIISQAACGYAHSMALSDEGNI 258
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
N+ +P ++ ++G R V+ C +AV G Y WG N GQLG G+ + + P
Sbjct: 170 ANISTPRKVVSVLGGK-RVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSP 228
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
VS L+ I +A G +H++ ++++GN +G N +GQLG+G+ N
Sbjct: 229 CKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKAN 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHT 122
C S H + + G + WG N GQ+G G P +VS L ++ G++ +
Sbjct: 138 ACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSS 197
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEG 181
+ V + G +G+N +GQLG G+ N+ P V L + + ACG ++ LS EG
Sbjct: 198 LAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSD-EG 256
Query: 182 ASILNAGLPQYGQLGHG 198
+I G YGQLG G
Sbjct: 257 -NIYTWGANSYGQLGTG 272
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 156/381 (40%), Gaps = 48/381 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+L+ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 266 ADLLLPKPLESNVVLDVHHIACGVR--HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----P 155
+V L+ + G HT VT G +G H G LG G+ + P P
Sbjct: 324 RLVESLAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGP 383
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ L +V + CG T +++ + G +G LGHG + +AY
Sbjct: 384 LEGL--QVASVTCGPWHTALVTTTR--QLFTFGDGTFGVLGHGDKD---------NVAY- 429
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHR 264
PR + +L+G + VACG HT AV S G ++TWG G RLGH
Sbjct: 430 ----PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 485
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
+++ P V N + V S+ T G M +G+L N D
Sbjct: 486 DKEPRLKPTCVPALIEYNF---QKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGK 542
Query: 321 YPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D L G + + G H + + + +WG G LG+G + + P V
Sbjct: 543 LPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKT--PTLV 600
Query: 379 DILEGMHVISVACGYGHSLVI 399
+ L+ HV +ACG ++ I
Sbjct: 601 ETLKDRHVKYIACGSNYTAAI 621
>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Sarcophilus harrisii]
Length = 612
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 144/360 (40%), Gaps = 68/360 (18%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+WG N GQLG G K P +++ K +K G H+ VVT++G G NK
Sbjct: 192 LSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNK 251
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G + + P L V +CG DFT+ L+ E +L+ G +GQLG
Sbjct: 252 DGQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLT--ENGQVLSCGSNSFGQLG- 308
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ + Q P+ I L E +V +A G H +A G V+ WG G
Sbjct: 309 ------------LPPGTKRQVIPQVI-ELLNEKVVCIAAGMRHALAATESGLVFQWGT-G 354
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLK 313
G R ++ +P + + V E + AGS +S+ G+LY+WG K
Sbjct: 355 LASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNK 414
Query: 314 NN---GDDWMYPKP-------------LMDLSGWNLRCMDSGNMHHFVGADSS--CISWG 355
+ P P M SGW H V + +WG
Sbjct: 415 HGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWT----------HLVARTETGKVFTWG 464
Query: 356 HAQYGELGYGPYGQKS---------------SAMPKKVDILEGMHVISVACGYGHSLVIV 400
A YG+LG GQ+ + MP + LEG V +ACG H+L +V
Sbjct: 465 RADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEHNLAVV 522
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 142/357 (39%), Gaps = 44/357 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V EG + G N+ GQLG G + L+ + + G T+++TE+
Sbjct: 234 HSAVVTDEGELFVCGLNKDGQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTEN 293
Query: 129 GNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G L+ G N GQLG + ++ P + L +V A G L++ E +
Sbjct: 294 GQVLSCGSNSFGQLGLPPGTKRQVIPQVIELLNEKVVCIAAGMRHA--LAATESGLVF-- 349
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
Q+G G + + ++ A+ P + L + V G+ H+ ++ +
Sbjct: 350 ---QWGT-GLASTGRRTCPEKTLPPFLTAK-EPCQVTGLENSKVKTVVAGSCHSASLTDE 404
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G +Y WG +G+L P++++ FQ V ++ +G + G+
Sbjct: 405 GELYVWGSNKHGQLLSPAAFLP-TPQKIEAHCFQNEKV----TMVWSGWTHLVARTETGK 459
Query: 306 LYMWGKL-------------KNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMH 342
++ WG+ + GD + P L L G + M G+ H
Sbjct: 460 VFTWGRADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEH 517
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ SSC SWG ++G G G + + +PK V+ + V CG GHSL +
Sbjct: 518 NLAVVGSSCYSWGWNEHGMCGDG--TEVNVWVPKPVESPSLALCLLVGCGAGHSLAV 572
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 116/271 (42%), Gaps = 26/271 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++L CGS + +G G V P + L+ + +AAG H +A G
Sbjct: 294 GQVLSCGSNSFGQLGLPPGT--KRQVIPQVIE-LLNEKVVCIAAGMR--HALAATESGLV 348
Query: 80 YTWG-------RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ WG R + + P V+ L K+K AG H+ +T++G
Sbjct: 349 FQWGTGLASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELY 408
Query: 133 AFGWNKHGQLGSGSIRNEIEPSP----VRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+G NKHGQL S + P+P C +E T + +T ++ E + G
Sbjct: 409 VWGSNKHGQLLSPA---AFLPTPQKIEAHCFQNE-KVTMVWSGWTHLVARTETGKVFTWG 464
Query: 189 LPQYGQLGHGTD-NEYNTKDSSVKLAY--EAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
YGQLG D E T D + L+ P ++ L G + ++ACG+ H +AV
Sbjct: 465 RADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEHNLAVV 522
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
Y+WG+ +G G + + WVP+ V+
Sbjct: 523 GSS-CYSWGWNEHGMCGDGTEVNVWVPKPVE 552
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 30/265 (11%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
RP++ + C + H VA+ G Y+WG E G+LGHG+ R+ P + L ++
Sbjct: 296 RPIIHI-------ACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRH 348
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATA 167
+I+ G SHT VV++ FG ++G+LG G + P V +
Sbjct: 349 RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVV 408
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG +FT+ L S+EG + + G GQ G G + + P I L
Sbjct: 409 CGWNFTIAL-SLEG-RVFSWGKQSEGQCGLG-------------FCDQDELSPCLIEKLL 453
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD--VFQRNNVLP 285
IV VACG H++A+ S+ V +WG G YG+LG R + P +D +F P
Sbjct: 454 DNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLG-RGIVYQPSPESIDQSLFACEGGHP 512
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
I G+ +S TAG LY WG
Sbjct: 513 QR--IYCGAFHSIITAGSKILYAWG 535
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 27/240 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L+ I +V+ G H V + +T+GR G+LG GD D P V
Sbjct: 339 PRKIMALLRHRIEYVSCG--GSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPT 396
Query: 107 --LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPV-RCLVSE 162
K +I K G + T+ ++ +G ++G GQ G G ++E+ P + + L +
Sbjct: 397 WGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNR 456
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP-- 220
+ ACG ++ L+S +L+ GL +YGQLG G + Y+ P
Sbjct: 457 IVDVACGYTHSLALTSQH--EVLSWGLGEYGQLGRG-------------IVYQPSPESID 501
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVF 278
+++ A G ++ CG H++ +Y WG YG LGH +D +P R D F
Sbjct: 502 QSLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRD--IPERNDFF 559
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 30/254 (11%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG + ++LSS G + D+ +T + + L +
Sbjct: 242 IAEIACGGNHILYLSSA-------------GDVYSSEDHAISTTEPTNMLQTPQLVKELT 288
Query: 223 I-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ AL I+ +ACG H+VA+ S G VY+WG G GRLGH E +D VPR++ R+
Sbjct: 289 LEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRH 348
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLR--- 334
+ +S G +++ + ++ +G+ +N GD + P ++ W R
Sbjct: 349 RI----EYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP-QEVPTWGFRKQR 403
Query: 335 ---CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ N + + SWG G+ G G + + P ++ L ++ VAC
Sbjct: 404 IIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLG-FCDQDELSPCLIEKLLDNRIVDVAC 462
Query: 392 GYGHSLVIVDRTNV 405
GY HSL + + V
Sbjct: 463 GYTHSLALTSQHEV 476
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 180/441 (40%), Gaps = 51/441 (11%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+L++P ++ L G I +A G H + + G Y+ + + +Q P
Sbjct: 226 NSLLTPQKVDVLPGQSIAEIACG--GNHILYLSSAGDVYSSEDHAISTTEPTNMLQT--P 281
Query: 102 TIVSELSKYK------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+V EL+ K I G H+V +T G ++G + G+LG G +R+ P
Sbjct: 282 QLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRK 341
Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ L+ + +CG T +S + + G + G+LG G ++T
Sbjct: 342 IMALLRHRIEYVSCGGSHTAVVS--DQNLVFTFGRGRNGRLGLGDTKCHDT--------- 390
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVP 272
P+ + I+KV CG N T+A+ +G V++WG G+ LG +Q DE P
Sbjct: 391 ---PQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQ-DELSP 446
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--GKLKNNGDDWMY-PKP----- 324
++ N ++ ++ G +S ++ W G+ G +Y P P
Sbjct: 447 CLIEKLLDNRIVD----VACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQ 502
Query: 325 -LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
L G + + + G H + A S + +WG YG G G + +P++ D
Sbjct: 503 SLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRD--IPERNDFFA 560
Query: 383 GMHV-ISVACGYGHSLVI-VDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAA 440
+ + + CG+ +++ + VD+ D ASS N ++ P A
Sbjct: 561 NIDTDVVLCCGHKYTIALEVDKVP-SVSADSFGNTFENASSSSNLHMEN----PFSNWEA 615
Query: 441 KVSNNSKKRKKSKDSSEEEEE 461
+VS+ S + + K EEE
Sbjct: 616 RVSSVSSEVLERKSLHHREEE 636
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 22/268 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I+ ++ G H + + +G Y+WG N QLG+G+ IQ P +
Sbjct: 63 IMPRRLDVLCGKKIKDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
EL K+ K G H++ +T DG ++G+N GQ+GSG+ N+ P V +
Sbjct: 122 CMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSK 181
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A T ++ + + G GQLG G NT + Q P +
Sbjct: 182 VVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I++V G H++A+ +G +Y WG +G+LG + ++ VP +V +R
Sbjct: 228 VFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 284
Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
V + S N S+ + GQ+YMWG
Sbjct: 285 --MVEVAACHSTNISAAKSQSGQVYMWG 310
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + T++ FG N LG+G ++ I P + L ++ + G+ +
Sbjct: 28 GSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHI 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + +G + + G Y QLG+G + T V++ E L + ++KV
Sbjct: 88 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIKV 133
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++A+ S G V++WG+ G++G ++ VPR+V ++ V+ I+AG
Sbjct: 134 ACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVS---IAAGQ 190
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S G +Y WG L N G+ M P L+ + + G H +
Sbjct: 191 TSSMAITDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPVCIIQVVLGYAHSLALS 249
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D + +WG +G+LG G + + +P KV E M
Sbjct: 250 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 285
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 39/339 (11%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSH 121
C H + G Y+ G N +GQLG + + PT+V L YK + G H
Sbjct: 74 ACGEEHTSFIAQNGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYH 133
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T V ++G +G N GQLG G N P V + +CG T+ ++ +
Sbjct: 134 TATVCDNGQLFTWGQNCEGQLGIGKSDNMTTPQIVDLKNNLAVFVSCGKRNTMVITQTQ- 192
Query: 182 ASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
I G + GQLG G + NEY +PR + + + IV ++CG H
Sbjct: 193 -KIFGFGDGKCGQLGLGNECNEY---------------KPRQL-QIQMQNIVAISCGDRH 235
Query: 241 TVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
T+ ++ +G ++ G Y +LG + +P +V ++ + L VI+A + S+
Sbjct: 236 TLFLNEEGEAFSCGNNTYNQLGCANNSQSSNIPVKV---KQKSTLKFVKVIAANTPMSAA 292
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLS-GWNLRCMDSGNMHHFVGADSSCIS 353
+ G LY+W G+ PK L+D+ G C+ G + S
Sbjct: 293 LSSEGYLYLWGTGFFGQFDRPTRCEFAPKDLLDICIGNQFICLLDG--------EGKVYS 344
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
WG +GELG G + + P +VD ++ +V + CG
Sbjct: 345 WGSNMFGELGQGIANGQQALEPIQVDKIKDKNVKRLYCG 383
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 35/298 (11%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ G S + VT++ FG N LG+G ++ + P + L ++ + + G
Sbjct: 23 KVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG 82
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ V LS+ +G + G Y QLG+GT N+ + L +
Sbjct: 83 SGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIK 128
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V N L + V
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-----TNCLHIKRV 183
Query: 290 --ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
I+ G +S G++Y WG L NNG+ + P + L + + G
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGY 242
Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
H D + +WG YG+LG G K++ + ++E V+ + AC H+
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVEIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 159/388 (40%), Gaps = 56/388 (14%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
LD L P L V +D+ +A G H V V +G ++WG G+LGHG +
Sbjct: 276 LDALL--PKALESTVVLDVHGIACG--GRHAVLVTRQGEIFSWGEESGGRLGHGVEADVS 331
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVR 157
P I+ LS ++ G HT VT G+ +G H G LG GS + P V
Sbjct: 332 HPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVS 391
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V+ +CGA T ++S + G +G LGHG N
Sbjct: 392 GQMEGIRVSYISCGAWHTAVVTS--AGQLFTFGDGSFGALGHGDHITSNF---------- 439
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV---------------DSKGYVYTWGFGGYGR 260
PR + L G KVACG HT A S +YTWG G GR
Sbjct: 440 ----PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGR 495
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMWGKLK 313
LGH + + VP V + A+ +AG V + + GQL G
Sbjct: 496 LGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL---GSAT 552
Query: 314 NNGDDWMYPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKS 371
NG P + +++ + + G+ H + + + +WG G+LG+G ++
Sbjct: 553 ANGK---LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRN 609
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P VD+L+ V +VACG ++VI
Sbjct: 610 T--PTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 166/382 (43%), Gaps = 53/382 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ +A G S H +G +TWG G+LGHG RP
Sbjct: 262 DFLIPKPLESDVVLDVQQIACG--SRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 319
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ ++ G HT VVT G+ +G + G LG G+ + P P+
Sbjct: 320 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 379
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG+ W S++ +S + G +G LGHG D E +AY
Sbjct: 380 EGL--QVLSVACGS----WHSALTMSSGKLFTFGDGTFGSLGHG-DRE--------SVAY 424
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHR 264
P+ + AL+G +KVACG H+ A V+ G ++TWG G RLGH
Sbjct: 425 -----PKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHG 479
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
+++ + VP V +N ++ G + A G ++ G+L N D
Sbjct: 480 DKEAKLVPTCVQALVDHNF----HQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADG 535
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D G L S +H + + S +WG G LG+G K P
Sbjct: 536 KQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKK--PTL 593
Query: 378 VDILEGMHVISVACGYGHSLVI 399
VD L+ HV S++CG + I
Sbjct: 594 VDALKDRHVKSISCGSNFTTCI 615
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACG+ H +G V+TWG GRLGH D P+ V+
Sbjct: 266 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLA 325
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
+NV I+ G ++ G LY WG N W+ + L G
Sbjct: 326 VSNV----EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 381
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G ++S A PK+V+ L G + V
Sbjct: 382 LQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHG--DRESVAYPKEVEALSGFRAMKV 439
Query: 390 ACGYGHSLVIVD 401
ACG HS IV+
Sbjct: 440 ACGVWHSAAIVE 451
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L K+ + G H++ + DG A+G+N GQ+GSGS N+ P V CL
Sbjct: 122 CTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+D FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GV 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 156/383 (40%), Gaps = 47/383 (12%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
++ + + P L V +D++ ++ G H V +G Y+WG G+LGHG
Sbjct: 294 VNMDCLIPKPLEFAVKLDVQNISCG--GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP 351
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVR 157
+P ++ L+ I+ G HT VT G+ + G + G LG G+ + P V
Sbjct: 352 QPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVN 411
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V+A +CG T ++S + G +G LGHG +
Sbjct: 412 GPLEGIHVSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV---------- 459
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGH 263
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH
Sbjct: 460 ----PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH 515
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDD 318
++ VP V V P I+ G + G +Y ++G+L N D
Sbjct: 516 GDKDTRLVPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQAD 571
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
M P + N S +H + + + +WG G LG+G +SS P
Sbjct: 572 GMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PT 629
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
V+ L+ V +V CG + I
Sbjct: 630 LVEALKDKQVRTVVCGINFTAAI 652
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 361 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 416
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 474
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 475 ACGVWHTAAVVE 486
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 177/426 (41%), Gaps = 73/426 (17%)
Query: 12 EETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAG------C 65
EE ++KGGE+ W G L + L L+ + RF +AG C
Sbjct: 2 EENERDKGGEV-----EIWSWGAGTDGQLGTTRLEDEHLPQLLDLP-RFSSAGPISLLAC 55
Query: 66 VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
H +A+ +G+ TWGR GQLGHGD + +P V L + + AG SH+ V
Sbjct: 56 GGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFV 115
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASI 184
++ G G GQLG G ++ P V S+ V ACG ++ L ++G +
Sbjct: 116 SDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVL--LKGDQV 173
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G + GQLG D NT+ SV P+A L G I+ + +H+ A+
Sbjct: 174 YGFGSGKRGQLGVSMD---NTRSISV---------PQATVGLEGVEIISIDANGDHSAAL 221
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV---ISAGSVNSSCTA 301
+ G++YTWG G+G D PR LP ++ G +
Sbjct: 222 SANGHLYTWGR-GFG-----STSDVHCPR---------CLPSSLCFTQVALGWNHMLVLT 266
Query: 302 GGGQLYMWGKLKNN--GD-------------DWMYPKP----------LMDLSGWNLRCM 336
GGG+++M G ++ GD + P + L G N+ +
Sbjct: 267 GGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQGLDGLNVVQI 326
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMH-VISVACGY 393
+G H + ++ I +WG ++G+LG G Y Q S + L G H +I V CG
Sbjct: 327 AAGAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGS 386
Query: 394 GHSLVI 399
G + I
Sbjct: 387 GFTFAI 392
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+++WG G G+LG +DE +P+ +D+ R + P ++++ G + G++ W
Sbjct: 14 IWSWGAGTDGQLGTTRLEDEHLPQLLDL-PRFSSAGPISLLACGGAHVLALTTDGKVVTW 72
Query: 310 GKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G+ + +GD + PK + L + + + +G H +D+ C+ + G +G+L
Sbjct: 73 GRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQL 132
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G KS P KV + HV +ACG HSLV++
Sbjct: 133 GHGDC--KSHCSPVKVSYFDSKHVDQIACGMRHSLVLL 168
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LV 160
V L + + AG H+ +VTE+ +GW +HGQLG G+ ++I P VR L
Sbjct: 315 VQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLP 374
Query: 161 SEVTA--TACGADFTVWLSSV 179
+ T CG+ FT + +V
Sbjct: 375 GQHTMIKVYCGSGFTFAIKAV 395
>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
Length = 1061
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 121/283 (42%), Gaps = 49/283 (17%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ ++AG H VA+ G YTWG G+LGH D I + +++
Sbjct: 178 PCKVDSLGGSFIKLISAG--KFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++ GA + H V+ T+ G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S + A A T +S + + G + GQLG+GT N +
Sbjct: 296 RSRIVAVAAANKHTAVVSDL--GEVFTWGCNREGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + +L G+T+ +V+ HT+ + S G V+TW GHR P+RV V
Sbjct: 342 PRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTW--------GHRLV----TPKRVVVSR 389
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
F R L I+AG V+S G L+ W
Sbjct: 390 NLKRSGSTLLKFHRKERL-SVVSIAAGMVHSMALTDDGALFYW 431
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 27/244 (11%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L IK AG+ H+V +T G +
Sbjct: 152 VATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ + G+LG I P V + A GA + + +G + G
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFTWG 271
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ GQLG+ + + QP PR +++L IV VA HT V G
Sbjct: 272 SNREGQLGYPS--------------VDTQPTPRRVSSLRSR-IVAVAAANKHTAVVSDLG 316
Query: 249 YVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V+TWG G+LG+ + PR V+ + + +SA ++ G++
Sbjct: 317 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTL----TRVSAAKYHTIVLGSDGEV 372
Query: 307 YMWG 310
+ WG
Sbjct: 373 FTWG 376
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GT+ + T ++ + Q P + +L G I ++ G H+VA+ ++G VYTWGF
Sbjct: 160 GSGTNYQLGTGNAHI------QKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGF 213
Query: 256 GGYGRLGHRE------QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG--GGQLY 307
G GRLGH + Q PR+V + L V++ G+ GG+++
Sbjct: 214 GRGGRLGHPDFDIHSGQAAVITPRQV-----TSGLGSRRVMAIGAAKHHMVIATQGGEVF 268
Query: 308 MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYG 360
WG + + D P+ + L + + + N H V +D +WG + G
Sbjct: 269 TWGSNREGQLGYPSVDTQPTPRRVSSLRS-RIVAVAAANKHTAVVSDLGEVFTWGCNREG 327
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LGYG S+ P+ V+ L+G + V+ H++V+
Sbjct: 328 QLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVL 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 35/299 (11%)
Query: 118 GRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G H+ V TE F W + QLG+G+ + P V L S + + G +V
Sbjct: 146 GNDHSSVATE-----VFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSV 200
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ + G + G+LGH D + A PR + + L ++
Sbjct: 201 ALTA--RGEVYTWGFGRGGRLGH--------PDFDIHSGQAAVITPRQVTSGLGSRRVMA 250
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ +H V G V+TWG G+LG+ + PRRV + V ++A
Sbjct: 251 IGAAKHHMVIATQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSLRSRIV-----AVAAA 305
Query: 294 SVNSSCTAGGGQLYMWG-----KL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
+ +++ + G+++ WG +L +N P+ + L G L + + H V
Sbjct: 306 NKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIV 365
Query: 346 -GADSSCISWGH--AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+D +WGH + ++S + K E + V+S+A G HS+ + D
Sbjct: 366 LGSDGEVFTWGHRLVTPKRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTD 424
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 156/380 (41%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ C H V +G Y+WG G+LGHG P
Sbjct: 300 DCLVPKPLEFAVRLDVQNIS--CGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPK 357
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ L+ I+ G HT VT G+ + G K G LG G+ + P + +
Sbjct: 358 LIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG TV ++S + G +G LGHG E+
Sbjct: 418 EGIHVSSISCGPFHTVIVTS--AGQLFTFGDGSFGVLGHGDR--------------ESLS 461
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
P+ + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 462 VPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 521
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+ VP V V P ++ G + G +Y ++G+L N D M
Sbjct: 522 ESRLVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGML 577
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G K++ P V+
Sbjct: 578 PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNT--PTLVE 635
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V +V CG + I
Sbjct: 636 ALKDKQVRNVVCGTNFTAAI 655
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 304 PKPLEFAVRLD--VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDA 361
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ K L
Sbjct: 362 LTHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G ++S ++PK+V+ L+G+ +
Sbjct: 418 EGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG--DRESLSVPKEVESLKGLRTV 475
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 476 RAACGVWHTAAVVE 489
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 136/326 (41%), Gaps = 34/326 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG G I R+ P VS + G SH++ +T G LA+G N GQ
Sbjct: 62 WGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQ 121
Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
LG+G+ N P V L + T A A L+ ++L G GQLG+G
Sbjct: 122 LGTGNNLNSSVPITV-ALPPDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNG--- 177
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
NT +S+ + P G T+ +A GTNH++A+ S G WG G G+L
Sbjct: 178 --NTFNSNTPVTVNLPP---------GTTVATIAAGTNHSLAITSTGAALAWGGNGNGQL 226
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWGKLKN---- 314
G+ P V LPP I+ AGS S G WG N
Sbjct: 227 GNNSTATSLEPIAVT-------LPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLG 279
Query: 315 --NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
N D + P + G + + +G H V + + ++WG G+LG G +
Sbjct: 280 TGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIG--TTTN 337
Query: 372 SAMPKKVDILEGMHVISVACGYGHSL 397
S P V++ + + G+ HSL
Sbjct: 338 SDTPVIVNLPPDTTITTNDGGFFHSL 363
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 141/347 (40%), Gaps = 44/347 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G WG N GQLG G+ + P V+ + A H++ +T
Sbjct: 101 HSLALTSAGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTSA 160
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-ACGADFTVWLSSVEGASILNA 187
G LA+G N GQLG+G+ N P V AT A G + ++ ++S A
Sbjct: 161 GAVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITSTGAA----- 215
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
L G + ++S + E P A+ TI +A G+++++A+ S
Sbjct: 216 -------LAWGGNGNGQLGNNSTATSLE----PIAVTLPPSTTITAIAAGSSYSLAITST 264
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGG 304
G WG G+LG D +P V LPP I+ AG +S G
Sbjct: 265 GTALAWGGNSNGQLGTGNNADSLIPIAV-------ALPPGTTITSIAAGFTHSLAVTSTG 317
Query: 305 QLYMWG---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CIS 353
WG N D + +++L + G H +G+ S+ ++
Sbjct: 318 TALAWGGNSRGQLGIGTTTNSDTPV----IVNLPPDTTITTNDGGFFHSLGSMSTGAALA 373
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
WG+ G+LG G +S P V + G + ++A G GHSL +V
Sbjct: 374 WGNNFSGQLGTG--NNTNSLDPIAVALPSGTKITTIAAGGGHSLALV 418
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G N GQLG GS P V + VTA A G ++ L+S ++L G
Sbjct: 60 LAWGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTS--AGAVLAWGEN 117
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG G N +SSV + P T+V +A H++A+ S G V
Sbjct: 118 NFGQLGTG-----NNLNSSVPITVALPPD---------TTVVAIAASHGHSLALTSAGAV 163
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP---EAVISAGSVNSSCTAGGGQLY 307
WG G+LG+ + P V+ LPP A I+AG+ +S G
Sbjct: 164 LAWGANNVGQLGNGNTFNSNTPVTVN-------LPPGTTVATIAAGTNHSLAITSTGAAL 216
Query: 308 MW------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
W N+ + P + + + +G+ + + + + ++WG G
Sbjct: 217 AWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNG 276
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG G S +P V + G + S+A G+ HSL +
Sbjct: 277 QLGTG--NNADSLIPIAVALPPGTTITSIAAGFTHSLAV 313
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G I +AAG H +AV G WG N RGQLG G D P IV+ I
Sbjct: 297 GTTITSIAAGF--THSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLPPDTTITT 354
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
G H++ G +LA+G N GQLG+G+ N ++P
Sbjct: 355 NDGGFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDP 393
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 94/350 (26%), Positives = 147/350 (42%), Gaps = 40/350 (11%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNE-----RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
C S + A+ G Y WGR LG+G + PT V LS+ + G
Sbjct: 631 CGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVL--VSIGY 688
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
H+ + +G L +G + GQLG G + N+ P V+ + S VT CG T+ L+
Sbjct: 689 YHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLT- 747
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + G +YGQLG G D + N P + +L I+++ACG+
Sbjct: 748 -KNGKVFTWGTSEYGQLGLG-DTQKNCT-------------PMLVTSLEKYNIIQIACGS 792
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H + + V +G G +G VP V + N+ +S G +++
Sbjct: 793 THCAVLTNAREVLVFGNGA--AMGSANIIS--VPMMVPALKHLNI----ERLSCGHYSTA 844
Query: 299 CTAGGGQLYMWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-S 353
G +Y WG + G ++PK + L ++R + G H DS I +
Sbjct: 845 ALTECGDVYTWGSGQELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYT 904
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
G +G+LG+ Q PKK+D L ISV+CG H+ + D T
Sbjct: 905 CGKDPFGQLGHA---QGDQNKPKKIDSLLKTTFISVSCGENHNASLFDTT 951
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG-----YGRLGHREQKDE 269
++Q P + I ++CG+ ++ A+ G VY WG G LG+ +D+
Sbjct: 610 QSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQ 669
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPK 323
+P +V+ L ++S G +S+ G+L WG ++ +GD + PK
Sbjct: 670 LLPTKVE------SLSEVVLVSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPK 723
Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ ++ + + G H + + +WG ++YG+LG G + + P V LE
Sbjct: 724 VVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLG--DTQKNCTPMLVTSLE 781
Query: 383 GMHVISVACGYGHSLVIVDRTNV 405
++I +ACG H V+ + V
Sbjct: 782 KYNIIQIACGSTHCAVLTNAREV 804
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAG 116
+ V C HC+A+ G YTWG NE GQLG G +PT+V+ L I
Sbjct: 138 MLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIA 197
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVW 175
G H+ VV++ G +G N GQLG S + P+ ++ + +V A G DF+V+
Sbjct: 198 CGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 257
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ G AG+ YGQLGHG ++ + PR + L G T+ +V
Sbjct: 258 LTYDGGVFTCGAGM--YGQLGHG--------------SFSNEIVPRKVLELMGSTVTQVT 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG HT+ V SKG VY++G G G+LG + + P+ V
Sbjct: 302 CGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 342
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 147/333 (44%), Gaps = 35/333 (10%)
Query: 80 YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG G+LG G + IV+ S IK G +HT+ VTEDG A G
Sbjct: 2 YCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS 61
Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N GQLG R +++ P V LV +T+ ACG ++ L+ E + G GQL
Sbjct: 62 NDFGQLGHDGCRTKLQKIPGVESLV--MTSVACGEAHSMALN--EWGQLYTWGSDSCGQL 117
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G TD Q +P+ + LA +V+++CG H +A+ + G +YTWG
Sbjct: 118 GLETDEG-------------IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 164
Query: 256 GGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
+G+LG P V+ V P + I+ G +S + G ++ WGK
Sbjct: 165 NEFGQLGLGLGPGNVSKPTLVNSL----VGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 220
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
N+ P L + ++ + G + F+ D + G YG+LG+G +
Sbjct: 221 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 280
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+KV L G V V CG H+L +V
Sbjct: 281 SNE--IVPRKVLELMGSTVTQVTCGRRHTLTLV 311
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ PT + LVG+ I F+A G H V G + WG+N+ GQLG + P
Sbjct: 178 NVSKPTLVNSLVGLPISFIACG--GYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPA 235
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+ + K+K G +V +T DG G +GQLG GS NEI P V L+ S
Sbjct: 236 QLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGS 295
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VT CG T+ L +G + + GL GQL GT + N+ + L P
Sbjct: 296 TVTQVTCGRRHTLTLVPSKG-RVYSFGLGSVGQL--GTKSSINSNTPQLVLGPWLSP--- 349
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-------------EQKD 268
+G ++++ TN V S +Y G + R+ H+ E
Sbjct: 350 -----SGTSMIE----TNKQYVVKS---IYAGGDQCFVRVTHKSLDICPDDYRIIQESSQ 397
Query: 269 EWVPRRVDVFQRNNVLPPEAV 289
W + DV + +LP V
Sbjct: 398 IWTVKLSDVINLSTILPENPV 418
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAG 116
+ V C HC+A+ G YTWG NE GQLG G +PT+V+ L I
Sbjct: 157 MLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIA 216
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVW 175
G H+ VV++ G +G N GQLG S + P+ ++ + +V A G DF+V+
Sbjct: 217 CGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 276
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ G AG+ YGQLGHG ++ + PR + L G T+ +V
Sbjct: 277 LTYDGGVFTCGAGM--YGQLGHG--------------SFSNEIVPRKVLELMGSTVTQVT 320
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG HT+ V SKG VY++G G G+LG + + P+ V
Sbjct: 321 CGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 361
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 147/333 (44%), Gaps = 35/333 (10%)
Query: 80 YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG G+LG G + IV+ S IK G +HT+ VTEDG A G
Sbjct: 21 YCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS 80
Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N GQLG R +++ P V LV +T+ ACG ++ L+ E + G GQL
Sbjct: 81 NDFGQLGHDGCRTKLQKIPGVESLV--MTSVACGEAHSMALN--EWGQLYTWGSDSCGQL 136
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G TD Q +P+ + LA +V+++CG H +A+ + G +YTWG
Sbjct: 137 GLETDEG-------------IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 183
Query: 256 GGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
+G+LG P V+ V P + I+ G +S + G ++ WGK
Sbjct: 184 NEFGQLGLGLGPGNVSKPTLVNSL----VGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 239
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
N+ P L + ++ + G + F+ D + G YG+LG+G +
Sbjct: 240 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 299
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+KV L G V V CG H+L +V
Sbjct: 300 SNE--IVPRKVLELMGSTVTQVTCGRRHTLTLV 330
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ PT + LVG+ I F+A G H V G + WG+N+ GQLG + P
Sbjct: 197 NVSKPTLVNSLVGLPISFIACG--GYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPA 254
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
+ + K+K G +V +T DG G +GQLG GS NEI P V L+ S
Sbjct: 255 QLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGS 314
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
VT CG T+ L +G + + GL GQL GT + N+ + L P
Sbjct: 315 TVTQVTCGRRHTLTLVPSKG-RVYSFGLGSVGQL--GTKSSINSNTPQLVLGPWLSP--- 368
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-------------EQKD 268
+G ++++ TN V S +Y G + R+ H+ E
Sbjct: 369 -----SGTSMIE----TNKQYVVKS---IYAGGDQCFVRVTHKSLDICPDDYRIIQESSQ 416
Query: 269 EWVPRRVDVFQRNNVLPPEAV 289
W + DV + +LP V
Sbjct: 417 IWTVKLSDVINLSTILPENPV 437
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 65/179 (36%), Gaps = 59/179 (32%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEWVPRRVDVFQRNNVLPPEA 288
I VACG NHT+AV G +Y G +G+LGH K + +P + +
Sbjct: 56 IKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTS------- 108
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
++ G +S GQLY W G+D
Sbjct: 109 -VACGEAHSMALNEWGQLYTW------------------------------------GSD 131
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
S G+LG + PK V L M ++ ++CGY H + + TN GE
Sbjct: 132 SC---------GQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYKHCMAL---TNHGE 177
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 166/388 (42%), Gaps = 52/388 (13%)
Query: 30 WDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
+D +G + A ++++P L V +D+ + G H V +G +TWG + G
Sbjct: 234 FDGLGSQLQAFCKTDVLTPKPLESDVVLDVHQIGPG--DRHIALVTRQGEVFTWGEDSGG 291
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ--LGSGS 146
+LGHG + RP +V L+ + G H+ V+ G+ +G HG LG G+
Sbjct: 292 RLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGT 351
Query: 147 IRNEIEPS----PVRCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTD 200
+ P P+ L +V A ACG W S++ ++ + G ++G LGHG
Sbjct: 352 DVSYWIPKRVSGPLEGL--QVVAVACGT----WHSALATSNGKLFTFGDGRFGVLGHG-- 403
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYV 250
+ +AY P+ + L+G +KVACG H+ A+ S +
Sbjct: 404 -------NRASVAY-----PKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRL 451
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
+TWG G RLGH ++ P V N V ++ + TA G M
Sbjct: 452 FTWGDGDQYRLGHANKETYLEPTCVAAVAEYNF---HQVACGYTMTVALTASGHVFSMGG 508
Query: 309 --WGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGY 364
+G+L N D P + D L G + + G H + + S +WG G LG+
Sbjct: 509 TTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGH 568
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACG 392
G K S P V+ L+ HV +++CG
Sbjct: 569 GDTDDKKS--PTLVEALKDRHVKNISCG 594
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 40/276 (14%)
Query: 47 PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R+ PL G+ + VA C + H G+ +T+G G LGHG++ P V
Sbjct: 358 PKRVSGPLEGLQV--VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQ 415
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLA---------FGWNKHGQ--LGSGSIRNEIEPS 154
LS YK K G H+ + D L+ F W Q LG + +EP+
Sbjct: 416 LLSGYKAIKVACGVWHSAAII-DVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPT 474
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V + ACG TV L++ + + G YGQLG+ D V +
Sbjct: 475 CVAAVAEYNFHQVACGYTMTVALTA--SGHVFSMGGTTYGQLGNPNS------DGKVPIL 526
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+ L GE + +++CG NH + S+ +YTWG G GRLGH + D+ P
Sbjct: 527 VRDK--------LVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPT 578
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+ + +V IS GS +SC L+ W
Sbjct: 579 LVEALKDRHV----KNISCGSTFTSCIC----LHKW 606
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ G H V +G V+TWG GRLGH +KD P V+
Sbjct: 252 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLA 311
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
NV ++ G +S + G L+ WG L +G D W+ + L G
Sbjct: 312 ITNV----TFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 367
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H ++ ++G ++G LG+G + S A PK+V +L G I V
Sbjct: 368 LQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHG--NRASVAYPKEVQLLSGYKAIKV 425
Query: 390 ACGYGHSLVIVDRTNV 405
ACG HS I+D ++
Sbjct: 426 ACGVWHSAAIIDVMDL 441
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 22/268 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I+ ++ G H + + +G Y+WG N QLG+G+ IQ P +
Sbjct: 133 IMPRRLDVLCGKKIKDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 191
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
EL K+ K G H++ +T DG ++G+N GQ+GSG+ N+ P V +
Sbjct: 192 CMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSK 251
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A T ++ + + G GQLG G NT + Q P +
Sbjct: 252 VVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 297
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I++V G H++A+ +G +Y WG +G+LG + ++ VP +V +R
Sbjct: 298 VFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNERM-- 355
Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
V + S N S+ + GQ+YMWG
Sbjct: 356 ---VEVAACHSTNISAAKSQSGQVYMWG 380
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G+ + + T++ FG N LG+G ++ I P + L ++ + G+ +
Sbjct: 98 GSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHI 157
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + +G + + G Y QLG+G + T V++ E L + ++KV
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIKV 203
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++A+ S G V++WG+ G++G ++ VPR+V ++ V+ I+AG
Sbjct: 204 ACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVV---VSIAAGQ 260
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S G +Y WG L N G+ M P L+ + + G H +
Sbjct: 261 TSSMAITDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPVCIIQVVLGYAHSLALS 319
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D + +WG +G+LG G + + +P KV E M
Sbjct: 320 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 355
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + LS KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+D FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 37/255 (14%)
Query: 74 DVEGRCYTWGRNERGQLGH-------GDKIQRDR---------PTIVSELSKYKIKKAGA 117
+ GR YT G +RG+LG+ G++ ++ P IV+ KI +
Sbjct: 114 EASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISC 173
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVW 175
G +H++ +++ G A+G ++G LG+G + + P + ++ V A GA +
Sbjct: 174 GANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHS-- 231
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L E + G G+LG G +Y + P I +L+ I VA
Sbjct: 232 LCCNEDGQVFAWGSNSNGRLGTGG-------------SYGMKTVPTQIKSLSQYHITLVA 278
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G +H+ +DS GY+YTWG GG G+LGH Q D +PRR++ P ++ G+
Sbjct: 279 AGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISS----LPFVQLTLGAF 334
Query: 296 NSSCTAGGGQLYMWG 310
NS + G++Y+WG
Sbjct: 335 NSMALSQSGEVYIWG 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 43/274 (15%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-----PTIVSELSKYK----IKK 114
C + H + + G + WG N+ GQLG + ++ + + ++E ++ K I++
Sbjct: 494 ACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRR 553
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTA------- 165
G H++ GN ++G GQLG+G+IRN EP+ + L V EV
Sbjct: 554 VACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSAC 613
Query: 166 -TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
AC L ++ + G G+LG G D +K A PR +
Sbjct: 614 IVACITTGNKDLDTINSGDLWIWGDGDLGKLGLG--------DHVLKSCIAA---PRHLN 662
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
G I+KVA G++HT+A+ + G + TWG G YGRLG K P ++
Sbjct: 663 L--GTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-------F 713
Query: 285 PPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN 314
P + V I+ GS +S + G L++WGK +N
Sbjct: 714 PIKGVQIVDIAVGSYHSMAVSSLGDLWVWGKAEN 747
Score = 85.9 bits (211), Expect = 6e-14, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 41/320 (12%)
Query: 107 LSKYKIKKAGAGRSHTVVVTE---DGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
L + +A + +H +V + G A+G N + LG G E P V +
Sbjct: 34 LGGHSFTRAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93
Query: 162 EVTATACGADFT-VWLSSVEGAS--ILNAGLPQYGQLGHGTD-----NEYNTKDSSVKLA 213
EV +CG T V + + AS + GL G+LG+ NE++ D +
Sbjct: 94 EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWY 153
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P P + I +++CG NH++A+ G V+ WG G YG LG E D + P
Sbjct: 154 ---TPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPV 210
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM--YPKPLM 326
+++ + + I+AG+ +S C GQ++ W G+L G M P +
Sbjct: 211 KIEAGPTDKKV---LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIK 267
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVD 379
LS +++ + +G H S CI +WG+ G+LG+G Q +P++++
Sbjct: 268 SLSQYHITLVAAGESH------SGCIDSFGYIYTWGNGGSGKLGHGT--QSDCNIPRRIE 319
Query: 380 ILEGMHVISVACGYGHSLVI 399
+ + + + G +S+ +
Sbjct: 320 GISSLPFVQLTLGAFNSMAL 339
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 45/263 (17%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG T+ L V G +I G +YGQLG T ++D ++ +P
Sbjct: 490 VRQIACGTSHTLLL--VYGGTIFAWGDNKYGQLGIDTRRR-KSQDGDKNESFLNEPTEIK 546
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ E I +VACG+ H++ D KG ++WG G G+LG ++ + P + + N
Sbjct: 547 FS----EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK--N 600
Query: 283 VLPPEAVISAGSVNSSC-------------TAGGGQLYMWGKLKNNGD-------DWMYP 322
V+ ++ G + S+C T G L++WG +GD D +
Sbjct: 601 VIE----VAGGELYSACIVACITTGNKDLDTINSGDLWIWG----DGDLGKLGLGDHVLK 652
Query: 323 KPLMDLSGWNLRC----MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ NL + G+ H + A I+WG YG LG KS + P K
Sbjct: 653 SCIAAPRHLNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTN--STKSHSNPIK 710
Query: 378 VDI-LEGMHVISVACGYGHSLVI 399
+ ++G+ ++ +A G HS+ +
Sbjct: 711 IRFPIKGVQIVDIAVGSYHSMAV 733
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 88/376 (23%), Positives = 140/376 (37%), Gaps = 76/376 (20%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
+AAG + H + + +G+ + WG N G+LG G + PT + LS+Y I AG
Sbjct: 224 IAAG--ARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
SH+ + G +G G+LG G T + C +
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGHG------------------TQSDCNIP-----RRI 318
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-----PRAIAALAGETIVKV 234
EG S LP + QL G N S + A+ P I A I +
Sbjct: 319 EGIS----SLP-FVQLTLGAFNSMALSQSGEVYIWGAKQHEIISLPTKIDAFDSH-ICHI 372
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-------DEWVPRRVDVFQRNNVLPP- 286
G + A+D + +Y W RL +K +E + +R++ +N VL P
Sbjct: 373 NSGPYISFAMDVRHNIYLWN----NRLLVNSKKSEALNANEEQLYKRMN--SKNPVLLPF 426
Query: 287 --------EAVISAG---------SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
+ + G V+ + GG + K+NG + +
Sbjct: 427 FQSKAFVDDCIFYMGFNLVDYKGNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP 486
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS-------SAMPKKVDIL 381
W++R + G H + I +WG +YG+LG +KS S + + +I
Sbjct: 487 SWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIK 546
Query: 382 EGMHVISVACGYGHSL 397
+ VACG HSL
Sbjct: 547 FSEPIRRVACGSWHSL 562
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLP-- 285
++ ++ACGT+HT+ + G ++ WG YG+LG R +K + + +
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFS 548
Query: 286 -PEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYP-------KPLMDLSGWN 332
P ++ GS +S C G + WG+ L +Y K +++++G
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGE 608
Query: 333 L------RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS-AMPKKVDILEGMH 385
L C+ +GN WG G+LG G + KS A P+ +++ G
Sbjct: 609 LYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNL--GTP 666
Query: 386 VISVACGYGHSLVI 399
+I VA G H+L +
Sbjct: 667 IIKVALGSSHTLAL 680
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--------NEI---EP 153
S++ + +++ G SHT+++ G A+G NK+GQLG + R NE EP
Sbjct: 483 SQIPSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEP 542
Query: 154 SPVRCLVSEVTATACGADFTVWLS---SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+ ++ + ACG+ W S ++G + + G GQLG G V
Sbjct: 543 TEIK-FSEPIRRVACGS----WHSLCCDIKG-NCFSWGRGDRGQLGTGAIRNLYEPAGIV 596
Query: 211 KLAYEAQPRPRAIAALAGE--TIVKVACGTNHTVAVDS--KGYVYTWGFGGYGRLG---H 263
L I GE + VAC T +D+ G ++ WG G G+LG H
Sbjct: 597 TLK-------NVIEVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDH 649
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ PR + N+ P ++ GS ++ G+L WG
Sbjct: 650 VLKSCIAAPRHL------NLGTPIIKVALGSSHTLALTASGELITWG 690
Score = 46.2 bits (108), Expect = 0.048, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+++ L I VAAG H +D G YTWG G+LGHG + + P +
Sbjct: 263 PTQIKSLSQYHITLVAAG--ESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEG 320
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+S + G +++ +++ G +G +H
Sbjct: 321 ISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQH 353
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 37/255 (14%)
Query: 74 DVEGRCYTWGRNERGQLGH-------GDKIQRDR---------PTIVSELSKYKIKKAGA 117
+ GR YT G +RG+LG+ G++ ++ P IV+ KI +
Sbjct: 114 EASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISC 173
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVW 175
G +H++ +++ G A+G ++G LG+G + + P + ++ V A GA +
Sbjct: 174 GANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHS-- 231
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L E + G G+LG G +Y + P I +L+ I VA
Sbjct: 232 LCCNEDGQVFAWGSNSNGRLGTGG-------------SYGMKTVPTQIKSLSQYHITLVA 278
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G +H+ +DS GY+YTWG GG G+LGH Q D +PRR++ P ++ G+
Sbjct: 279 AGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISS----LPFVQLTLGAF 334
Query: 296 NSSCTAGGGQLYMWG 310
NS + G++Y+WG
Sbjct: 335 NSMALSQSGEVYIWG 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 47/276 (17%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLG---------HGDKIQR--DRPTIVSELSKYKI 112
C + H + + G + WG N+ GQLG +GDK + + PT + + S+ I
Sbjct: 494 ACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEI-KFSE-PI 551
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTA----- 165
++ G H++ GN ++G GQLG+G+IRN EP+ + L V EV
Sbjct: 552 RRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYS 611
Query: 166 ---TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
AC L ++ + G G+LG G D +K A PR
Sbjct: 612 ACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLG--------DHVLKSCIAA---PRH 660
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ G I+KVA G++HT+ + + G + TWG G YGRLG K P ++
Sbjct: 661 LNL--GTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIR------ 712
Query: 283 VLPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN 314
P + V I+ GS +S + G L++WGK +N
Sbjct: 713 -FPIKGVQIVDIAVGSYHSMAVSSLGDLWVWGKAEN 747
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 41/320 (12%)
Query: 107 LSKYKIKKAGAGRSHTVVVTE---DGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
L + +A + +H +V + G A+G N + LG G E P V +
Sbjct: 34 LGGHSFTRAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93
Query: 162 EVTATACGADFT-VWLSSVEGAS--ILNAGLPQYGQLGHGTD-----NEYNTKDSSVKLA 213
EV +CG T V + + AS + GL G+LG+ NE++ D +
Sbjct: 94 EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWY 153
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P P + I +++CG NH++A+ G V+ WG G YG LG E D + P
Sbjct: 154 ---TPVPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPV 210
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM--YPKPLM 326
+++ + + I+AG+ +S C GQ++ W G+L G M P +
Sbjct: 211 KIEAGPTDKKV---LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIK 267
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVD 379
LS +++ + +G H S CI +WG+ G+LG+G Q +P++++
Sbjct: 268 SLSQYHITLVAAGESH------SGCIDSFGYIYTWGNGGSGKLGHGT--QSDCNIPRRIE 319
Query: 380 ILEGMHVISVACGYGHSLVI 399
+ + + + G +S+ +
Sbjct: 320 GISSLPFVQLTLGAFNSMAL 339
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 45/263 (17%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V ACG T+ L V G +I G +YGQLG T +++ ++ +P
Sbjct: 490 VRQIACGTSHTLLL--VYGGTIFAWGDNKYGQLGVDTRRR-KSQNGDKNESFLNEPTEIK 546
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ E I +VACG+ H++ D KG ++WG G G+LG ++ + P + + N
Sbjct: 547 FS----EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK--N 600
Query: 283 VLPPEAVISAGSVNSSC-------------TAGGGQLYMWGKLKNNGD-------DWMYP 322
V+ ++ G + S+C T G L++WG +GD D +
Sbjct: 601 VIE----VAGGELYSACIVACITTGNKDLDTINSGDLWIWG----DGDLGKLGLGDHVLK 652
Query: 323 KPLMDLSGWNLRC----MDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ NL + G+ H V A I+WG YG LG KS + P K
Sbjct: 653 SCIAAPRHLNLGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTN--STKSHSNPIK 710
Query: 378 VDI-LEGMHVISVACGYGHSLVI 399
+ ++G+ ++ +A G HS+ +
Sbjct: 711 IRFPIKGVQIVDIAVGSYHSMAV 733
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLP-- 285
++ ++ACGT+HT+ + G ++ WG YG+LG R +K + + +
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFS 548
Query: 286 -PEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYP-------KPLMDLSGWN 332
P ++ GS +S C G + WG+ L +Y K +++++G
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGE 608
Query: 333 L------RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS-AMPKKVDILEGMH 385
L C+ +GN WG G+LG G + KS A P+ +++ G
Sbjct: 609 LYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNL--GTP 666
Query: 386 VISVACGYGHSLVI 399
+I VA G H+LV+
Sbjct: 667 IIKVALGSSHTLVL 680
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 88/376 (23%), Positives = 140/376 (37%), Gaps = 76/376 (20%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
+AAG + H + + +G+ + WG N G+LG G + PT + LS+Y I AG
Sbjct: 224 IAAG--ARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
SH+ + G +G G+LG G T + C +
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGHG------------------TQSDCNIP-----RRI 318
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-----PRAIAALAGETIVKV 234
EG S LP + QL G N S + A+ P I A I +
Sbjct: 319 EGIS----SLP-FVQLTLGAFNSMALSQSGEVYIWGAKQHEIISLPTKIDAFDSH-ICHI 372
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-------DEWVPRRVDVFQRNNVLPP- 286
G + A+D + +Y W RL +K +E + +R++ +N VL P
Sbjct: 373 NSGPYISFAMDVRHNIYLWN----NRLLVNSKKSEALNASEEQLYKRMN--SKNPVLLPF 426
Query: 287 --------EAVISAG---------SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
+ + G V+ + GG + K+NG + +
Sbjct: 427 FQSKAFVDDCIFYMGFNLVDYKGNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP 486
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS-------SAMPKKVDIL 381
W++R + G H + I +WG +YG+LG +KS S + + +I
Sbjct: 487 SWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIK 546
Query: 382 EGMHVISVACGYGHSL 397
+ VACG HSL
Sbjct: 547 FSEPIRRVACGSWHSL 562
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--------NEI---EP 153
S++ + +++ G SHT+++ G A+G NK+GQLG + R NE EP
Sbjct: 483 SQIPSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEP 542
Query: 154 SPVRCLVSEVTATACGADFTVWLS---SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+ ++ + ACG+ W S ++G + + G GQLG G V
Sbjct: 543 TEIK-FSEPIRRVACGS----WHSLCCDIKG-NCFSWGRGDRGQLGTGAIRNLYEPAGIV 596
Query: 211 KLAYEAQPRPRAIAALAGE--TIVKVACGTNHTVAVDS--KGYVYTWGFGGYGRLG---H 263
L I GE + VAC T +D+ G ++ WG G G+LG H
Sbjct: 597 TLK-------NVIEVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDH 649
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ PR + N+ P ++ GS ++ G+L WG
Sbjct: 650 VLKSCIAAPRHL------NLGTPIIKVALGSSHTLVLTASGELITWG 690
Score = 46.2 bits (108), Expect = 0.048, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+++ L I VAAG H +D G YTWG G+LGHG + + P +
Sbjct: 263 PTQIKSLSQYHITLVAAG--ESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEG 320
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+S + G +++ +++ G +G +H
Sbjct: 321 ISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQH 353
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + LS KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+D FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
Length = 386
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 168/393 (42%), Gaps = 68/393 (17%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG-----RSHTVVVTEDGNSLAFGW 136
WG N GQLG+G + + P V L++ ++ AG RS V + DG ++G
Sbjct: 36 WGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQSWGG 95
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
N GQLG GS P+ V L S V+ TA G + +V G +L G YGQLG
Sbjct: 96 NAAGQLGDGSTVGRSFPAAVTGL-SGVSKTAAGVNSAY---AVRGGRVLAWGDNTYGQLG 151
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+GT A PRP A+ +L + +A G H +A+ G V+TWG
Sbjct: 152 NGTAG--------------ASPRPVAVQSL--NKVEDIAAGCFHAIALREDGTVWTWGRN 195
Query: 257 GYGRLGHREQKDEWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
YG+LG D P+RV DV + +SAG +S G + WG
Sbjct: 196 HYGQLGLGTTTDRNTPQRVPDLTDVVE----------VSAGCHHSLARTADGTVKAWGYN 245
Query: 313 KN----NGDDWMYPKP-----LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
+ NG P L D+S R +G V D +WG G LG
Sbjct: 246 ASGQLGNGSTAHASAPVDVAHLADVS----RIFAAGYHSFAVLDDGQLRAWGWNSAGHLG 301
Query: 364 YGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIVDRTNV---GER-LDQLDVYDGK 418
G +++ +P + G+ V ++A GY H++ ++ +V GE L QL DG
Sbjct: 302 DGSTVSRTTPVP-----VPGLTDVTALAGGYNHTVAVLADGSVLAWGENTLGQLG--DGT 354
Query: 419 ASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKK 451
++ + +PP GA +V+ ++ R
Sbjct: 355 TTNSSTPV----TALPPGSGATRVAVSTVSRTS 383
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 151/343 (44%), Gaps = 43/343 (12%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVS---CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+P +R L D+R +AAG S VA+ +G +WG N GQLG G + R P
Sbjct: 54 TPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQSWGGNAAGQLGDGSTVGRSFPA 113
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V+ LS AG ++ V G LA+G N +GQLG+G+ P V+ L ++
Sbjct: 114 AVTGLSGVSKTAAGVNSAYAV---RGGRVLAWGDNTYGQLGNGTAGASPRPVAVQSL-NK 169
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G + L E ++ G YGQLG GT + NT P+
Sbjct: 170 VEDIAAGCFHAIALR--EDGTVWTWGRNHYGQLGLGTTTDRNT--------------PQR 213
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L +V+V+ G +H++A + G V WG+ G+LG+ P VDV +
Sbjct: 214 VPDL--TDVVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTAHASAP--VDVAHLAD 269
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCM 336
V + I A +S GQL WG + GD P P+ L+ ++ +
Sbjct: 270 V----SRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTPVPVPGLT--DVTAL 323
Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS---SAMP 375
G H V AD S ++WG G+LG G S +A+P
Sbjct: 324 AGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSSTPVTALP 366
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 159/388 (40%), Gaps = 56/388 (14%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
LD L P L V +D+ +A G H V V +G ++WG G+LGHG +
Sbjct: 276 LDALL--PKALESTVVLDVHGIACG--GRHAVLVTRQGEIFSWGEESGGRLGHGVEADVS 331
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVR 157
P I+ LS ++ G HT VT G+ +G H G LG GS + P V
Sbjct: 332 HPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVG 391
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V+ +CGA T ++S + G +G LGHG N
Sbjct: 392 GQMEGIRVSYISCGAWHTAVVTS--AGQLFTFGDGSFGALGHGDHITSNF---------- 439
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV---------------DSKGYVYTWGFGGYGR 260
PR + L G KVACG HT A S +YTWG G GR
Sbjct: 440 ----PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGR 495
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMWGKLK 313
LGH + + VP V + A+ +AG V + + GQL G
Sbjct: 496 LGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL---GSAT 552
Query: 314 NNGDDWMYPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKS 371
NG P + +++ + + G+ H + + + +WG G+LG+G ++
Sbjct: 553 ANGK---LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRN 609
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P VD+L+ V +VACG ++VI
Sbjct: 610 T--PTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 44/279 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
SP + L GV I A G HC+AVD +GR Y WG NE GQ G + ++
Sbjct: 84 SPAPVEALAGVKIVQAAIG--GWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALR 141
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
RD PT K K+++ AG +H+VV+T++G+ +G W G I+ P
Sbjct: 142 RDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQPWPP------GDIKQISTPVR 195
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
V+ L +V A GA + LS E A + G +YGQLG G +
Sbjct: 196 VQGL-EKVMMIAVGAFHNLALS--EDAVLWAWGNNEYGQLGIG----------------D 236
Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
QPR P + L+G ++V +A G H+ A+ G VY WG G +GRLG + K VP
Sbjct: 237 TQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVP 296
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+V + +++ +S G +S G+++ +G+
Sbjct: 297 LKVQLLDGEDIVQ----VSCGGTHSVALTSDGRIFSYGR 331
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 163/378 (43%), Gaps = 47/378 (12%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G ++D V+ L Y + AG +++ + +DG +GWN+ G
Sbjct: 13 WGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWNQRGT 72
Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E P+PV L ++ A G L+ + G +YGQ G
Sbjct: 73 LGHPPETKTESSPAPVEALAGVKIVQAAIGGWHC--LAVDDKGRAYAWGGNEYGQCG--- 127
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E K+ + P P+ A + +VA G H+V + +G+V+TWG
Sbjct: 128 -EEPERKEDGTRALRRDIPTPQRCALKL--KVQQVAAGGTHSVVLTQEGHVWTWG----- 179
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN- 315
W P +++ R L +I+ G+ ++ + L+ WG NN
Sbjct: 180 --------QPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWG---NNE 228
Query: 316 ------GDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
GD +P+ LSG +L + +G H + D +WG ++G LG+G
Sbjct: 229 YGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFG- 287
Query: 367 YGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RLDQLDV-YDGKASSQ 422
KSS M P KV +L+G ++ V+CG HS+ + + R D + Y K ++
Sbjct: 288 -DDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTG 346
Query: 423 DNEEIDRNSTVPPKKGAA 440
E+ N +PP K +A
Sbjct: 347 HPMEVPLN--LPPPKTSA 362
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 172/385 (44%), Gaps = 57/385 (14%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSEL 107
R+ L + V AG S + +A+ +GR +TWG N+RG LGH + + + P V L
Sbjct: 34 RVAALDPYAVSAVVAG--SRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEAL 91
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------SGSIRNEIEPSPVRC 158
+ KI +A G H + V + G + A+G N++GQ G + ++R +I P+P RC
Sbjct: 92 AGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDI-PTPQRC 150
Query: 159 -LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L +V A G +V L+ EG + G P G + +T
Sbjct: 151 ALKLKVQQVAAGGTHSVVLTQ-EG-HVWTWGQP----WPPGDIKQIST------------ 192
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + L E ++ +A G H +A+ ++ WG YG+LG + + P RV+
Sbjct: 193 --PVRVQGL--EKVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEG 248
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSG 330
+++ I+AG +S+ G++Y WG+ ++ GDD M P + L G
Sbjct: 249 LSGLSLVD----IAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDG 304
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM--------PKKVDIL 381
++ + G H + +D S+G +G LGYG M PK
Sbjct: 305 EDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGP 364
Query: 382 EGM-HVISVACGYGHSLVIVDRTNV 405
+G+ VACG H+L IV T++
Sbjct: 365 DGLWQANFVACGGRHTLAIVTWTDM 389
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +P R++ L + +A G + H +A+ + + WG NE GQLG GD R +P
Sbjct: 189 QISTPVRVQGLE--KVMMIAVG--AFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPI 244
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
V LS + AG H+ +T+DG A+G +HG+LG G + + + P V+ L
Sbjct: 245 RVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDG 304
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E + +CG +V L+S I + G +G+LG+G T +++ P P
Sbjct: 305 EDIVQVSCGGTHSVALTS--DGRIFSYGRGDHGRLGYG---RKVTTGHPMEVPLNLPP-P 358
Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
+ A G VACG HT+A+
Sbjct: 359 KTSAGPDGLWQANFVACGGRHTLAI 383
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 26 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 85
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 86 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 145
Query: 175 WLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 146 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTE 188
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
+ACG HT A V S G +Y++G GG G+LG
Sbjct: 189 IACGRQHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L+ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 70 SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 127
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 128 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 187
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 188 EIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 221
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 22/176 (12%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 80
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+ +
Sbjct: 81 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYV 122
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 123 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 178
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
R R I +L+ IV+VACG H++A+ V+ WG YG+LG + K + P+ +
Sbjct: 17 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-- 74
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
++ + P ++AG +S G ++ WG+ K N+ +D P L L
Sbjct: 75 --KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 132
Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H + + ++G YG+LG+ + + P+KV L G V +A
Sbjct: 133 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTEIA 190
Query: 391 CGYGHSLVIV 400
CG H+ V
Sbjct: 191 CGRQHTSAFV 200
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 123 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 180
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 181 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 164/380 (43%), Gaps = 49/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G + H +G +TWG G+LGHG RP
Sbjct: 243 DVLIPKPLESDVVLDVNQIACG--TRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V LS + G HT VT G+ +G + G LG G+ + P V +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+V + ACG+ W S++ +S + G +G LGHG D E LAY
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV----DSKGY------VYTWGFGGYGRLGHREQ 266
P+ + AL+G +KVACG H+ A+ + G +YTWG G RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
+ VP+ V N ++ G + A G+++ G+L N D
Sbjct: 463 EPRLVPKCVQALLEYNF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L+ + + G H + + S +WG G LG+G K P V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S++CG + I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACGT H +G V+TWG GRLGH D P+ V+
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V +IS G ++ G L+ WG L G + W+ K L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G +++ A PK+V+ L G I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 66/468 (14%)
Query: 36 RKGALDGNLVSPTRLRP-LVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG D L P +L P L G ++ R++ C H AV +G +TWG N+ GQL
Sbjct: 34 RKGK-DHQLRVPRQLHPDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWGANDFGQL 92
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
G G + + P V++L +K G T + E DG S W GS
Sbjct: 93 GDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSN 152
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE--- 202
R + ++ +V+ CGA V LS + + G +YGQLG G +E
Sbjct: 153 FPRLFWGAFTPQTIIRQVS---CGAVHVVALS--DDGQLQAWGYNEYGQLGRGVTSEGLQ 207
Query: 203 -YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
++ K EA P + TI KV+CG H+ A+ G VYTWG G G+L
Sbjct: 208 GARIINAFAKFLDEA---PELV------TITKVSCGEYHSAAISENGEVYTWGLGSMGQL 258
Query: 262 GH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------- 311
GH + E +PRRV V I+ G V++ G LY WG
Sbjct: 259 GHCSLQSADKELIPRRVVALDGICVKD----IACGGVHTCAITQNGSLYAWGGGQVGQLG 314
Query: 312 ----------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYG 360
+ + + ++ P++ +S ++ + G+ H V D WG+ YG
Sbjct: 315 VGPQTGFFSCIAGDSETFLRNLPVVVVSD-GVQHVACGHSHTLVSTKDGRIHGWGYNSYG 373
Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGK 418
+ +KS+ P VD G V +A G GHS V+ D ++ E L + + D
Sbjct: 374 QAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKE-LCEFRLAD-T 426
Query: 419 ASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKDSSEEEEEEENSD 466
+SQ+ EI+ ++ A++ + R+ D E EE+E S+
Sbjct: 427 VNSQNASEIEDVASRTGSDALARLCG--RLRESVLDGRCEFEEDETSN 472
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 156/374 (41%), Gaps = 45/374 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A C H V V +G ++WG G+LGHG P ++
Sbjct: 303 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 360
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 361 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 420
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 421 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 464
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G RLGH +++ + VP
Sbjct: 465 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 524
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N D P +
Sbjct: 525 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDG 580
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 581 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 638
Query: 386 VISVACGYGHSLVI 399
V S+ACG + +
Sbjct: 639 VKSIACGSNFTAAV 652
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 310 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 353
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ I AL I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 354 HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 413
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 414 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 439
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 440 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 483
Query: 399 IVD 401
+V+
Sbjct: 484 VVE 486
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 161/368 (43%), Gaps = 40/368 (10%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+ D N P R+R L GV VA H +AV +G + WG N GQLG G
Sbjct: 95 GSFD-NRAEPVRVRGLSGV----VAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDN 149
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V S AG +H++ V DG A+G N +GQLG+ N EP V
Sbjct: 150 RAEPVRVRGSSGVVAVAAGG--AHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVL 207
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
+ VT +A GA+ ++ +S+ ++ G +GQLG + V
Sbjct: 208 RVTGGVTVSA-GANHSLAVSA--DGTVWAWGDNSHGQLGIARTTPLLSIPGRV------- 257
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P R A+ A G NH++AV G V+ WG G+G+LG+ D P RV
Sbjct: 258 PEVRGSVAM--------AAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPG 309
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNL 333
+ ++AGS +S G ++ WG + +G P +
Sbjct: 310 LEG------VGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVSGV 363
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ + H V AD S +WGH +GELG G ++S P +VD L+ V++VA G
Sbjct: 364 VGVAANVFHSLAVSADGSAWAWGHNSHGELGDGS--TRNSPAPVRVDGLK--EVVAVAAG 419
Query: 393 YGHSLVIV 400
HSL ++
Sbjct: 420 SSHSLALL 427
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 152/352 (43%), Gaps = 53/352 (15%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H ++V +G + G N GQLG G R P V LS AG G H++ V
Sbjct: 20 SHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGVVTVAAGGG--HSLAVHS 77
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSV 179
DG A+G N GQLG GS N EP VR L S V A A G AD TVW
Sbjct: 78 DGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGL-SGVVAVAAGGYHSLAVSADGTVWA--- 133
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G GQLG D ++ + V++ +V VA G
Sbjct: 134 -------WGNNSSGQLG---DGSFDNRAEPVRVRGS-------------SGVVAVAAGGA 170
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++AV S G ++ WG YG+LG+R + + P V V + + +SAG+ +S
Sbjct: 171 HSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEP--VQVLR----VTGGVTVSAGANHSLA 224
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW--NLR---CMDSGNMHHF-VGADSSCIS 353
+ G ++ WG + PL+ + G +R M +G+ H V D + +
Sbjct: 225 VSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWA 284
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG +G+LG G S P +V LEG V +VA G HSL + D V
Sbjct: 285 WGSNGHGQLGNGFMVDNSE--PGRVPGLEG--VGAVAAGSNHSLAVRDDGTV 332
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H +AV +G + WG N G+LG G R+ P V ++ AG SH++ +
Sbjct: 371 FHSLAVSADGSAWAWGHNSHGELGDGST--RNSPAPVRVDGLKEVVAVAAGSSHSLALLA 428
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG LA+G N GQLG G+ + P+ VR L V A A G+ + L+ + ++
Sbjct: 429 DGTVLAWGDNTFGQLGDGTRASHSVPAQVRGL-RGVVAVAAGSSHS--LALLADGTVWTW 485
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG GT YE P A+ L E +V VA G NH++AV S
Sbjct: 486 GYNLNGQLGDGT----------TTYRYE----PVAVKGL--EGVVAVAAGGNHSLAVRSD 529
Query: 248 GYVYTWGFGGYGRLG 262
G + WG G+LG
Sbjct: 530 GTAWAWGENVKGQLG 544
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 40/344 (11%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G SH++ V +DG A G N GQLG G+ + PVR L +S V A G + L
Sbjct: 18 GGSHSLSVHQDGTVWAVGGNSVGQLGDGT--TSLRRVPVRVLGLSGVVTVAAGGGHS--L 73
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ ++ G GQLG G+ ++ + P + L+G +V VA
Sbjct: 74 AVHSDGTVWAWGNNSSGQLGDGS--------------FDNRAEPVRVRGLSG--VVAVAA 117
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G H++AV + G V+ WG G+LG + P RV ++AG +
Sbjct: 118 GGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSG------VVAVAAGGAH 171
Query: 297 SSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
S G L+ W G+L N G+ + P ++ ++G + N V AD +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTG-GVTVSAGANHSLAVSADGT 230
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
+WG +G+LG S +P +V + G +++A G HSL + D V
Sbjct: 231 VWAWGDNSHGQLGIARTTPLLS-IPGRVPEVRGS--VAMAAGDNHSLAVRDDGTVWAWGS 287
Query: 411 QLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKD 454
G DN E R VP +G V+ S +D
Sbjct: 288 NGHGQLGNGFMVDNSEPGR---VPGLEGVGAVAAGSNHSLAVRD 328
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV VA H +AV +G + WG N +GQLG G R P V
Sbjct: 504 PVAVKGLEGV----VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVEVKA 559
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTA 165
+K G ++ V DG A+G N GQLG GS + P P+R EV A
Sbjct: 560 AAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVA 613
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G ++ LS G + G GQLG GT + +LA P +
Sbjct: 614 VAAGNGHSLALSPEGG--VWAWGQNARGQLGEGTLDR--------RLA------PTRVQG 657
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
L+G VA G ++AV G V++WG +G+LG+
Sbjct: 658 LSGVV--AVAAGGAFSLAVRDDGSVWSWGDNAFGQLGN 693
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 32 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 91
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 92 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 151
Query: 175 WLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 152 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTE 194
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
+ACG HT A V S G +Y++G GG G+LG
Sbjct: 195 IACGRQHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L+ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 76 SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 133
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 134 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 193
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 194 EIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 227
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 22/176 (12%)
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 86
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+ +
Sbjct: 87 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYV 128
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 129 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 184
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
R R I +L+ IV+VACG H++A+ V+ WG YG+LG + K + P+ +
Sbjct: 23 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-- 80
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
++ + P ++AG +S G ++ WG+ K N+ +D P L L
Sbjct: 81 --KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 138
Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H + + ++G YG+LG+ + + P+KV L G V +A
Sbjct: 139 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTEIA 196
Query: 391 CGYGHSLVIV 400
CG H+ V
Sbjct: 197 CGRQHTSAFV 206
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 129 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 186
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 187 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 152/376 (40%), Gaps = 47/376 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ ++ C H V +G Y+WG G+LGHG +P ++
Sbjct: 346 PKPLEFAVKLDVQNIS--CGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDA 403
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
L+ I+ G HT VT G+ + G + G LG G+ + P V +
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V+A +CG T ++S + G +G LGHG + PR
Sbjct: 464 VSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV--------------PRE 507
Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
+ +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 508 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 567
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
VP V V P I+ G + G +Y ++G+L N D M P +
Sbjct: 568 VPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRV 623
Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
N S +H + + + +WG G LG+G +SS P V+ L+
Sbjct: 624 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTLVESLKD 681
Query: 384 MHVISVACGYGHSLVI 399
V +V CG + I
Sbjct: 682 KQVRTVVCGINFTAAI 697
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 406 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 461
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 462 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 519
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 520 ACGVWHTAAVVE 531
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 158/371 (42%), Gaps = 59/371 (15%)
Query: 47 PTRLRPLVGVDIRFVAAG--CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
PT L V + +A+ C H + + V+G+ Y+ G N++GQLGH K R +P V
Sbjct: 111 PTELEAFSSVSMSTLASAIACGRAHTLFL-VDGQVYSCGSNDQGQLGH--KKHRSKPERV 167
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L Y I + G +H++ +T +G A+G NK QLG + +PS + +
Sbjct: 168 DALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPS------TRSS 221
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-EAQPRPRAI 223
A A +S++ L+A LAY + RPR +
Sbjct: 222 APKTAA------ASIDDVDELDAA----------------------TLAYMDFMTRPRLV 253
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AL G IV++ CG N ++ + +G V+ WG G+L RE K VP V
Sbjct: 254 RALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGI-- 311
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKP--LMDLSGWNLR 334
P ++AG ++ GQ+Y WG NN GD + P L L
Sbjct: 312 --PIRQLAAGGRHTLALTFNGQVYSWG---NNQFGQLGVGDTAPHTIPSRLKTLEHQFCA 366
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H V ++ + S+G G+LG+G + + P+ + L G V CG
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEIN--PRMIFELMGKSASQVLCGR 424
Query: 394 GHSLVIVDRTN 404
H++V +TN
Sbjct: 425 RHTIVFFPKTN 435
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 117/268 (43%), Gaps = 30/268 (11%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+ P +R L G I V C + + + G + WG N GQL + PT+
Sbjct: 247 MTRPRLVRALTGHKI--VQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTL 304
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
V EL I++ AG HT+ +T +G ++G N+ GQLG G PS ++ L +
Sbjct: 305 VKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQF 364
Query: 164 TA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLAYEAQPRPR 221
A ACG D +V L+ G AG GQLGHGT NE N PR
Sbjct: 365 CAHIACGEDHSVVLTETGGVYSFGAG--GQGQLGHGTLQNEIN---------------PR 407
Query: 222 AIAALAGETIVKVACGTNHTVAVDSK-GYVYTWGFGGYGRLGH----REQKDEWVPRRVD 276
I L G++ +V CG HT+ K +Y +G GG G+LG Q+ P V
Sbjct: 408 MIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVR 467
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGG 304
V +L I+ G+ S C A G
Sbjct: 468 VLDATPILR----IATGASASHCFAVVG 491
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 22/175 (12%)
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP--LMDLSGWNLRCMD 337
R+ V+P AGSV + GQL G N P+P L S ++ +
Sbjct: 70 RDTVVPAAHAQLAGSVWAWGNPTDGQL---GLRLTNDHTLAVPEPTELEAFSSVSMSTLA 126
Query: 338 S----GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
S G H D S G G+LG+ +K + P++VD LE + +ACG
Sbjct: 127 SAIACGRAHTLFLVDGQVYSCGSNDQGQLGH----KKHRSKPERVDALEPYTITQIACGE 182
Query: 394 GHSLVIVDRTNV----GERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSN 444
HSL + V + QL + ++S Q + R+S PK AA + +
Sbjct: 183 THSLALTSNGQVFAWGDNKASQLGLTPSESSRQPST---RSSA--PKTAAASIDD 232
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 159/378 (42%), Gaps = 51/378 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L +V +D++ +A C + H V +G ++WG G+LGHG P ++
Sbjct: 299 PKALESVVVLDVQNIA--CGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDA 356
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLV 160
LS I+ G HT VT G+ +G + G LG G + P P++ L
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL- 415
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+++ +CG T ++S + G +G LGHG + + P
Sbjct: 416 -HISSISCGPWHTALVTS--AGKLFTFGDGTFGVLGHGDRDSISI--------------P 458
Query: 221 RAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKD 268
R + +L G V+ ACG HT AV +S G ++TWG G GRLGH +++
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEA 518
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPK 323
VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 519 RLVPTCVAAL----VEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPA 574
Query: 324 PLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ LS + + G H + + + +WG G LG+G +++ P V+ L
Sbjct: 575 RVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT--PTLVEAL 632
Query: 382 EGMHVISVACGYGHSLVI 399
+ V S+ACG + I
Sbjct: 633 KDKQVKSIACGTNFTAAI 650
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ ++ + +ACG H V +G V++WG GRLGH D P+ +D
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G D W+ + L G
Sbjct: 359 NLNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG--DRDSISIPREVESLKGLRTVRA 472
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 473 ACGVWHTAAVVE 484
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 33/328 (10%)
Query: 95 KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
KI P + + ++ G H +VT+ G ++G G+LG G + P
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ L + + ACG T ++ G G LGHG D +
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWV-------- 404
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ R L G I ++CG HT V S G ++T+G G +G LGH ++ +PR
Sbjct: 405 ----PK-RVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPR 459
Query: 274 RVDVFQ-RNNVLPPEAVISAGSV-------NSSCTAGGGQLYMWGK----LKNNGDD--W 319
V+ + V V +V +S G+L+ WG +GD
Sbjct: 460 EVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKV 378
+ P + L N + G+ +S I + G YG+LG P Q +P +V
Sbjct: 520 LVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NP--QADGKLPARV 576
Query: 379 D-ILEGMHVISVACGYGHSLVIVDRTNV 405
+ L V +ACG H V+ RT V
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEV 604
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 159/378 (42%), Gaps = 51/378 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L +V +D++ +A C + H V +G ++WG G+LGHG P ++
Sbjct: 299 PKALESVVVLDVQNIA--CGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDA 356
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLV 160
LS I+ G HT VT G+ +G + G LG G + P P++ L
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL- 415
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+++ +CG T ++S + G +G LGHG + + P
Sbjct: 416 -HISSISCGPWHTALVTS--AGKLFTFGDGTFGVLGHGDRDSISI--------------P 458
Query: 221 RAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKD 268
R + +L G V+ ACG HT AV +S G ++TWG G GRLGH +++
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEA 518
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPK 323
VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 519 RLVPTCVAAL----VEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPA 574
Query: 324 PLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ LS + + G H + + + +WG G LG+G +++ P V+ L
Sbjct: 575 RVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT--PTLVEAL 632
Query: 382 EGMHVISVACGYGHSLVI 399
+ V S+ACG + I
Sbjct: 633 KDKQVKSIACGTNFTAAI 650
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ ++ + +ACG H V +G V++WG GRLGH D P+ +D
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G D W+ + L G
Sbjct: 359 NLNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG--DRDSISIPREVESLKGLRTVRA 472
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 473 ACGVWHTAAVVE 484
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 33/328 (10%)
Query: 95 KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
KI P + + ++ G H +VT+ G ++G G+LG G + P
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ L + + ACG T ++ G G LGHG D +
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWV-------- 404
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ R L G I ++CG HT V S G ++T+G G +G LGH ++ +PR
Sbjct: 405 ----PK-RVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPR 459
Query: 274 RVDVFQ-RNNVLPPEAVISAGSV-------NSSCTAGGGQLYMWGK----LKNNGDD--W 319
V+ + V V +V +S G+L+ WG +GD
Sbjct: 460 EVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKV 378
+ P + L N + G+ +S I + G YG+LG P Q +P +V
Sbjct: 520 LVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NP--QADGKLPARV 576
Query: 379 D-ILEGMHVISVACGYGHSLVIVDRTNV 405
+ L V +ACG H V+ RT V
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEV 604
>gi|42572237|ref|NP_974213.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640471|gb|AEE73992.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1081
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P R+ L G I+ V+A H VA+ G YTWG G+LGH G
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++S L ++K A + HTV+ TE G+ +G N+ GQLG S+ + P V L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ A + T +S + + G + GQLG+GT N +
Sbjct: 295 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 340
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ +A HT+ + + G VYTW GHR PRRV +
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHRLV----TPRRVIISR 388
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
F R L A I+AG V+S A G + W
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 432
Query: 327 DLSGWNLRCMDSGNMH 342
S NLRC ++H
Sbjct: 433 --SDSNLRCQQLHSLH 446
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P + +L G I V+ H+VA+ + G VYTWGFG GRLGH E
Sbjct: 173 VQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------F 223
Query: 276 DVFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGD 317
D+ + V+ P VIS A ++ GG +Y WG + + D
Sbjct: 224 DIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVD 283
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + L + + + N H V +D +WG + G+LGYG S+ P+
Sbjct: 284 TQATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPR 342
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD L+G ++A H+LV+
Sbjct: 343 LVDYLKGKVFTAIASSKYHTLVL 365
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 37/249 (14%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G++ + P V L IK A + H+V ++ G +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTW 210
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVS-----EVTATACGADFTVWLSSVEGAS 183
G+ + G+LG I P R ++S V A A TV + EG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITP---RQVISGLGSRRVKAVAAAKHHTVI--ATEGGD 265
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G + GQLG Y + D+ Q PR + +L + IV V+ HT
Sbjct: 266 VYTWGSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAV 310
Query: 244 VDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
V G V+TWG G+LG+ + PR VD + + V I++ ++
Sbjct: 311 VSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLR 366
Query: 302 GGGQLYMWG 310
G++Y WG
Sbjct: 367 NDGEVYTWG 375
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G +LG Q + VP RVD + ++SA +S + G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 210
Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
G + + P +SG R + + HH V A +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LGY + A P+KV L+ +++V+ H+ V+ D
Sbjct: 271 SNREGQLGYT--SVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSD 313
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 164/380 (43%), Gaps = 49/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G + H +G +TWG G+LGHG RP
Sbjct: 243 DVLIPKPLESDVVLDVNQIACG--TRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V LS + G HT VT G+ +G + G LG G+ + P V +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+V + ACG+ W S++ +S + G +G LGHG D E LAY
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV----DSKGY------VYTWGFGGYGRLGHREQ 266
P+ + AL+G +KVACG H+ A+ + G +YTWG G RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
+ VP+ V N ++ G + A G+++ G+L N D
Sbjct: 463 EPRLVPKCVQALLEYNF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L+ + + G H + + S +WG G LG+G K P V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S++CG + I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACGT H +G V+TWG GRLGH D P+ V+
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V +IS G ++ G L+ WG L G + W+ K L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G +++ A PK+V+ L G I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 36/333 (10%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG G+LG G ++ P + + KA G +HT+ +T+DG + G N
Sbjct: 2 FGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSN 61
Query: 138 KHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG R P V L + ACG ++ LS + + G YGQLG
Sbjct: 62 DYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEMHSLALS--RWGEVFSWGSDNYGQLG 117
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
H +L Q P+ I +LA +V++A G H+VA+ + G ++ WG
Sbjct: 118 H-------------QLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGAN 164
Query: 257 GYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
+G+LG E P V P A+I+ G+ ++ + G ++ WGK N
Sbjct: 165 DFGQLGLGTITPYESTPTTVCSLSG----IPFALIACGANHTFAVSKSGAVFGWGK-NIN 219
Query: 316 GDDWM-------YPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
G + +P L L +R + G+ F+ D S G YG+LG+G
Sbjct: 220 GQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHG-- 277
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G + +P++V L G + ++CG HSL V
Sbjct: 278 GTSNEILPRQVLELMGSTITQISCGRQHSLAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G+ Y+ G N+ GQLGH R RP +VS L Y I G H++ ++
Sbjct: 45 HTLFLTKDGKVYSCGSNDYGQLGHDQP--RKRPQLVSGLDAYSIINVACGEMHSLALSRW 102
Query: 129 GNSLAFGWNKHGQLGS---GSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
G ++G + +GQLG G++ +I P ++ L +V A G +V L++ I
Sbjct: 103 GEVFSWGSDNYGQLGHQLGGTL--QIVPKLIKSLAKYQVVQIAAGQRHSVALTN--AGEI 158
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G +GQLG GT Y + P + +L+G +ACG NHT AV
Sbjct: 159 FVWGANDFGQLGLGTITPYEST-------------PTTVCSLSGIPFALIACGANHTFAV 205
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+ WG G+LG + + P ++ + + V IS G S+ G
Sbjct: 206 SKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRV----RFISCGDEFSTFLTLDG 261
Query: 305 QLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ M+G+L + G + + P+ +++L G + + G H
Sbjct: 262 GVFSCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQH 305
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 27/239 (11%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNL-VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GE+ GS + +G + G G L + P ++ L + +AAG H VA+ G
Sbjct: 103 GEVFSWGSDNYGQLGHQLG---GTLQIVPKLIKSLAKYQVVQIAAG--QRHSVALTNAGE 157
Query: 79 CYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG N+ GQLG G + PT V LS G +HT V++ G +G N
Sbjct: 158 IFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKN 217
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG ++ P+ +R L S V +CG +F+ +L+ G AG+ YGQLG
Sbjct: 218 INGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGM--YGQLG 275
Query: 197 HG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTW 253
HG T NE PR + L G TI +++CG H++A V S+G VY++
Sbjct: 276 HGGTSNEI---------------LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 32/264 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVE 76
K G++ CGS + +G + LVS G+D + C H +A+
Sbjct: 51 KDGKVYSCGSNDYGQLGHDQPRKRPQLVS--------GLDAYSIINVACGEMHSLALSRW 102
Query: 77 GRCYTWGRNERGQLGH--GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G ++WG + GQLGH G +Q P ++ L+KY++ + AG+ H+V +T G +
Sbjct: 103 GEVFSWGSDNYGQLGHQLGGTLQI-VPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVW 161
Query: 135 GWNKHGQLGSGSIR-NEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ 191
G N GQLG G+I E P+ V C +S + ACGA+ T +S + ++ G
Sbjct: 162 GANDFGQLGLGTITPYESTPTTV-CSLSGIPFALIACGANHTFAVS--KSGAVFGWGKNI 218
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG + +V + Q R L + ++CG + + G V+
Sbjct: 219 NGQLG---------LNDTVSKKFPTQLR-----TLRNSRVRFISCGDEFSTFLTLDGGVF 264
Query: 252 TWGFGGYGRLGHREQKDEWVPRRV 275
+ G G YG+LGH +E +PR+V
Sbjct: 265 SCGAGMYGQLGHGGTSNEILPRQV 288
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GE+ G+ + +G G + +PT + L G+ +A G + H AV G
Sbjct: 155 AGEIFVWGANDFGQLGL--GTITPYESTPTTVCSLSGIPFALIACG--ANHTFAVSKSGA 210
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG+N GQLG D + + PT + L +++ G + +T DG + G
Sbjct: 211 VFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGM 270
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
+GQLG G NEI P V L+ S +T +CG
Sbjct: 271 YGQLGHGGTSNEILPRQVLELMGSTITQISCG 302
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 57/189 (30%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ ++++K A G NHT+ + G VY+ G YG+LGH + PR+
Sbjct: 25 PKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQ------PRK----- 73
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
P+ + L +++ + G
Sbjct: 74 -----------------------------------------RPQLVSGLDAYSIINVACG 92
Query: 340 NMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
MH + SWG YG+LG+ G +PK + L V+ +A G HS+
Sbjct: 93 EMHSLALSRWGEVFSWGSDNYGQLGHQ-LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVA 151
Query: 399 IVDRTNVGE 407
+ TN GE
Sbjct: 152 L---TNAGE 157
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ + Y+WG + G+LGHGD ++ PT++ L I G +++ ++ +
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
G +G +G+LG G+ + + P+ + L E + ACG+ + L + +
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G + PR I L IV+V CG +VA+
Sbjct: 646 GDGDYGKLGRG--------------GSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G+VYTWG G +LGH +++ P V+V + V+ +S G + G++Y
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG----VSLGVSHVLALTDQGEVY 747
Query: 308 MWGKLKN 314
WGK +N
Sbjct: 748 GWGKNEN 754
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 220 PRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+ + AL + ++K+A H +A+ VY+WG G GRLGH + + P +
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSG 330
+ +++ E G S+ + G LY WG+ N G +D + P + LS
Sbjct: 564 LKGKDIIDVEC----GGTYSAAISANGALYTWGR-GNYGRLGHGTAEDCLTPTMISALSD 618
Query: 331 WNLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
++ + G+ + A + CI SWG YG+LG G G S +P+ ++ L+
Sbjct: 619 EHIIKVACGSFY----AHTLCITSQGKVYSWGDGDYGKLGRG--GSDGSKLPRLIEKLQN 672
Query: 384 MHVISVACGYGHSLVI 399
+ ++ V CG S+ +
Sbjct: 673 VKIVQVYCGAQFSVAL 688
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++PT + L I VA G H + + +G+ Y+WG + G+LG G P ++
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLI 667
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
+L KI + G +V ++EDG+ +G + +LG + N P V L +V
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKV 727
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ G + L+ Q G G + DSS + PR I
Sbjct: 728 VGVSLGVSHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQ----PRLI 771
Query: 224 AALAGETIVKVACGTNHTVA 243
AL G+ +V V CG + A
Sbjct: 772 EALKGQKVVGVCCGPAQSFA 791
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 153/369 (41%), Gaps = 52/369 (14%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ FVA C S A+D G+ YTWGR++ G LG+G + P++V L K
Sbjct: 61 DVLFVA--CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVA 118
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS----------------PVRCLV 160
G H +T DG +G HG+LG + PS + L
Sbjct: 119 CGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLN 178
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+V A G FT+ LS E ++ + GL + G LG+ T N +P
Sbjct: 179 FKVQQVALGDQFTIILS--EDGNVYSVGLNKKGILGYQTKN-------------VDEPTF 223
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ I L + IV++ GT+ +VA+DS G ++ WG +G+LG P V Q+
Sbjct: 224 KQIPDL--KNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPS------PSVVQTPQQ 275
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM-------YPKPLMDLSGWNL 333
LP S G + G LY WG GD + P P N+
Sbjct: 276 IKGLPKIKQFSCGEQFIGALSTDGVLYTWGF---GGDGQLGTPSKQDIPTPHKIQFDQNI 332
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + + + G + G+LG G + ++ + +L +VI +ACG
Sbjct: 333 DKVSCGQAHVGIVSKNKLYMHGRGKEGQLGRGSETESPNS-SRYSPLLVMENVIKIACGG 391
Query: 394 GHSLVIVDR 402
HS +V++
Sbjct: 392 SHSFAVVNQ 400
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
V S+ +Y WG+ +G+LG ++ P+ V + +VL ++ S S+
Sbjct: 26 VFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QDVL----FVACKSSVSAAIDKS 78
Query: 304 GQLYMWGK----LKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGH 356
G+LY WG+ L NG ++ P + L + + + GN H + D +WG+
Sbjct: 79 GKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGN 138
Query: 357 AQYGELGY 364
+G+LG+
Sbjct: 139 FDHGKLGH 146
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + LS KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+D FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 154/367 (41%), Gaps = 45/367 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A C H V V +G ++WG G+LGHG P ++
Sbjct: 337 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 394
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 395 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 454
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG SV + PR +
Sbjct: 455 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 498
Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G RLGH +++ + VP
Sbjct: 499 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 558
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
V V P ++ G + G +Y ++G+L N D P +
Sbjct: 559 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDG 614
Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 615 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 672
Query: 386 VISVACG 392
V S+ACG
Sbjct: 673 VKSIACG 679
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V +V ACG V L + +G S + G G+LGHG D+
Sbjct: 344 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 387
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ I AL I VACG H+ AV G +YTWG G +G LGH + WVP+RV+
Sbjct: 388 HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 447
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + I+ G +++ GQL+
Sbjct: 448 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 473
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G +G LG+G +KS +P++VD L+G+ + ACG H+
Sbjct: 474 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 517
Query: 399 IVD 401
+V+
Sbjct: 518 VVE 520
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++ +LGHGDK + PT V+
Sbjct: 503 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 562
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G S TV +T G+ G +GQLG+ G + ++ + V
Sbjct: 563 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVE 622
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ ACGA L+S + G G+LGHG ++ N+ P
Sbjct: 623 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDADDRNS--------------PT 663
Query: 222 AIAALAGETIVKVACGTNHTVAV 244
+ +L + + +ACG+N T AV
Sbjct: 664 LVESLKDKQVKSIACGSNFTAAV 686
>gi|26449496|dbj|BAC41874.1| unknown protein [Arabidopsis thaliana]
Length = 1078
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P R+ L G I+ V+A H VA+ G YTWG G+LGH G
Sbjct: 174 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 231
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++S L ++K A + HTV+ TE G+ +G N+ GQLG S+ + P V L
Sbjct: 232 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 291
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ A + T +S + + G + GQLG+GT N +
Sbjct: 292 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 337
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ +A HT+ + + G VYTW GHR PRRV +
Sbjct: 338 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHRLV----TPRRVIISR 385
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
F R L A I+AG V+S A G + W
Sbjct: 386 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 429
Query: 327 DLSGWNLRCMDSGNMH 342
S NLRC ++H
Sbjct: 430 --SDSNLRCQQLHSLH 443
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P + +L G I V+ H+VA+ + G VYTWGFG GRLGH E
Sbjct: 170 VQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------F 220
Query: 276 DVFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGD 317
D+ + V+ P VIS A ++ GG +Y WG + + D
Sbjct: 221 DIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVD 280
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + L + + + N H V +D +WG + G+LGYG S+ P+
Sbjct: 281 TQATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPR 339
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD L+G ++A H+LV+
Sbjct: 340 LVDYLKGKVFTAIASSKYHTLVL 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 37/245 (15%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
++WG QLG G++ + P V L IK A + H+V ++ G +G+ +
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 211
Query: 139 HGQLGSGSIRNE------IEPSPVRCLVS-----EVTATACGADFTVWLSSVEGASILNA 187
G+LG I P R ++S V A A TV + EG +
Sbjct: 212 GGRLGHPEFDIHSGQAAVITP---RQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYTW 266
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G + GQLG Y + D+ Q PR + +L + IV V+ HT V
Sbjct: 267 GSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAVVSDC 311
Query: 248 GYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G V+TWG G+LG+ + PR VD + + V I++ ++ G+
Sbjct: 312 GEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDGE 367
Query: 306 LYMWG 310
+Y WG
Sbjct: 368 VYTWG 372
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G +LG Q + VP RVD + ++SA +S + G++Y W
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 207
Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
G + + P +SG R + + HH V A +WG
Sbjct: 208 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 267
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LGY + A P+KV L+ +++V+ H+ V+ D
Sbjct: 268 SNREGQLGYT--SVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSD 310
>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 178/423 (42%), Gaps = 66/423 (15%)
Query: 10 VEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAG----- 64
+ EE ++KGGE+ W G L + L L+ + RF +AG
Sbjct: 8 MMEENERDKGGEV-----EIWSWGAGTDGQLGTTRLEDEHLPQLLDLP-RFSSAGPISLL 61
Query: 65 -CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C H +A+ +G+ TWGR GQLGHGD + +P V L + + AG SH+
Sbjct: 62 ACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSG 121
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL---SSV 179
V++ G G GQLG G ++ P V S+ V ACG ++ L + +
Sbjct: 122 FVSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGL 181
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G + G + GQLG D NT+ SV P+A L G I+ + +
Sbjct: 182 SGDQVYGFGSGKRGQLGVSMD---NTRSISV---------PQATVGLEGVEIISIDANGD 229
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV---ISAGSVN 296
H+ A+ + G++YTWG G+G D PR LP ++ G +
Sbjct: 230 HSAALSANGHLYTWGR-GFG-----STSDVHCPR---------CLPSSLCFTQVALGWNH 274
Query: 297 SSCTAGGGQLYMWG--------------KLKNNGDDWMYP--KPLMDLSGWNLRCMDSGN 340
GGG+++M G ++K+ ++ + + L G N+ + +G
Sbjct: 275 MLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGA 334
Query: 341 MHHFVGADSSCI--SWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMH-VISVACGYGHS 396
H + + + +WG ++G+LG G Y Q S + L G H +I V CG G +
Sbjct: 335 EHSALVTGNILVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFT 394
Query: 397 LVI 399
I
Sbjct: 395 FAI 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+++WG G G+LG +DE +P+ +D+ R + P ++++ G + G++ W
Sbjct: 22 IWSWGAGTDGQLGTTRLEDEHLPQLLDL-PRFSSAGPISLLACGGAHVLALTTDGKVVTW 80
Query: 310 GKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G+ + +GD + PK + L + + + +G H +D+ C+ + G +G+L
Sbjct: 81 GRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQL 140
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G KS P KV + HV +ACG HSLV++ T +
Sbjct: 141 GHGDC--KSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGL 181
>gi|432931000|ref|XP_004081565.1| PREDICTED: uncharacterized protein LOC101156289 [Oryzias latipes]
Length = 1512
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 30/261 (11%)
Query: 33 VGRRKGALDGNLVSP-----TRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
GR + A G SP +L P + ++AGC + + D GR + WG N
Sbjct: 60 AGRNQKAQLGQCRSPKTGSFLQLHPFCQRARVTMLSAGCSTSAALTDD--GRLFMWGDNS 117
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG- 145
GQ+G GD++ P V +K G SH+ VT G+ FG + +G+LG
Sbjct: 118 AGQIGLGDELFTAEPREVG--VGEAVKWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQV 175
Query: 146 -SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+ N P V+ ++ VT CG TV L+ G + G +YGQLGHGT
Sbjct: 176 EQLDNHRVPQRVQGVLGHVTQVCCGGQHTVVLT---GEDVFTFGGGRYGQLGHGT----- 227
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
+EA P P+ + ++ ++ACG NHT + + G +YT+G G +G+LG
Sbjct: 228 -------FLFEA-PWPKPLQHFHKCSVRQIACGENHTAVITNGGLLYTFGDGRHGKLGLT 279
Query: 265 EQK--DEWVPRRVDVFQRNNV 283
E+ +++ P F + +V
Sbjct: 280 EENFVNQFSPTLCTQFLKFHV 300
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 127/309 (41%), Gaps = 56/309 (18%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG------SGSIRNEIEPSPVRCLVSEVTATA 167
+ GR H+ V+T + G N+ QLG +GS ++ P C + VT +
Sbjct: 40 RVSCGREHSAVITAEDRVYYAGRNQKAQLGQCRSPKTGSF---LQLHPF-CQRARVTMLS 95
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G + L+ + + G GQ+G G + + A+PR +
Sbjct: 96 AGCSTSAALT--DDGRLFMWGDNSAGQIGLGDE------------LFTAEPREVGV---- 137
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEW-VPRRVDVF------- 278
GE + V+CG +H+ V G +YT+G GRLG + EQ D VP+RV
Sbjct: 138 GEAVKWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGVLGHVTQV 197
Query: 279 ----QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG--DDWMYPKPLMDLSGWN 332
Q VL E V T GGG+ +G+L + + +PKPL +
Sbjct: 198 CCGGQHTVVLTGEDVF---------TFGGGR---YGQLGHGTFLFEAPWPKPLQHFHKCS 245
Query: 333 LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+R + G H V + + ++G ++G+LG + P HV SV+C
Sbjct: 246 VRQIACGENHTAVITNGGLLYTFGDGRHGKLGLTEENFVNQFSPTLCTQFLKFHVQSVSC 305
Query: 392 GYGHSLVIV 400
G H LV+
Sbjct: 306 GDHHMLVLA 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDR-PTIVSELSKYK 111
VG +++V+ C + H V V G YT+G + G+LG +++ R P V + +
Sbjct: 137 VGEAVKWVS--CGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGVLGH- 193
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV----RCLVSEVTAT 166
+ + G HTVV+T + + FG ++GQLG G+ E P P+ +C V ++
Sbjct: 194 VTQVCCGGQHTVVLTGE-DVFTFGGGRYGQLGHGTFLFEAPWPKPLQHFHKCSVRQI--- 249
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG + T +++ G + G ++G+LG +N N Q P
Sbjct: 250 ACGENHTAVITN--GGLLYTFGDGRHGKLGLTEENFVN------------QFSPTLCTQF 295
Query: 227 AGETIVKVACGTNHTVAV 244
+ V+CG +H + +
Sbjct: 296 LKFHVQSVSCGDHHMLVL 313
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
T++ C T + A+ G ++ WG G++G ++ PR V V EAV
Sbjct: 92 TMLSAGCST--SAALTDDGRLFMWGDNSAGQIGLGDELFTAEPREVGVG--------EAV 141
Query: 290 --ISAGSVNSSCTAGGGQLYMWGKLKN--------NGDDWMYPKPLMDLSGWNLRCMDSG 339
+S G+ +S+ G LY +G+ N D+ P+ + + G ++ + G
Sbjct: 142 KWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGVLG-HVTQVCCG 200
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H V ++G +YG+LG+G + ++ PK + V +ACG H+ VI
Sbjct: 201 GQHTVVLTGEDVFTFGGGRYGQLGHGTFLFEA-PWPKPLQHFHKCSVRQIACGENHTAVI 259
Query: 400 VD 401
+
Sbjct: 260 TN 261
>gi|334185062|ref|NP_001189802.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640473|gb|AEE73994.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1099
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P R+ L G I+ V+A H VA+ G YTWG G+LGH G
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++S L ++K A + HTV+ TE G+ +G N+ GQLG S+ + P V L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ A + T +S + + G + GQLG+GT N +
Sbjct: 295 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 340
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ +A HT+ + + G VYTW GHR PRRV +
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHRLV----TPRRVIISR 388
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
F R L A I+AG V+S A G + W
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 432
Query: 327 DLSGWNLRCMDSGNMH 342
S NLRC ++H
Sbjct: 433 --SDSNLRCQQLHSLH 446
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P + +L G I V+ H+VA+ + G VYTWGFG GRLGH E
Sbjct: 173 VQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------F 223
Query: 276 DVFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGD 317
D+ + V+ P VIS A ++ GG +Y WG + + D
Sbjct: 224 DIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVD 283
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + L + + + N H V +D +WG + G+LGYG S+ P+
Sbjct: 284 TQATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPR 342
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD L+G ++A H+LV+
Sbjct: 343 LVDYLKGKVFTAIASSKYHTLVL 365
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 37/249 (14%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G++ + P V L IK A + H+V ++ G +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTW 210
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVS-----EVTATACGADFTVWLSSVEGAS 183
G+ + G+LG I P R ++S V A A TV + EG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITP---RQVISGLGSRRVKAVAAAKHHTVI--ATEGGD 265
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G + GQLG Y + D+ Q PR + +L + IV V+ HT
Sbjct: 266 VYTWGSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAV 310
Query: 244 VDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
V G V+TWG G+LG+ + PR VD + + V I++ ++
Sbjct: 311 VSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLR 366
Query: 302 GGGQLYMWG 310
G++Y WG
Sbjct: 367 NDGEVYTWG 375
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G +LG Q + VP RVD + ++SA +S + G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 210
Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
G + + P +SG R + + HH V A +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LGY + A P+KV L+ +++V+ H+ V+ D
Sbjct: 271 SNREGQLGYT--SVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSD 313
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIK 113
D++ C H A+ G+ ++WG+N+ GQLG HG I P I+ L
Sbjct: 136 DVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFA 193
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
+ AG +H+ +T G +G NK GQLG + P+ ++ L S+ V +CG D
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDH 253
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
T L+ G AG YGQLGH + N + PR + L G +
Sbjct: 254 TAALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EINPRKVFELMGNIVT 297
Query: 233 KVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHR 264
+++CG HT+A S G +Y++G GG G+LG R
Sbjct: 298 QISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTR 330
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V + +G YT G N+ GQLGH R +P V L I G SHT
Sbjct: 39 VGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKP--RKKPEHVVALDAQIIVAVSGGESHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G ++G GQLG + + P ++CL ++ ACG + LS +
Sbjct: 97 LALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G + + G Q+GQLG G SS+ P+ I +L G +++ G H
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHG------SSIS-------TPQIIQSLQGIPFAQLSAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ A+ G V+ WG +G+LG + D W P + + V+ +S G +++
Sbjct: 202 SFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVI----YVSCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CI 352
G ++ +G+L +N + + P+ + +L G + + G H SS
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG + S P K
Sbjct: 318 SFGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAG 188
L +G +GQLG G I EI P +C +V CG TV+L ++ ++ G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFL--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH + + +P + AL + IV V+ G +HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+++WG G G+LG ++ VPR + + A ++ G +S + GGQ++
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQI----AQVACGYRHSHALSKGGQVF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG+ L +G P+ + L G + +G H F + + WG ++
Sbjct: 160 SWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG + P + L VI V+CG H+
Sbjct: 220 GQLGLNDTNDR--WFPALLKSLRSQRVIYVSCGEDHT 254
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 138/328 (42%), Gaps = 32/328 (9%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K+ G G HTV + +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
GQLG R +P V L +++ G + + L+ + I + GL GQLG
Sbjct: 64 GQLGHEKPRK--KPEHVVALDAQIIVAVSGGE-SHTLALNDKGQIFSWGLGSDGQLG--- 117
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
N + V++ PR I L+ I +VACG H+ A+ G V++WG +G
Sbjct: 118 ---LNNFEECVRV-------PRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFG 167
Query: 260 RLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
+LG P+ + Q P A +SAG +S G ++ WG+ K
Sbjct: 168 QLGLGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223
Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKS 371
N+ +D +P L L + + G H + + ++G YG+LG+ +
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEI 283
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P+KV L G V ++CG H+L
Sbjct: 284 N--PRKVFELMGNIVTQISCGRQHTLAF 309
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGG++ G + +G G ++ +P ++ L G+ ++AG H A+ + G
Sbjct: 154 KGGQVFSWGQNQFGQLGL--GMHGSSISTPQIIQSLQGIPFAQLSAG--GAHSFAITLSG 209
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WGRN+ GQLG D R P ++ L ++ G HT +T++G FG
Sbjct: 210 AVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAG 269
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG S +EI P V L+ + VT +CG T+ + G + + GL GQLG
Sbjct: 270 GYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSG-KMYSFGLGGNGQLG 328
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 157/392 (40%), Gaps = 49/392 (12%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G + D P + +D++ +A G H V G ++WG L
Sbjct: 237 DVLGSMLDSEDIPKALPRLVASTTMLDVQSIACG--ENHAAIVTKLGEVFSWGNESSRTL 294
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIR 148
GH P +V L+ +K G HT VT G L + G ++ G L + R
Sbjct: 295 GHQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYER 354
Query: 149 NEIEPS----PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
N+ P P+ + V+ ACG T ++S + G +G LGHG
Sbjct: 355 NQWSPHKLFGPMDSI--SVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDK---- 406
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWG 254
+ RP+ + +L G + VACG HT AV G ++TWG
Sbjct: 407 ----------QGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWG 456
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G+LGH ++K + VP VD+ + L +S G+ + G ++ G K+
Sbjct: 457 DADRGKLGHADKKIKLVPTCVDLLTSYDFLQ----VSCGAALTVVLTSTGVVFTIGSSKH 512
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPY 367
+ D L +R + SG+ H + +WG G+LG G Y
Sbjct: 513 GQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDY 572
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+SS P V+ L+G HV S+ACG S +
Sbjct: 573 DNRSS--PTLVEALQGRHVQSIACGSNFSAAV 602
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 20 GELLFCGSTCWDAVGRRKGALDG----NLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVD 74
GELL W R G L N SP +L P+ + + +A G H +
Sbjct: 333 GELLE-----WSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACG--EWHTAIIT 385
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-- 132
G+ +T+G G LGHGDK RP V L ++K G HT V E +S
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNC 445
Query: 133 ------AFGWN--KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS 183
F W G+LG + ++ P+ V L S + +CGA TV L+S
Sbjct: 446 NAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTST--GV 503
Query: 184 ILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G ++GQLG H T + ++K E + +++ G++H
Sbjct: 504 VFTIGSSKHGQLGNPHADGESICTVEGTLK----------------NEFVREISSGSSHV 547
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ KG V+TWG G G+LG + + P V+ Q +V
Sbjct: 548 AVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHV 589
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR +A+ + +ACG NH V G V++WG LGH+ P+ V+
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALA 312
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-------GKLKN--NGDDWMYPKPLMDLSG 330
+V ++ GS ++ G+L W G L N + W K +
Sbjct: 313 SVHV----KAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDS 368
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H + + ++G +G LG+G ++ A PK+V+ L+G+ V SV
Sbjct: 369 ISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DKQGIARPKEVESLKGLRVKSV 426
Query: 390 ACGYGHSLVIVDRTN 404
ACG H+ +V+ T+
Sbjct: 427 ACGPWHTAAVVEVTS 441
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 11 EEETGKEKGGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
+E T G LF GS W +G A + PT ++ L ++FVA C H
Sbjct: 89 DEHTAITTGNNKLFMFGSNNWGQLGLGSKA---TVNKPTCIKALKPEKVKFVA--CGRNH 143
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTED 128
+ + G+ Y G N GQLG GD +R ++S S++KIK+ AG + + +T +
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAE 203
Query: 129 GNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G FG + G+LG + N P V + +V ACG TV L+ ++
Sbjct: 204 GELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTE---KAVYT 260
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
GL Q+GQLG GT +E P+ I ++ + I V CG NHT +
Sbjct: 261 FGLGQFGQLGLGT------------FTFETS-EPKVIESVKDKKISHVCCGENHTALITE 307
Query: 247 KGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQR 280
G +YT+G G +G+ LG +++VP F +
Sbjct: 308 SGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLK 343
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLG G+ N +P I AL E + VACG NHT+ + G VY
Sbjct: 109 WGQLGLGSKATVN--------------KPTCIKALKPEKVKFVACGRNHTLILTGGGQVY 154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
G G+LG + + + F + + +SAGS S+ G+LY +G+
Sbjct: 155 ATGGNNEGQLGLGDTDERSAFHLISFFTSQHKI---KQLSAGSNTSAALTAEGELYTFGE 211
Query: 312 LKNNGDDWMYPKPLMD------LSGWNLRCMD--SGNMHHFVGADSSCISWGHAQYGELG 363
+G + PK L++ + G + + + G H V + + ++G Q+G+LG
Sbjct: 212 -PESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLG 270
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G + ++S PK ++ ++ + V CG H+ +I +
Sbjct: 271 LGTFTFETSE-PKVIESVKDKKISHVCCGENHTALITE 307
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIK 113
G+ + + C H V + E YT+G + GQLG G + P ++ + KI
Sbjct: 235 GISEKVIQVACGGGHTVVL-TEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKIS 293
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVT-ATACG 169
G +HT ++TE G FG +HG+LG G + N+ P+ + + ACG
Sbjct: 294 HVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACG 352
>gi|30678939|ref|NP_187029.2| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640472|gb|AEE73993.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1078
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P R+ L G I+ V+A H VA+ G YTWG G+LGH G
Sbjct: 174 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 231
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++S L ++K A + HTV+ TE G+ +G N+ GQLG S+ + P V L
Sbjct: 232 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 291
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+++ A + T +S + + G + GQLG+GT N +
Sbjct: 292 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 337
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ +A HT+ + + G VYTW GHR PRRV +
Sbjct: 338 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHRLV----TPRRVIISR 385
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
F R L A I+AG V+S A G + W
Sbjct: 386 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 429
Query: 327 DLSGWNLRCMDSGNMH 342
S NLRC ++H
Sbjct: 430 --SDSNLRCQQLHSLH 443
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P + +L G I V+ H+VA+ + G VYTWGFG GRLGH E
Sbjct: 170 VQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------F 220
Query: 276 DVFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGD 317
D+ + V+ P VIS A ++ GG +Y WG + + D
Sbjct: 221 DIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVD 280
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + L + + + N H V +D +WG + G+LGYG S+ P+
Sbjct: 281 TQATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPR 339
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD L+G ++A H+LV+
Sbjct: 340 LVDYLKGKVFTAIASSKYHTLVL 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 37/245 (15%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
++WG QLG G++ + P V L IK A + H+V ++ G +G+ +
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 211
Query: 139 HGQLGSGSIRNE------IEPSPVRCLVS-----EVTATACGADFTVWLSSVEGASILNA 187
G+LG I P R ++S V A A TV + EG +
Sbjct: 212 GGRLGHPEFDIHSGQAAVITP---RQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYTW 266
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G + GQLG Y + D+ Q PR + +L + IV V+ HT V
Sbjct: 267 GSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAVVSDC 311
Query: 248 GYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G V+TWG G+LG+ + PR VD + + V I++ ++ G+
Sbjct: 312 GEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDGE 367
Query: 306 LYMWG 310
+Y WG
Sbjct: 368 VYTWG 372
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G +LG Q + VP RVD + ++SA +S + G++Y W
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 207
Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
G + + P +SG R + + HH V A +WG
Sbjct: 208 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 267
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ G+LGY + A P+KV L+ +++V+ H+ V+ D
Sbjct: 268 SNREGQLGYT--SVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSD 310
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 151/358 (42%), Gaps = 36/358 (10%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV V+AG H +A+ +G Y WG N GQLG+ + P +VS
Sbjct: 46 LPGVVFTQVSAGI--NHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTF 103
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSEVTATACGA 170
+ AG H++ V DGN+ A+G N G+LG+G+ P V + S VT + A
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMA 163
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
L+ I + G + GQLG GT T SSV L A P AG T
Sbjct: 164 GGFHSLAVGSNGDIYSWGYNRSGQLGDGT-----TLASSVPLKVSAGAVP------AGVT 212
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV- 289
+V+ G H++A+ S G Y WG G+LG P V P V
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSA--------PAGVS 264
Query: 290 ---ISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN 340
+SAG ++S G+ Y W G+L N + P + + G + + +G
Sbjct: 265 FTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGA 324
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
H +GAD + +WG G+LG +S +P V +G+ + G HSL
Sbjct: 325 DHSLAIGADGNAYAWGLNVNGQLGNNTI--TTSTVPVMVTAPDGVTFTRIEAGGLHSL 380
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 158/365 (43%), Gaps = 59/365 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCY-----TWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
F A V+ + V + G + T+G G G + P +V
Sbjct: 2 FSFRVASVVALSALLVGMSGSAFAAPAETFGS---GPTAGGTTVSGVLPGVV-------F 51
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-----EVTATA 167
+ AG +H++ + DGN A+G+N GQLG+ SI N S V LVS T +
Sbjct: 52 TQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILN----SSVPVLVSTPDGVTFTQVS 107
Query: 168 CGADFTVWLSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
GAD ++ + S +G NA G G+LG+GT + SSV L A P
Sbjct: 108 AGADHSLAVGS-DG----NAYAWGRNTDGRLGNGT-----STGSSVPLLVSAGAVP---- 153
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+G TI +V G H++AV S G +Y+WG+ G+LG VP +V +
Sbjct: 154 --SGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSA----GAV 207
Query: 285 PPEAV---ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM--DLSGWNLRC 335
P +SAG +S G+ Y WG+ + G P P + +G +
Sbjct: 208 PAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ 267
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ +G++H VG+D +WG+ G+LG SS P V + G+ V V+ G
Sbjct: 268 VSAGDLHSLAVGSDGKAYAWGNNDSGQLGNAT--TTSSLAPVLVSPMGGLAVTQVSAGAD 325
Query: 395 HSLVI 399
HSL I
Sbjct: 326 HSLAI 330
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 138/335 (41%), Gaps = 56/335 (16%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE---LSKYK 111
GV V+AG H +AV +G Y WGRN G+LG+G P +VS S
Sbjct: 100 GVTFTQVSAGA--DHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVT 157
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP-------SPVRCLVSEVT 164
I + AG H++ V +G+ ++G+N+ GQLG G+ P P S+V+
Sbjct: 158 ISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVS 217
Query: 165 A-----TACGAD--FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
A A G++ W G + GQLG G+ +
Sbjct: 218 AGDRHSLAIGSNGKTYAW------------GEARGGQLGIGSISR--------------T 251
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P P ++A AG + +V+ G H++AV S G Y WG G+LG+ P V
Sbjct: 252 PAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSP 311
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGW 331
V +SAG+ +S G Y WG +L NN P + G
Sbjct: 312 MGGLAVTQ----VSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGV 367
Query: 332 NLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYG 365
+++G +H A D + +WG +G+LG G
Sbjct: 368 TFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNG 402
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G+ Y WG GQLG G + P +VS + + AG H++ V D
Sbjct: 222 HSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSD 281
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEP---SPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G + A+G N GQLG+ + + + P SP+ L VT + GAD ++ + + +G
Sbjct: 282 GKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGL--AVTQVSAGADHSLAIGA-DG---- 334
Query: 186 NA---GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
NA GL GQLG+ NT +S P + A G T ++ G H++
Sbjct: 335 NAYAWGLNVNGQLGN------NTITTSTV--------PVMVTAPDGVTFTRIEAGGLHSL 380
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
S YTWG +G+LG+ VP + F
Sbjct: 381 TAASDENTYTWGANSFGQLGNGTSDGSLVPVAISRF 416
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + GV V+AG H +AV +G+ Y WG N+ GQLG+ P +VS
Sbjct: 253 APALVSAPAGVSFTQVSAG--DLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVS 310
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--- 162
+ + + AG H++ + DGN+ A+G N +GQLG N I S V +V+
Sbjct: 311 PMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLG----NNTITTSTVPVMVTAPDG 366
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
VT T A L++ + G +GQLG+GT +
Sbjct: 367 VTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSD 405
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + P+ G+ + V+AG H +A+ +G Y WG N GQLG+ P +V
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGA--DHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMV 361
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSE 162
+ + AG H++ D N+ +G N GQLG+G+ + P + +++E
Sbjct: 362 TAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAISRFPVITE 421
Query: 163 VT 164
V+
Sbjct: 422 VS 423
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 159/377 (42%), Gaps = 49/377 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 306 PKALESAVVLDVQNIA--CGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEA 363
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
LS I+ G HT VT G+ +G +N G LG G+ + P V +
Sbjct: 364 LSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGI 422
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V++ +CG T +SS + G +G LGHG S+ L PR
Sbjct: 423 HVSSISCGPWHTAVVSS--AGQLFTFGDGTFGVLGHGDRK-------SISL-------PR 466
Query: 222 AIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDE 269
+ +L G V+ ACG HT AV S G ++TWG G GRLGH +++ +
Sbjct: 467 EVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 526
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKP 324
VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 527 LVPTCVSAL----VEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPAR 582
Query: 325 LM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ LS ++ + G H + + + +WG G LG+G K+ +P V+ L+
Sbjct: 583 VEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKN--LPSLVEALK 640
Query: 383 GMHVISVACGYGHSLVI 399
V S+ACG + I
Sbjct: 641 DKQVKSIACGTNFTAAI 657
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P R+ PL G+ + ++ C H V G+ +T+G G LGHGD+
Sbjct: 404 GNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS 461
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 462 ISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 521
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
++ P+ V LV ACG T+ + + G P YGQLG+
Sbjct: 522 DKEAKLVPTCVSALVEPNFCQVACGHSLTI--ARTTSGHVYTMGSPVYGQLGN------- 572
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
S KL R L+ ++ ++ACG H + SK VYTWG G GRLGH
Sbjct: 573 -PQSDGKLP------ARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625
Query: 265 EQKDEWVPRRVDVFQRNNV 283
+ D+ +P V+ + V
Sbjct: 626 DTDDKNLPSLVEALKDKQV 644
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G +++WG GRLGH D P+ ++
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 366 NTNI----EFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 421
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G +KS ++P++V+ L+G+ +
Sbjct: 422 IHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG--DRKSISLPREVESLKGLRTVQA 479
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 480 ACGVWHTAAVVE 491
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G L ++ +P + L GV + ++AG H +A+ + G
Sbjct: 64 KGGELFAWGQNLHGQLG--IGRLFASIPTPQLVEHLSGVPLVQISAG--KAHSMALSMSG 119
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G + P++V L K++ G SHT ++TEDG FG
Sbjct: 120 NIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAG 179
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
KHGQLG S +NE+ P V L VT ACG T+ S G + + G + GQLG
Sbjct: 180 KHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 238
Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
+ GT N+ S+ L +E++ + + +AG
Sbjct: 239 NGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAG 275
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P +V LS + + AG+
Sbjct: 50 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGK 109
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G E PS V L S+ V ACG T L+
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT- 168
Query: 179 VEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
E + G ++GQLGH T NE RPR + L G + +VACG
Sbjct: 169 -EDGQVFTFGAGKHGQLGHNSTQNEL---------------RPRLVTELTGIRVTQVACG 212
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
HT+A V G V+++G G G+LG+ ++ +P
Sbjct: 213 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 248
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTAT 166
K KI G H ++++ DG + ++ IE + +C++ E +
Sbjct: 6 KMKIHSVDQGAEHMLILSSDGKPFEYNYS-------------IEHARFQCILQEKSIIQI 52
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
CG ++ LS +G + G +GQLG G + + P P+ + L
Sbjct: 53 TCGDYHSLALS--KGGELFAWGQNLHGQLGIGR-------------LFASIPTPQLVEHL 97
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G +V+++ G H++A+ G +Y+WG G+LG E P V+ V
Sbjct: 98 SGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV--- 154
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN 340
++ G +++ GQ++ +G K N+ + + P+ + +L+G + + G
Sbjct: 155 -EFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGR 213
Query: 341 MHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
H +V S+G + G+LG G + +P K+
Sbjct: 214 RHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 253
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N HGQLG G + I P+P LV ++
Sbjct: 44 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASI-PTPQ--LVEHLSGV 100
Query: 167 -----ACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRP 220
+ G ++ LS +I + G GQLG G TD E P
Sbjct: 101 PLVQISAGKAHSMALSM--SGNIYSWGRNDLGQLGLGHTDGE---------------EFP 143
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ AL + + +ACG +HT + G V+T+G G +G+LGH ++E PR V
Sbjct: 144 SLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLV 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R L ++I+++ CG H++A+ G ++ WG +G+LG R P+ V+
Sbjct: 39 RFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVE--H 96
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNG----DDWMYPKPLMDLSGWNL 333
+ V P ISAG +S + G +Y WG+ L G D +P + L +
Sbjct: 97 LSGV--PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV 154
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + D ++G ++G+LG+ ++ P+ V L G+ V VACG
Sbjct: 155 EFLACGGSHTALLTEDGQVFTFGAGKHGQLGHN--STQNELRPRLVTELTGIRVTQVACG 212
Query: 393 YGHSLVIV 400
H+L V
Sbjct: 213 RRHTLAYV 220
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 153/338 (45%), Gaps = 38/338 (11%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG G+LG G ++ Q P + ++ + G SHT+ +T++G A G N
Sbjct: 4 YCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNN 63
Query: 138 KHGQLGS--GSIRNEIEP--SPVRCLVSE----VTATACGADFTVWLSSVEGASILNAGL 189
HGQLG ++ N+ P S + L S +T +CG ++ L++ + + G
Sbjct: 64 DHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTN--WGQVFSWGS 120
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
GQLGH +N QP PR I A+ + +V++A G H +A+ + G
Sbjct: 121 NAVGQLGHDAEN-------------GRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGE 167
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+Y WG YG+LG ++ VP + V P A I+ G +S + G ++ W
Sbjct: 168 LYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGV--PIAFIACGGNHSFAVSKSGAIFGW 224
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGEL 362
GK N+ + YP L L +R + G + F+ + + G +G+L
Sbjct: 225 GKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQL 284
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G+G + +P+KV L G + +ACG H+L V
Sbjct: 285 GHG--SCSNEIVPRKVFELMGSKITQIACGRRHTLAFV 320
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G G + PT ++ L GV I F+A G H AV G
Sbjct: 166 GELYAWGSNSYGQLG--IGTTSEKVPMPTLIQSLAGVPIAFIACG--GNHSFAVSKSGAI 221
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D R PT + L ++ G +V +T +G G
Sbjct: 222 FGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTF 281
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG GS NEI P V L+ S++T ACG T+ G I GL GQLG G
Sbjct: 282 GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLGGVGQLGIG 340
Query: 199 TDNEYNT 205
++T
Sbjct: 341 MVGNHST 347
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+LR L + +R+++ G V + EG +T G GQLGHG P V E
Sbjct: 243 PTQLRTLRSLGVRYISCG--DDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFE 300
Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L KI + GR HT+ V G FG GQLG G + N P VR
Sbjct: 301 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 352
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 23/173 (13%)
Query: 250 VYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+Y WG +G LG E++ VPR++D Q + V+ E G+ ++ G++Y
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVEC----GTSHTLFLTKEGKMY 58
Query: 308 MWG-----KLKNNGDDWMYPKP-------LMDLSGWNLRCMDSGNMHHFVGAD-SSCISW 354
G +L ++ D +P L L + + C+ G H + SW
Sbjct: 59 ACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSW 118
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
G G+LG+ + P+ + + HV+ +A G H L + TN GE
Sbjct: 119 GSNAVGQLGHDAENGRQPT-PRMIKAIGAKHVVQIASGQYHCLAL---TNNGE 167
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 172/356 (48%), Gaps = 48/356 (13%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIVSELSKYKIKKAGA 117
VAAG +A+ +G ++WG N GQLG G + PT V L K A
Sbjct: 985 MVAAG--GNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAA 1040
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
G +H + + DG+ ++G+N GQLG SG+ + P + +S V A ACG +
Sbjct: 1041 GDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINA-ISNVAAIACGGSHS- 1098
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ S+ + G YGQLG G DN T P+ + A++ + +
Sbjct: 1099 -LAVARDGSLWSWGYNYYGQLGLG-DNYSKTT-------------PQKVNAIS--NVAAI 1141
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G +++A+ G V++WG G+LG + +D P++V+V NV A I+AG
Sbjct: 1142 AAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS--NV----AAIAAGE 1195
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+S G ++ WG+ L +N DD P+P+ +S N++ + +GN H F +
Sbjct: 1196 DHSLALTRDGSVWSWGRNSRGQLGLDDN-DDRNTPQPVTTIS--NIKAIAAGNSHSFAIS 1252
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSA-MPKKVDILEGMHVISVACGYGHSLVIVD 401
+ +WG+ G+LG G G ++ P+KV ++ +V+ ++ G HSL + +
Sbjct: 1253 EEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTE 1306
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 48 TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
T RP I VAA C H +A+ +G ++WG N GQLG GD + + P V+
Sbjct: 586 TENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNA 645
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS + AG H++ +T DG+ ++G N +GQLG G + P V +S V A
Sbjct: 646 LS--NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNA-ISNVVAI 702
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G + L+ S+ + G GQLG G +++ NT P+P +
Sbjct: 703 AAGYRHS--LALTRDGSVWSWGNNTRGQLGLGDNDDRNT------------PQPVTTIS- 747
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNV 283
I +A G N+++A+ +G V+ WG+ G+LG H DE P++V V NV
Sbjct: 748 ---NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVIS--NV 802
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ +SAGS +S G L+ WG
Sbjct: 803 VG----LSAGSSHSIALTEDGALWAWGN 826
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 143/341 (41%), Gaps = 64/341 (18%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ +G + WGRN+ QLG GD I R P +S I AGR ++ + D
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSN--IVSVAAGRLFSLALASD 135
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ A+G N +GQLG G N + PS L S+V A A G D+ L++ + + G
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL-SDVAAIA-GGDYHA-LAATQSGEVWAMG 192
Query: 189 LPQYGQLGHGTDN-------------------EYNT----KDSSV-------------KL 212
+GQLG D+ E+ + D +V +
Sbjct: 193 RNDHGQLGFTGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGI 252
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
A EA P IA L+ I +A G H +A+ G V+ WG G G+LG + + P
Sbjct: 253 AGEAVATPAPIAVLS--NITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD---------DWMYPK 323
RV + L I++G +S G L+ WG NNGD D P
Sbjct: 311 GRV------SSLADVTAIASGWFHSLALTSDGVLWAWG---NNGDGRLGTDATSDQSLPA 361
Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
+ +S N G H + AD S SWG YG+LG
Sbjct: 362 QVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 23/240 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+P ++ L V VA H +A+ ++G ++WG N GQLG GD R+ P V
Sbjct: 638 TTPRKVNALSNV----VAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKV 693
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
+ +S + AG H++ +T DG+ ++G N GQLG G + P PV +S +
Sbjct: 694 NAIS--NVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTT-ISNIK 750
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G ++++ +S E + G GQLG GT LA E P+ +
Sbjct: 751 AIAVGNNYSIAIS--EEGLVWAWGYNCSGQLGIGTHG---------SLADENTPQKVIVI 799
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+ +V ++ G++H++A+ G ++ WG G++ E+ E++ V VFQ V
Sbjct: 800 S----NVVGLSAGSSHSIALTEDGALWAWGNNEAGQIA-AEEAIEYIDNPVQVFQSGEVF 854
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 48 TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
T+ RP I VAA C H +AV +G ++WG N GQLG GD + P V+
Sbjct: 1075 TKNRPQKINAISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNA 1134
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
+S + AG +++ +T DG+ ++G N GQLG G + P V L S V A
Sbjct: 1135 IS--NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVL-SNVAAI 1191
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G D + L+ S+ + G GQLG +++ NT P+P +
Sbjct: 1192 AAGEDHS--LALTRDGSVWSWGRNSRGQLGLDDNDDRNT------------PQPVTTIS- 1236
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNV 283
I +A G +H+ A+ +G + WG+ G+LG +E P++V V NV
Sbjct: 1237 ---NIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NV 1291
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ +S G+ +S G L+ WG
Sbjct: 1292 VG----LSGGNYHSLALTEDGALWAWGD 1315
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---IQRD 99
N+ +PT++ L +AAG H +A+ +G ++WG N GQLG G ++
Sbjct: 1022 NVFTPTKVDALPPA--AKIAAG--DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKN 1077
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
RP ++ +S + G SH++ V DG+ ++G+N +GQLG G ++ P V
Sbjct: 1078 RPQKINAIS--NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNA- 1134
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+S V A A G ++ L+ S+ + G GQLG G + + NT
Sbjct: 1135 ISNVAAIAAGEYYS--LALTRDGSVWSWGDNSDGQLGLGDNEDRNT-------------- 1178
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + L+ + +A G +H++A+ G V++WG G+LG + D P+ V
Sbjct: 1179 PQKVEVLS--NVAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTIS 1236
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
N+ I+AG+ +S + G + WG
Sbjct: 1237 --NI----KAIAAGNSHSFAISEEGLAWAWG 1261
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRP 101
N ++P++ L D+ +A G H +A G + GRN+ GQLG GD D P
Sbjct: 156 NRLTPSKTPGLS--DVAAIAGG--DYHALAATQSGEVWAMGRNDHGQLGFTGD--HADAP 209
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLV 160
V+ LS +K AG ++ + DG A+G N+ QLG+G + P+P+ L
Sbjct: 210 VQVAGLSN--VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVL- 266
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
S +TA A G + L+ E S+ G GQLG G +E P
Sbjct: 267 SNITAIAAGRRHAMALA--EDGSVWAWGANGSGQLGFGD--------------FETPKAP 310
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+++LA + +A G H++A+ S G ++ WG G GRLG D+ +P +V
Sbjct: 311 GRVSSLA--DVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISN 368
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ G +S A G ++ WG
Sbjct: 369 ------AVSFAGGQRHSLAIAADGSVWSWG 392
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 156/345 (45%), Gaps = 46/345 (13%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+A+ +G ++WG N GQLG G D PT V L AG G H + + D
Sbjct: 505 LALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGG--HALALASD 562
Query: 129 GNSLAFGWNK---HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
G+ ++G N G G+ E P + +S V A ACG + L+ S
Sbjct: 563 GSVWSWGRNSVGQLGLGTGGTYSTENRPQKINA-ISNVAAIACGGSHS--LALARDGSFW 619
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G YGQLG G DN T PR + AL+ +V +A G H++A+
Sbjct: 620 SWGYNYYGQLGLG-DNVSKTT-------------PRKVNALS--NVVAMAAGDRHSLALT 663
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G +++WG YG+LG + PR+V N + I+AG +S G
Sbjct: 664 LDGSLWSWGDNTYGQLGLGDNDHRNTPRKV------NAISNVVAIAAGYRHSLALTRDGS 717
Query: 306 LYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
++ WG L +N DD P+P+ +S N++ + GN + ++ + +WG+
Sbjct: 718 VWSWGNNTRGQLGLGDN-DDRNTPQPVTTIS--NIKAIAVGNNYSIAISEEGLVWAWGYN 774
Query: 358 QYGELGYGPYGQKSSA-MPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G +G + P+KV ++ +V+ ++ G HS+ + +
Sbjct: 775 CSGQLGIGTHGSLADENTPQKVIVIS--NVVGLSAGSSHSIALTE 817
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 163/384 (42%), Gaps = 58/384 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P R+ L D+ +A+G H +A+ +G + WG N G+LG + P VS
Sbjct: 309 APGRVSSLA--DVTAIASGWF--HSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVS 364
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+S + AG G+ H++ + DG+ ++G N +GQLG S+ +PV L S
Sbjct: 365 SISN-AVSFAG-GQRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYS---- 418
Query: 166 TACGADF------------TVWLSSVEGASILNAG-----LPQYGQLGHGTDNEYNTKDS 208
G DF +W +G L+ + GQ D + D
Sbjct: 419 ---GEDFHLFYDTDGDGAANIWDDDDDGDGFLDESDNCPCVSNPGQEDEDGDGTGDFCDG 475
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG--FGGYGRLGHREQ 266
++ QP G VA G ++A+ + G V++WG G LG E
Sbjct: 476 CPGDFFKIQPGFSG----CGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGEN 531
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMY- 321
D + P VD LP A I+AG ++ A G ++ WG+ G Y
Sbjct: 532 DDVFTPTNVD------ALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYS 585
Query: 322 ----PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + +S N+ + G H A D S SWG+ YG+LG G K++ P+
Sbjct: 586 TENRPQKINAIS--NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT--PR 641
Query: 377 KVDILEGMHVISVACGYGHSLVIV 400
KV+ L +V+++A G HSL +
Sbjct: 642 KVNALS--NVVAMAAGDRHSLALT 663
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
+++ VAAG +A+ +G + WG NE QLG G + P ++ LS I
Sbjct: 217 NVKSVAAG--EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSN--ITAI 272
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
AGR H + + EDG+ A+G N GQLG G P V L ++VTA A G W
Sbjct: 273 AAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSL-ADVTAIASG-----W 326
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
S+ A + L +G G G T D S+ P +++++ V A
Sbjct: 327 FHSL--ALTSDGVLWAWGNNGDGRLGTDATSDQSL---------PAQVSSIS--NAVSFA 373
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLG 262
G H++A+ + G V++WG YG+LG
Sbjct: 374 GGQRHSLAIAADGSVWSWGGNAYGQLG 400
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L ++ +AAG H +A+ +G ++WGRN RGQLG D R+ P V+
Sbjct: 1178 TPQKVEVLS--NVAAIAAG--EDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVT 1233
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSE 162
+S IK AG SH+ ++E+G + A+G+N GQLG SGS+ NE P V+ + +
Sbjct: 1234 TIS--NIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV 1291
Query: 163 V 163
V
Sbjct: 1292 V 1292
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVIS 291
VA G N ++A+ + G +++WG G G+LG + + + P +VD LPP A I+
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVD------ALPPAAKIA 1039
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN----GDDWMY-----PKPLMDLSGWNLRCMDSGNMH 342
AG ++ A G ++ WG + G Y P+ + +S N+ + G H
Sbjct: 1040 AGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS--NVAAIACGGSH 1097
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V D S SWG+ YG+LG G K++ P+KV+ + +V ++A G +SL +
Sbjct: 1098 SLAVARDGSLWSWGYNYYGQLGLGDNYSKTT--PQKVNAIS--NVAAIAAGEYYSLAL-- 1151
Query: 402 RTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKK 437
T G D DG+ DNE DRN+ P+K
Sbjct: 1152 -TRDGSVWSWGDNSDGQLGLGDNE--DRNT---PQK 1181
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 51 RPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSE 106
+P+ + +I+ +AAG + H A+ EG + WG N GQLG G + P V
Sbjct: 1230 QPVTTISNIKAIAAG--NSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKV 1287
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIE 152
+S + G H++ +TEDG A+G N GQ+GS G +N ++
Sbjct: 1288 ISN--VVGLSGGNYHSLALTEDGALWAWGDNDDGQIGSTGGDRKNPVQ 1333
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 143/350 (40%), Gaps = 80/350 (22%)
Query: 52 PLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
P+ G+ DI VAAG H +AV +G +TWG N GQLG G R P V+ LS
Sbjct: 77 PVPGLSDIVSVAAG--GAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGV 134
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ G G H++ + DG A+G N+ GQLG G+ + P P+ L S V + A G
Sbjct: 135 RAVATGLG--HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGL-SGVRSVAAGG 191
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ L + ++ G YG+LG G+ + PRAI L
Sbjct: 192 FHS--LVVRDDDTVWAWGSNDYGELGDGSTSRRAV--------------PRAIPGL--RN 233
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+ VA G H++AV + G + WG YG+LG + PR
Sbjct: 234 VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPR----------------- 276
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
P+ LSG +RC+ + H + A+
Sbjct: 277 ---------------------------------PVPGLSG--VRCVATSFFHSLALRAEG 301
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +WG YGE G G + S P+ V L G V+SVA G HSL +
Sbjct: 302 TVWAWGLNGYGEQGDG-TASRQSPTPRPVPGLSG--VLSVATGTFHSLAV 348
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Query: 41 DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
DG + RP+ G+ +R VA H +A+ EG + WG N G+ G G R
Sbjct: 266 DGTFSNRATPRPVPGLSGVRCVATSFF--HSLALRAEGTVWAWGLNGYGEQGDGTA-SRQ 322
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
PT + G H++ V +G A+G N GQLG G+ + P V
Sbjct: 323 SPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK----LKNNG--DDWMYPKPLMDLSGWNLRCMDSG 339
P +SAG +S G ++ WG L+ G P P+ LS ++ + +G
Sbjct: 33 PRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVPVPGLS--DIVSVAAG 90
Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
H V AD + +WG YG+LG G + A+P +V L G V +VA G GHSL
Sbjct: 91 GAHSLAVRADGTLWTWGGNPYGQLGDGT--TTARALPVQVAGLSG--VRAVATGLGHSLA 146
Query: 399 I-VDRTNVGERLDQLDVYDGKASSQ 422
+ D T L+Q +SQ
Sbjct: 147 LRADGTVWAWGLNQFGQLGDGTTSQ 171
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 142/348 (40%), Gaps = 58/348 (16%)
Query: 85 NERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
N GQLGHG R P + + L ++ G HT V+TEDG G N GQL
Sbjct: 3 NSYGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQL 62
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
G G + + L VT CG DFT++L+ + +L+ G +GQLG G
Sbjct: 63 GLGHLTDISTLQRCLGLTQTVTNVTCGWDFTLFLT--DSGRVLSCGSNAFGQLGIGQKPA 120
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
Y T D + + +A +V VA G H++AV G VY WG G +
Sbjct: 121 Y-TADVQIVESLKA-------------AVVSVAAGLRHSLAVTDSGCVYQWGIGLMSQ-A 165
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEA---------VISAGSVNSSCTAGGGQLYMWGKLK 313
R VP + ++VLP V++AGS++ C G L++WG
Sbjct: 166 KRTLSPSPVPSHL-----SSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWG--S 218
Query: 314 NNGDDWMYPKPLMD---------LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
N + +P + L G + + SG H ++ +WG YG+LG
Sbjct: 219 NKHSQLLSSEPFLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLG 278
Query: 364 -----------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P++V L+G + CG H+L I+
Sbjct: 279 RHASTSQSSESQSTTEDQEVRLPEEVPALQG--ATQITCGSEHNLAIL 324
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 115/298 (38%), Gaps = 21/298 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
GE+ CG +G L G+L + L+ +G+ C + + GR
Sbjct: 49 GEVFVCGQ-------NHRGQLGLGHLTDISTLQRCLGLTQTVTNVTCGWDFTLFLTDSGR 101
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ G N GQLG G K + E K + AG H++ VT+ G +G
Sbjct: 102 VLSCGSNAFGQLGIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGIGL 161
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
Q + + PSPV +S V + V S+ L + G L
Sbjct: 162 MSQ-----AKRTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLW 216
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N+++ SS + + P P + L GET+++V G H VA G V+TWG G Y
Sbjct: 217 GSNKHSQLLSSEP--FLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNY 274
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC------TAGGGQLYMWG 310
G+LG + + + LP E G+ +C GG+L WG
Sbjct: 275 GQLGRHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITCGSEHNLAILGGRLLSWG 332
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 14/126 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKI----------KKAGA 117
H VA GR +TWGR GQLG H Q +E + ++ +
Sbjct: 256 HIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITC 315
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G H + + G L++GWN+HG G GS + +P V L CGA ++ +
Sbjct: 316 GSEHNLAIL-GGRLLSWGWNEHGMCGDGSHADVFQPQLVPAL--RPLLIGCGAGHSMAVC 372
Query: 178 SVEGAS 183
+ AS
Sbjct: 373 AAVAAS 378
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 55/361 (15%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G + CGS + +G+ K +P + + I V G H VAV +G
Sbjct: 52 KDGTVYTCGSNEFGQLGQEKSH-----TNPESVHAIETFTITKVTCG--KAHTVAVSDQG 104
Query: 78 RCYTWGRNERGQLGHGDKIQ---RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
+ WG N GQ+G G K++ + P ++ L+K + + G +H++ +T G+ +
Sbjct: 105 LVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCW 164
Query: 135 GWNKHGQLGSGSIRNEI-EPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G N GQLG G + + EP+PV L V + +A GA + LSS ++ G +
Sbjct: 165 GDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAH-SFALSS--SGALFGWGKNE 221
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YGQLG ++T D +P P + +L + + V+CG HT + S G V+
Sbjct: 222 YGQLG-----VHDTTD---------RPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVF 267
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQ----------RNNVLPPEAVISAGSVNSSCTA 301
T+G G G+LGH E+ PR+V R + L V S+G V +
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTL--ALVPSSGRVYTFGRG 325
Query: 302 GGGQL----------YMWGK---LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
G GQL M K L++N M P+ D + +R +D+G H F A
Sbjct: 326 GDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTVRRIDAGGDHCFAMAS 385
Query: 349 S 349
S
Sbjct: 386 S 386
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 147/332 (44%), Gaps = 31/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQR--DRPTIVSELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WG+ GQLG G+ Q P ++ L +++ G +HT + +DG G
Sbjct: 2 FCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGS 61
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N+ GQLG ++ P V + +T CG TV +S + + G YGQ+
Sbjct: 62 NEFGQLGQE--KSHTNPESVHAIETFTITKVTCGKAHTVAVS--DQGLVFAWGDNSYGQI 117
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G+ K+ + Q P+ + LA ++V++ACG NH++A+ G+++ WG
Sbjct: 118 GLGS-----------KVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGD 166
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
G+LG + + V N V P +ISAG +S + G L+ WGK +
Sbjct: 167 NSSGQLGIGKTHSS-MSEPAPVLSLNGV--PFMLISAGGAHSFALSSSGALFGWGKNEYG 223
Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYG 368
++ D P L L + + G H V +D ++G G+LG+
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHN--S 281
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+L +V
Sbjct: 282 NHHEYTPRKVFELMGSVVTQIACGRAHTLALV 313
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 36/327 (11%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC H + +G YT G NE GQLG P V + + I K G++HT
Sbjct: 40 VSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKS--HTNPESVHAIETFTITKVTCGKAHT 97
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSP--VRCLVS-EVTATACGADFTVWLSS 178
V V++ G A+G N +GQ+G GS ++ +++ P ++ L V ACG + ++ L+
Sbjct: 98 VAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI 157
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ G GQLG G + + P + +L G + ++ G
Sbjct: 158 --SGHLFCWGDNSSGQLGIGK-------------THSSMSEPAPVLSLNGVPFMLISAGG 202
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ A+ S G ++ WG YG+LG + D +P + + V +S G +++
Sbjct: 203 AHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGV----CYVSCGEKHTA 258
Query: 299 CTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSS-- 350
G ++ + G+L +N + Y P+ + +L G + + G H SS
Sbjct: 259 VLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGR 318
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKK 377
++G G+LG G +S M K
Sbjct: 319 VYTFGRGGDGQLGLGVTNNCNSPMTAK 345
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 63 AGCVS---CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
A CV+ H VA+ G+ +TWG G LGH + P +V +S KI+
Sbjct: 158 AKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSG 217
Query: 120 SHTVVVTEDGNSLAFGWNK---HGQLGSGSIRNE----IEPSPVRCLVSEVTATACGADF 172
+HT +TE G +G ++ LG G NE PS V+ L V A CG F
Sbjct: 218 THTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFF 277
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
T L+ E I N G +LG G QP+P I L G ++
Sbjct: 278 TAVLT--EEGQIWNWGANSNYELGRGNKTG------------GWQPKP--IPNLEGVRVI 321
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++A G H++A+ +G V +WGFGG+G+LGH +++ +P +D V+ I+
Sbjct: 322 QIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVV----YIAC 377
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN 315
G S+ G+LYMWG K++
Sbjct: 378 GGSTSAAITDEGKLYMWGNAKDS 400
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G L P++++ L + A C + EG+ + WG N +LG G+K +P
Sbjct: 253 GGLSIPSKVKALT---VPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQP 309
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
+ L ++ + +G H++ +T++G L++G+ HGQLG SI+N+ P + L
Sbjct: 310 KPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALAD 369
Query: 162 E-VTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLA--YEAQ 217
+ V ACG + A+I + G L +G N KDS + + E Q
Sbjct: 370 QRVVYIACGGSTS--------AAITDEGKLYMWG----------NAKDSQLGVPGLPEVQ 411
Query: 218 PRPRAIA------ALAGETIVKVACGTNHTVAV 244
P P + L ++ VA G +H + +
Sbjct: 412 PCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCL 444
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VA G H+VA+ S G V+TWG+GG+G LGH E +PR V + + ++G
Sbjct: 161 VALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKI---RHIATSG 217
Query: 294 SVNSSCTAGGGQLYMWGK-------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
+ ++ T G ++Y WG+ N G P + L+ G
Sbjct: 218 THTAAITETG-EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGF 276
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + +WG ELG G + PK + LEG+ VI +A G HSL +
Sbjct: 277 FTAVLTEEGQIWNWGANSNYELGRG--NKTGGWQPKPIPNLEGVRVIQIASGGYHSLALT 334
Query: 401 DRTNV 405
D V
Sbjct: 335 DEGKV 339
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 34/254 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H + +G + WG N QLG+G Q P +VS + K+ + G H++ +T+
Sbjct: 86 HVLMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTD 145
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTA-TACGADFTVWLSSVEGAS 183
G A+G+N GQ+GSGS N +P+P R CL ++V CG T L+ V+
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTAN--QPTPRRVSSCLQNKVAVGIVCGQ--TSSLAVVDNGE 201
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G GQLG G + Q P + AL G ++++ CG H +A
Sbjct: 202 VYGWGYNGNGQLGLGNNGN--------------QLTPCRLVALQGLCVLQIVCGYAHCLA 247
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ +G +Y WG YG+LG + ++ P ++ + E ++ + +S+ T+
Sbjct: 248 LSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQI-------MSEKERIVEVAACHSTHTSAA 300
Query: 304 ----GQLYMWGKLK 313
GQ+YMWG+ +
Sbjct: 301 KTQSGQVYMWGQCR 314
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 104 VSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+ ELS I+KA G+ + V VT D G N LG+G ++ I P + L
Sbjct: 15 LEELSM--IRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLN 72
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
++ + + G+ V L + E + G Y QLG+GT N+
Sbjct: 73 GRKIVSLSYGSGPHV-LMATEDGELFAWGHNGYSQLGNGTTNQ--------------GVA 117
Query: 220 PRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P ++A + + +V+VACG++H++A+ G VY WG+ G++G ++ PRRV
Sbjct: 118 PVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSC 177
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
+N V AV I G +S G++Y WG L NNG+ + P L+ L G
Sbjct: 178 LQNKV----AVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLVALQG 232
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
+ + G H +D + +WG YG+LG G
Sbjct: 233 LCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTG 268
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
+ PK L L+G + + G+ H + A D +WGH Y +LG G Q + +
Sbjct: 63 IVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVS 122
Query: 378 VDILEGMHVISVACGYGHSLVIVD 401
++L V+ VACG HS+ + D
Sbjct: 123 ANMLNK-KVVEVACGSHHSMALTD 145
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 165/396 (41%), Gaps = 58/396 (14%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
+AV + + G++VS RL V G + + D Y WG +RG+L
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLE---------VQLGTIKTKVLLKDNSCDLYLWGGGDRGRL 175
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
GH D R P +V L + G SHT+ + G ++G G LG G++R+
Sbjct: 176 GHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR 235
Query: 151 IEP----SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
P P+R + V AC + + +S + L +G+ G
Sbjct: 236 YSPLMIDGPLRDV--NVVHVACYENHSAVISE-------DGNLYTWGKAG----PFLGYM 282
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
D SV Q +PR + AL G IV+VACG +HT+ +D +G VY++G +G LG
Sbjct: 283 DDSV----TKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHD 338
Query: 267 ----KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD 317
K VP V + + +S G +S+ G L+MW G+L
Sbjct: 339 KAITKPTMVPNLVSICK----------VSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEP 388
Query: 318 DWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGY--GPYGQKSSA 373
++ P P+ + L + G H + A+ WG + G YG+ SS
Sbjct: 389 KSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSS- 447
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
P+ + + G+ + CG ++++ T++G+
Sbjct: 448 -PRGIVLPSGIRPTQINCGANFTVLV---TSIGQLF 479
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
W G G +D ++ T+ R + + R V C H + +D EGR Y++G N+ G
Sbjct: 272 WGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFG 331
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
+LG G +PT+V L I K GR H+ + EDG +GW GQLG G +
Sbjct: 332 ELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPK 389
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ P+PV + + +CG T A+I G+ G ++
Sbjct: 390 SLFSPTPVNGFNDQPLEDVSCGYGHT--------AAITANGVAYC--WGDNASSQCGVPS 439
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
S Y PR I +G ++ CG N TV V S G ++TWG G+LG+ E K
Sbjct: 440 S----VYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAK 495
Query: 268 DEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
+ P V+ V +++ G + C G G
Sbjct: 496 KTFSQPMPVESLSEKRV----KMVACGEDHIGCLVGHG 529
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D + PT + LV + C H A+D +G + WG RGQLG G+
Sbjct: 338 DKAITKPTMVPNLVSI----CKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFS 393
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS--------GSIRNEIE 152
PT V+ + ++ G HT +T +G + +G N Q G S R +
Sbjct: 394 PTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVL 453
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
PS +R T CGA+FTV ++S+ + G GQLG+G
Sbjct: 454 PSGIR-----PTQINCGANFTVLVTSI--GQLFTWGCNMSGQLGNGE------------- 493
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
A + +P + +L+ + + VACG +H + G+V
Sbjct: 494 AKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWV 531
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 153/354 (43%), Gaps = 45/354 (12%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTV 123
C H +A+ G+ +WGR GQLGHG+ + P V+ L Y I AG SH+
Sbjct: 58 CGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSG 117
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGA 182
V++ G G GQLG G + P V C V V ACG ++ L ++G
Sbjct: 118 FVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVL--LKGN 175
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ G + GQLG D + SV + P+ ++ G IV A +H+
Sbjct: 176 QVYGFGSGKRGQLGVSND-----RVKSVNV-------PKVVSGFEGVEIVGTAANGDHSA 223
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
AV G+VYTWG G G +D VP+ + N+ L V + G ++ +G
Sbjct: 224 AVSVDGHVYTWGRGFKGF------EDAHVPQCL-----NSSLNFTKV-ALGWNHALAMSG 271
Query: 303 GGQLYMWG--------KLKNNGDDWMYP-------KPLMDLSGWNLRCMDSGNMHHFVGA 347
G++YM G L+N G +P + + L G + + +G H +
Sbjct: 272 EGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVT 331
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVI 399
+ I +WG ++G+LG G ++S + +D L I V CG G + +
Sbjct: 332 EHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAV 385
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 38/344 (11%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
E R ++WG GQLG KI +D P ++ + S I G +H + +T G +L+
Sbjct: 17 EQRVWSWGAGTEGQLG--TKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALS 74
Query: 134 FGWNKHGQLGSGS-IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQ 191
+G GQLG G + N + P V L +T + G + ++S + + G
Sbjct: 75 WGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVS--DTGFVFTCGDGS 132
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLGHG DN + P ++ + +VACG H++ + VY
Sbjct: 133 FGQLGHG-DN-------------ASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVY 178
Query: 252 TWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+G G G+LG + K VP+ V F+ ++ +A +S+ + G +Y W
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGT----AANGDHSAAVSVDGHVYTW 234
Query: 310 GKLKNNGDDWMYPKPL---MDLS----GWNLRCMDSGNMH-HFVGADSSCISWGHAQYGE 361
G+ +D P+ L ++ + GWN SG + +G + + G
Sbjct: 235 GRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGP 294
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ P ++ + +KV L+G + +A G HS+++ + +
Sbjct: 295 AKHFPDLREFNL--EKVPGLDGTKITDIAAGAEHSVIVTEHGEI 336
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
+S+ V++WG G G+LG + +DE P+ + F +++ + ++ G + G
Sbjct: 15 ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI----SSLACGGAHVIALTSAG 70
Query: 305 QLYMWGKLKNNG--------DDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWG 355
+ WG+ N+G + +YPK + L G+ + + +G H FV + G
Sbjct: 71 KALSWGR-GNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G+LG+G S P KV +HV VACG HSLV++ V
Sbjct: 130 DGSFGQLGHGD--NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQV 177
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + N + P + L G I V+AG H V G +T G GQLGHGD
Sbjct: 86 GEVVSNTLYPKAVTSLDGYFITHVSAGW--SHSGFVSDTGFVFTCGDGSFGQLGHGDNAS 143
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P VS + + G H++V+ + FG K GQLG + R ++ V
Sbjct: 144 HCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR--VKSVNVP 201
Query: 158 CLVS-----EVTATACGADFTVWLSSVEG---------ASILNAGLPQ-------YGQLG 196
+VS E+ TA D + +S V+G +A +PQ + ++
Sbjct: 202 KVVSGFEGVEIVGTAANGDHSAAVS-VDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVA 260
Query: 197 HGTDNE---------YNTKDSSVKLAYEAQ--------PRPR-----AIAALAGETIVKV 234
G ++ Y + + + + Q P R + L G I +
Sbjct: 261 LGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDI 320
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
A G H+V V G + TWG+G +G+LG + +D+ P V +
Sbjct: 321 AAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSL 363
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 156/342 (45%), Gaps = 43/342 (12%)
Query: 80 YTWGRNERGQLG---HGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
++WG + GQLG GD + P V L+ +I++ G HT V+ DG + G
Sbjct: 4 FSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMCG 63
Query: 136 WNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG +E+ P LV +T +CG D T L+ + +L G GQ
Sbjct: 64 ANDRGQLGQDRPGSELAHVPATETLV--ITQVSCGNDHT--LAVTDRGQVLGWGRNDRGQ 119
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G +T DS E + +PR + +L+ + +VACG+ H++A+ G ++ WG
Sbjct: 120 CG------LSTGDS------EDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWG 167
Query: 255 FGGYGRLGHREQKDEWVPRRV---DVFQRNNVLP--PEAVISAGSVNSSCTAGGGQLYMW 309
+G+LG P R D Q+ + LP P ++ G +S + G ++ W
Sbjct: 168 DNSFGQLGIG------APGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGW 221
Query: 310 GKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGE 361
GK N G +D + P PL +L ++ + G N + A +G G+
Sbjct: 222 GK-NNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQ 280
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
LG+G + + + P+ V G + VACG H+LV+ RT
Sbjct: 281 LGHGSHSNEVN--PRSVQGFLGSEITQVACGRQHTLVLEGRT 320
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQ--LGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VSC H +AV G+ WGRN+RGQ L GD + +P + LS ++ + G
Sbjct: 93 VSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSM 152
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI---EPSPVRCLV-SEVTATACGADFTVWL 176
H++ +T DG A+G N GQLG G+ + P + L + ACG + L
Sbjct: 153 HSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL 212
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
SV GA + G GQLG GT E + P + L + + +AC
Sbjct: 213 -SVSGA-VFGWGKNNCGQLGLGTT--------------EDRVSPTPLKNLKTKQVKYIAC 256
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G N+T + + G ++ +G G G+LGH +E PR V F
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGF 298
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L GV IR +A G H A+ V G + WG+N GQLG G R PT +
Sbjct: 188 PQQLSSLPGVPIRRLACG--GWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKN 245
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L ++K G+++T ++T G FG GQLG GS NE+ P V+ + SE+T
Sbjct: 246 LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQ 305
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
ACG T+ L G + G GQLG D+
Sbjct: 306 VACGRQHTLVLEGRTG-RFFSLGQGSKGQLGLDNDS 340
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 151 IEPS-PVRCLVSEVTATAC-GADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKD 207
+EPS V+ L +++ AC A F V S + G GQLGHG+ NE N
Sbjct: 424 LEPSKAVQTLEMALSSPACLNASFLVGAGS---GGLFLFGQGSEGQLGHGSHSNEVN--- 477
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK-GYVYTWGFGGYGRLG 262
PR++ G I +VACG HT+ ++ + G Y+ G G G+LG
Sbjct: 478 ------------PRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLG 521
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+++ + C++ + G + +G+ GQLGHG P V + +I +
Sbjct: 433 LEMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQV 492
Query: 116 GAGRSHTVVVT-EDGNSLAFGWNKHGQLG 143
GR HT+V+ G + G GQLG
Sbjct: 493 ACGRQHTLVLEGRTGGFYSLGQGSKGQLG 521
>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
Length = 1085
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 57/370 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ V+A H VAV G+ YTWG G+LGH D I + +++
Sbjct: 178 PCKIDSLHGSSIKLVSAS--KFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L +++ A + HTV+ TE G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVIFGLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S++ A T +S E I G + GQLG+GT N +
Sbjct: 296 RSKIVDVAAANKHTAVVS--ESGEIFTWGCNREGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
PR + L G+ +VA HT+ + G VYTWG + +K P +
Sbjct: 342 PRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKF 401
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
+R +V+ I+AG V+S G ++ W D S +LRC
Sbjct: 402 HRMKRLHVVN----IAAGMVHSMALTDDGAVFYW-----------------DSSDADLRC 440
Query: 336 MDSGNMHHFVGADSSCISWGH---AQYGELG--YGPYGQKSSAMPKKVDILEGM-HVISV 389
++ G D IS G A +G + G+ P L G+ SV
Sbjct: 441 Q---QLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLHGIKRATSV 497
Query: 390 ACGYGHSLVI 399
+ G H L++
Sbjct: 498 SVGETHLLIV 507
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 74/337 (21%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G++ + P + L IK A + H+V V+ G +
Sbjct: 152 VATELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVI--ATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG Y + D+ QP PR +++L + IV VA HT V
Sbjct: 270 WGSNREGQLG------YTSVDT--------QPTPRRVSSLRSK-IVDVAAANKHTAVVSE 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G ++TWG G+LG+ + PR V+ + + V A ++A ++ C G
Sbjct: 315 SGEIFTWGCNREGQLGYGTSNSASNYTPRVVE-YLKGKVF---ARVAAAKFHTICLGVDG 370
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
++Y WG + P+ R + + N+
Sbjct: 371 EVYTWGH------RLVTPR----------RVVIARNL----------------------- 391
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+KS P K ++ +HV+++A G HS+ + D
Sbjct: 392 ----KKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTD 424
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
D++ V C H +A+ ++WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ +T G +G NK GQLG + P+ ++ L S+ + +CG D T
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTGHEIN---------------PRKVFELMGNIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+ACG HT A V S G +Y++G GG G+LG + P V + N LP I
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPV----KGNFLPFNGQIPL 354
Query: 293 GS 294
S
Sbjct: 355 NS 356
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 33/348 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
++ P R + +R V GC H V V +G YT G N+ GQLGH R RP
Sbjct: 22 VLEPRRCNFFLNKTVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS- 161
V L I G +HT+ + + G A+G+ GQLG G+ P ++ L
Sbjct: 78 VGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV 137
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG ++ LS +G+ + + G ++GQLG G D + Q P+
Sbjct: 138 QIVQVACGYYHSLALS--KGSEVFSWGQNKHGQLGLGYD-------------LKKQTSPQ 182
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L G ++A G H+ A+ G V+ WG +G+LG ++ D +VP + +
Sbjct: 183 LIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGD-DWMYPKPLMDLSGWNLRC 335
++ IS G +++ G ++ +G+L +N + P+ + +L G +
Sbjct: 243 KIV----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298
Query: 336 MDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ G H FV + S+G G+LG G + S P K + L
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 34/333 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P + ++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R P V L ++ + A +CG T+ L+ + + G GQLG
Sbjct: 64 GQLGHEKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLN--DKGQVYAWGFAADGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY PR I +L+ IV+VACG H++A+ V++WG +
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGYDLKKQTSPQLI----KSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ G +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
+ P+KV L G V +ACG H+ V T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 38/278 (13%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I E+ P RC L V CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +++ RP + AL + IV V+CG HT+ ++ KG
Sbjct: 60 CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW--VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
VY WGF G+LG +E+ VPR + ++ ++ G +S + G ++
Sbjct: 104 QVYAWGFAADGQLG-LPGTEEYTRVPRNIKSLSDVQIVQ----VACGYYHSLALSKGSEV 158
Query: 307 YMWGKLKNNGDDWMY-------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+ WG+ K+ Y P+ + L G + +G H F S + WG +
Sbjct: 159 FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNK 218
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+G+LG + +P + L ++ ++CG H+
Sbjct: 219 FGQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 149/344 (43%), Gaps = 34/344 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G YT G N GQLGH P V L KI G++H++ V E
Sbjct: 44 HSVFLLHDGSVYTCGSNSCGQLGHNKP--GITPEFVGALDTQKITLVSCGQAHSLAVNEQ 101
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
G A+G + GQLG G+ + P ++ L + CG + LS + +
Sbjct: 102 GQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS--KDGQLFT 159
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQLG G K KL P+ + +LAG + K+ G +H+ A+
Sbjct: 160 WGQNTSGQLGLG-------KGEPSKLF------PQPLKSLAGIPLAKITAGGDHSFALSL 206
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G V+ WG G+LG + +D VP + + V+ IS G +++ G L
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVH----ISCGEEHTAALTKDGGL 262
Query: 307 YM-----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQ 358
+ WG+L + + + + P+ +++L G + + G H A SS ++G
Sbjct: 263 FTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNS 322
Query: 359 YGELGYGPYGQKSSAMPKKVDILEG-MH--VISVACGYGHSLVI 399
+G+LG G S P K L G +H V + CG HS ++
Sbjct: 323 HGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLL 366
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G+L G +G KG + + + P L+ L G+ + + AG H A+ + G
Sbjct: 153 KDGQLFTWGQNTSGQLGLGKG--EPSKLFPQPLKSLAGIPLAKITAG--GDHSFALSLSG 208
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG+N+ GQLG D R P + L K+ G HT +T+DG FG
Sbjct: 209 AVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDG 268
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG GS NE+ P V L+ +EV+ CG T+ + G + G +GQLG
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGG-VYAFGCNSHGQLG 327
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE---TIVKVACGTNHTVAVDS 246
G L+ + P P + L+G T+ K+ CG +H+ + S
Sbjct: 328 TGV------------LSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYS 368
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 37/330 (11%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG+ + GQLG G ++R+ P + + +K+ G H+V + DG+ G N
Sbjct: 4 WGKAKDGQLGIG--VERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS 61
Query: 139 HGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG + I P V L ++T +CG + L+ E + G + GQLG
Sbjct: 62 CGQLGHN--KPGITPEFVGALDTQKITLVSCGQAHS--LAVNEQGQVFAWGAGEEGQLGL 117
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G T +++V++ PR I L I +V CG H +A+ G ++TWG
Sbjct: 118 G------TTETAVRI-------PRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNT 164
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
G+LG + + + P+ + ++ P A I+AG +S + G ++ WGK K
Sbjct: 165 SGQLGLGKGEPSKLFPQPL----KSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQ 220
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ D P + L + + G H + D ++G +G+LG+G
Sbjct: 221 LGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHG--ST 278
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +P++V L G V + CG H+L
Sbjct: 279 ANELLPRRVLELMGTEVSQITCGRHHTLAF 308
>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
[Cucumis sativus]
Length = 1084
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 57/370 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ V+A H VAV G+ YTWG G+LGH D I + +++
Sbjct: 178 PCKIDSLHGSSIKLVSAS--KFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L +++ A + HTV+ TE G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVIFGLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S++ A T +S E I G + GQLG+GT N +
Sbjct: 296 RSKIVDVAAANKHTAVVS--ESGEIFTWGCNREGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
PR + L G+ +VA HT+ + G VYTWG + +K P +
Sbjct: 342 PRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKF 401
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
+R +V+ I+AG V+S G ++ W D S +LRC
Sbjct: 402 HRMKRLHVVN----IAAGMVHSMALTDDGAVFYW-----------------DSSDADLRC 440
Query: 336 MDSGNMHHFVGADSSCISWGH---AQYGELG--YGPYGQKSSAMPKKVDILEGM-HVISV 389
++ G D IS G A +G + G+ P L G+ SV
Sbjct: 441 Q---QLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLHGIKRATSV 497
Query: 390 ACGYGHSLVI 399
+ G H L++
Sbjct: 498 SVGETHLLIV 507
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 74/337 (21%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G++ + P + L IK A + H+V V+ G +
Sbjct: 152 VATELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVI--ATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG Y + D+ QP PR +++L + IV VA HT V
Sbjct: 270 WGSNREGQLG------YTSVDT--------QPTPRRVSSLRSK-IVDVAAANKHTAVVSE 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G ++TWG G+LG+ + PR V+ + + V A ++A ++ C G
Sbjct: 315 SGEIFTWGCNREGQLGYGTSNSASNYTPRVVE-YLKGKVF---ARVAAAKFHTICLGVDG 370
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
++Y WG + P+ R + + N+
Sbjct: 371 EVYTWGH------RLVTPR----------RVVIARNL----------------------- 391
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+KS P K ++ +HV+++A G HS+ + D
Sbjct: 392 ----KKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTD 424
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 266 ADVLLPRPLESNVVLDVHHIACGFR--HAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----P 155
+V L+ + G HT VT G +G H G LG G+ + P P
Sbjct: 324 RLVESLAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGP 383
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ L +V + CG T ++S + G +G LGHG N N +AY
Sbjct: 384 LEGL--QVASVTCGPWHTALVTST--GQLFTFGDGTFGVLGHG--NREN-------IAY- 429
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHR 264
P+ + +LAG + VACG HT AV S G ++TWG G RLGH
Sbjct: 430 ----PKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHG 485
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
+++ P V N + S+ T G M +G+L N D
Sbjct: 486 DKEPRLKPTCVPALIDFNF---HKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGK 542
Query: 321 YPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D LSG ++ + G H + + + +WG G LG+G + + P V
Sbjct: 543 VPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKT--PTLV 600
Query: 379 DILEGMHVISVACGYGHSLVI 399
+ L+ HV +ACG +S I
Sbjct: 601 EALKDKHVKYIACGANYSAAI 621
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG H V +G V+TWG GRLGH KD PR V+
Sbjct: 271 PRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLA 330
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V I+ G ++ G++Y WG L +G D W+ + L G
Sbjct: 331 MTTV----DFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEG 386
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H V + ++G +G LG+G +++ A PK+V+ L G+ I+V
Sbjct: 387 LQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAV 444
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 445 ACGVWHTAAVVE 456
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
D++ V C H +A+ ++WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ +T G +G NK GQLG + P+ ++ L S+ + +CG D T
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTGHEIN---------------PRKVFELMGNIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+ACG HT A V S G +Y++G GG G+LG + P V + N LP I
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPV----KGNFLPFNGQIPL 354
Query: 293 GS 294
S
Sbjct: 355 NS 356
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 33/348 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
++ P R + +R V GC H V V +G YT G N+ GQLGH R RP
Sbjct: 22 VLEPRRCNFFLNKTVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS- 161
V L I G +HT+ + + G A+G+ GQLG G+ P ++ L
Sbjct: 78 VGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV 137
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ ACG ++ LS +G+ + + G ++GQLG G D + Q P+
Sbjct: 138 QIVQVACGYYHSLALS--KGSEVFSWGQNKHGQLGLGYD-------------LKKQTSPQ 182
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I +L G ++A G H+ A+ G V+ WG +G+LG ++ D +VP + +
Sbjct: 183 LIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGD-DWMYPKPLMDLSGWNLRC 335
++ IS G +++ G ++ +G+L +N + P+ + +L G +
Sbjct: 243 KIV----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298
Query: 336 MDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ G H FV + S+G G+LG G + S P K + L
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 34/333 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P + ++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R P V L ++ + A +CG T+ L+ + + G GQLG
Sbjct: 64 GQLGHEKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLN--DKGQVYAWGFAADGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY PR I +L+ IV+VACG H++A+ V++WG +
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGYDLKKQTSPQLI----KSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ G +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
+ P+KV L G V +ACG H+ V T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 38/278 (13%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I E+ P RC L V CG TV++ ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFV--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +++ RP + AL + IV V+CG HT+ ++ KG
Sbjct: 60 CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW--VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
VY WGF G+LG +E+ VPR + ++ ++ G +S + G ++
Sbjct: 104 QVYAWGFAADGQLG-LPGTEEYTRVPRNIKSLSDVQIVQ----VACGYYHSLALSKGSEV 158
Query: 307 YMWGKLKNNGDDWMY-------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
+ WG+ K+ Y P+ + L G + +G H F S + WG +
Sbjct: 159 FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNK 218
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+G+LG + +P + L ++ ++CG H+
Sbjct: 219 FGQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ C H V +G Y+WG G+LGHG +P
Sbjct: 298 DYLVPKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ L+ I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG +
Sbjct: 416 EGIHVSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDRASLSV------------- 460
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 461 -PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 519
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+VP V V P ++ G + G +Y ++G+L N D +
Sbjct: 520 DSRFVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G G P V+
Sbjct: 576 PVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG--GTDDKNTPTLVE 633
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 634 ALKDKQVRSVVCGINFTAAI 653
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 302 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ + L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRASLSVPREVESLKGLRTV 473
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 474 RAACGVWHTAAVVE 487
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQ 89
+L P + L G +R V A C H AV G+ +TWG ++G+
Sbjct: 456 ASLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGR 513
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK R PT V+ L + + G TV +T G+ G +GQLG+ G
Sbjct: 514 LGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADG 573
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +E + V E++ CGA L+S + G G+LGHG ++ NT
Sbjct: 574 LLPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGGTDDKNT 628
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + V CG N T A+
Sbjct: 629 --------------PTLVEALKDKQVRSVVCGINFTAAI 653
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL V
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPM 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A S S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSTHI--SAAKTQGGHVYMWGQCR 314
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 37/303 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEVASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPMRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + + ++E V+
Sbjct: 231 HRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPEHIMVEKERVV 287
Query: 388 SVA 390
+A
Sbjct: 288 EIA 290
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPMRVAALHRVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 101 PTIVSELSKYKIKKAGAGRSH 121
P + + ++ A +H
Sbjct: 276 PEHIMVEKERVVEIAACHSTH 296
>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
Length = 1076
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ V+A H VAV G YTWG G+LGH + I + +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++K A + HTVV TE G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S++ A A T +S E + G + GQLG+GT N +
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ + VA HT+ + + G ++TW GHR PRRV +
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHRLV----TPRRVVIVR 389
Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
++N P + I+AG V+S G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
Q P + +L G I V+ H+VAV ++G VYTWGFG GRLGH E Q
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
PR+V + + + I+A ++ GG+++ WG + + D P+
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L + + + N H V ++S +WG + G+LGYG S+ P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350
Query: 384 MHVISVACGYGHSLVI 399
+ VA H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 31/246 (12%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L IK A + H+V V+ G +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTV--VATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG Y + D+ QP PR +++L + IV VA HT +
Sbjct: 270 WGSNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISE 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G+LG+ + PR V+ + + VL ++A ++ G
Sbjct: 315 SGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVL---KGVAAAKYHTIVLGADG 370
Query: 305 QLYMWG 310
+++ WG
Sbjct: 371 EIFTWG 376
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 33/295 (11%)
Query: 124 VVTEDGNSLA---FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
VV + +S+A F W + QLG+G+ + P V L + A F S
Sbjct: 144 VVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVS 203
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACG 237
G + G + G+LGH + ++ + + + PR + G VK +A
Sbjct: 204 ARG-EVYTWGFGRGGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAA 254
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+HTV G V+TWG G+LG+ + +PRRV + V ++A + ++
Sbjct: 255 KHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHT 309
Query: 298 SCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
+ + G+++ WG K +N P+ + L G L+ + + H V GAD
Sbjct: 310 AVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGAD 369
Query: 349 SSCISWGHAQYG--ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WGH + +K+ + P K + +HV+S+A G HS+ + +
Sbjct: 370 GEIFTWGHRLVTPRRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422
>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
Length = 1025
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ V+A H VAV G YTWG G+LGH + I + +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++K A + HTVV TE G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S++ A A T +S E + G + GQLG+GT N +
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ + VA HT+ + + G ++TW GHR PRRV +
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHRLV----TPRRVVIVR 389
Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
++N P + I+AG V+S G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
Q P + +L G I V+ H+VAV ++G VYTWGFG GRLGH E Q
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
PR+V + + + I+A ++ GG+++ WG + + D P+
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L + + + N H V ++S +WG + G+LGYG S+ P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350
Query: 384 MHVISVACGYGHSLVI 399
+ VA H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 31/246 (12%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L IK A + H+V V+ G +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTV--VATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG Y + D+ QP PR +++L + IV VA HT +
Sbjct: 270 WGSNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISE 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G+LG+ + PR V+ + + VL ++A ++ G
Sbjct: 315 SGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVL---KGVAAAKYHTIVLGADG 370
Query: 305 QLYMWG 310
+++ WG
Sbjct: 371 EIFTWG 376
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 33/295 (11%)
Query: 124 VVTEDGNSLA---FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
VV + +S+A F W + QLG+G+ + P V L + A F S
Sbjct: 144 VVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVS 203
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACG 237
G + G + G+LGH + ++ + + + PR + G VK +A
Sbjct: 204 ARG-EVYTWGFGRGGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAA 254
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
+HTV G V+TWG G+LG+ + +PRRV + V ++A + ++
Sbjct: 255 KHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHT 309
Query: 298 SCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
+ + G+++ WG K +N P+ + L G L+ + + H V GAD
Sbjct: 310 AVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGAD 369
Query: 349 SSCISWGHAQYG--ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WGH + +K+ + P K + +HV+S+A G HS+ + +
Sbjct: 370 GEIFTWGHRLVTPRRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422
>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 152/369 (41%), Gaps = 56/369 (15%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
V +DI C H V +G +TW G+LGHG ++ RP +V L+ I
Sbjct: 1203 VKIDI-----ACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNID 1257
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLVSEVTATA 167
G HT V+ G+ +G H G LG GS + P PV L +V + A
Sbjct: 1258 FVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGL--QVLSVA 1315
Query: 168 CGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
CG W S++ A+ + G +G LGHG E+ P+ +
Sbjct: 1316 CGT----WHSALATANGKLFTFGDGAFGVLGHGD--------------RESVSYPKEVKM 1357
Query: 226 LAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
L+G +KVACG HTVA+ S ++TWG G RLGH ++ +P V
Sbjct: 1358 LSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 1417
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMD-LS 329
N I+ G + G ++ G+L ++ D P + D L
Sbjct: 1418 SSLIDYNF----NQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLV 1473
Query: 330 GWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + G+ H + + S +WG G LG+G + + P V+ L HV S
Sbjct: 1474 GEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKT--PTLVEALRERHVKS 1531
Query: 389 VACGYGHSL 397
++CG S+
Sbjct: 1532 ISCGADQSV 1540
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 47 PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R+ P+ G+ + VA G + H G+ +T+G G LGHGD+ P V
Sbjct: 1299 PKRVSGPVEGLQVLSVACG--TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVK 1356
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSL--------AFGWNK--HGQLGSGSIRNEIEPSP 155
LS K K G HTV + E N F W +LG G+ + P+
Sbjct: 1357 MLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTC 1416
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V L+ ACG FTV L++ + G +GQLG + +S KL
Sbjct: 1417 VSSLIDYNFNQIACGHTFTVALTT--SGHVFTMGGTSHGQLG--------SSNSDGKLPC 1466
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
Q R L GE + +++CG +H + S+ V+TWG G GRLGH ++ D P
Sbjct: 1467 LVQDR------LVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTL 1520
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
V+ + +V IS G+ S C +G Q + + + ++N
Sbjct: 1521 VEALRERHV----KSISCGADQSVC-SGCRQAFGFTRKRHN 1556
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ +ACG H V +G V+TW GRLGH Q D P+ V+ N+ ++
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNI----DFVA 1260
Query: 292 AGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSGWNLRCMDSGNMH 342
G ++ + G L+ WG L +G D W+ + + G + + G H
Sbjct: 1261 CGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWH 1320
Query: 343 H-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
A+ ++G +G LG+G ++S + PK+V +L G+ + VACG H++ IV+
Sbjct: 1321 SALATANGKLFTFGDGAFGVLGHG--DRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVE 1378
Query: 402 RTN 404
N
Sbjct: 1379 VMN 1381
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 673 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 732
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 733 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 792
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 793 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 844
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 845 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 898
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 899 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 931
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 677 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 727
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 728 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 782
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 783 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 840
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC ++ + D SWG LG+G ++
Sbjct: 841 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 896
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 897 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 927
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 86/237 (36%), Gaps = 61/237 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 698
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 759 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 815
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 816 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 870
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 41/255 (16%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 732 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 791
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 792 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 851
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 852 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 898
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 899 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 951
Query: 223 IAALAGETIVKVACG 237
+ L + IV +ACG
Sbjct: 952 LPGLDTKHIVGIACG 966
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 152/347 (43%), Gaps = 42/347 (12%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VAA S H +A+ +G + WG N GQLG+G R P V LS AG
Sbjct: 38 VVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSGG--VSVDAGH 95
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H++ V +DG A+G N +GQLG G+ + P V+ L SEV A G+ ++ L S
Sbjct: 96 YHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGL-SEVVAVTAGSSHSLALRS- 153
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G GQLG GT R + L +V V G++
Sbjct: 154 -DGTVWAWGANASGQLGEGTTTN----------------RLVPVPVLGLSEVVAVEAGSS 196
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++A+ S G V+ WG G+LG VP + VL + AGS S
Sbjct: 197 HSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQ--------VLSGVVAMEAGSGYSLA 248
Query: 300 TAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
G ++ WG + GDD + P ++ LS + + +G ++ + +D +
Sbjct: 249 VRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVW 306
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG YG+ G G + A P + L G ++VA GY HSL +
Sbjct: 307 AWGSNDYGQRGEGTTSNR--AFPVQARGLSGG--VAVAAGYAHSLAV 349
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 151/338 (44%), Gaps = 42/338 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV +G + WG N GQLG G +R P V LS ++ AG SH++ + D
Sbjct: 97 HSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSD 154
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N GQLG G+ N + P PV L SEV A G+ ++ L S ++ G
Sbjct: 155 GTVWAWGANASGQLGEGTTTNRLVPVPVLGL-SEVVAVEAGSSHSLALRS--DGTVWAWG 211
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG GT + R + L+G +V + G+ +++AV + G
Sbjct: 212 ANASGQLGDGTTTK----------------RLVPVQVLSG--VVAMEAGSGYSLAVRNDG 253
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG+ G+LG P V V + V+ ++AGS S G ++
Sbjct: 254 TVWAWGYNFSGQLGDDTVTSRSTP--VQVLGLSEVVA----VAAGSSLSLALRSDGTVWA 307
Query: 309 WG------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
WG + + + +P LSG + +G H V +D + +WG G+
Sbjct: 308 WGSNDYGQRGEGTTSNRAFPVQARGLSG--GVAVAAGYAHSLAVRSDGTVWAWGSNASGQ 365
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G +S P +V L G V++V+ G SL I
Sbjct: 366 LGEGTTSNRSE--PVQVQGLSG--VVAVSAGASSSLAI 399
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 154/371 (41%), Gaps = 39/371 (10%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G+R N P + R L G VA H +AV +G + WG N GQLG G
Sbjct: 314 GQRGEGTTSNRAFPVQARGLSG----GVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
R P V LS AGA S ++ + DG A+G N GQLG G+ + + P
Sbjct: 370 TTSNRSEPVQVQGLSGVVAVSAGA--SSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVP 427
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V+ L S V A G F+ L+ ++ G YGQLG T S L
Sbjct: 428 VQVQGL-SGVVAVVAGTSFS--LAVRNDGTVWGWGYNGYGQLG--------TFTSLFVLV 476
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P + L+G +V VA G H++AV S G V+ G G+LG + P
Sbjct: 477 ------PVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPV 528
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD-DWMYPKPLMDLSG 330
+V L ++AG +S G ++ WG GD W + ++G
Sbjct: 529 QV------TGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTG 582
Query: 331 WNLR--CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ R S + V D + +WG YG+LG G + +P +V L G V++
Sbjct: 583 LSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT-SSNQLVPVQVQQLRG--VVA 639
Query: 389 VACGYGHSLVI 399
V G HSL +
Sbjct: 640 VEVGSSHSLAL 650
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 167/416 (40%), Gaps = 88/416 (21%)
Query: 41 DGNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G L T R LV V ++ VA S H +A+ +G + WG N GQLG G
Sbjct: 115 NGQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTT 174
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP--- 153
R P V LS ++ AG SH++ + DG A+G N GQLG G+ + P
Sbjct: 175 NRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQV 232
Query: 154 -------------------------------------------SPVRCL-VSEVTATACG 169
+PV+ L +SEV A A G
Sbjct: 233 LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSEVVAVAAG 292
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L S ++ G YGQ G GT + A+ Q R L+G
Sbjct: 293 SSLSLALRS--DGTVWAWGSNDYGQRGEGTTSNR---------AFPVQAR-----GLSGG 336
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
V VA G H++AV S G V+ WG G+LG + P +V L
Sbjct: 337 --VAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQV------QGLSGVVA 388
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHH 343
+SAG+ +S G ++ WG + GD D + P + LSG + + +
Sbjct: 389 VSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSG-VVAVVAGTSFSL 447
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V D + WG+ YG+L G + +P +V L G V++VA G HSL +
Sbjct: 448 AVRNDGTVWGWGYNGYGQL--GTFTSLFVLVPVQVTGLSG--VVAVAAGNLHSLAV 499
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 24/226 (10%)
Query: 42 GNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G L + T L LV V + VA + H +AV +G + GRN+ GQLG G
Sbjct: 464 GQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V+ LS + AG SH++ V DG+ A+G+N GQLG GS P V
Sbjct: 524 RSAPVQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVT 581
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L S + A +D++ ++ ++ G YGQLG GT + Q
Sbjct: 582 GL-SGRGSVAASSDYS--MAVRYDGTVWAWGFNLYGQLGDGTTSSN-------------Q 625
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P + L G +V V G++H++A+ S G V+TWG+ +G+LG+
Sbjct: 626 LVPVQVQQLRG--VVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGN 669
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+G + G N GQLG G + R P V LS+ + A AG H++ + DG A+G
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWG 61
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEGASILNAG 188
+N +GQLG+GS+ + EP V+ L V+ + A D TVW G
Sbjct: 62 YNGYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVW----------AWG 111
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG GT + P + L+ +V V G++H++A+ S G
Sbjct: 112 DNPNGQLGEGTTTR--------------RLVPVQVQGLS--EVVAVTAGSSHSLALRSDG 155
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG G+LG + VP V V + V+ E AGS +S G ++
Sbjct: 156 TVWAWGANASGQLGEGTTTNRLVP--VPVLGLSEVVAVE----AGSSHSLALRSDGTVWA 209
Query: 309 WGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
WG + GD + P+ LSG + M++G+ + V D + +WG+ G+LG
Sbjct: 210 WGANASGQLGDGTTTKRLVPVQVLSG--VVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLG 267
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+S+ V +L V++VA G SL +
Sbjct: 268 DDTVTSRST----PVQVLGLSEVVAVAAGSSLSLAL 299
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVV 125
S + +AV +G + WG N GQLG G P V +L + G SH++ +
Sbjct: 593 SDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRG--VVAVEVGSSHSLAL 650
Query: 126 TEDGNSLAFGWNKHGQLGSG 145
DG +G+N GQLG+G
Sbjct: 651 RSDGTVWTWGYNSFGQLGNG 670
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 152/336 (45%), Gaps = 44/336 (13%)
Query: 41 DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
DG L P++G+ + R +A G + H +A+ +GR +WG N G+LG G + R
Sbjct: 782 DGTLFPRAEPVPVIGLSECRAIAGG--ATHGLALKTDGRVLSWGANAEGELGDGTTVARR 839
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
P +V L+ + G H++ + DG+ A+G N GQLG G+ + + P V+ L
Sbjct: 840 APAVVGPLAG--VLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGL 897
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V A A G F+ L+ ++ G GQLG DN T S V
Sbjct: 898 -TGVAAIAAGDGFS--LALKHDGTVWAWGGNTLGQLG---DN--TTLRSLV--------- 940
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P AL G T VA G NH++A+ G ++ WG YG LG Q + P +V
Sbjct: 941 PVRTQALTGVT--AVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQV---- 994
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSG 330
L + + AG +S GG+++ WG+ +K+N + P + L+
Sbjct: 995 --TSLTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQ--LLPAQVPGLT- 1049
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ + G H + +D S +WGH G+LG G
Sbjct: 1050 -SAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTG 1084
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 155/371 (41%), Gaps = 54/371 (14%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H VA+ V+G + WG N R QLG G + QR P V+ L++ K AG G H+V V +
Sbjct: 308 HSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGL-HSVAVKGN 366
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA-------DFTVWLSSVEG 181
G A+G N GQ+G G+ ++ P+ R LV +A G D T W +
Sbjct: 367 GEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNA 426
Query: 182 ASILNAG-------------LPQYGQLGHGTDNEYNTKDSSVKLAY-----------EAQ 217
S L G L + + GT + K+ + A
Sbjct: 427 QSQLGDGTTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTAL 486
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
R + + + VA G H++A+ G V+ WG G+LG P R
Sbjct: 487 NRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVT----PTRNAP 542
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLS 329
F+ N+ E V+S AG +S G +++WG+ +N G P+ + L+
Sbjct: 543 FRVPNL---EGVVSLAAGGEHSLALKADGTVWVWGRQDTCADPENVGRVLRVPEQVQGLT 599
Query: 330 GWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ + +G H V AD + +WG G+L G + + + P +VD L G VIS
Sbjct: 600 --DAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMT--PARVDGLTG--VIS 653
Query: 389 VACGYGHSLVI 399
+ G +L +
Sbjct: 654 FSVGSEQTLAL 664
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 162/398 (40%), Gaps = 67/398 (16%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P R+ L GV I F S +A+ +G + WG N +GQLG G + R RPT V
Sbjct: 640 MTPARVDGLTGV-ISFSVG---SEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQV 695
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ + GA H +V+ +D A+G N GQ+G G++ + + +PVR ++
Sbjct: 696 PTLTDVRTVAMGA--VHALVLKDDLTLWAWGSNAEGQVGDGAL--DWQAAPVRSGLAASR 751
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-----------------------DN 201
A ++ L S+ + G GQLG GT +
Sbjct: 752 GLAAATQYS--LGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRAIAGGATH 809
Query: 202 EYNTKDSSVKLAYEAQPR-------------PRAIAALAGETIVKVACGTNHTVAVDSKG 248
K L++ A P + LAG ++ +A G H++A+ G
Sbjct: 810 GLALKTDGRVLSWGANAEGELGDGTTVARRAPAVVGPLAG--VLSIAVGARHSLALLGDG 867
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V WG G+LG +P RV L A I+AG S G ++
Sbjct: 868 SVQAWGSNIQGQLGDGTTVSRVLPVRV------QGLTGVAAIAAGDGFSLALKHDGTVWA 921
Query: 309 WG--KLKNNGDDW----MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
WG L GD+ + P L+G + + +G H + D + +WG YGE
Sbjct: 922 WGGNTLGQLGDNTTLRSLVPVRTQALTG--VTAVAAGRNHSLALKGDGTLWAWGSNTYGE 979
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G +K + P +V L G+ + G HSL +
Sbjct: 980 LGDGTQARKLA--PVQVTSLTGVSALD--AGDHHSLAV 1013
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 153/384 (39%), Gaps = 59/384 (15%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
A G H +A+ +G ++WG N GQLG G I R P V L+ + A
Sbjct: 97 FSITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLT--NVVAIAA 154
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----------VSEVTATA 167
G SH++V+ DG A+G N GQLG G+ + P V L V + TA
Sbjct: 155 GFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTA 214
Query: 168 CGADFTVWLSSVEG--------ASILNAGLPQYGQL----GHGTDNEYNTKDSSV----- 210
G +T W +V+G A LP + G G+ + D SV
Sbjct: 215 DGRLWT-WGGNVDGQLGTGDLVGRSTAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGK 273
Query: 211 ----KL---AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+L + + P P + L +V V G H+VA+ G V+ WG +LG
Sbjct: 274 NDAGQLGLGSVVSTPTPTQVPGL--TEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGD 331
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-LKNNGDDWMYP 322
Q +R+ Q + + V + G ++S G G+++ WG + D Y
Sbjct: 332 GTQT-----QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTY- 385
Query: 323 KPLMDLSGWNLRCM------DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
LM L R + +G H + D + WG +LG G ++A P
Sbjct: 386 --LMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG----TTTARP 439
Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
V +L V +V+ G HSL +
Sbjct: 440 LPVQVLNLTRVAAVSAGTYHSLAL 463
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G ++WG N GQLG G Q P V L + I GAG H++ + D
Sbjct: 58 HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRL--FSITAIGAGELHSLALKSD 115
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSVE 180
G ++G N +GQLG G++ + P+PV L + V A A G AD TVW
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAPVPGL-TNVVAIAAGFSHSMVLKADGTVW----- 169
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
GL GQLG GT T P + L G + +A G H
Sbjct: 170 -----AWGLNAAGQLGDGTPTRRLT--------------PVQVLGLTG--VKDIAAGNVH 208
Query: 241 TVAVDSKGYVYTWGFGGYGRLG 262
++A+ + G ++TWG G+LG
Sbjct: 209 SLALTADGRLWTWGGNVDGQLG 230
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 134/301 (44%), Gaps = 51/301 (16%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AGR H++V+ DG ++G N +GQLG+GS R P+ V L S +TA G ++ L
Sbjct: 54 AGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFS-ITAIGAGELHSLAL 112
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-IVKVA 235
S ++ + G GQLG GT L + P P + G T +V +A
Sbjct: 113 KS--DGTVWSWGANTNGQLGDGT------------LISRSVPAP-----VPGLTNVVAIA 153
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAG 293
G +H++ + + G V+ WG G+LG RR+ Q VL V I+AG
Sbjct: 154 AGFSHSMVLKADGTVWAWGLNAAGQLGDGTPT-----RRLTPVQ---VLGLTGVKDIAAG 205
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMHHF 344
+V+S G+L+ WG N D + L ++G + + G H
Sbjct: 206 NVHSLALTADGRLWTWG---GNVDGQLGTGDLVGRSTAAALPGMTG--VVALSGGGSHSL 260
Query: 345 V-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VDR 402
+ D S SWG G+LG G S+ P +V L M ++V G HS+ + VD
Sbjct: 261 ILKMDGSVWSWGKNDAGQLGLGSV--VSTPTPTQVPGLTEM--VAVTGGGQHSVALRVDG 316
Query: 403 T 403
T
Sbjct: 317 T 317
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 146/382 (38%), Gaps = 64/382 (16%)
Query: 38 GALDGNLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L V+PTR P ++ V+ H +A+ +G + WGR + + +
Sbjct: 528 GQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQD--TCADPENV 585
Query: 97 QRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
R P V L+ +AG R H+VV+ DG A+G N GQL G+ + + P+
Sbjct: 586 GRVLRVPEQVQGLTDAVAVRAG--RCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPA 643
Query: 155 PVRCLVSEVTAT-------ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
V L ++ + A AD T W G GQLG G
Sbjct: 644 RVDGLTGVISFSVGSEQTLALKADGTAW----------AWGPNAQGQLGGGL-------- 685
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
+ PR R + VA G H + + ++ WG G++G
Sbjct: 686 --------SVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALD 737
Query: 268 DEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
+ P R + + + GSV S+ GQL GD ++P+
Sbjct: 738 WQAAPVRSGLAASRGLAAATQYSLGIALDGSVQSTGANASGQL---------GDGTLFPR 788
Query: 324 ----PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P++ LS R + G H + D +SWG GELG G + + P V
Sbjct: 789 AEPVPVIGLS--ECRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRA--PAVV 844
Query: 379 DILEGMHVISVACGYGHSLVIV 400
L G V+S+A G HSL ++
Sbjct: 845 GPLAG--VLSIAVGARHSLALL 864
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R A + H +A+ +G + WG N G +G G + R +P VS +G
Sbjct: 449 RVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVS--GTLVAMTVASG 506
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSI---RNEIEPSPVRCLVSEVTATACG------ 169
H++ ++ DG+ A+G N GQLG G++ RN P V L V+ A G
Sbjct: 507 NFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRN--APFRVPNLEGVVSLAAGGEHSLAL 564
Query: 170 -ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
AD TVW+ +G+ D E + +++ + Q A+A AG
Sbjct: 565 KADGTVWV---------------WGRQDTCADPENVGR--VLRVPEQVQGLTDAVAVRAG 607
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
C H+V + + G ++ WG G+L D P RVD
Sbjct: 608 R------C---HSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVD 646
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVIS 291
V G +H++ + + G V++WG YG+LG + +P RV +F I
Sbjct: 51 SVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFSIT-------AIG 103
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMHHFV 345
AG ++S G ++ WG N GD + P P+ L+ N+ + +G H V
Sbjct: 104 AGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLT--NVVAIAAGFSHSMV 161
Query: 346 -GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
AD + +WG G+LG G ++ + P +V L G V +A G HSL +
Sbjct: 162 LKADGTVWAWGLNAAGQLGDGTPTRRLT--PVQVLGLTG--VKDIAAGNVHSLAL 212
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTI 103
++P ++ L GV A H +AV G+ + WGRN+ GQ+G G K + P
Sbjct: 989 LAPVQVTSLTGVS----ALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQ 1044
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
V L+ + AG G H++ + D + A+G GQLG+G + + SPV+
Sbjct: 1045 VPGLTS-AVAVAGGGE-HSLALLSDRSVWAWGHGDMGQLGTG--MSNLRLSPVQV 1095
>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
Length = 1060
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIV--SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y G N GQLG GD+ R P V S L K ++ G S++VVV G + G N
Sbjct: 35 YACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGKN 93
Query: 138 KHGQLGSGSIRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
HGQLG G E P V L V V A GA L+ + + + G GQL
Sbjct: 94 VHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHT---LALDDRGRVYSWGRGDEGQL 150
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG A+EA P PR IA L ++V V G H++A+D+ G VY+WG
Sbjct: 151 GHG--------------AFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADGAVYSWGC 195
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G LGH +++ + PR V+ F+ P A +S GS +++ G L WG
Sbjct: 196 GDDGALGHGDRRRQLAPRAVEFFKTR----PAAAVSCGSRHNAVVTADGALVTWG 246
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R VA H +A+D GR Y+WGR + GQLGHG P ++ L + GA
Sbjct: 118 VRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLPT-SVVAVGA 176
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
GR+H++ + DG ++G G LG G R ++ P V A +CG+ +
Sbjct: 177 GRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVV 236
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
++ +GA ++ G YGQ G + + + V L + G V AC
Sbjct: 237 TA-DGA-LVTWGWAAYGQCGASAGGD-GLRPAEVPLPGD-----------GGAECVLAAC 282
Query: 237 GTNHTVAVD---SKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVI-- 290
G HT+ S ++ +G+ YG+ G PRRV F + AV+
Sbjct: 283 GYRHTLCATRHASGDAIWAFGWNAYGQCGGSTCSAA-APRRVGGKFLGSQEGGDGAVVEA 341
Query: 291 -SAGSVNSSCTA----GGGQLYMWGKLKNNGDD 318
SAG +S C GG Y WG+ GDD
Sbjct: 342 LSAGGRHSVCCVRLPGGGTATYAWGR----GDD 370
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S + V V V G+ + G+N GQLGHG + + P +V L ++ A +HT+
Sbjct: 74 CGSSYSVVV-VAGQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLA 132
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
+ + G ++G GQLG G+ E P P R + A GA T L+ ++
Sbjct: 133 LDDRGRVYSWGRGDEGQLGHGAF--EAVPHPRRIARLPTSVVAVGAGRTHSLALDADGAV 190
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G G LGHG D +LA PRA+ V+CG+ H V
Sbjct: 191 YSWGCGDDGALGHG--------DRRRQLA------PRAVEFFKTRPAAAVSCGSRHNAVV 236
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ G + TWG+ YG+ G D P V +
Sbjct: 237 TADGALVTWGWAAYGQCGASAGGDGLRPAEVPL 269
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 15/223 (6%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA G H +A+D +G Y+WG + G LGHGD+ ++ P V G
Sbjct: 172 VAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSR 231
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLS 177
H VVT DG + +GW +GQ G+ + + + P+ V +E ACG T+ +
Sbjct: 232 HNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCAT 291
Query: 178 -SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
G +I G YGQ G T + + K + G + ++
Sbjct: 292 RHASGDAIWAFGWNAYGQCGGSTCSAAAPRRVGGKFLGSQE-------GGDGAVVEALSA 344
Query: 237 GTNHTV-AVDSKG---YVYTWGFGGYGRLGHREQKDEWVPRRV 275
G H+V V G Y WG G G+LG +++D RV
Sbjct: 345 GGRHSVCCVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRV 387
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V + ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVSIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P +
Sbjct: 226 RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E V+ + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVVEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 34/292 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA GA + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQETASIRKACVFGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+ L + V+S G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
+ + G H D + +WG YG+LG G S P V+
Sbjct: 231 QSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE 282
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALQSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + ++ A +HT
Sbjct: 276 PTPIMVEKERVVEIAACHSTHT 297
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 54/185 (29%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV--- 121
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N+L + V ++ GS +S A G++
Sbjct: 122 -CTNLLIKQVVEVACGSHHSMALAADGEV------------------------------- 149
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
+WG+ G++G G + + P+KV L V+S+ACG S
Sbjct: 150 --------------FAWGYNNCGQVGSGSTANQPT--PRKVTSCLHTKRVVSIACGQTSS 193
Query: 397 LVIVD 401
+ ++D
Sbjct: 194 MAVLD 198
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ C H V +G Y+WG G+LGHG +P
Sbjct: 298 DYLVPKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ L+ I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG +
Sbjct: 416 EGIHVSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDRASLSV------------- 460
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 461 -PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 519
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+VP V V P ++ G + G +Y ++G+L N D +
Sbjct: 520 DSRFVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G G P V+
Sbjct: 576 PVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG--GTDDKNTPTLVE 633
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 634 ALKDKQVRSVVCGINFTAAI 653
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 302 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ + L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRASLSVPREVESLKGLRTV 473
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 474 RAACGVWHTAAVVE 487
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQ 89
+L P + L G +R V A C H AV G+ +TWG ++G+
Sbjct: 456 ASLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGR 513
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK R PT V+ L + + G TV +T G+ G +GQLG+ G
Sbjct: 514 LGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADG 573
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +E + V E++ CGA L+S + G G+LGHG ++ NT
Sbjct: 574 LLPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGGTDDKNT 628
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + V CG N T A+
Sbjct: 629 --------------PTLVEALKDKQVRSVVCGINFTAAI 653
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ C H V +G Y+WG G+LGHG +P
Sbjct: 298 DYLVPKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ L+ I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG +
Sbjct: 416 EGIHVSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDRASLSV------------- 460
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 461 -PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 519
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+VP V V P ++ G + G +Y ++G+L N D +
Sbjct: 520 DSRFVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G G P V+
Sbjct: 576 PVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG--GTDDKNTPTLVE 633
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 634 ALKDKQVRSVVCGINFTAAI 653
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 302 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ + L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRASLSVPREVESLKGLRTV 473
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 474 RAACGVWHTAAVVE 487
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQ 89
+L P + L G +R V A C H AV G+ +TWG ++G+
Sbjct: 456 ASLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGR 513
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK R PT V+ L + + G TV +T G+ G +GQLG+ G
Sbjct: 514 LGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADG 573
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +E + V E++ CGA L+S + G G+LGHG ++ NT
Sbjct: 574 LLPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGGTDDKNT 628
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + V CG N T A+
Sbjct: 629 --------------PTLVEALKDKQVRSVVCGINFTAAI 653
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 142/334 (42%), Gaps = 57/334 (17%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +++ L GV VA S H +AV +G + WG N GQLG G R P V
Sbjct: 191 PVQVQGLSGV----VAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQG 246
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-- 164
LS + AG H++ V DG +G N QLG GS+R + P+ V+ L + V
Sbjct: 247 LSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMR-LLVPAQVQGLSAVVAVA 303
Query: 165 -----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A G+D TVW G GQLG GT Y P
Sbjct: 304 AGDTHSLAVGSDGTVWA----------VGSNNNGQLGDGTTT------------YRLVPV 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P L+G +V VA H++AV S G V+ WG+ G+LG VP +V
Sbjct: 342 P----VLSG--VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQV---- 391
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNL 333
+ L + AG +S G + WG +G P P + LSG +
Sbjct: 392 --SGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSG--V 447
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ SG+ H + +D + +WG+ +G+LG GP
Sbjct: 448 GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGP 481
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 144/340 (42%), Gaps = 39/340 (11%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H +A+ +G + WG N GQLG G P V ++ AG SH++ V
Sbjct: 5 SSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVR 64
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
DG A+G N GQLG + + P V L S V A G+ L+ ++
Sbjct: 65 SDGTVWAWGSNASGQLGDETTISRSTPVQVLGL-SGVLFVAAGSSHV--LALRYDGTVWA 121
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQ G GT N L +AQ L+G ++ VA G NH++AV S
Sbjct: 122 WGSNSSGQRGDGTTNNR-------ALPVQAQ-------GLSG--VMAVAAGDNHSLAVRS 165
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G + WG G+LG + P V V + V+ ++AGS +S G +
Sbjct: 166 DGSAWAWGSNASGQLGEGTTSNR--PEPVQVQGLSGVV----AVAAGSAHSLAVRSDGTV 219
Query: 307 YMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
+ WG + GD D + P + LSG + + +G+ H V D + WG
Sbjct: 220 WAWGANASGQLGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDS 277
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG G +P +V L V++VA G HSL +
Sbjct: 278 NQLG---KGSMRLLVPAQVQGLSA--VVAVAAGDTHSLAV 312
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 41 DGNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
D N + +R LV ++ VA H +AV +G + G N GQLG G
Sbjct: 276 DSNQLGKGSMRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT 335
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
R P V + A H++ V DG A+G+N GQLG G+ + P V
Sbjct: 336 YRLVPVPVLS----GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQV 391
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L SEV + G + L+ S + G YGQLG G+
Sbjct: 392 SGL-SEVVSVVAGGYHS--LAVRSDGSAWDWGSNAYGQLGDGSTTYL------------- 435
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P P + L+G + VA G++H++A+ S G V+TWG+ +G+LG+
Sbjct: 436 -PVPVRVQQLSG--VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGN 479
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 158/359 (44%), Gaps = 49/359 (13%)
Query: 52 PLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
P+ G +D+ ++AG H +A+ +G + WG N GQLG G I R P V +L+
Sbjct: 341 PVFGLIDVVALSAGY--SHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPDLTD- 397
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ AG SH++ + DG A+G N GQLG G+ + + P V L ++V A + G
Sbjct: 398 -VVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDL-TDVVALSAGG 455
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ T+ L + ++ G GQLG GT PR + L
Sbjct: 456 NHTLALRT--NGTVWAWGSNSDGQLGDGT----------------TTPRLSPVQMLGLTN 497
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-----HREQKDEWVPRRVDVFQRNNVLP 285
+V ++ G H++AV + G V+ WG G+LG HR + VP DV
Sbjct: 498 VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQ-VPGLTDVV------- 549
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNM 341
+SAG +S G ++ WG ++ GD P+ P+ ++ + +G
Sbjct: 550 ---ALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTDVVALSAGGA 606
Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + D + +WG YG+LG G + P V L G ++ G GHSL +
Sbjct: 607 HSLALRTDGTVWAWGSNYYGQLGDGTTTPR--LFPVLVSNLTGTS--NLYAGAGHSLAL 661
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 147/337 (43%), Gaps = 36/337 (10%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H +A+ +G + WG N GQLG G R P V L+ + AG H + +
Sbjct: 6 SHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLT--DVVALSAGNHHCLALRT 63
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG A+G N GQLG G+ + V L ++V A + G+ +T+ L + ++
Sbjct: 64 DGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGL-TDVVALSAGSSYTLALRT--DGTVWAW 120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YGQLG GT PR + +V ++ G H++A+ +
Sbjct: 121 GYNFYGQLGDGT----------------TTPRLAPVQVPGLTDVVALSSGIYHSLALRTD 164
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+ WG G+LG D RR+ Q L +SAG +S G ++
Sbjct: 165 GTVWAWGDNASGQLG-----DGTATRRLSPVQVPG-LTDVVALSAGGYHSLAVRTDGTVW 218
Query: 308 MWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
WG + GD P+ P+ N+ + + + + + D + +WG+ YG+L
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL 278
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G + S P +V L +V++++ GY HSL +
Sbjct: 279 GDGTTTPRLS--PVQVPGLT--NVVALSAGYSHSLAL 311
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 38/348 (10%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ ++AG + HC+A+ +G + WG N GQLG G R V L+ +
Sbjct: 47 DVVALSAG--NHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALS 102
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG S+T+ + DG A+G+N +GQLG G+ + P V L ++V A + G ++ L
Sbjct: 103 AGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGL-TDVVALSSGIYHSLAL 161
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ ++ G GQLG GT + P + L +V ++
Sbjct: 162 RT--DGTVWAWGDNASGQLGDGTATR--------------RLSPVQVPGL--TDVVALSA 203
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G H++AV + G V+ WG G+LG P V V NV+ +SA
Sbjct: 204 GGYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSP--VQVSGLTNVV----ALSADDSY 257
Query: 297 SSCTAGGGQLYMWG--KLKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
+ G ++ WG GD P+ P+ N+ + +G H + D +
Sbjct: 258 TLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTV 317
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG+ G+LG G Q+S ++P + + V++++ GY HSL +
Sbjct: 318 WAWGYNYNGQLGNGIPTQRSPSIP----VFGLIDVVALSAGYSHSLAL 361
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 44/362 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+SP ++ L D+ ++AG H +AV +G + WG N GQLG G R P V
Sbjct: 187 LSPVQVPGLT--DVVALSAG--GYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPVQV 242
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
S L+ + A S+T+ + DG A+G+N +GQLG G+ + P V L + V
Sbjct: 243 SGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVV- 299
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A ++ L+ ++ G GQLG+G + R +I
Sbjct: 300 --ALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ----------------RSPSIP 341
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+V ++ G +H++A+ + G V+ WG+ G+LG P V V +V+
Sbjct: 342 VFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPR--PSPVQVPDLTDVV 399
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDS 338
+SAG +S G + WG + GD + P + DL+ ++ + +
Sbjct: 400 ----ALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLT--DVVALSA 453
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + + + +WG G+LG G ++ V +L +V++++ GY HSL
Sbjct: 454 GGNHTLALRTNGTVWAWGSNSDGQLGDG----TTTPRLSPVQMLGLTNVVALSAGYYHSL 509
Query: 398 VI 399
+
Sbjct: 510 AV 511
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 96/238 (40%), Gaps = 27/238 (11%)
Query: 28 TCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
T W G L +P RL P+ + + VA H +AV +G + WG N
Sbjct: 466 TVWAWGSNSDGQLGDGTTTP-RLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNS 524
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
GQLG G R P V L+ + AG SH++ + DG A+G N QLG G+
Sbjct: 525 DGQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGT 582
Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
P V L V +A GA L+ ++ G YGQLG GT
Sbjct: 583 TTPRGSPVQVPGLTDVVALSAGGAHS---LALRTDGTVWAWGSNYYGQLGDGT------- 632
Query: 207 DSSVKLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
PR P ++ L G + + G H++A+ + G WG G+LG
Sbjct: 633 ---------TTPRLFPVLVSNLTGTS--NLYAGAGHSLALRTDGTGRAWGNNYGGQLG 679
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ ++AG H +A+ +G + WG N GQLG G R P +VS L+ AG
Sbjct: 597 DVVALSAG--GAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLTGTSNLYAG 654
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
AG H++ + DG A+G N GQLG G+ + P V
Sbjct: 655 AG--HSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4036 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4092
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4093 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ + SV+G+ + G YG+
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4211
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4212 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4258 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4313
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4314 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3988 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4044
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4103
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4104 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4149
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4175
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V D S + ++G YG+LG G
Sbjct: 4176 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4219
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4220 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4247
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ +S G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----VSIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4275 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4333 LQGKNVRQISAGRCHSAAWT 4352
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 27/236 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
P +R LV + V C + H +A+ G Y+WG N GQLG + Q + P
Sbjct: 130 PKIVRYLVSKTV--VQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMR 187
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVS 161
++ L G +HT ++++ +S FGW N GQLG N P+ ++ L +
Sbjct: 188 LTTLLGIPAAAIACGGNHTFLISK--SSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRT 245
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V ACG +F+V+L++ G AG YGQLGHG + + P
Sbjct: 246 LGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSN--------------EMLP 289
Query: 221 RAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
R + L G TI +VACG HT+A V S+G +Y +G G G+LG R K +P+ V
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 36/334 (10%)
Query: 80 YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG GQLG G + Q P+ + + + G HT+ +T G A G N
Sbjct: 4 YCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSN 63
Query: 138 KHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG + ++ + V +T ACG+ ++ L+ E +L+ G + GQLG
Sbjct: 64 DYSQLGHELPTKRPLQIPELEDYV--ITQIACGSRHSMALT--EWGQVLSWGDNECGQLG 119
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
H +D + ++L P+ + L +T+V++ACG NH++A+ G +Y+WG
Sbjct: 120 HASDQD------VIQL-------PKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSN 166
Query: 257 GYGRLGHR---EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + E P R+ + P A I+ G ++ + ++ WG+
Sbjct: 167 IYGQLGVKSPSELSQCNYPMRLTTL----LGIPAAAIACGGNHTFLISKSSAVFGWGRNN 222
Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGP 366
N+ + YP L L +R + G+ F+ + + G YG+LG+G
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG- 281
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+ V L G + VACG H+L +V
Sbjct: 282 -FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 62 AAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
A V+C H + + G+ Y G N+ QLGH ++ RP + EL Y I + G
Sbjct: 37 AVNQVACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACG 94
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWL 176
H++ +TE G L++G N+ GQLG S ++ I+ P VR LVS+ V ACG + ++ L
Sbjct: 95 SRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL 154
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + + G YGQLG + +E + + P + L G +AC
Sbjct: 155 TCC--GELYSWGSNIYGQLGVKSPSELSQCN-----------YPMRLTTLLGIPAAAIAC 201
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G NHT + V+ WG G+LG ++ + P ++ + V ++ G
Sbjct: 202 GGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGV----RFVACGDEF 257
Query: 297 SSCTAGGGQLYM-----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
S G ++ +G+L + + M P+ +M+L G + + GN H
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRH 309
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVE 76
GEL GS + +G + + P RL L+G+ A ++C H +
Sbjct: 158 GELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGI-----PAAAIACGGNHTFLISKS 212
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
+ WGRN GQLG D+ R PT + L ++ G +V +T +G G
Sbjct: 213 SAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGA 272
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+GQLG G NE+ P V L+ S ++ ACG T+ L G I GL GQL
Sbjct: 273 GAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRG-RIYGFGLGSSGQL 331
Query: 196 G 196
G
Sbjct: 332 G 332
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
VSC HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H
Sbjct: 24 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 83
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
+ ++ G +G N GQLG ++ P V+ L ++ V +CG + T L+
Sbjct: 84 SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G AG GQLGHG+ N+ + PR + L G + ++ACG H
Sbjct: 144 GVFTFGAG--SCGQLGHGSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187
Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
T+A V S G +Y +G G G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 62 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG GS+ +E+ P V L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVT 179
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
ACG T+ G I G GQLG G
Sbjct: 180 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL 159
P ++ +L++ I + G H + + DG +G N HGQLG G ++ P VR L
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 69
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
A + S+ GA + G+ GQLG + + +
Sbjct: 70 EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + L + +V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 170
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
PR I L +TI++V+CG H +A+ + G +TWG +G+LG +E + P+RV
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 69
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
+ P A ++AG +S + G ++ WG + N G D P + L
Sbjct: 70 EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124
Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H V S ++G G+LG+G + + P++V L G V +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVN--PRRVLELMGSEVTQIA 182
Query: 391 CGYGHSLVIV 400
CG H+L V
Sbjct: 183 CGRQHTLAFV 192
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGHG P V
Sbjct: 114 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL 171
Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLG G + + +Q P+ + +L G + +VA G H+ A+ G V+
Sbjct: 48 HGQLGLGKE-------------FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
WG G+LG ++KD P V + + V+ IS G +++ G ++ +
Sbjct: 95 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150
Query: 310 ---GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
G+L + + +D + P+ +++L G + + G H FV + ++G G+LG
Sbjct: 151 GSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Query: 364 YG 365
G
Sbjct: 211 TG 212
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ C H V +G Y+WG G+LGHG +P
Sbjct: 298 DYLVPKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ L+ I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG +
Sbjct: 416 EGIHVSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDRASLSV------------- 460
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 461 -PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 519
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+VP V V P ++ G + G +Y ++G+L N D +
Sbjct: 520 DSRFVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G G P V+
Sbjct: 576 PVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG--GTDDKNTPTLVE 633
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 634 ALKDKQVRSVVCGINFTAAI 653
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 302 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ + L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G + S ++P++V+ L+G+ +
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRASLSVPREVESLKGLRTV 473
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 474 RAACGVWHTAAVVE 487
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQ 89
+L P + L G +R V A C H AV G+ +TWG ++G+
Sbjct: 456 ASLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGR 513
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK R PT V+ L + + G TV +T G+ G +GQLG+ G
Sbjct: 514 LGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADG 573
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +E + V E++ CGA L+S + G G+LGHG ++ NT
Sbjct: 574 LLPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGGTDDKNT 628
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + V CG N T A+
Sbjct: 629 --------------PTLVEALKDKQVRSVVCGINFTAAI 653
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 169/371 (45%), Gaps = 51/371 (13%)
Query: 41 DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
DG L + P +++ L GV VA G + H +A+ +G + WG N+ GQLG G I
Sbjct: 128 DGTLSTRGDPVQVQGLSGVTT--VALG--ATHSLALCYDGSVWAWGANDHGQLGDGTSIA 183
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P +V+ L ++ AG +H++ V DG A+G N GQLG G+ P P++
Sbjct: 184 RRTPQMVAGLQ--EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQ 241
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L S + A A G + L+ ++ G GQLG G+ ++
Sbjct: 242 GL-SGIVAVASGTSHS--LALRYDGNVWAWGSNYSGQLGDGSS--------------LSR 284
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + L+G IV V G ++++AV G V+TWG YG+LG + R V V
Sbjct: 285 SSPVQVTELSG--IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTT----IARSVPV 338
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDD----WMYPKPLMDLSGW 331
+ + L ++AG ++ ++ WG N GD+ + P+ +++
Sbjct: 339 --QTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILN---- 392
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ M + N H V +D +WG G+LG G K+ P +V +V+SVA
Sbjct: 393 EVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGT--TKNRWAPAEVL----GNVVSVA 446
Query: 391 CGYGHSLVIVD 401
G HSL + D
Sbjct: 447 AGRRHSLAVRD 457
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 147/349 (42%), Gaps = 40/349 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
V + H +AV +G + WG N GQLG G R P V + AGR
Sbjct: 394 VVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG----NVVSVAAGR 449
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H++ V +DG+ A+G N GQLG G+ + P V +S + + A G+D++V L
Sbjct: 450 RHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPG-ISGIASVAAGSDYSVALRYD 508
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ G YGQLG GT + P + L+G IV +A G
Sbjct: 509 R--TLWAWGENSYGQLGDGTTVNRHV--------------PTRVQGLSG--IVAIATGNG 550
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H +AV S G V+ WG G+LG + P +V VL ++AG+ +S
Sbjct: 551 HMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQV------QVLSGIVAVAAGAAHSLA 604
Query: 300 TAGGGQLYMWG--KLKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHH--FVGADSSCISW 354
G L+ WG GD P+ + + G S HH V AD + W
Sbjct: 605 VRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVSAAKHHSLAVLADGTLWDW 664
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMH----VISVACGYGHSLVI 399
G YG+LG ++ P KV L G+ + G+GHSL +
Sbjct: 665 GANNYGQLGRNQ--DNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLAL 711
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PTR++ L G+ VA + H +AV G + WG N GQLG G I R P V
Sbjct: 533 PTRVQGLSGI----VAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQV 588
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS AGA +H++ V DG A+G N QLG G+ + P+ V+ + S V +
Sbjct: 589 LSGIVAVAAGA--AHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVS 646
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A L+ + ++ + G YGQLG DN P P + L
Sbjct: 647 AAKHHS---LAVLADGTLWDWGANNYGQLGRNQDNT--------------NPTPSKVTTL 689
Query: 227 AGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
G T + G H++A+ S GY+ WG YG+LG
Sbjct: 690 TGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLG 729
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 38/290 (13%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
+G ++ V DG A+G N GQLG G++ +P V+ L S VT A GA + L
Sbjct: 101 SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGL-SGVTTVALGATHS--L 157
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ S+ G +GQLG GT A+ P+ +A L + +V VA
Sbjct: 158 ALCYDGSVWAWGANDHGQLGDGTS--------------IARRTPQMVAGL--QEVVAVAA 201
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G NH++AV S G V+ WG G+LG V RRV V + L +++G+ +
Sbjct: 202 GANHSLAVLSDGTVWAWGENYDGQLGDGTT----VTRRVPVPIQG--LSGIVAVASGTSH 255
Query: 297 SSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
S G ++ WG + GD P + +LSG + ++ G + V D
Sbjct: 256 SLALRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVTELSG--IVSVEGGPDYSMAVRYDG 313
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ +WG YG+LG G +S +P + L G V++VA G H+L +
Sbjct: 314 TVWTWGINTYGQLGDGTTIARS--VPVQTSGLSG--VVAVAAGRTHALAM 359
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VA H +AV +G + WG N GQLG P+ V+ L+ G S
Sbjct: 643 VAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYS 702
Query: 121 ----HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
H++ + DG + +G N +GQLG+G N P PV L+
Sbjct: 703 IGFGHSLALRSDGYLVGWGHNTYGQLGTGVPEN--IPVPVLSLL 744
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 169/394 (42%), Gaps = 72/394 (18%)
Query: 28 TCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
T W R G L DG + + P ++ L GV V + HCVA+ G +TWG
Sbjct: 220 TVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGV----VTLSAGASHCVALRSNGTAWTWG 275
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G QR P +++ + A AG H++ V DG A+G N++ QLG
Sbjct: 276 LNTMGQLGDGTTTQRSVP---AQVGLTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLG 332
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQL 195
+G++ + + P++ +S G AD TVW + G +GQL
Sbjct: 333 NGNMTSSLL--PIQAGLSGGITLVAGFKHSLTLRADGTVW----------SWGDNVFGQL 380
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GT Y + S V++A P VA G H+V DS G V++WG
Sbjct: 381 GDGT---YQPRMSPVRVATTTLGNP------------GVASGQLHSVYRDSAGRVWSWGD 425
Query: 256 GGYGRLGHREQKDEWVPRR------VDVFQRNN---VLPPEAVISAGSVNSSCTAGGGQL 306
G+LG+ D+ P V V N VL + + A VNS G G
Sbjct: 426 NEDGQLGNGIGADKLTPALTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDG-- 483
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
N + P ++ LSG + + +G H + D + +WG +YG+LG G
Sbjct: 484 -------TNANT-SQPVRVLGLSG--ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNG 533
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G P +V L G V ++A G+ HSL +
Sbjct: 534 --GTVDQNQPVQVAGLSG--VTAIAAGHSHSLAL 563
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 49/275 (17%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+ N P R+ L G I ++AG + H +A+ +G + WG N GQLG+G + +++
Sbjct: 485 NANTSQPVRVLGLSG--ITAISAG--AYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQ 540
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL- 159
P V+ LS + AG SH++ + DG A+G+N GQ+GSG+ N PV+ +
Sbjct: 541 PVQVAGLSG--VTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGT--NNWHILPVQAVG 596
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT-------------- 205
+S VTA G ++ L S ++ + G GQLG+G N
Sbjct: 597 LSSVTAITAGGYHSLALRS--DGTVWSWGYNGSGQLGNGALASLNAPGPVSNLTGVVSIA 654
Query: 206 ----------KDSSVK---LAYEAQP---------RPRAIAALAGETIVKVACGTNHTVA 243
D +V+ ++ Q P +A ++G +V V G +H++A
Sbjct: 655 AGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAGMSG--VVSVIAGDHHSMA 712
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ S G + WG G+LG + D +P RV++F
Sbjct: 713 MRSDGTTWAWGANTEGQLGDGTRNDSIIPVRVELF 747
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 54/345 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + +G ++WG N GQLG G R P V+ + A +G+ H+V
Sbjct: 359 HSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGVA-SGQLHSVYRDSA 417
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-------CGADFTVWLSSVEG 181
G ++G N+ GQLG+G +++ P+ + L V+ A D TVW V
Sbjct: 418 GRVWSWGDNEDGQLGNGIGADKLTPA-LTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVN- 475
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
G++G GT+ NT +P + L+G I ++ G H+
Sbjct: 476 ---------SRGEVGDGTN--ANTS------------QPVRVLGLSG--ITAISAGAYHS 510
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A+ + G V+ WGF YG+LG+ D+ P +V L I+AG +S
Sbjct: 511 LALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAG------LSGVTAIAAGHSHSLALC 564
Query: 302 GGGQLYMWG-----KLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
G G ++ WG ++ + ++W + P + LS ++ + +G H + +D + SW
Sbjct: 565 GDGTVWAWGYNFDGQIGSGTNNWHILPVQAVGLS--SVTAITAGGYHSLALRSDGTVWSW 622
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+ G+LG G ++ P V L G V+S+A G HSL +
Sbjct: 623 GYNGSGQLGNGALASLNA--PGPVSNLTG--VVSIAAGDYHSLAL 663
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 145/347 (41%), Gaps = 60/347 (17%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V V +G + WG N +GQLG+G P V L+ +G SH++ + D
Sbjct: 61 HSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTD--AVAVASGDSHSLALRSD 118
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G A+G N GQLG+GS EP V+ L S V + A G + L S ++ G
Sbjct: 119 GTVWAWGDNYSGQLGTGSTAVSAEPVQVQGL-SGVLSVASGFAHSAALRS--DGTVWAWG 175
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+Y QLG L + P + L G ++ VA G N T+A+ + G
Sbjct: 176 DNRYRQLG--------------PLTAGSSSVPVQVPGLGG--VIAVAAGGNTTLALRADG 219
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG G+LG D V R + Q VL V++ + S C A
Sbjct: 220 TVWAWGDNRSGQLG-----DGTVTTRGNPLQ---VLGLTGVVTLSAGASHCVA------- 264
Query: 309 WGKLKNNGDDWMYPKPLMDLSG---------------WNLRCMDSGNMHHF-VGADSSCI 352
L++NG W + M G ++ +GN H V +D +
Sbjct: 265 ---LRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVW 321
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+WG +Y +LG G SS +P + + G I++ G+ HSL +
Sbjct: 322 AWGDNRYRQLGNG--NMTSSLLPIQAGLSGG---ITLVAGFKHSLTL 363
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 147/351 (41%), Gaps = 42/351 (11%)
Query: 36 RKGALDGNLV--SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
R+G L L SPT ++ D VA+G H +A+ +G + WG N GQLG G
Sbjct: 78 RQGQLGNGLFTNSPTPVKVKNLTDAVAVASG--DSHSLALRSDGTVWAWGDNYSGQLGTG 135
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P V LS + +G +H+ + DG A+G N++ QLG + + P
Sbjct: 136 STAVSAEPVQVQGLS--GVLSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVP 193
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L V A A G + T L+ ++ G + GQLG GT
Sbjct: 194 VQVPGL-GGVIAVAAGGNTT--LALRADGTVWAWGDNRSGQLGDGT-------------- 236
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+ P + L G +V ++ G +H VA+ S G +TWG G+LG VP
Sbjct: 237 VTTRGNPLQVLGLTG--VVTLSAGASHCVALRSNGTAWTWGLNTMGQLGDGTTTQRSVPA 294
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPLM-DL 328
+V L AG+ +S G ++ WG + NG+ P+ L
Sbjct: 295 QVG-------LTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGL 347
Query: 329 SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
SG + +G H + AD + SWG +G+LG G Y + S P +V
Sbjct: 348 SG--GITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMS--PVRV 394
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 35/296 (11%)
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
+ + + G+ H+V V DG+ A+G+N+ GQLG+G N P V+ L V A A
Sbjct: 49 RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTDAV-AVAS 107
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G ++ L S ++ G GQLG G+ P + L+G
Sbjct: 108 GDSHSLALRS--DGTVWAWGDNYSGQLGTGST--------------AVSAEPVQVQGLSG 151
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
++ VA G H+ A+ S G V+ WG Y +LG VP +V L
Sbjct: 152 --VLSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVP------GLGGVI 203
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF 344
++AG + G ++ WG ++ GD + + PL L + + +G H
Sbjct: 204 AVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGVVTLSAGASHCV 263
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ ++ + +WG G+LG G Q+S +P +V + + V++ G HSL +
Sbjct: 264 ALRSNGTAWTWGLNTMGQLGDGTTTQRS--VPAQVGLTD---VMAAVAGNYHSLAV 314
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 218 PRPRAIAALAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + AALAG ++ +++ G H+V V S G V+ WGF G+LG+ + P +V
Sbjct: 38 PVDQTRAALAGRASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKV- 96
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP--LMDLSG 330
+N L +++G +S G ++ WG + G + +P + LSG
Sbjct: 97 ---KN--LTDAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG 151
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + SG H + +D + +WG +Y +L GP SS++P +V L G VI+V
Sbjct: 152 --VLSVASGFAHSAALRSDGTVWAWGDNRYRQL--GPLTAGSSSVPVQVPGLGG--VIAV 205
Query: 390 ACGYGHSLVI 399
A G +L +
Sbjct: 206 AAGGNTTLAL 215
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ + SV+G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V D S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P ++ G G HTV V +DG G N
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + G YGQ+G
Sbjct: 64 GQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAVYGQIGLS 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T EY +++ PR I +L+ IV+VACG +H++A+ +++WG Y
Sbjct: 120 TAEEY------IRV-------PRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K E PR + P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
+ D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+L V
Sbjct: 283 VN--PRKVFELMGSIVTQIACGRQHTLAFV 310
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 35 RRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RRK GALD ++ VA C H +A++ +G+ ++WG GQ+
Sbjct: 72 RRKPEQVGALDAQII---------------VAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 91 GHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIR 148
G + R P + LS +I + G H++ +++D + ++G N++GQLG G I+
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
E P ++ L A + ++ GA I G ++GQLG + + N
Sbjct: 177 KECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA-IFGWGRNKFGQLGLTDETDRNV--- 232
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
P + +L + I+ + CG +HT A+ +G V+T+G GGYG+LGH
Sbjct: 233 -----------PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281
Query: 269 EWVPRRV 275
E PR+V
Sbjct: 282 EVNPRKV 288
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 38/368 (10%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+L G+T + +G G +D +V P R + ++R V GC S H V V +G Y
Sbjct: 1 MLCWGNTSFGQLGL--GGIDEEVVLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVY 56
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
T G N+ GQLGH DK R +P V L I G +HT+ + + G ++G +G
Sbjct: 57 TCGCNDLGQLGH-DK-SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 141 QLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
Q+G + I P ++ L ++ ACG ++ LS + + I + G QYGQLG G
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS--KDSDIFSWGQNQYGQLGLG 172
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
L + + PR I +L+G +A G H+ A+ G ++ WG +
Sbjct: 173 -------------LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGK 311
G+LG ++ D VP + + ++ A+ G V + G GQL
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG---- 275
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ + + P+ + +L G + + G H FV + S+G G+LG G
Sbjct: 276 -HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTIN 334
Query: 370 KSSAMPKK 377
+ S K
Sbjct: 335 RKSPFTVK 342
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 3980 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4036
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4037 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4096
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ + SV+G+ + G YG+
Sbjct: 4097 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4155
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4156 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4201
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4202 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4257
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4258 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4291
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3932 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3988
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4047
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4048 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4093
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4094 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4119
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V D S + ++G YG+LG G
Sbjct: 4120 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4163
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4164 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4191
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4219 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4276
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4277 LQGKNVRQISAGRCHSAAWT 4296
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 34/302 (11%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G E+ G C +G G + V P +L L G + ++ G +A D +G+
Sbjct: 160 GNEVFVFGLNCSSCLGTGDGL---STVMPKKLDFLRGKKVASLSYGSGPHVLLATD-DGQ 215
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG N QLG+G P +++ L K+K+ G H++ +T DG A+G+N
Sbjct: 216 LFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGYN 275
Query: 138 KHGQLGSGSIRNEIEPSPVR-CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ+GSGS N+ P V CL + + CG T ++ V+ + G GQL
Sbjct: 276 NCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQ--TSSMALVDNGEVYGWGYNGNGQL 333
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G + Q P +AAL G I ++ G H +A+ KG +Y WG
Sbjct: 334 GIGNNGN--------------QLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWGA 379
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGK 311
YG+LG + + P + + E V+ + +S+ T+ GQ++MWG+
Sbjct: 380 NTYGQLGTGTKSNHLSPVHI-------MADKERVVEVAACHSTHTSAAKTQSGQVFMWGQ 432
Query: 312 LK 313
+
Sbjct: 433 CR 434
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G + + +T FG N LG+G + + P + L +V + + G+ V
Sbjct: 148 GTTANEAIYITHGNEVFVFGLNCSSCLGTGDGLSTVMPKKLDFLRGKKVASLSYGSGPHV 207
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
L++ +G + G Y QLG+G+ N P I A L + + +
Sbjct: 208 LLATDDG-QLFAWGHNGYSQLGNGSTNP--------------GLSPVLITANLQNKKVKE 252
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEAVISA 292
V+CG++H++A+ G V+ WG+ G++G ++ PR+V Q N + I+
Sbjct: 253 VSCGSHHSMALTLDGEVFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNA----SGITC 308
Query: 293 GSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G +S G++Y WG + NNG+ + P + L G ++ + SG H
Sbjct: 309 GQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQ-LTPCRVAALQGMCIQQIVSGYGHCLA 367
Query: 346 GADSSCI-SWGHAQYGELGYG 365
D + +WG YG+LG G
Sbjct: 368 LTDKGLLYAWGANTYGQLGTG 388
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC +A++ EG Y++G+N+ GQLG G + P ++ L+ +I K G H
Sbjct: 515 VSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHV 574
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP--SPVRCLVSEVTATACGADFTVWLSSVE 180
VT +G+ +G N+ GQLG+ + P +P E+ CG TV LS
Sbjct: 575 GAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTG 634
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTN 239
+ G Q GQLG + Y P I ++ T I KV CG
Sbjct: 635 VVYVFGNG--QSGQLGVAVNQTS---------PYITNP---CILSMPNNTKIAKVDCGIE 680
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
HT AV G +YTWG G GRLGH + +D +VP V+
Sbjct: 681 HTAAVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLVE 717
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 158/372 (42%), Gaps = 28/372 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L+G DIR VA G + H +AV V G ++WG G+LG + + R P +
Sbjct: 395 LFPRVVEALLGRDIRTVACG--TEHTLAVSVNGEMFSWGCGRGGKLGLKNILDRYMPLKI 452
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEV 163
I H+ VTE G FG + + R + P V +++
Sbjct: 453 GAFENVNITFVSCNELHSASVTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKI 512
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A +CG +FT+ L+S EG + + G GQLG G N+ P I
Sbjct: 513 KAVSCGLEFTIALNS-EG-ELYSFGKNDCGQLGAGHFNDIE--------------EPYLI 556
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L G I KV+CG+ H AV G V+ WG +G+LG + + +P N
Sbjct: 557 KHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEE 616
Query: 284 LPPEAVISAGSVNSSCT-----AGGGQLYMWGKLKNNGDDWMYPKPLMDL-SGWNLRCMD 337
+ + +V SCT G GQ G N ++ ++ + + + +D
Sbjct: 617 IQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVD 676
Query: 338 SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G H +S C+ +WG+ G LG+G + + +P V+ L V S+ACG H+
Sbjct: 677 CGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDR--YVPTLVESLAYKQVQSIACGAYHT 734
Query: 397 LVIVDRTNVGER 408
V R V ++
Sbjct: 735 AACVIRAWVHDQ 746
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ I G G LGHG + E + PR + AL G I VACGT
Sbjct: 371 DACDIYTWGASPKGVLGHGEETE--------------ELFPRVVEALLGRDIRTVACGTE 416
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
HT+AV G +++WG G G+LG + D ++P ++ F+ N+ +S ++S+
Sbjct: 417 HTLAVSVNGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNI----TFVSCNELHSAS 472
Query: 300 TAGGGQLYMWGK----LKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVGADS--SCI 352
G+LY +G+ L +D P +D S N S + + +S
Sbjct: 473 VTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELY 532
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
S+G G+LG G + P + L G+ + V+CG H
Sbjct: 533 SFGKNDCGQLGAGHFNDIEE--PYLIKHLNGVRISKVSCGSKH 573
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 98/362 (27%), Positives = 157/362 (43%), Gaps = 59/362 (16%)
Query: 74 DVEGRCYTWGRNERGQLGH---------GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
D G ++WG+N GQ+G+ KI+ + P ++ L + G H+V
Sbjct: 1497 DAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVA 1556
Query: 125 VTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
+T G LA+G N H QLG G S + P+P+ L + + + +CG++ T+ L +
Sbjct: 1557 ITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPAL-TNIQSVSCGSEHTLALDYI--G 1613
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ + G + G LGHG + + P P+ I AL G + + CG H++
Sbjct: 1614 QVFSWGNGEGGLLGHGNE--------------DVCPSPKIIEALKGLNVDFIVCGGLHSL 1659
Query: 243 AVDSKGYVYTWGFGGYGRLG------HREQKDEWVPRRVDVFQRNNVLPPEAV----ISA 292
+ VY+WG G+LG E+ P+RV + N+ E V I+A
Sbjct: 1660 VLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRV----KGNL---EGVGVIQIAA 1712
Query: 293 GSVNSSCTAGGGQLYMWGKLKN-------NGDDW-MYPKPLMDLSGWNLRCMDSG-NMHH 343
G +S A GQ+Y WG N D + +Y L+ + G N +
Sbjct: 1713 GEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSN 1772
Query: 344 FVGADSSCISWGHAQYGELG-YGPYGQKSSA----MPKKVDILEGMHVISVACGYGHSLV 398
+G + I L Y P QK + +PKK+D + V+ V+CG+ HSL
Sbjct: 1773 QLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLA 1832
Query: 399 IV 400
+V
Sbjct: 1833 LV 1834
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 98/379 (25%), Positives = 156/379 (41%), Gaps = 37/379 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + PL D + C H VA+ G WG N QLG G+K P
Sbjct: 1533 PKLIVPLK--DTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPI 1590
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS-EV 163
+ I+ G HT+ + G ++G + G LG G+ ++ PSP + L V
Sbjct: 1591 PALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGN--EDVCPSPKIIEALKGLNV 1648
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG ++ L+ + + + G + GQL G D + T + Y P+ R
Sbjct: 1649 DFIVCGGLHSLVLT--KNRQVYSWGRNEGGQL--GIDKKLFTNEK----CYLTTPK-RVK 1699
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L G ++++A G H++A+ G VY WG+ G++G Q D + + + N
Sbjct: 1700 GNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNK 1759
Query: 284 LPPEAVISAGSVNS-------------SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG 330
+ E + G +S S T Y K D PK +
Sbjct: 1760 I--EKIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQ 1817
Query: 331 WNLRCMDSGNMHH--FVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
+ + G+ H V AD+ +WG ++G+LG G GQ SS +P+ + L+ +
Sbjct: 1818 IPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSS-VPRPITYLQDVT 1876
Query: 386 VISVACGYGHSLVIVDRTN 404
S+ACG HSLV+ + N
Sbjct: 1877 TYSMACGSYHSLVVANDVN 1895
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 110/275 (40%), Gaps = 50/275 (18%)
Query: 119 RSHTVVVTEDGNSLAFGW--NKHGQLG----------SGSIRNEIEPSPVRCLVSEVTAT 166
+ ++ +D + F W N GQ+G S I+ V + VT+
Sbjct: 1488 KDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSV 1547
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG +V ++ ++L G + QLG G + SSV P P I AL
Sbjct: 1548 ACGYQHSVAITY--AGTVLAWGDNSHSQLGLGEKSP-----SSV-------PFPTPIPAL 1593
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
I V+CG+ HT+A+D G V++WG G G LGH + P+ ++ + NV
Sbjct: 1594 T--NIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNV--- 1648
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM---------------DLSGW 331
I G ++S Q+Y WG +N G K L +L G
Sbjct: 1649 -DFIVCGGLHSLVLTKNRQVYSWG--RNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGV 1705
Query: 332 NLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYG 365
+ + +G H A + WG+ G++G G
Sbjct: 1706 GVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLG 1740
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 64/217 (29%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQ+G+ D + N +K+ + P+ I L + VACG H+VA+ G V
Sbjct: 1511 GQMGNVYDPKQNLLSKKIKVNF-----PKLIVPLKDTIVTSVACGYQHSVAITYAGTVLA 1565
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
WG + +LG E+ VP
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVP---------------------------------------- 1585
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMH----HFVGADSSCISWGHAQYGELGYGPYG 368
+P P+ L+ N++ + G+ H ++G SWG+ + G LG+G
Sbjct: 1586 --------FPTPIPALT--NIQSVSCGSEHTLALDYIG---QVFSWGNGEGGLLGHG--N 1630
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ PK ++ L+G++V + CG HSLV+ V
Sbjct: 1631 EDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 54/252 (21%)
Query: 15 GKEKGGEL-----LFCGSTCWDAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSC 68
G+ +GG+L LF C+ L +P R++ L GV + +AAG
Sbjct: 1671 GRNEGGQLGIDKKLFTNEKCY-------------LTTPKRVKGNLEGVGVIQIAAG--EA 1715
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-----RPTIVSELSKY-KIKKAGAGRSHT 122
H +A+ + G+ Y WG N GQ+G G +Q D P ++ +L+K KI G S+
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLG--MQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQ 1773
Query: 123 -------VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
+ +T N++ + Q ++ + P + C V +CG + ++
Sbjct: 1774 LGLEKEPIKITSTTNNILDQYKPQDQ--KRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSL 1831
Query: 175 WL--SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L + + + G+ ++GQLG G + +SSV PR I L T
Sbjct: 1832 ALVVADTKHYMLFAWGMHKHGQLGIGETGQ----NSSV---------PRPITYLQDVTTY 1878
Query: 233 KVACGTNHTVAV 244
+ACG+ H++ V
Sbjct: 1879 SMACGSYHSLVV 1890
>gi|366163660|ref|ZP_09463415.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
Length = 2438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 150/333 (45%), Gaps = 37/333 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+A+ +G WG N+ GQLG G+ ++ + + +L +Y IK+ AG H V + D
Sbjct: 621 FTLALANDGSVKVWGNNDYGQLGLGNTLEYKKIATIPDL-RY-IKQLDAGTDHAVALLND 678
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N +GQLG G + P+ V L S V A G DFT+ L +E ++ G
Sbjct: 679 GTVKVWGKNDYGQLGLGDLDKRTSPTKVEGL-SGVKQIAAGQDFTLVL--MEDGTVKGWG 735
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQL K S VK+ P + L+ + ++A G N A+ + G
Sbjct: 736 SNDYGQL---------CKPSDVKIV----KTPIDLPQLSD--VKEIAVGGNCAFAILNNG 780
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V WG YG+LG ++ + P +V L IS N+ G + +
Sbjct: 781 TVKAWGDNDYGQLGLGDKLERSTPTQV------TGLSSVKKISVCWSNAIALLNDGTVKV 834
Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPY 367
WG + N + P + +L N++ + G ++FV D S WG G LG G
Sbjct: 835 WGHINN----YTLPTSVGELK--NVKQVGVGVYNYFVLLQDGSVKGWGSNTLGSLGVGDT 888
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
Q++ +P K+D +EG + G HS V++
Sbjct: 889 EQRT--LPTKIDGIEGAK--QLINGNAHSFVLM 917
>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
Length = 1080
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 31/274 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ ++AG H VA+ G YTWG G+LGH D I + +++
Sbjct: 178 PCKVDSLGGSFIKLISAG--KFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++ A + HTV+ T+ G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVTSGLGSRRVMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S + A A T +S + + G + GQLG+GT N +
Sbjct: 296 RSRIVAVAAANKHTAVVSDL--GEVFTWGCNREGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
P + +L G+T+ +V+ HT+ + S G V+TWG + +K P +
Sbjct: 342 PHVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKKSGSTPLKF 401
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+R NV+ I+AG V+S G L+ W
Sbjct: 402 HRKERLNVVS----IAAGMVHSMALTDDGALFYW 431
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 126/337 (37%), Gaps = 74/337 (21%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L IK AG+ H+V +T G +
Sbjct: 152 VATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV S +G +
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVI--STQGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG+ + + QP PR +++L IV VA HT V
Sbjct: 270 WGSNREGQLGYPS--------------VDTQPTPRRVSSLRSR-IVAVAAANKHTAVVSD 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G+LG+ + P V+ + + +SA ++ G
Sbjct: 315 LGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTL----TRVSAAKYHTIVLGSDG 370
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
+++ WG + PK R + S N+
Sbjct: 371 EVFTWGH------RLVTPK----------RVVVSRNL----------------------- 391
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+KS + P K E ++V+S+A G HS+ + D
Sbjct: 392 ----KKSGSTPLKFHRKERLNVVSIAAGMVHSMALTD 424
>gi|90657596|gb|ABD96895.1| hypothetical protein [Cleome spinosa]
Length = 477
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 158/389 (40%), Gaps = 64/389 (16%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G + R++ C H AV +G +TWG NE GQLG G ++ R RP V L +K
Sbjct: 58 GANSRWLDIACGREHTSAVASDGSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSEFVKS 117
Query: 115 AGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
G T + E DG S++ W GS R P + +V+ CG
Sbjct: 118 VSCGAFCTAAIAEPRENDGTLSMSRLWVWGQNQGSNLPRLFSGAFPAETAIRQVS---CG 174
Query: 170 ADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
V LS EG +L A G ++GQLG G + E PR IAA A
Sbjct: 175 TAHVVALSE-EG--LLQAWGYNEHGQLGRGVTS-------------EGLQAPRLIAAYAK 218
Query: 229 ET--------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK---DEWVPRRVDV 277
I +++CG HT AV KG VYTWG G G+LGH + E +PRRV
Sbjct: 219 FLDEAPELVKIAQISCGEYHTAAVSEKGEVYTWGLGSMGQLGHISLQVGDKELIPRRVAG 278
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----------------GDDWMY 321
V +S G V++ + G LY WG + G + +
Sbjct: 279 LDSLCV----KEVSCGGVHTCALSSDGALYAWGGGQAGQLGLGPQSGFFSCILGGTEMLL 334
Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSA--MPKKV 378
+ +++ + G+ H V D WG+ YG+ KSS P V
Sbjct: 335 RNVPALVIPIDVQLVACGHSHTLVYMKDGRIRGWGYNSYGQAA----NDKSSYAWFPSPV 390
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNVGE 407
D G V +A G GHS V+ D ++ E
Sbjct: 391 DWCVG-QVRKLAAGGGHSAVLTDAFSLKE 418
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 154/362 (42%), Gaps = 47/362 (12%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSEL------SKYKIKKAGAGRSHT 122
V + + Y WG N+ GQ G +K+ R + +L + + GR HT
Sbjct: 14 VTLPTKSAIYVWGYNQSGQTGRNGKEKLLRIPKQLPPDLFGCPSGANSRWLDIACGREHT 73
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
V DG+ +G N++GQLG G+ P V+ L SE V + +CGA T ++
Sbjct: 74 SAVASDGSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSEFVKSVSCGAFCTAAIAEPRE 133
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
N G +L N+ + PR + A A I +V+CGT H
Sbjct: 134 ----NDGTLSMSRLWVWGQNQGSNL-----------PRLFSGAFPAETAIRQVSCGTAHV 178
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAV----ISAGSVN 296
VA+ +G + WG+ +G+LG + PR + + + PE V IS G +
Sbjct: 179 VALSEEGLLQAWGYNEHGQLGRGVTSEGLQAPRLIAAYAKFLDEAPELVKIAQISCGEYH 238
Query: 297 SSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
++ + G++Y WG GD + P+ + L ++ + G +H +
Sbjct: 239 TAAVSEKGEVYTWGLGSMGQLGHISLQVGDKELIPRRVAGLDSLCVKEVSCGGVHTCALS 298
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE--------GMHVISVACGYGHSLV 398
+D + +WG Q G+LG GP S + ++L + V VACG+ H+LV
Sbjct: 299 SDGALYAWGGGQAGQLGLGPQSGFFSCILGGTEMLLRNVPALVIPIDVQLVACGHSHTLV 358
Query: 399 IV 400
+
Sbjct: 359 YM 360
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 37/245 (15%)
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
++I G Q GQ G N K+ +++ + P + A + +ACG HT
Sbjct: 20 SAIYVWGYNQSGQTGR------NGKEKLLRIPKQLPPDLFGCPSGANSRWLDIACGREHT 73
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
AV S G ++TWG YG+LG + P++V Q + + S + CTA
Sbjct: 74 SAVASDGSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSE-------FVKSVSCGAFCTA 126
Query: 302 GGGQ------------LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
+ L++WG+ + + ++ + +R + G H ++
Sbjct: 127 AIAEPRENDGTLSMSRLWVWGQNQGSNLPRLFSGAFPAETA--IRQVSCGTAHVVALSEE 184
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKV--------DILEGMHVISVACGYGHSLVIV 400
+ +WG+ ++G+LG G + A P+ + + E + + ++CG H+ +
Sbjct: 185 GLLQAWGYNEHGQLGRGVTSEGLQA-PRLIAAYAKFLDEAPELVKIAQISCGEYHTAAVS 243
Query: 401 DRTNV 405
++ V
Sbjct: 244 EKGEV 248
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ-------------LGHG 93
P R+ L + ++ V+ G V H A+ +G Y WG + GQ LG
Sbjct: 273 PRRVAGLDSLCVKEVSCGGV--HTCALSSDGALYAWGGGQAGQLGLGPQSGFFSCILGGT 330
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
+ + R+ P +V + ++ G SHT+V +DG +G+N +GQ + P
Sbjct: 331 EMLLRNVPALVIPID---VQLVACGHSHTLVYMKDGRIRGWGYNSYGQAANDKSSYAWFP 387
Query: 154 SPVRCLVSEVTATACG 169
SPV V +V A G
Sbjct: 388 SPVDWCVGQVRKLAAG 403
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKKA 115
+ V+AG + H VA+ +WGR E GQLGHGD R PT++S + + I
Sbjct: 24 VVLVSAG--ASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81
Query: 116 GAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G HT +ED + ++GW G+LG G+ + P PV+ L ++ ACG
Sbjct: 82 ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ + + G Q GQLG GT T+DS + P+ I + G +
Sbjct: 142 --LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQSFEGVCVKM 185
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+A G HT AV G +Y WG+G YG LG ++ D VP +V + N L ++ + G
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVE-NMFLKIPSLYATG 244
Query: 294 SVNSSCT 300
S T
Sbjct: 245 LYCQSVT 251
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR ++ +P ++ L G+ I+ +A C HC+AV + G +WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 160
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG G P + +K AG HT VTEDG+ +GW ++G LG G +
Sbjct: 161 LGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220
Query: 150 EIEPSPV 156
+ P V
Sbjct: 221 RLVPEKV 227
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFT 173
AG SH+V + ++G + GQLG G + + P+ + + +T+ CGAD T
Sbjct: 29 AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHT 88
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
S E + + G +G+LGHG ++ T P+ + AL G I +
Sbjct: 89 TAYSEDE-QQVYSWGWGDFGRLGHGNSSDVFT--------------PQPVKALQGIKIKQ 133
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ACG +H +AV G V +WG G+LG +D +P+++ F+ V +I+AG
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCV----KMIAAG 189
Query: 294 SVNSSCTAGGGQLYMWG 310
+ +++ G LY WG
Sbjct: 190 AEHTAAVTEDGDLYGWG 206
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 38/245 (15%)
Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
+P P LVS GA +V L + G + + G + GQLGHG D+ +
Sbjct: 19 DPPPAVVLVS------AGASHSVAL--LAGNVLCSWGRGEDGQLGHG--------DAEDR 62
Query: 212 LAYEAQPRPRAIAAL--AGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKD 268
L P ++ A I V CG +HT A + + VY+WG+G +GRLGH D
Sbjct: 63 LV------PTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSD 116
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYP 322
+ P+ V Q + I+ G + G++ WG+ +N +D + P
Sbjct: 117 VFTPQPVKALQGIKI----KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLP 172
Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ + G ++ + +G H V D WG +YG LG G + +P+KV +
Sbjct: 173 QKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD--RNDRLVPEKVSSV 230
Query: 382 EGMHV 386
E M +
Sbjct: 231 ENMFL 235
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVA------VDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
RL P V A G S C A + E + Y+WG + G+LGHG+ P
Sbjct: 62 RLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQ 121
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L KIK+ G SH + VT G ++G N++GQLG G+ + + P ++
Sbjct: 122 PVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE--YNTKDSSVKLAYEAQPR 219
V A GA+ T + E + G +YG LG G N+ K SSV+ + P
Sbjct: 182 CVKMIAAGAEHTA--AVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVENMFLKIPS 239
Query: 220 PRA 222
A
Sbjct: 240 LYA 242
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP--EA 288
+V V+ G +H+VA+ + + +WG G G+LGH + +D VP + F + P +
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGF---DAAAPGITS 80
Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
VI ++ + Q+Y W G+L + N D P+P+ L G ++ + G+ H
Sbjct: 81 VICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSH 140
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
V SWG Q G+LG G + S +P+K+ EG+ V +A G H+ + +
Sbjct: 141 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE 198
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +++ GV ++ +AAG + H AV +G Y WG G LG GD+ R P VS
Sbjct: 172 PQKIQSFEGVCVKMIAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSS 229
Query: 107 LSKYKIK 113
+ +K
Sbjct: 230 VENMFLK 236
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 131/312 (41%), Gaps = 34/312 (10%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P L G I ++AG H + + +G Y+WG N QLG+G P+++
Sbjct: 87 LEPRLLESFSGQKIISLSAGS-GPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLL 145
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SE 162
S K+ + G H++ +T +G +G+N GQ+GSGS N+ P V +
Sbjct: 146 SRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKR 205
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ CG T L + + + G GQLG G N N Q P
Sbjct: 206 IIDITCGQ--TTSLCVTDSGEVYSWGYNGNGQLGVG--NNVN------------QTNPCR 249
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+AAL G I +V CG H +A+ G V+ WG YG+LG + + P +V +
Sbjct: 250 VAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTPLQVAT-RIGR 308
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
V+ A + S +S+ G +YMWG+L+ P DL+
Sbjct: 309 VVCLAA--THYSHSSAARNQSGHIYMWGQLRQQATPEPKPTNFTDLNAV----------- 355
Query: 343 HFVGADSSCISW 354
F G S +SW
Sbjct: 356 -FAGFSSPPVSW 366
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 21/242 (8%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG 129
+ ++ + Y+ G N G LG GD P ++ S KI AG H +V+T+DG
Sbjct: 59 IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDG 118
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
++G N + QLG+G PS + R + ++V ACG+ ++ L++ EG + G
Sbjct: 119 GVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTT-EG-EVYTWG 176
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQ+G G+ A + PR + A + + I+ + CG ++ V G
Sbjct: 177 YNNCGQIGSGST------------ANQGSPR-KVTACIGNKRIIDITCGQTTSLCVTDSG 223
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY+WG+ G G+LG ++ P RV Q + A + G ++ G ++
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVI----AQVVCGYAHALALTDNGVVFG 279
Query: 309 WG 310
WG
Sbjct: 280 WG 281
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 28/293 (9%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
+ G + + T D + G N G LG G + +EP + + + + + G+
Sbjct: 48 VFTFGQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGS 107
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
V + + +G + + G Y QLG+G P ++
Sbjct: 108 GPHVLVLTQDGG-VYSWGHNSYMQLGNG--------------GTSPGTSPSLLSRNISNK 152
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+V++ACG++H++A+ ++G VYTWG+ G++G ++ PR+V N + I
Sbjct: 153 VVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIID---I 209
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
+ G S C G++Y WG N N + P + L G + + G H
Sbjct: 210 TCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHAL 269
Query: 345 VGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
D+ + WG YG+LG G + ++ P +V G V A Y HS
Sbjct: 270 ALTDNGVVFGWGANSYGQLGSG--NKANTCTPLQVATRIGRVVCLAATHYSHS 320
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 49/366 (13%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D++ +A G H + +G Y+WG G +G+ I+ RP +V ++ +K
Sbjct: 261 LDVQSIACG--ETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAV 318
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH-GQLGSGSIRNEIEP----SPVRCLVSEVTATACGA 170
G H VT G +G H GQL + N P SP+ + V ACG
Sbjct: 319 AYGSKHACAVTVSGELFEWGEGPHMGQLDCYA-NNLWFPHKLFSPLDGI--SVVKIACGP 375
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T ++S + G +G LGHG D + T RP+ + L G
Sbjct: 376 WHTAIITS--SGQLYTYGDGTFGVLGHG-DTQGTT-------------RPKEVEYLKGSR 419
Query: 231 IVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ VACG HT A+ + ++TWG G+LGH ++K + +P VD
Sbjct: 420 VKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTD 479
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMDLSGWNL-R 334
+ + +S G + + G ++ M G+L N D + L R
Sbjct: 480 YDFIQ----VSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVR 535
Query: 335 CMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ SG+ H + + +WG + G+LG G Y +S+ P VD LEG V S++CGY
Sbjct: 536 HISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRST--PTLVDALEGRQVESISCGY 593
Query: 394 GHSLVI 399
++ +
Sbjct: 594 NYTAAV 599
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 58/321 (18%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG + G + D + P +V + ++ G +H ++T+ G ++G
Sbjct: 232 FFWG-DAFGSILDYDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESS 290
Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G +G+ P V + S V A A G+ ++ V G P GQL
Sbjct: 291 GGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVT-VSGELFEWGEGPHMGQLDCY 349
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+N + + + L G ++VK+ACG HT + S G +YT+G G +
Sbjct: 350 ANNLWFPH--------------KLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTF 395
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
G LGH + + P+ V+ + + V C A G
Sbjct: 396 GVLGHGDTQGTTRPKEVEYLKGSRV--------------KCVACG--------------P 427
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
W + LS + S +WG A G+LG+ +K +P V
Sbjct: 428 WHTAAIVEVLSDFKSN-----------SPRSKLFTWGDADRGKLGHA--DKKMKLIPTCV 474
Query: 379 DILEGMHVISVACGYGHSLVI 399
D L I V+CG ++V+
Sbjct: 475 DSLTDYDFIQVSCGMALTVVL 495
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ACG H + +G VY+WG G +G++ P+ V+ +V ++ G
Sbjct: 266 IACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHV----KAVAYG 321
Query: 294 SVNSSCTAGGGQLYMWG------KLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHH-FV 345
S ++ G+L+ WG +L ++ +P L L G ++ + G H +
Sbjct: 322 SKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAII 381
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ ++G +G LG+G + + PK+V+ L+G V VACG H+ IV+
Sbjct: 382 TSSGQLYTYGDGTFGVLGHG--DTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVE 435
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 158/391 (40%), Gaps = 57/391 (14%)
Query: 38 GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G++ G+ P L LVG +D++ +A G H + +G YTWG G+L
Sbjct: 240 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 297
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
+ P +V L+ +K G HT +T G +G H G + RN+
Sbjct: 298 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 357
Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P + ++ + ACG T ++S + G +G LGHG
Sbjct: 358 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 406
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
+ RP+ + +L G + VACG HT A+ G ++TWG G
Sbjct: 407 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 461
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+LGH ++K + +P VD +++ +S G+ + G ++ G ++
Sbjct: 462 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHG---- 513
Query: 320 MYPKPLMD----------LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
P D L +R + SG+ H V S +WG G+LG G Y
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+SS P V+ LEG V SV CG+ + I
Sbjct: 574 NRSS--PTLVEALEGRDVESVVCGFNFTAAI 602
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG NH + +G VYTWG GRL + + P+ V+
Sbjct: 253 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 312
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN--GDDWMYPK----PLMD 327
+V ++ GS ++ G+L+ WG+ L N+ G + +P P+ +
Sbjct: 313 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 368
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+S + C G H + + ++G +G LG+G + A PK+V+ L+G V
Sbjct: 369 ISVSKIAC---GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 423
Query: 387 ISVACGYGHSLVIVD 401
SVACG H+ IV+
Sbjct: 424 KSVACGPWHTAAIVE 438
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P IV LS + + AG
Sbjct: 150 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 209
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G N+ PS + L + V ACG T L+
Sbjct: 210 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT- 268
Query: 179 VEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G +YGQLGH T NE RPR + L G + ++ACG
Sbjct: 269 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 312
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
HT+A V G V+++G G G+LG+ +++ +PR
Sbjct: 313 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + + +P + L GV + ++AG H +A+ + G
Sbjct: 164 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 219
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G ++ P+ + L K++ G HT ++T+ G FG
Sbjct: 220 NVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDG 279
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V LV + VT ACG T+ S G + + G + GQLG
Sbjct: 280 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 338
Query: 197 HG 198
+G
Sbjct: 339 NG 340
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N GQLG G I + +S V
Sbjct: 144 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 203
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A ++ ++ + G GQLG G + YN + P I AL
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYNKES------------PSCIEAL 249
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ + +ACG HT + G V+T+G G YG+LGH ++E PR V
Sbjct: 250 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 298
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R L + I+++ CG H++A+ G ++ WG G+LG R P V+
Sbjct: 139 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 195
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMY----PKPLMDLSGWNL 333
N P ISAG +S + G +Y WG+ G Y P + L +
Sbjct: 196 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKV 254
Query: 334 RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + S + ++G +YG+LG+ ++ P+ V L G V +ACG
Sbjct: 255 EFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQIACG 312
Query: 393 YGHSLVIVDRT 403
H+L V T
Sbjct: 313 RQHTLAYVSDT 323
>gi|417401058|gb|JAA47434.1| Putative alpha-tubulin suppressor [Desmodus rotundus]
Length = 445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 53/353 (15%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG G K P +++ K I++ G H+ VVT+ G+ G NK
Sbjct: 18 FAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCIRRITGGGGHSAVVTDGGSLFVCGLNK 77
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
G+LG G + + +P R L+ V ACG DFTV L+ E +L+ G +GQLG
Sbjct: 78 DGRLGLGHTEDVLCFTPCRSLLGCPVQQVACGWDFTVILT--ESGQVLSCGSNSFGQLG- 134
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ + S V P+AI L E +V +A G H +A + G V+ WG G
Sbjct: 135 ---VPHGPRRSVV---------PQAIELLR-EKVVGIAAGLRHALAATASGIVFQWGT-G 180
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLK 313
G R + +P + + + V E + AGS +S+ G+LY+WG K
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGELYVWGSNK 240
Query: 314 NN---GDDWMYPKPLMDLSGWNLRCMD--------SGNMHHFVGADS-SCISWGHAQYGE 361
+ P P G C SG H ++ +WG A YG+
Sbjct: 241 HGQLASQAAFLPVP----QGIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQ 296
Query: 362 LGYGPYG-------QKSSAMP---KKVDILEGMHVIS----VACGYGHSLVIV 400
LG P ++ S P + + +H ++ V+CG H+L +V
Sbjct: 297 LGRKPESPEGWNPEKQGSPFPCSRPQKNTPSSLHCLTGATEVSCGSEHNLAVV 349
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 150/404 (37%), Gaps = 50/404 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V G + G N+ G+LG G T L +++ G TV++TE
Sbjct: 60 HSAVVTDGGSLFVCGLNKDGRLGLGHTEDVLCFTPCRSLLGCPVQQVACGWDFTVILTES 119
Query: 129 GNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G L+ G N GQLG R + P + L +V A G + A+ +
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPRRSVVPQAIELLREKVVGIAAGLRHAL-------AATASG 172
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
+ Q+G G + ++ L A+ P + L + V G+ H+ ++
Sbjct: 173 IVFQWGT-GLASSGRRLCPGQTLPLFLTAK-EPSRVTGLENSRAICVVAGSEHSASLTDA 230
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVD--VFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G +Y WG +G+L + VP+ ++ FQ V + +G + G+
Sbjct: 231 GELYVWGSNKHGQLASQAAFLP-VPQGIEAHCFQNEKV----TAVWSGWTHLVAQTETGK 285
Query: 306 LYMWGKL-----------------KNNGDDWMYPKPLMDLSGWNLRCM------DSGNMH 342
++ WG+ + G + +P + +L C+ G+ H
Sbjct: 286 VFTWGRADYGQLGRKPESPEGWNPEKQGSPFPCSRPQKNTPS-SLHCLTGATEVSCGSEH 344
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ +C SWG ++G G G + + PK V L V+ V CG GHSL
Sbjct: 345 NLAVVGGACCSWGWNEHGMCGDG--SEANIWAPKLVQALRSSSVLLVGCGAGHSLAFCQL 402
Query: 403 TNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNS 446
+ D ++ E +R +P + + + N S
Sbjct: 403 PALPPPAASAD-------TKSQEATERQPVLPTQSQSYRCRNGS 439
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 27/280 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++L CGS + +G G V P + L+ + +AAG H +A G
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPRRS--VVPQAIE-LLREKVVGIAAGLR--HALAATASGIV 174
Query: 80 YTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ WG +L G + P+ V+ L + AG H+ +T+ G
Sbjct: 175 FQWGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGELY 234
Query: 133 AFGWNKHGQLGSGSIRNEIEPSP----VRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+G NKHGQL S + P P C +E TA + +T ++ E + G
Sbjct: 235 VWGSNKHGQLAS---QAAFLPVPQGIEAHCFQNE-KVTAVWSGWTHLVAQTETGKVFTWG 290
Query: 189 LPQYGQLGHGTDNE--YNTKD--SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
YGQLG ++ +N + S + + P ++ L G T +V+CG+ H +AV
Sbjct: 291 RADYGQLGRKPESPEGWNPEKQGSPFPCSRPQKNTPSSLHCLTGAT--EVSCGSEHNLAV 348
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
G +WG+ +G G + + W P+ V + ++VL
Sbjct: 349 VG-GACCSWGWNEHGMCGDGSEANIWAPKLVQALRSSSVL 387
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCT 300
A + ++ WG YG+LG ++D P+ Q N+ P + I+ G +S+
Sbjct: 10 ATPAPTALFAWGANSYGQLGLGHKEDVLSPQ-----QLNDFCKPMCIRRITGGGGHSAVV 64
Query: 301 AGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCIS 353
GG L++ G K+ + +D + P L G ++ + G + +S +S
Sbjct: 65 TDGGSLFVCGLNKDGRLGLGHTEDVLCFTPCRSLLGCPVQQVACGWDFTVILTESGQVLS 124
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G +G+LG P+G + S +P+ +++L V+ +A G H+L
Sbjct: 125 CGSNSFGQLGV-PHGPRRSVVPQAIELLR-EKVVGIAAGLRHAL 166
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 29/298 (9%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ GS C +G A+ G + P ++ L +I A G H +A G Y
Sbjct: 43 EVYSLGSNCSGCLGLGSDAMSG--LEPRKVEQLCKKNIVSFAYG-SGPHVLATTNAGEVY 99
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+WG N QLG+G Q PT + S L +I G H++ ++ +G A+G N
Sbjct: 100 SWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNC 159
Query: 140 GQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSG+ N+ P V + + + ACG T +++ + + G GQLG
Sbjct: 160 GQVGSGTTSNQPTPRKVTACIGSKKCISIACGQ--TSSIAAFDTGEVFGWGYNGNGQLGL 217
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G N N QP P + L I ++ACG HT+ + +G +Y WG
Sbjct: 218 G--NNIN------------QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANS 263
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLK 313
YG+LG + + P R+ V L I+A N S+ G+++MWG+ +
Sbjct: 264 YGQLGTGNKANMISPVRIAV-----DLGRFVEIAATHYNHLSAALTQAGKVFMWGQCR 316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 28/289 (9%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE-VTATACGADFT 173
G+ + +V+T D + G N G LG GS + +EP V L + + + A G+
Sbjct: 29 GSAGNEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSFAYGSGPH 88
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
V L++ + + G Y QLG+G+ N+ T P P ++L G+ I
Sbjct: 89 V-LATTNAGEVYSWGHNGYCQLGNGSTNQGPT------------PTP-VTSSLLGKRITA 134
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ACG++H++A+ S+G ++ WG G++G ++ PR+V + I+ G
Sbjct: 135 IACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKC---ISIACG 191
Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
+S G+++ WG N G++ P P L+ L+ + + G H
Sbjct: 192 QTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLT 251
Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
D S +WG YG+LG G S + VD+ G V A Y H
Sbjct: 252 DEGSLYAWGANSYGQLGTGNKANMISPVRIAVDL--GRFVEIAATHYNH 298
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 49/385 (12%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
+L + + P L V +D++ +A C H V +G +TWG G+LGHG
Sbjct: 291 SLKMDSLLPKALESAVVLDVQNIA--CGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV 348
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSP 155
+P +V L I+ G HT VT G+ +G +N G LG G+ + P
Sbjct: 349 LQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWIPKK 407
Query: 156 VRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ + V++ ACG T ++S + G +G LGHG SV +
Sbjct: 408 INGPLEGIHVSSIACGPWHTAVVTS--AGQLFTFGDGTFGVLGHG-------DRGSVTM- 457
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
PR + +L G V+ ACG HT AV S G ++TWG G GRL
Sbjct: 458 ------PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRL 511
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNG 316
GH +++ + VP V V P +S G + G +Y ++G+L N
Sbjct: 512 GHGDKETKLVPTCVAAL----VDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPH 567
Query: 317 DDWMYPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
D P + LS + + G H + + + +WG G LG+G ++S
Sbjct: 568 ADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS-- 625
Query: 375 PKKVDILEGMHVISVACGYGHSLVI 399
P V+ L+ V S+ACG + I
Sbjct: 626 PTLVEALKDKQVKSIACGTNFTAAI 650
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G ++TWG GRLGH D P+ VD
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ ++S G ++ G LY WG L +G++ W+ K L G
Sbjct: 359 NTNI----ELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEG 414
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G G S MP++V+ L+G+ +
Sbjct: 415 IHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRG--SVTMPREVESLKGLRTVRA 472
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 473 ACGVWHTAAVVE 484
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 102/234 (43%), Gaps = 20/234 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV G WG N GQLG G I P +VS S G H++ VT
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSA 263
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNA 187
G LA+G N GQLG G+ + P V + VTA A G F++ LSS ++L
Sbjct: 264 GAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSS--AGAVLAW 321
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GQLG GT + +T P +++ AG T+ +A G H +AV S
Sbjct: 322 GSNSSGQLGDGTTADRST--------------PVTVSSPAGTTVTAIAGGDAHGLAVTSV 367
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
G WG +G+LG D P V + L I+AG+ +S A
Sbjct: 368 GAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTL---TAIAAGAAHSVAVA 418
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 149/354 (42%), Gaps = 33/354 (9%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV + VAAG H +AV G WG N GQLG G R P V + +
Sbjct: 88 GVTVTTVAAGA--AHNLAVTSAGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTA 145
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFT 173
AG +H++ +T G LA+G N GQLG G+ + P+PV L VTATA A
Sbjct: 146 VAAGAAHSLALTSAGTVLAWGANTIGQLGDGTTID--SPAPVDVNLPPGVTATAVAAGAA 203
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ ++L G GQLG GT T P ++ +G T
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRT--------------PVVVSLPSGVTATA 249
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VA G H++AV S G V WG G+LG D P V + V ++AG
Sbjct: 250 VAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTV----TAVAAG 305
Query: 294 SVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
S + G + WG + GD D P + +G + + G+ H V
Sbjct: 306 IAFSLALSSAGAVLAWGSNSSGQLGDGTTADRSTPVTVSSPAGTTVTAIAGGDAHGLAVT 365
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS-VACGYGHSLVI 399
+ + I+WG+ +G+LG G + P V + G ++ +A G HS+ +
Sbjct: 366 SVGAAIAWGNNSFGQLGDGTNTDR--VTPVAVSLPVGTTTLTAIAAGAAHSVAV 417
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G + VAAG +A+ G WG N GQLG G R P VS + +
Sbjct: 296 GTTVTAVAAGI--AFSLALSSAGAVLAWGSNSSGQLGDGTTADRSTPVTVSSPAGTTVTA 353
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADF 172
G +H + VT G ++A+G N GQLG G+ + + P V V + +TA A GA
Sbjct: 354 IAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAH 413
Query: 173 TVWLSSVEGASI---LNAGLPQYGQ 194
+V +++ +S+ + P+ GQ
Sbjct: 414 SVAVAAPPTSSVTLRVTPSDPEVGQ 438
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 43/367 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAG 118
VA C H + + G Y G N+ GQLG DK P VS L K KI AG
Sbjct: 68 LVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK-KIIHIAAG 126
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIE-PSPVRCLVS-EVTATACGADFTVW 175
H+ +T DG +G N +GQLG G N + PS V CL + A G++ +V
Sbjct: 127 YYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSV- 185
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY--EAQPRPRAIAALAGETIVK 233
++ + L+ G G+LGHG +SS+ + ++ RPR I L G +
Sbjct: 186 -AATDQGEALSWGAGGSGRLGHG-------HESSLLGFFRTSSEYRPRLIRRLEGIKVKN 237
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
VA G H+ +D G V+ +G + G RE K+ P + + LP ++ G
Sbjct: 238 VAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMI------SELPYSKQVACG 291
Query: 294 SVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPK---------PLMDLS-GW-NLRCM 336
++ + G+L+ WG +N G +M +P+ P+ +S GW + +
Sbjct: 292 GYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351
Query: 337 DSGNMHHFV--GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
GN+ + G+ + GH+ G+LG G PK V+ E + + V+CG+
Sbjct: 352 SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGS--DVDHIKPKMVEFEESVRALQVSCGFN 409
Query: 395 HSLVIVD 401
H+ I++
Sbjct: 410 HTGAILE 416
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 141/334 (42%), Gaps = 36/334 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG + G+LG G + RP + S + + G +HT+ +TE G A G N GQ
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQ 97
Query: 142 LGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG +N EP V L ++ A G + +++ + G GQLG G
Sbjct: 98 LGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITA--DGELYMWGKNSNGQLGLG-- 153
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
K A A P + L G +I VA G+ H+VA +G +WG GG GR
Sbjct: 154 ----------KKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGR 203
Query: 261 LGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
LGH + E+ PR + + V ++AG ++S+C G ++++G+
Sbjct: 204 LGHGHESSLLGFFRTSSEYRPRLIRRLEGIKV----KNVAAGLLHSACIDENGSVFIFGE 259
Query: 312 LKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
+ + K P M + + G H V + S +WG + G LG G
Sbjct: 260 RAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGF 319
Query: 367 YGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVI 399
++ P++++ V V+CG+ H+ I
Sbjct: 320 --METIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 26/227 (11%)
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ E+Q RP +A ++V +ACG HT+ + G VY G +G+LG K+ +
Sbjct: 50 SLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKN-YTT 108
Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNN--------GDDWMYPK 323
++V + LP + + I+AG +S+ G+LYMWGK N + P
Sbjct: 109 EPLEV----SALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPS 164
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP-------YGQKSSAMP 375
+ L+G +++ + G+ H D +SWG G LG+G + S P
Sbjct: 165 KVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRP 224
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV---GER-LDQLDVYDGK 418
+ + LEG+ V +VA G HS I + +V GER +D+ + K
Sbjct: 225 RLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAK 271
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P IV LS + + AG
Sbjct: 155 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 214
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G N+ PS + L + V ACG T L+
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT- 273
Query: 179 VEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G +YGQLGH T NE RPR + L G + ++ACG
Sbjct: 274 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 317
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
HT+A V G V+++G G G+LG+ +++ +PR
Sbjct: 318 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + + +P + L GV + ++AG H +A+ + G
Sbjct: 169 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 224
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G ++ P+ + L K++ G HT ++T+ G FG
Sbjct: 225 NVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDG 284
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V LV + VT ACG T+ S G + + G + GQLG
Sbjct: 285 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 343
Query: 197 HG 198
+G
Sbjct: 344 NG 345
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N GQLG G I + +S V
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 208
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A ++ ++ + G GQLG G + YN + P I AL
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYNKES------------PSCIEAL 254
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ + +ACG HT + G V+T+G G YG+LGH ++E PR V
Sbjct: 255 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 303
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R L + I+++ CG H++A+ G ++ WG G+LG R P V+
Sbjct: 144 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 200
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMY----PKPLMDLSGWNL 333
N P ISAG +S + G +Y WG+ G Y P + L +
Sbjct: 201 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKV 259
Query: 334 RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + S + ++G +YG+LG+ ++ P+ V L G V +ACG
Sbjct: 260 EFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQIACG 317
Query: 393 YGHSLVIVDRT 403
H+L V T
Sbjct: 318 RQHTLAYVSDT 328
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 144/339 (42%), Gaps = 44/339 (12%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
YTWGR++ GQ G G P V L + A G ++ VT DG G N
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98
Query: 139 HGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
QLG +EP V L ++ V ACG L+ V+ + G +YGQLG
Sbjct: 99 ARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHM--LAVVDNGHLAAWGSNEYGQLGT 156
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G A AQ PR + + G +VA G H++A+ S G VY++G G
Sbjct: 157 GEVG-----------ASAAQ--PRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGKLK-- 313
+G LGH + + P V L PEA++S AG S+ + G+++ WG+ K
Sbjct: 204 FGALGHGDVNNRAKPTLV------QALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYG 257
Query: 314 --NNGD--DWMYPKPLMDL-SGWNLRCMDSGNMHHFVGAD--SSCISWGHAQYGELGYGP 366
NG+ + P+P+ + + C D HH + +WG G+LG G
Sbjct: 258 QLGNGEFGNAFLPQPVPGIEQAVQVACGD----HHCIALTRWGEVYTWGLHSSGQLGQG- 312
Query: 367 YGQKSSAM------PKKVDILEGMHVISVACGYGHSLVI 399
S A+ P +VD L + V+ G HS +
Sbjct: 313 SNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFV 351
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 166/380 (43%), Gaps = 42/380 (11%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D N +P ++ L G D+ A G + V D G YT G N+ QLG +
Sbjct: 55 DQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRD--GELYTTGSNDARQLGVKGREVALE 112
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPV-RC 158
P VS L + G+ H + V ++G+ A+G N++GQLG+G + + +P + R
Sbjct: 113 PIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRI 172
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ A GA ++ L+S + + G +G LGHG N +
Sbjct: 173 RGAHFARVAAGATHSLALTS--SGQVYSFGEGSFGALGHGDVNN--------------RA 216
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P + AL E IV +A G + AV G V+TWG YG+LG+ E + ++P+ V
Sbjct: 217 KPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGI 276
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--------GKLKNNGDDWM-----YPKPL 325
++ ++ G + G++Y W G+ N G + + P +
Sbjct: 277 EQ------AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRV 330
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L+ ++R + +G H F + + WG E S A+P +V L G+
Sbjct: 331 DSLADQSIRQVSAGARHSFFVSPGEQL-WGAGANDEGQLALQSVPSVALPTRVPGLPGLP 389
Query: 386 V-ISVACGYGHSLVIVDRTN 404
+ +VA G HS+ ++D ++
Sbjct: 390 MRFAVAAG-DHSIAVLDESS 408
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 14/256 (5%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G L GS + +G G + + P L+ + G VAAG + H +A+ G+
Sbjct: 141 GHLAAWGSNEYGQLG--TGEVGASAAQPRVLKRIRGAHFARVAAG--ATHSLALTSSGQV 196
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y++G G LGHGD R +PT+V L I AG + V+ G +G NK+
Sbjct: 197 YSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKY 256
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
GQLG+G N P PV + + ACG + L+ + GL GQLG G+
Sbjct: 257 GQLGNGEFGNAFLPQPVPG-IEQAVQVACGDHHCIALT--RWGEVYTWGLHSSGQLGQGS 313
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ + + P + +LA ++I +V+ G H+ V ++ G G
Sbjct: 314 NLGSEALNGCLC-------SPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEG 366
Query: 260 RLGHREQKDEWVPRRV 275
+L + +P RV
Sbjct: 367 QLALQSVPSVALPTRV 382
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YTWG G+ G ++ P V Q +V+ + GS NS+ G+LY
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVH----AAGGSYNSAFVTRDGELYTT 94
Query: 310 G-----KLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGEL 362
G +L G + + P + L N+ + G H D+ ++ WG +YG+L
Sbjct: 95 GSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQL 154
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G G G S+A P+ + + G H VA G HSL + V
Sbjct: 155 GTGEVG-ASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQV 196
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 31/335 (9%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
E WG E GQLG G+ +++ IV L YK++ AG +++ + +DG +G
Sbjct: 4 ESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWG 63
Query: 136 WNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
WN+ G LG + E PS V+ L + A + +G + G +YGQ
Sbjct: 64 WNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQ 122
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G E KD + + P+ A+ + +VA G H+V + +G+V++WG
Sbjct: 123 CG----EEPERKDDTGRPLRRDIVIPQRCASKL--VVRQVAAGGTHSVVLTREGHVWSWG 176
Query: 255 FGGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
W P +++ V R L +I+ G+ ++ G L+ WG
Sbjct: 177 -------------QPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGN 223
Query: 312 LK----NNGDDWMYPKPL--MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
+ GD +P+ LSG L + +G H + D WG ++G LG+
Sbjct: 224 NEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + S +P++V++L G ++ V+CG HS+ +
Sbjct: 284 GDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVAL 318
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 45/279 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
P++++ L V+I V A HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 82 PSQVKALANVNI--VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRR 139
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSPV 156
D SK +++ AG +H+VV+T +G+ ++G W G I+ P V
Sbjct: 140 DIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWP------PGDIKQISVPVRV 193
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ L V A GA L+ E ++ G +YGQLG G +
Sbjct: 194 QGL-ERVRLIAVGAFHN--LALQEDGTLWAWGNNEYGQLGTG----------------DT 234
Query: 217 QPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVP 272
QPR P + L+G T+V +A G H+ A+ G VY WG G +GRLG ++ + VP
Sbjct: 235 QPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 294
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+RV++ +++ +S G +S G++Y +G+
Sbjct: 295 QRVNLLVGEDIVQ----VSCGGTHSVALTRDGRMYTFGR 329
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R +A G + H +A+ +G + WG NE GQLG GD R +P V LS + A
Sbjct: 199 VRLIAVG--AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAA 256
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G H+ +T+DG +G +HG+LG G +++ P V LV E + +CG +V
Sbjct: 257 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSV 316
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--AALAGETIV 232
L+ + G +G+LG+G T +++ + P P+ + + AG I
Sbjct: 317 ALT--RDGRMYTFGRGDHGRLGYG---RKVTTGQPMEVPIDIPP-PKNLTDSGDAGRWIA 370
Query: 233 K-VACGTNHTVAV 244
K VA G HT+A+
Sbjct: 371 KLVASGGRHTLAI 383
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIV 104
P ++ L G+ + +AAG H A+ +G Y WGR E G+LG GD K + P V
Sbjct: 240 PITVQGLSGLTLVDIAAG--GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRV 297
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ L I + G +H+V +T DG FG HG+LG G
Sbjct: 298 NLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYG 338
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + L+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
H++ +++ ++G NKHGQLG G ++ + P ++ L+ T A G + L+
Sbjct: 147 YHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT 206
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ GA I G ++GQLG +N+ + P + +L + IV + CG
Sbjct: 207 -LSGA-IFGWGRNKFGQLGLNDEND--------------RFVPNLLKSLRSQKIVYICCG 250
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G ++GQLG G + + Q P+ I +L G +VA G H
Sbjct: 155 GSEVFSWGQNKHGQLGLGFE-------------LKRQSSPQLIKSLLGIPFTQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L IV++ACG H++A+ V++WG +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFTQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 24/234 (10%)
Query: 48 TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL G+D R + C H +A+ +G + WG N GQLG ++ P +
Sbjct: 105 TVCRPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQ 164
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + + AG +H+ V++ G + FGW N GQLG G + P+ V+ L +
Sbjct: 165 SLCEIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK 222
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 223 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 266
Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+A L G + +V CG +HT+ DS +Y++G G G+LG+ EQ + VP V
Sbjct: 267 VAELWGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVPLPV 320
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L+ L + + ++AG H + + G + WG N GQLG GD R PTIV
Sbjct: 159 SPQHLQSLCEIPVAQISAG--GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVK 216
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
LS K G HT +++ G FG GQLG S+++E P V L S+V+
Sbjct: 217 SLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVS 276
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
CG T+ I + G GQLG+G VK ++ P P +
Sbjct: 277 QVTCGRHHTLVFED-SSNRIYSFGCGMQGQLGNG---------EQVK---QSVPLPVLLP 323
Query: 225 ALAGE-TIVKVACGTNHTVAVDSK 247
E T+ K+ G +H+ A+ K
Sbjct: 324 TECTEFTMEKLIAGEHHSFALFFK 347
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R + L ++++ACG H++A+ + G ++ WG G+LG R EQ P+ +
Sbjct: 108 RPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
P A ISAG +S + G ++ WG L + D ++ P + LSG
Sbjct: 168 E----IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI-PTIVKSLSGKK 222
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ G H + + ++G +G+LG+ K P+ V L G V V C
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHN--SLKDEHHPRLVAELWGSKVSQVTC 280
Query: 392 GYGHSLVIVDRTN 404
G H+LV D +N
Sbjct: 281 GRHHTLVFEDSSN 293
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 155/380 (40%), Gaps = 47/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ + P L V +D++ ++ G H V +G Y+WG G+LGHG +P
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCG--GRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPK 393
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLV 160
++ LS I+ G HT VT G+ + G K G LG G+ + P V +
Sbjct: 394 LIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPL 453
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V++ +CG T ++S + G +G LGHG E+
Sbjct: 454 EGIHVSSISCGPWHTAVVTS--AGQLFTFGDGSFGVLGHGDR--------------ESIS 497
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQ 266
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH ++
Sbjct: 498 VPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 557
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMY 321
+ VP V V P ++ G + G +Y ++G+L N D M
Sbjct: 558 GPKLVPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGML 613
Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + N S +H + + + +WG G LG+G K++ P V+
Sbjct: 614 PVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNT--PTLVE 671
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ V V CG + I
Sbjct: 672 ALKDKQVRIVVCGINFTAAI 691
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G +Y+WG GRLGH D P+ +D
Sbjct: 340 PKPLEFAVRLD--VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDA 397
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
N+ +++ G ++ G LY WG L +G+D W+ L
Sbjct: 398 LSHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPL 453
Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G ++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+ +
Sbjct: 454 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRESISVPREVESLKGLRTV 511
Query: 388 SVACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 512 RAACGVWHTAAVVE 525
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G+ ++ P + L G+ + ++AG H +A+ + G
Sbjct: 273 KGGELFAWGQNLHGQLG--IGSQFASIAIPQIVENLSGIPLVQISAG--KAHSMALSMSG 328
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G +D P+++ L K++ G SHT ++T+DG FG
Sbjct: 329 NIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAG 388
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
KHGQLG S +NE+ P V L + VT ACG T+ S G + + G + GQLG
Sbjct: 389 KHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLG-KVFSFGSGKEGQLG 447
Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
+ GT N+ S+ +L +E++ + + +AG
Sbjct: 448 NGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIAG 484
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 25/260 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G + P IV LS + + AG+
Sbjct: 259 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGK 318
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G + PS + L ++ V ACG T L+
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLT- 377
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G ++GQLGH T NE RPR + LAG + ++ACG
Sbjct: 378 -KDGLVFTFGAGKHGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 421
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
HT+A V G V+++G G G+LG+ ++ +P + + N L E+ S +
Sbjct: 422 RQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELTFESRASEKEL- 479
Query: 297 SSCTAGGGQ-LYMWGKLKNN 315
AGG Q + +W KN+
Sbjct: 480 -IMIAGGNQSILLWMGKKNS 498
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N HGQLG GS I + +S +
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLV 312
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A ++ +I + G +GQLG G TD KD P I A
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDG----KDF-----------PSLIEA 357
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L + + +ACG +HT + G V+T+G G +G+LGH ++E PR V N V
Sbjct: 358 LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRV 415
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQ 279
R L + I+++ CG H++A+ G ++ WG +G+LG Q +P+ V+
Sbjct: 248 RFQCILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVE--- 304
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
N P ISAG +S + G +Y WG+ +G D +P + L
Sbjct: 305 -NLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKD--FPSLIEALDNQ 361
Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H + D ++G ++G+LG+ ++ P+ V L G V +A
Sbjct: 362 KVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHN--STQNELRPRLVTELAGNRVTQIA 419
Query: 391 CGYGHSLVIV 400
CG H+L V
Sbjct: 420 CGRQHTLAYV 429
>gi|401883925|gb|EJT48106.1| hypothetical protein A1Q1_02916 [Trichosporon asahii var. asahii
CBS 2479]
Length = 481
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 9 MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
M E+T ++ G +L CG T G+L P LR L + + V +GC +
Sbjct: 1 MTAEQT-EDNWGRVLICGGT----------DCAGDLNEPYILRSLCHIKVTKVLSGCAAN 49
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
+ +A+DV +++G + H D P V + K AGRSH ++
Sbjct: 50 YGIAIDV---------SKKGIVPH-DAPMHVSPRNVGLGNDVKWVGGAAGRSHWFLLDSK 99
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G G N GQLG I P P +V G F+++L+ + + G
Sbjct: 100 GGVWGSGNNVVGQLGLVETLERI-PGPWTRAGEKVVQVTAGHTFSLFLT--DAGKVYACG 156
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
++GQLG+GT E K + K +Y+ Q P G+ I +++ G H++A+D G
Sbjct: 157 SSEHGQLGNGTTGERLVK--AGKTSYDVQAPPHT---FEGKKIAQISSGNQHSLALDEDG 211
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
VY WG+ GY RLG +QKD+ VP V F +N
Sbjct: 212 NVYAWGYAGYARLGLGDQKDQLVPTLVPQFSDSN 245
>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
Length = 1065
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 158/391 (40%), Gaps = 57/391 (14%)
Query: 38 GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G++ G+ P L LVG +D++ +A G H + +G YTWG G+L
Sbjct: 240 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 297
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
+ P +V L+ +K G HT +T G +G H G + RN+
Sbjct: 298 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 357
Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P + ++ + ACG T ++S + G +G LGHG
Sbjct: 358 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 406
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
+ RP+ + +L G + VACG HT A+ G ++TWG G
Sbjct: 407 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 461
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+LGH ++K + +P VD +++ +S G+ + G ++ G ++
Sbjct: 462 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHG---- 513
Query: 320 MYPKPLMD----------LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
P D L +R + SG+ H V S +WG G+LG G Y
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+SS P V+ LEG V SV CG+ + I
Sbjct: 574 NRSS--PTLVEALEGRDVESVVCGFNFTAAI 602
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG NH + +G VYTWG GRL + + P+ V+
Sbjct: 253 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 312
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN---GDDWMYPKPLMDLSG 330
+V ++ GS ++ G+L+ WG+ L N+ + W K L +
Sbjct: 313 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 368
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H + + ++G +G LG+G + A PK+V+ L+G V SV
Sbjct: 369 ISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRVKSV 426
Query: 390 ACGYGHSLVIVD 401
ACG H+ IV+
Sbjct: 427 ACGPWHTAAIVE 438
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 163/409 (39%), Gaps = 62/409 (15%)
Query: 36 RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RKG + +L P L P + G +R+ C H AV +G +TWG NE GQL
Sbjct: 34 RKGK-ECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGSLFTWGANEFGQL 92
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
G G + P V L +K G T V E DG S + W GS
Sbjct: 93 GDGTEDSAKEPKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSD 152
Query: 146 SIR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
R P+ V + +CGA + LS E + G +YGQLG G ++
Sbjct: 153 YPRLFWGAFTPNTV------IKQVSCGAVHVMALS--EDGLLQAWGYNEYGQLGRGRTSQ 204
Query: 203 YNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ + V AY P + IV+V+CG HT A+ G VYTWG G G+
Sbjct: 205 -GLQGARVLNAYARFLDDAPEQV------KIVRVSCGEYHTAAISENGEVYTWGLGSMGQ 257
Query: 261 LGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
LGH + +E +PRRV V +S G V+S GG LY WG
Sbjct: 258 LGHCSLQSGDNELIPRRVVALDGIVV----GDVSCGGVHSCAVTEGGALYAWGGGHVGQL 313
Query: 311 ---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYG 360
NG D + + + +R G+ H V D WG+ YG
Sbjct: 314 GVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYG 373
Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
+ +KS+ P VD G V +A G GHS V+ D ++ E
Sbjct: 374 Q----ATNEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAVLTDACSLKE 417
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 151/338 (44%), Gaps = 38/338 (11%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4024 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4080
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4081 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4140
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L + ACG + T+ +S+ +G+ + G YG+
Sbjct: 4141 NGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSA-DGSLVWAFGDGDYGK 4199
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4200 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4245
Query: 255 ----FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G + + VP + +F + I+ G+ ++ + G++Y WG
Sbjct: 4246 QDRLIGLPEGRARNHNRPQLVPVLLGIFIDD--------IAVGAEHTLALSASGEVYAWG 4297
Query: 311 KLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4298 SNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCH 4335
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 133 AFGWN--KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
F W +HGQL RN + PS S+ CG + T + + ++L G
Sbjct: 3980 VFLWGAGRHGQLAEAG-RNVMIPSGAGSF-SQAQQVICGQNCTFVIQA--NGTVLACGEG 4035
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSK 247
YG+LG G ++ + I+AL G + ++ +CG++ H++A+
Sbjct: 4036 SYGRLGQGNSDDLHVLT--------------VISALQGFVVTQLVTSCGSDGHSMALTES 4081
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4082 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTADGKLF 4137
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQ 358
+G L N + + P+ + L G ++ + G H V AD S + ++G
Sbjct: 4138 TFGNGDYGRLGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGD 4196
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4197 YGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVAL 4235
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 34/303 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ + AL G KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFTRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW-H 746
Query: 357 AQY 359
Y
Sbjct: 747 RPY 749
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
CVS H AV +G YTWG + G+LGHGD R+ PT+V ++S + + G SH
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572
Query: 122 TVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-GADFTVWLSSV 179
T+ +++DG ++ +FG +G+LG G +P V L T C G+ ++ L+S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTST 632
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G LG G+ RP+ I LA IV ++ G +
Sbjct: 633 GQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAATRIVDISIGDS 675
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH 263
H +A+ VY WG G+ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ V + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
VV+E +G N QL G+ ++P C T A + ++ S +G S
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK V+ L+GM V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVVEALQGMFTRKVCAGSQSSLAL 629
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G+ I +A G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4263 PQLVPVLLGIFIDDIAVG--AEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTA 4320
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4321 LQGKNIRQISAGRCHSAAWT 4340
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ R V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 187/464 (40%), Gaps = 77/464 (16%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+SP G + R++ C H AV +G +TWG NE GQLG G + + P V
Sbjct: 49 LSPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKV 108
Query: 105 SELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
+L +K G T + E DG S + W GS R + +
Sbjct: 109 KQLETEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTI 168
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ +V+ CGA V LS E + G +YGQLG G + E
Sbjct: 169 ICQVS---CGAVHVVALS--EDGLLQAWGYNEYGQLGRG-------------ITCEGLQG 210
Query: 220 PRAIAALAGET--------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD--- 268
PR I A A I +V+CG HT A+ KG VYTWG G G+LGH +
Sbjct: 211 PRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNK 270
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----------------K 311
E +PRRV + +L + ++ G V++ G LY WG
Sbjct: 271 ELLPRRVVAL--DGILITD--VACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSF 326
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQK 370
+ ++ + ++ P + ++ + G+ H + D WG+ YG+ +K
Sbjct: 327 IPSDTESFLRNIPALVFPT-GVQLVACGHSHTLICLRDGRIHGWGYNSYGQAA----NEK 381
Query: 371 SSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEID 428
++ P VD G V +A G GHS V+ D ++ E L + + D S +E D
Sbjct: 382 TTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKE-LCEFRLADSVTLSNASEIED 439
Query: 429 RNSTVPPKKGAAKVSNNS-KKRKKSKDSSEEEEEEENSDYESDD 471
V + GA ++ + R+ D SE DYE D+
Sbjct: 440 ----VASRTGADALARLCGRLREHLLDGSE-------LDYEDDE 472
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 156/358 (43%), Gaps = 57/358 (15%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK-KAGA---------GRSHTVVVTEDG 129
Y WG N GQ G K Q R I +LS AGA GR HT V DG
Sbjct: 24 YVWGYNHNGQTGRKGKEQELR--IPKQLSPELFGCPAGANARWLDIACGREHTAAVASDG 81
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE--GASILN 186
+ +G N+ GQLG G+ + P V+ L +E V + +CGA T ++ +I
Sbjct: 82 SLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTIST 141
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
+ L +GQ G++ PR + A I +V+CG H VA+
Sbjct: 142 SRLWVWGQ-NQGSN----------------YPRLFSGAFALNTIICQVSCGAVHVVALSE 184
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAV----ISAGSVNSSCT 300
G + WG+ YG+LG R E + PR ++ + + PE V +S G +++
Sbjct: 185 DGLLQAWGYNEYGQLG-RGITCEGLQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAI 243
Query: 301 AGGGQLYMWG---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
+ G++Y WG +G+ + P+ ++ L G + + G +H V +
Sbjct: 244 SEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGA 303
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVD--------ILEGMHVISVACGYGHSLVIV 400
+WG +Q+G+LG GP S +P + ++ V VACG+ H+L+ +
Sbjct: 304 LYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICL 361
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
K+ +++ + P A A + +ACG HT AV S G ++TWG +G+LG
Sbjct: 39 KEQELRIPKQLSPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGT 98
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ------------LYMWGKLK 313
++ + P++V + + + S + CTA + L++WG +
Sbjct: 99 EEGKKYPKKVKQLETE-------FVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWG--Q 149
Query: 314 NNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQ- 369
N G + YP+ N + C S H V D +WG+ +YG+LG G +
Sbjct: 150 NQGSN--YPRLFSGAFALNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEG 207
Query: 370 -----KSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
+A K +D E + + V+CG H+ I ++ V
Sbjct: 208 LQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEKGEV 249
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 54/331 (16%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP +++ L G I ++AG H VA+ +G +TWG G+LG G R P ++
Sbjct: 77 SPVQVKGLNG--ITAISAGW--AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPIN 132
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ I AG +HT+ + DG ++G N++GQLG+G+ N P V + +
Sbjct: 133 GLTG--ITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSI 190
Query: 166 TACGA-------DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
++ G D TVW + G +GQLG+GT++ P
Sbjct: 191 SSGGGHSLVIKNDGTVW----------SWGCNNFGQLGNGTNSN--------------NP 226
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I+ L G I+ V+ G H+ A+ S G V+ WG G L + + D ++P +
Sbjct: 227 TPHQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQA--- 281
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWN 332
N L I+AG SS G ++W G+L N + D P + LSG
Sbjct: 282 ---NGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSG-- 336
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
+ +D+G + + D + ++G YG+L
Sbjct: 337 ITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 38/345 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
++A + +A+ +G ++WG N+ G LG G + P V L+ I AG
Sbjct: 37 YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLN--GITAISAGW 94
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+H V + DG +G G+LG G+ P+P+ L + +TA + G + T+ L +
Sbjct: 95 AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGL-TGITAISAGWNHTLALKA- 152
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ + G QYGQLG G NT +S++ L Q I ++ G
Sbjct: 153 -DGTLWSWGQNQYGQLGTG-----NTTNSNIPLQVPGQIG-----------ITSISSGGG 195
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++ + + G V++WG +G+LG+ + P ++ N ++ +SAG ++S+
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQIS--GLNGIIN----VSAGVIHSTA 249
Query: 300 TAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
G ++ W G+L N N D P L+G + + +G + +D +
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWEFSSAIKSDGTFW 307
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
WG YG+LG G +S P +V L G+ I Y +L
Sbjct: 308 VWGVNDYGQLGNGSKSDVTS--PMQVSSLSGITAIDTGATYTVAL 350
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 44/293 (15%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG + T+ + DG ++G+N++G LG G+ N P V+ L + +TA + G V L
Sbjct: 42 AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL-NGITAISAGWAHFVAL 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S ++ G+ G+LG GT++ T P I L G I ++
Sbjct: 101 KS--DGTVWTWGVGYSGELGDGTNSLRTT--------------PAPINGLTG--ITAISA 142
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISA 292
G NHT+A+ + G +++WG YG+LG + +P +V P + IS+
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV----------PGQIGITSISS 192
Query: 293 GSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHF-VG 346
G +S G ++ WG NG + P P +SG N + + +G +H +
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTP-HQISGLNGIINVSAGVIHSTALK 251
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D + +WG GEL G + S +P + + L G +I++ G+ S I
Sbjct: 252 SDGTVWNWGCNFRGELANG--NKIDSYIPVQANGLNG--IIAITAGWEFSSAI 300
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V+ G T+A+ + G V++WGF G LG + P V V N + IS
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGI----TAIS 91
Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF- 344
AG + G ++ W G+L + + P P+ L+G + + +G H
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLA 149
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ AD + SWG QYG+LG G +S +P +V + + S++ G GHSLVI
Sbjct: 150 LKADGTLWSWGQNQYGQLGTG--NTTNSNIPLQVP--GQIGITSISSGGGHSLVI 200
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 155/380 (40%), Gaps = 48/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 329 DILLPKPLESNVVLDVLQIACGVK--HAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPC 386
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V L+ + G HT VT G +G H G LG G+ + P P+
Sbjct: 387 LVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 446
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V CG T ++S + G +G LGHG D E ++Y
Sbjct: 447 EGL--QVAFVTCGPWHTALITST--GQLFTFGDGTFGVLGHG-DRE--------NISY-- 491
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHRE 265
PR + +L+G V VACG HT A+ S G ++TWG G RLGH +
Sbjct: 492 ---PREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGD 548
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
+ P + N + S+ T G M +G+L N D
Sbjct: 549 KDARLEPTCISALIDYNF---HRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL 605
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L+G + + G H + + + +WG G LG+G + + P V+
Sbjct: 606 PCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKT--PTLVE 663
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV +ACG +S I
Sbjct: 664 ALKDRHVKYIACGSNYSAAI 683
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++++ACG H V +G ++TWG GRLGH K+ P V+
Sbjct: 333 PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALA 392
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
+ V ++ G ++ G++Y WG L +G D W+ + L G
Sbjct: 393 SSTV----DFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG 448
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + + ++G +G LG+G +++ + P++V+ L G+ +SV
Sbjct: 449 LQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG--DRENISYPREVESLSGLRTVSV 506
Query: 390 ACGYGHSLVIVD 401
ACG H+ IV+
Sbjct: 507 ACGVWHTAAIVE 518
>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
Length = 653
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G I+ V+A H VAV G YTWG G+LGH + I + +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++K A + HTVV TE G +G N+ GQLG S+ + P V L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S++ A A T +S E + G + GQLG+GT N +
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+ + VA HT+ + + G ++TW GHR PRRV +
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHRLV----TPRRVVIVR 389
Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
++N P + I+AG V+S G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
Q P + +L G I V+ H+VAV ++G VYTWGFG GRLGH E Q
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
PR+V + + + I+A ++ GG+++ WG + + D P+
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L + + + N H V ++S +WG + G+LGYG S+ P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350
Query: 384 MHVISVACGYGHSLVI 399
+ VA H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 31/246 (12%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L IK A + H+V V+ G +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTV--VATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG Y + D+ QP PR +++L + IV VA HT +
Sbjct: 270 WGSNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISE 314
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G+LG+ + PR V+ + + VL ++A ++ G
Sbjct: 315 SGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVLKG---VAAAKYHTIVLGADG 370
Query: 305 QLYMWG 310
+++ WG
Sbjct: 371 EIFTWG 376
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 30/282 (10%)
Query: 134 FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
F W + QLG+G+ + P V L + A F S G + G +
Sbjct: 157 FSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARG-EVYTWGFGR 215
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYV 250
G+LGH + ++ + + + PR + G VK +A +HTV G V
Sbjct: 216 GGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEV 267
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+TWG G+LG+ + +PRRV + V ++A + +++ + G+++ WG
Sbjct: 268 FTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHTAVISESGEVFTWG 322
Query: 311 KLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYG- 360
K +N P+ + L G L+ + + H V GAD +WGH
Sbjct: 323 CNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRLVTP 382
Query: 361 -ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ +K+ + P K + +HV+S+A G HS+ + +
Sbjct: 383 RRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 158/391 (40%), Gaps = 57/391 (14%)
Query: 38 GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G++ G+ P L LVG +D++ +A G H + +G YTWG G+L
Sbjct: 241 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 298
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
+ P +V L+ +K G HT +T G +G H G + RN+
Sbjct: 299 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 358
Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P + ++ + ACG T ++S + G +G LGHG
Sbjct: 359 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 407
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
+ RP+ + +L G + VACG HT A+ G ++TWG G
Sbjct: 408 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 462
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+LGH ++K + +P VD +++ +S G+ + G ++ G ++
Sbjct: 463 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHG---- 514
Query: 320 MYPKPLMD----------LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
P D L +R + SG+ H V S +WG G+LG G Y
Sbjct: 515 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 574
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+SS P V+ LEG V SV CG+ + I
Sbjct: 575 NRSS--PTLVEALEGRDVESVVCGFNFTAAI 603
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG NH + +G VYTWG GRL + + P+ V+
Sbjct: 254 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 313
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN---GDDWMYPKPLMDLSG 330
+V ++ GS ++ G+L+ WG+ L N+ + W K L +
Sbjct: 314 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 369
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H + + ++G +G LG+G + A PK+V+ L+G V SV
Sbjct: 370 ISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRVKSV 427
Query: 390 ACGYGHSLVIVD 401
ACG H+ IV+
Sbjct: 428 ACGPWHTAAIVE 439
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H + + +G Y+WG N QLG+G+ IQ P +
Sbjct: 63 IMPRRLDVLCGKKIVDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
EL K+ + G H++ +T DG ++G+N GQ+GSG+ N+ P V +
Sbjct: 122 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 181
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A T ++ + + G GQLG G NT + Q P +
Sbjct: 182 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I++V G HT+A+ +G +Y WG +G+LG + ++ VP +V +R
Sbjct: 228 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 284
Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
V + S N S+ + GQ+YMWG + +C+ S ++
Sbjct: 285 --MVEVTACHSTNISAAKSQSGQVYMWGLCRG-------------------QCLLSPHLT 323
Query: 343 HFVGADS--SCIS 353
HF D +C S
Sbjct: 324 HFTCTDDVFACFS 336
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G + + T++ FG N LG+G ++ I P + L ++ + G+ +
Sbjct: 28 GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 87
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + +G + + G Y QLG+G + T V++ E L + +++V
Sbjct: 88 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 133
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++A+ S G V++WG+ G++G ++ VPR+V ++ V+ ISAG
Sbjct: 134 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVS---ISAGQ 190
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S G +Y WG L N G+ M P L+ + + G H +
Sbjct: 191 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 249
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D + +WG +G+LG G + + +P KV E M
Sbjct: 250 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 285
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 17/268 (6%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
L SP L +++ +VA G H A+ G Y WG ++ GQLG GD + P +
Sbjct: 865 LPSPISLLNCFKLEVLYVACG--KNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRL 921
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
++ L+ + G+ HT+ +TE G A+GW HGQLG G+I ++ P V L +V
Sbjct: 922 ITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQV 981
Query: 164 TA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
A G ++ LS + I + G +GQLG G NT SSV + Q
Sbjct: 982 IKDIAAGHGHSLVLS--DKGQIFSFGSGVFGQLGTG-----NTTKSSVPVL--IQGISEK 1032
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I +A ++CG +H+ + G VYTWG G+LG+ K+ P +++ N
Sbjct: 1033 IILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQIN----EN 1088
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ + ++ G+++ WG
Sbjct: 1089 TFKADCISCGCEFTAAQEKQTGKIFCWG 1116
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 54/192 (28%)
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
++ + P P ++ ++ VACG NHT A+ + G VY WG YG+L
Sbjct: 860 MSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQL---------- 908
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
G G +Y + YP+ + L+
Sbjct: 909 ------------------------------GLGDVY----------ESPYPRLITSLANE 928
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
N+ + G H + +WG +G+LG G + +P V+ L+ + +A
Sbjct: 929 NVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQR--LPVCVNHLKDQVIKDIA 986
Query: 391 CGYGHSLVIVDR 402
G+GHSLV+ D+
Sbjct: 987 AGHGHSLVLSDK 998
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 160/379 (42%), Gaps = 53/379 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 295 PKALESTVVLDVQNIA--CGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDS 352
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
LS I+ G HT VT G+ +G +N G LG G+ + P V +
Sbjct: 353 LSNINIELVACGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGI 411
Query: 162 EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V++ +CG W ++V +S + G +G LGHG + K S+
Sbjct: 412 HVSSISCGP----WHTAVVTSSGQLFTFGDGTFGVLGHG-----DRKSVSI--------- 453
Query: 220 PRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQK 267
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH +++
Sbjct: 454 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 513
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
+ VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 514 AKLVPTCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 569
Query: 323 KPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ LS + + G H + + + +WG G LG+G ++ P V+
Sbjct: 570 NRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN--FPSLVEA 627
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ V S+ACG + I
Sbjct: 628 LKDKQVKSIACGTNFTAAI 646
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P R+ PL G+ + ++ C H V G+ +T+G G LGHGD+
Sbjct: 393 GNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKS 450
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 451 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 510
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
++ P+ V LV ACG TV L++ + G P YGQLG+
Sbjct: 511 DKEAKLVPTCVAALVEPNFCQVACGHSLTVALTT--SGHVYTMGSPVYGQLGN------- 561
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
+ KL + R L+ + ++ACG H + SK VYTWG G GRLGH
Sbjct: 562 -PQADGKLPNRVEGR------LSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 614
Query: 265 EQKDEWVPRRVDVFQRNNV 283
+ D P V+ + V
Sbjct: 615 DTDDRNFPSLVEALKDKQV 633
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G V++WG GRLGH D P+ +D
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 355 NINI----ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 410
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V S ++G +G LG+G +KS ++P++V+ L+G+ +
Sbjct: 411 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRA 468
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 469 ACGVWHTAAVVE 480
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 138/360 (38%), Gaps = 45/360 (12%)
Query: 74 DVEGRCYTWGRN----------ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
D G + WG R G G K+ P + ++ G H
Sbjct: 258 DALGDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGRHAA 317
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGA 182
+VT+ G ++G G+LG G + + P + L + + ACG T ++
Sbjct: 318 LVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDL 377
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
G +G LGHG + + P+ R L G + ++CG HT
Sbjct: 378 YTWGDGTYNFGLLGHGNEVSHWV------------PK-RVNGPLEGIHVSSISCGPWHTA 424
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAVISAGSV------ 295
V S G ++T+G G +G LGH ++K +PR V+ + V V +V
Sbjct: 425 VVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 484
Query: 296 -NSSCTAGGGQLYMWGK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+SS G+L+ WG +GD + P + L N C + V
Sbjct: 485 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF-CQVACGHSLTVALT 543
Query: 349 SS--CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
+S + G YG+LG P Q +P +V+ L V +ACG H V+ +T V
Sbjct: 544 TSGHVYTMGSPVYGQLG-NP--QADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEV 600
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 122/298 (40%), Gaps = 54/298 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R+ L I+ ++ C H +A+ +G Y+WG +E GQLG GD Q RP V+E
Sbjct: 76 PFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTE 134
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
LS K G H++ ++ D ++GW HGQLG SI + + PS V L + VT
Sbjct: 135 LSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQ 194
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G T L++ EG G T Q P+ + A
Sbjct: 195 LAAGYSHTAVLTT-EGKVYTFGGGLYGQLGLGTTSK---------------QTLPQLVQA 238
Query: 226 LAGETIVKVACGTNHTVAVDSKG-------------------------------YVYTWG 254
L + I + CG+ TVAV S+ V+TWG
Sbjct: 239 LEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWG 298
Query: 255 FGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
F +G+LGH D + P V + V A S G+ S GQ+++WG+
Sbjct: 299 FNDHGQLGHSTSMDHLLFPTVVQKLNESFV----ATASVGAEFSVAMDATGQVWVWGR 352
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 43/319 (13%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ---RDRPTIVSELSKY 110
V V + V C H V G YTWG++ +G+LGHGD I+ + P V L +
Sbjct: 26 VEVQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMH 85
Query: 111 KIK--KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATA 167
+IK G HT+ + DG ++G +++GQLG G + P V L + A
Sbjct: 86 RIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVV 144
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG ++ LS+ + + G +GQLG + E P + +L+
Sbjct: 145 CGHYHSLALSA--DQQVYSWGWGVHGQLGLD--------------SIEDALLPSHVTSLS 188
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G + ++A G +HT + ++G VYT+G G YG+LG + +P+ V +++ +
Sbjct: 189 GAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRI---- 244
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+I GS + + +L+ WG+ + + + GN H+
Sbjct: 245 YLICCGSFETVAVSSEQKLFNWGRSPHY---------------FRFHMIHCGNWHYLAVT 289
Query: 348 DS-SCISWGHAQYGELGYG 365
++ +WG +G+LG+
Sbjct: 290 EARQVFTWGFNDHGQLGHS 308
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH---REQKDEWVPRRVDVFQRNNVLPPEA 288
V+++CG +HT V + G VYTWG GRLGH E++ + +P RV++ + +
Sbjct: 33 VRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSV 92
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLM--DLSGWNLRCMDSGNMH 342
+ C G +Y WG + GD + +P+ +LS + G+ H
Sbjct: 93 ACGIEHTLALCRDG---VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYH 149
Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ AD SWG +G+LG + + +P V L G V +A GY H+ V+
Sbjct: 150 SLALSADQQVYSWGWGVHGQLGLDSI--EDALLPSHVTSLSGAFVTQLAAGYSHTAVL 205
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 44/341 (12%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4158
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + TV +S+ +G+ + G YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVST-DGSMVWAFGDGDYGK 4217
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 255 FG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G R +R Q+ VP VF + I+ G+ ++ + G +Y
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQ---VPVLSGVFIED--------IAVGAEHTLALSSTGDVY 4312
Query: 308 MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
WG + + P + L G N+R + +G H
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4353
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ V+ S + ++ G++ T V+ +G LA
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 4050
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V + G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 4155
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
L G+ + + G H + + W G YG+LG G
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTA 4225
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVDIL G+ + VACG S+ +
Sbjct: 4226 KSS--PQKVDILCGIGIKKVACGTQFSVAL 4253
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G +++ + +G H + D ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW-H 746
Query: 357 AQY 359
Y
Sbjct: 747 RPY 749
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVSIQQISAGTSHSL 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I +A G + H +A+ G Y WG N GQLG G PT+++
Sbjct: 4281 PQQVPVLSGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4338
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 16/187 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +AV G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT D
Sbjct: 1897 HTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTAD 1956
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G FG +G+LG G+ N+ P+ V L S ++ ACG + T+ +S+ +G ++
Sbjct: 1957 GKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSA-DGTNVWAF 2015
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +G+LG G NT + P I AL G I KVACGT +VA+
Sbjct: 2016 GDGDFGKLGQG-----NTVGKHL---------PTKIKALQGHVIKKVACGTQFSVALSKY 2061
Query: 248 GYVYTWG 254
G V+TWG
Sbjct: 2062 GKVFTWG 2068
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 152/348 (43%), Gaps = 49/348 (14%)
Query: 77 GRC--YTWGRNERGQL---GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
G+C + WG GQ+ G G + P+ ++ G++ T VV +G
Sbjct: 1799 GKCEAFLWGSGRNGQMCEGGRGAFVPVRVPSFSCS------QQIVCGQNCTFVVQNNGTV 1852
Query: 132 LAFGWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
LA G +G+LG G+ + + S ++ V AT+ G+D L+ E + + G
Sbjct: 1853 LACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHT-LAVTESGEVFSWG 1911
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YG+LGHG + Q RPR I AL GE +++++CG H+ V + G
Sbjct: 1912 DGDYGKLGHGNSDR--------------QRRPRQIEALQGEEVIQLSCGFKHSAVVTADG 1957
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
++T+G G YGRLG ++ VP RV + + + ++ G ++ C + G +
Sbjct: 1958 KLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQI----GYVACGLNHTLCVSADGT-NV 2012
Query: 309 W-------GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS---SCISWGHA 357
W GKL + N P + L G ++ + G F A S +WG
Sbjct: 2013 WAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGT--QFSVALSKYGKVFTWGQE 2070
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ +G S+ P++V L G + V CG H+LV+ +V
Sbjct: 2071 RL--IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDV 2116
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI--QRDRPTIV 104
PT+++ L G I+ VA G + VA+ G+ +TWG+ ER +G D +P V
Sbjct: 2034 PTKIKALQGHVIKKVACG--TQFSVALSKYGKVFTWGQ-ER-LIGQPDTRGGSNCQPQEV 2089
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEV 163
+ LS Y I+ G HT+V+T DG+ +G N GQLG G + + EP V CL +
Sbjct: 2090 ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKN 2149
Query: 164 TATAC 168
C
Sbjct: 2150 IRQVC 2154
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 141/349 (40%), Gaps = 54/349 (15%)
Query: 83 GRNERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLGHGD R P + + L ++ G HT V+T DG G N G
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
QLG G + + L VT CG DFT++L+ + +L+ G +GQLG G
Sbjct: 61 QLGLGHLADISALQRCPSLTHTVTNVTCGWDFTLFLT--DSGRVLSCGSNAFGQLGIGQK 118
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ + V+ A +V VA G H +AV G VY WG G
Sbjct: 119 PNFTAEVQVVESLKAA--------------VVSVAAGLRHALAVTDSGRVYQWGRGLL-- 162
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPP--------EAVISAGSVNSSCTAGGGQLYMWGKL 312
+ K P V + V P +++AGS++ C G L++WG
Sbjct: 163 ---SQAKRTLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSN 219
Query: 313 KN----NGDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGY 364
K+ + D ++ P L G + + SG H ++ +WG YG+LG
Sbjct: 220 KHGQLVSRDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGR 279
Query: 365 GPYGQKS-------------SAMPKKVDILEGMHVISVACGYGHSLVIV 400
+S + +P +V L+G +ACG H+L I+
Sbjct: 280 PAPTSRSPESRSTTDGANLEAGLPAEVKALQG--ATQIACGSEHNLAIL 326
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 114/333 (34%), Gaps = 69/333 (20%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
GR + G N GQLG G K V E K + AG H + VT+ G +G
Sbjct: 100 GRVLSCGSNAFGQLGIGQKPNFTAEVQVVESLKAAVVSVAAGLRHALAVTDSGRVYQWGR 159
Query: 137 NKHGQ----LGSGSIRNEI---EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
Q LG S+ + PSPV L + + V S+ L
Sbjct: 160 GLLSQAKRTLGPSSVPPHLGSTVPSPVPGLDQKTSRM------------VTAGSMHCVCL 207
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
+ G L N++ S A P R++ L GE + V G H +A G
Sbjct: 208 TEDGDLFLWGSNKHGQLVSRDPFLSSAMPVKRSL--LGGERVGGVWSGWTHIIAQTETGR 265
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV---LPPEAVISAGSVNSSCTAGGGQL 306
V+TWG G YG+LG R P N+ LP E G+ +C
Sbjct: 266 VFTWGRGNYGQLG-RPAPTSRSPESRSTTDGANLEAGLPAEVKALQGATQIAC------- 317
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
G+ H+ +SWG ++G G G
Sbjct: 318 --------------------------------GSEHNLAILAGRLLSWGWNEHGMCGDGS 345
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ ++ ++ + + + CG GHS+ +
Sbjct: 346 HTDV-----RQPQLVPALRPLLIGCGAGHSMAV 373
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 90/232 (38%), Gaps = 61/232 (26%)
Query: 52 PLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSEL 107
P+ G+D R V AG S HCV + +G + WG N+ GQL D + P S L
Sbjct: 185 PVPGLDQKTSRMVTAG--SMHCVCLTEDGDLFLWGSNKHGQLVSRDPFLSSAMPVKRSLL 242
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
++ +G +H + TE G +G +GQLG P+P E +T
Sbjct: 243 GGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLG--------RPAPTS-RSPESRSTT 293
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
GA+ L AGLP + AL
Sbjct: 294 DGAN-------------LEAGLPA------------------------------EVKALQ 310
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
G T ++ACG+ H +A+ + G + +WG+ +G G D P+ V +
Sbjct: 311 GAT--QIACGSEHNLAILA-GRLLSWGWNEHGMCGDGSHTDVRQPQLVPALR 359
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG G ++ PS + L + EV ACG + L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALL 258
Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A L G + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
CG HT+A V G V+++G G G+LG+ +D+ +P V V
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKV 344
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 19/200 (9%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L GV + ++AG H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG G +D P+++ L +++ G SH+ ++T+DG FG
Sbjct: 211 NIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAG 270
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325
Query: 193 GQLGHGTDNEYNTKDSSVKL 212
GQLG+G T+D + L
Sbjct: 326 GQLGNG-----GTRDQLIPL 340
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P+ + L ++ F+A G H + +G +T+G + GQLGH RP +V+E
Sbjct: 234 PSLIEALDNQEVEFLACG--GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE 291
Query: 107 LSKYKIKKAGAGRSHTVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
L ++ + GR HT+ D G +FG K GQLG+G R+++ P PV+ SE
Sbjct: 292 LVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSE 348
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G ++GQLG G E++ P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGLGHT--------------ESKDYPSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
AL + + +ACG +H+ + G ++T+G G +G+LGH ++E P
Sbjct: 238 EALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 41/278 (14%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
KI G H ++++ DG + L SI E ++ CG
Sbjct: 98 KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++ LS +G + G +GQLG G + + P+ + LAG
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGRK-------------FPSTTTPQIVEHLAGVP 192
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ +++ G H++A+ G +Y+WG +G+ LGH E KD P ++ V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEALDNQEV----E 246
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ G +S+ G L+ +G K N+ + + P + +L G + + G H
Sbjct: 247 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 306
Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+V S+G + G+LG G + +P KV
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKV 344
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNL 333
P A ISAG +S + G +Y WGK + + + YP + L +
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEV 245
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + D ++G ++G+LG+ ++ P V L G V +ACG
Sbjct: 246 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGNRVTQIACG 303
Query: 393 YGHSLVIV 400
H+L V
Sbjct: 304 RWHTLAYV 311
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H + + +G Y+WG N QLG+G+ IQ P +
Sbjct: 133 IMPRRLDVLCGKKIVDLSYG-SGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 191
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
EL K+ + G H++ +T DG ++G+N GQ+GSG+ N+ P V +
Sbjct: 192 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 251
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A T ++ + + G GQLG G NT + Q P +
Sbjct: 252 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 297
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I++V G HT+A+ +G +Y WG +G+LG + ++ VP +V +R
Sbjct: 298 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 354
Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
V + S N S+ + GQ+YMWG + +C+ S ++
Sbjct: 355 --MVEVTACHSTNISAAKSQSGQVYMWGLCRG-------------------QCLLSPHLT 393
Query: 343 HFVGADS--SCIS 353
HF D +C S
Sbjct: 394 HFTCTDDVFACFS 406
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G + + T++ FG N LG+G ++ I P + L ++ + G+ +
Sbjct: 98 GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 157
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + +G + + G Y QLG+G + T V++ E L + +++V
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 203
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++A+ S G V++WG+ G++G ++ VPR+V ++ V+ ISAG
Sbjct: 204 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVV---VSISAGQ 260
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S G +Y WG L N G+ M P L+ + + G H +
Sbjct: 261 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 319
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D + +WG +G+LG G + + +P KV E M
Sbjct: 320 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 355
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS- 294
C N + V+ +G LG + + +PRR+DV ++ +S GS
Sbjct: 99 CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVD----LSYGSG 154
Query: 295 VNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPL---MDLSGWNLRCMDSGNMHHF-VG 346
+ G++Y WG NG+ P+ M+L + + G+ H +
Sbjct: 155 PHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALT 214
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVIVDRTNV 405
+D SWG+ G++G G +S +P+KV L+ V+S++ G S+ + D +V
Sbjct: 215 SDGEVFSWGYNNCGQVGSGTTANQS--VPRKVASSLQSKVVVSISAGQTSSMALTDNGHV 272
>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 45/258 (17%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ----------------- 97
GV I VAAG H +A+ G+ + WG GQLG G +++
Sbjct: 228 GVKIAAVAAG--GRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASA 285
Query: 98 RDRPTIVSELSKYK--------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
+DR +++ + SK +K G H+VVVT+ G L FGW +GQ G G+ +
Sbjct: 286 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTND 345
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P+ V L S +V + + G TV +++ EG + G Q+GQLG GTD
Sbjct: 346 LLRPTCVSSLSSTQVESISAGLWHTVCITA-EGL-VYAFGGNQFGQLGTGTDQG------ 397
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E PR L G+ +V+CG H V + G +++WG+ YG+LG + D
Sbjct: 398 ------ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSID 451
Query: 269 EWVPRRVDV---FQRNNV 283
+P +V + RN V
Sbjct: 452 RNIPSKVSIDGCLPRNIV 469
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 127/319 (39%), Gaps = 60/319 (18%)
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEI 151
GD + P +V+ KI AG HT+ +++ G +G GQLG G+ ++
Sbjct: 212 GDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVS 271
Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + C+ E+ A+A KD S
Sbjct: 272 SPHIIPCI--ELPASA--------------------------------------KDRS-S 290
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ Y+A A + G + +ACG H+V V G + T+G+G YG+ G D
Sbjct: 291 VIYQASKA--AAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLR 348
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM 326
P V V ISAG ++ C G +Y +G+L D L+
Sbjct: 349 PTCVSSLSSTQV----ESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLL 404
Query: 327 DLSGWNLRC---MDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
D +C + G H+ V D SWG +YG+LG G ++ +P KV I +
Sbjct: 405 DAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRN--IPSKVSI-D 461
Query: 383 GMHVISVACGYGHSLVIVD 401
G ++ CG+ H+L++ +
Sbjct: 462 GCLPRNIVCGWWHTLMLAE 480
>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Bos taurus]
Length = 425
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G Y WG N QLG+G Q P + + L ++ + G H++ + DG A+G
Sbjct: 1 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 60
Query: 136 WNKHGQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+N GQ+GSGS N+ P V CL + V ACG T ++ ++ + G G
Sbjct: 61 YNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ--TSSMAVLDNGEVYGWGYNGNG 118
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLG G + Q P +AAL + ++ CG HT+A+ +G +Y W
Sbjct: 119 QLGLGNNGN--------------QLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 164
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G YG+LG + + P + V ++ V+ A SA + S+ GG +YMWG+ +
Sbjct: 165 GANTYGQLGTGNKNNLLSPAHIMV-EKERVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 221
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGA 117
+ V C S H +A+ +G + WG N GQ+G G + P V+ L ++
Sbjct: 36 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIAC 95
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G++ ++ V ++G +G+N +GQLG G+ N++ P V L S V CG T+ L
Sbjct: 96 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 155
Query: 177 SSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ EG +L A G YGQLG G N + P I I A
Sbjct: 156 TD-EG--LLYAWGANTYGQLGTGNKNNLLS--------------PAHIMVEKERVIEIAA 198
Query: 236 CGTNHTVAVDSK-GYVYTWG 254
C + HT A ++ G+VY WG
Sbjct: 199 CHSAHTSAAKTQGGHVYMWG 218
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
Y QLG+GT N+ + L + +V+VACG++H++A+ + G V+
Sbjct: 11 YSQLGNGTTNQ-------------GLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 57
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMW 309
WG+ G++G ++ PR+V N L + V I+ G +S G++Y W
Sbjct: 58 AWGYNNCGQVGSGSTANQPTPRKV-----TNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 112
Query: 310 GK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G L NNG+ + P + L + + G H D + +WG YG+
Sbjct: 113 GYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 171
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
LG G K++ + ++E VI + AC H+
Sbjct: 172 LG---TGNKNNLLSPAHIMVEKERVIEIAACHSAHT 204
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 125 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 182
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + I+ A +HT
Sbjct: 183 PAHIMVEKERVIEIAACHSAHT 204
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCH 4354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 166/354 (46%), Gaps = 36/354 (10%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
+ L G + + +++G S H +A+ +G + WG N GQLG+G P V L
Sbjct: 35 KELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLK-- 92
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ AG H++ + +DG+ +G +GQ S R+ P V+ L + A A G
Sbjct: 93 DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKEL-KNIVAIAAGW 151
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DF+ L+ S+ G+ +G+LG G+ K S+V P + L +
Sbjct: 152 DFS--LAVGSDGSVWAWGINNHGELGIGS-----LKPSAV---------PVKVKGL--KD 193
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+V V+ G H++A+ G V++WG+ G LG+R +D V V V ++V+ I
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIA----I 249
Query: 291 SAGSVNSSCTAGGGQLYMW--GKLKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
SAG +S G +++W G ++ NG D+ P + L+ + + +G H
Sbjct: 250 SAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGYRHSIAL 307
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D + WGH YG LG + S +P +V L+ +V++VA G HS+ +
Sbjct: 308 KDDGTVWVWGHNSYGVLGSNV--GEHSFLPVQVKGLK--NVVAVAAGRLHSVAL 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 162/400 (40%), Gaps = 73/400 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L D+ V+AG + H +A+ +G + WG GQ + RD T V
Sbjct: 85 PVRVKGLK--DVVAVSAG--TFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKV 138
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
I AG ++ V DG+ A+G N HG+LG GS++ P V+ L +V A
Sbjct: 139 KELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL-KDVVAV 197
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+ G + L+ ++ + G + G+LG+ T+D +V + + IA
Sbjct: 198 SAGLYHS--LALKRDGTVWSWGYNEDGELGNRP-----TEDYTVSVPVRVKGLSDVIAIS 250
Query: 227 AG---------------------------------------ETIVKVACGTNHTVAVDSK 247
AG +V +A G H++A+
Sbjct: 251 AGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDD 310
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+ WG YG LG + ++P +V + NV+ ++AG ++S G ++
Sbjct: 311 GTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVA----VAAGRLHSVALTKNGTIW 364
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG +NN P + L N+ + +G H + D + SWG
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIAAGGSHTLAIKRDGTVWSWGANNK 422
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G Y KSS +P V L + V G HSL +
Sbjct: 423 GQLGNGTY--KSSYIPTCVKGLN--KAVLVEAGSQHSLAV 458
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 60/332 (18%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G + G+ + +GR + NL P +++ L V VA H +A+ +G
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNL--PYKVKWLDNV----VAIAAGGSHTLAIKRDG 412
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
++WG N +GQLG+G PT V L+K + +AG+ H++ V +DG +G+
Sbjct: 413 TVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEAGS--QHSLAVDKDGTVWVWGF- 469
Query: 138 KHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFT--------VW------------- 175
+ ++ + P P++ ++++T A G D+ +W
Sbjct: 470 IESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTD 529
Query: 176 -----------LSSVEGASILNAGLPQY------GQLGHGTDNEYNTKDSSVKLAYEAQP 218
L +++ + AG G + D + K+ + +
Sbjct: 530 SSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFS----E 585
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P I L+G +VKVA G H++A+ G V++WG+ YG+LG+ ++ +VP RV
Sbjct: 586 KPVKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVK-- 641
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
NNV+ I+AG +S G +++WG
Sbjct: 642 GLNNVVA----IAAGDYHSMALKKDGTVWVWG 669
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 49/228 (21%)
Query: 41 DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGR----NERGQLGHGDK 95
D ++ S T+L L + ++R +AAG H +AV +G ++WG N+ L +K
Sbjct: 529 DSSVSSVTKLIRLDNIKNVRSIAAGY--FHSLAVRTDGTVWSWGDTNLDNKEKYLNFSEK 586
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
P + LS + K AG+ H++ + +DG ++G+N +GQLG+G+ P
Sbjct: 587 -----PVKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVR 639
Query: 156 VRCLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
V+ L + V A A G D TVW V G++I GQLG N +
Sbjct: 640 VKGL-NNVVAIAAGDYHSMALKKDGTVW---VWGSNI-------RGQLG-----RRNIEF 683
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
S+V L E + +V +A G H+VA+ G V+ WG
Sbjct: 684 STVPLKVEKL-----------DNVVAIAAGDTHSVALKKDGTVWVWGI 720
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 156/380 (41%), Gaps = 48/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 266 DILLPRPLESNVVLDVLQIACGVK--HAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR 323
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V ++ + G HT VT G +G H G LG G+ + P P+
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 383
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V CG T ++S + G +G LGHG D E ++Y
Sbjct: 384 EGL--QVALVTCGPWHTALITST--GQLFTFGDGTFGVLGHG-DRE--------NVSY-- 428
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVD-----------SKGYVYTWGFGGYGRLGHRE 265
PR + +L+G + VACG HT A+ S G ++TWG G RLGH +
Sbjct: 429 ---PREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 485
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
+ P V +N + S+ T G M +G+L N D
Sbjct: 486 KDARLEPTCVPSLIEDNF---HRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL 542
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D +G ++ + G H + + + +WG G LG+G + S P V+
Sbjct: 543 PCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKS--PTLVE 600
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV +ACG +S I
Sbjct: 601 ALKDRHVKYIACGSNYSSAI 620
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + ++++ACG H V +G ++TWG GRLGH K+ PR V+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVEAMA 329
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V ++ G ++ G+LY WG L +G D W+ + L G
Sbjct: 330 STTV----DFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG 385
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + + ++G +G LG+G +++ + P++V+ L G+ I+V
Sbjct: 386 LQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG--DRENVSYPREVESLSGLRTIAV 443
Query: 390 ACGYGHSLVIVD 401
ACG H+ I++
Sbjct: 444 ACGVWHTAAIIE 455
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
SP + L GV I A G HC+AVD +GR Y WG NE GQ G + ++
Sbjct: 87 SPAPVDALAGVSIVQAAIG--GWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALR 144
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
RD P K K+++ AG +H+VV+T+DG+ +G W G I+ P
Sbjct: 145 RDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP------GDIKQISTPVR 198
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
V+ L V A GA L+ E + G +YGQLG G +
Sbjct: 199 VQGL-ENVKVIAVGAFHN--LALTEDGILWAWGNNEYGQLGTG----------------D 239
Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
QPR P + L+ ++V +A G H+ A+ +G VY WG G +GRLG + K VP
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++V++ +++ +S G +S G+++ +G+
Sbjct: 300 QKVELLAGEDIIQ----VSCGGTHSVALTRDGRMFSYGR 334
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 142/336 (42%), Gaps = 38/336 (11%)
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG E GQLG G + D V+ L + AG +++ + DG +GWN+
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQ 72
Query: 139 HGQLG-SGSIRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G LG + E P+PV L VS V A G L+ + G +YGQ
Sbjct: 73 RGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHC---LAVDDKGRAYAWGGNEYGQC 129
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G E K+ + P P+ A + +VA G H+V + G+V+TWG
Sbjct: 130 G----EEAERKEDGTRALRRDIPIPQGCAPKL--KVRQVAAGGTHSVVLTQDGHVWTWG- 182
Query: 256 GGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
W P +++ R L VI+ G+ ++ G L+ WG
Sbjct: 183 ------------QPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNN 230
Query: 313 K----NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ GD +P+ LS +L + +G H + + +WG ++G LG+G
Sbjct: 231 EYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG 290
Query: 366 PYGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
KSS M P+KV++L G +I V+CG HS+ +
Sbjct: 291 --DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 159/383 (41%), Gaps = 56/383 (14%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYK 111
L + + V AG S + +A+ +GR +TWG N+RG LGH + + + P V L+
Sbjct: 41 LDALAVSAVVAG--SRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGA 170
I +A G H + V + G + A+G N++GQ G + R E R L ++ C
Sbjct: 99 IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKE---DGTRALRRDIPIPQGCAP 155
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--------RPRA 222
V + AG GT + T+D V + P P
Sbjct: 156 KLKV--------RQVAAG---------GTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVR 198
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ L E + +A G H +A+ G ++ WG YG+LG + + P RV+ +
Sbjct: 199 VQGL--ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS 256
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSGWNLRC 335
++ I+AG +S+ G++Y WG+ ++ GDD M P+ + L+G ++
Sbjct: 257 LVD----IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQ 312
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG----------M 384
+ G H + D S+G +G LGYG M +D+
Sbjct: 313 VSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQW 372
Query: 385 HVISVACGYGHSLVIVDRTNVGE 407
VACG H+L I T E
Sbjct: 373 QARYVACGGRHTLAIATWTEADE 395
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G + GQLG G E V L V+A G+ + L+ + G
Sbjct: 14 LAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNS--LAICADGRLFTWGWN 71
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
Q G LGH + + E+ P P + ALAG +IV+ A G H +AVD KG
Sbjct: 72 QRGTLGHPPETKT-----------ESSPAP--VDALAGVSIVQAAIGGWHCLAVDDKGRA 118
Query: 251 YTWGFGGYGRLGHREQKDEWVPR--RVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
Y WG YG+ G ++ E R R D+ P V ++AG +S G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHV 178
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ WG+ GD P+ N++ + G H+ + D +WG+ +YG+LG G
Sbjct: 179 WTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+S P +V+ L + ++ +A G HS + V
Sbjct: 239 DTQPRS--QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEV 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +P R++ L V + V A H +A+ +G + WG NE GQLG GD R +P
Sbjct: 192 QISTPVRVQGLENVKVIAVGA----FHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPI 247
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
V LS + AG H+ +T++G A+G +HG+LG G + + + P V L
Sbjct: 248 RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAG 307
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E + +CG +V L+ + + G +G+LG+G T +++ + P
Sbjct: 308 EDIIQVSCGGTHSVALT--RDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPG 362
Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
+ G+ + VACG HT+A+
Sbjct: 363 TSGGDSGGQWQARYVACGGRHTLAI 387
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + L+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
H++ +++ ++G NKHGQLG G ++ + P ++ L+ T A G + L+
Sbjct: 147 YHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT 206
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ GA I G ++GQLG +N+ + P + +L + IV + CG
Sbjct: 207 -LSGA-IFGWGRNKFGQLGLNDEND--------------RFVPNLLKSLRSQKIVYICCG 250
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G ++GQLG G + + Q P+ I +L G +VA G H
Sbjct: 155 GSEVFSWGQNKHGQLGLGFE-------------LKRQSSPQLIKSLLGIPFTQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L IV++ACG H++A+ V++WG +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFTQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 162/388 (41%), Gaps = 53/388 (13%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GA++ + + P L + +D++ +A C H V +G +TWG G+LGHG
Sbjct: 294 GAINLDALLPKPLESALVLDVQLIA--CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD 351
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSP 155
P +V L+ + G H VT G+ ++G H G LG G+ + P
Sbjct: 352 VSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKR 411
Query: 156 VRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V + V + ACG T +++ + G +G LGH N + S A
Sbjct: 412 VNGPLEGLRVASIACGPWHTALVTTT--GLLFTFGDGTFGVLGH------NDRKS----A 459
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
Y PR + +L G V+ ACG HT AV S G ++TWG G GRL
Sbjct: 460 YS----PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRL 515
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGD 317
GH +++ VP V +N V S+ + T GG M +G+L +
Sbjct: 516 GHGDKEQRLVPTCVAALVDHNF---RQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQA 572
Query: 318 DWMYP----KPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKS 371
D P L++ ++ C HH + +S +WG G LG+G ++
Sbjct: 573 DGKLPGLVEGKLVEAYVEDIAC----GAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRN 628
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P V+ L+ V S+ACG + I
Sbjct: 629 T--PTLVEALKEKQVKSIACGATFTAAI 654
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 134/356 (37%), Gaps = 43/356 (12%)
Query: 77 GRCYTWGRNERG--------QLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVT 126
G Y WG ++G G I D P + ++ G H +VT
Sbjct: 269 GDVYMWGEGVGDGILGGGIHRIGSGGAINLDALLPKPLESALVLDVQLIACGGKHAALVT 328
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGASIL 185
+ G +G G+LG G + P V L S T ACG ++
Sbjct: 329 KQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSW 388
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G G LGHG D + R L G + +ACG HT V
Sbjct: 389 GDGTHNLGLLGHGNDISHWIPK-------------RVNGPLEGLRVASIACGPWHTALVT 435
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------VFQRNNVLPPEAVISAG-SVNS 297
+ G ++T+G G +G LGH ++K + PR V+ V V AV+ +S
Sbjct: 436 TTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSS 495
Query: 298 SCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSS 350
+ + G+L+ WG + +GD + P + L N R + G ++ +
Sbjct: 496 AGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGG 555
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
+ G + YG+LG Q +P V+ L +V +ACG H V+ + V
Sbjct: 556 VFTMGSSTYGQLG---DPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEV 608
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 145/329 (44%), Gaps = 65/329 (19%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3997 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4053
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4112
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4113 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4158
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV TA G Y G+
Sbjct: 4159 TFGNGDYGRLGLGNTSNKKLPERV------------------------TALEG--YQIGQ 4192
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
+NN + + L+ N V AD S + ++G YG+LG G K
Sbjct: 4193 ARNN-------------TLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4239
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
SS P+KVD+L G+ + VACG S+ +
Sbjct: 4240 SS--PQKVDVLCGIGIKKVACGTQFSVAL 4266
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 40/344 (11%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4045 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4101
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4102 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4161
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL-----------VSEVTATACGADFTVWLSSVEGASI 184
+G+LG G+ N+ P V L ACG + T+ +S+ +G+ +
Sbjct: 4162 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSA-DGSMV 4220
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G YG+LG G A+ P+ + L G I KVACGT +VA+
Sbjct: 4221 WAFGDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G+VYT+G L ++ P+++ V + ++ G+ ++ A G
Sbjct: 4267 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTG 4322
Query: 305 QLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+Y WG + + P + L G N+R + +G H
Sbjct: 4323 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4366
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 584
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 585 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 630
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 631 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 685
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 686 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 745
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 746 PYCVDLEESTFSHLRSFLERYCD 768
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 373 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 430
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 431 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 487
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 488 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 533
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 534 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 593
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 594 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 653
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 654 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 712
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 713 LDGIAIQQISAGTSHSL 729
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 505 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 560
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 561 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 620
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 621 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 663
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 664 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 697
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +V+E +G N QL G+ ++P T A + ++ S +G
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 420
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ G YG+LG G N +T KL +E + +++ G HT
Sbjct: 421 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 468
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A ++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 469 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 525
Query: 302 GGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-S 353
G+LY WG +L + + + P + D+S N+ + G+ H + D + S
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 583
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 584 FGGGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 627
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4294 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4352 LQGKNVRQISAGRCHSAAWT 4371
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 578 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 635
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 636 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 693
Query: 141 QLGSGS 146
Q G G+
Sbjct: 694 QCGQGN 699
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV LS + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG ++ PS + L ++ V ACG T L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258
Query: 177 SSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A LAG + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELAGNRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
CG HT+A V G V+++G G G+LG+ +D+ +P + V
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV 344
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 29/227 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L G+ + ++AG H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLSGIPLAQISAG--EAHSMALSMSG 210
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG +D P+++ L K++ G SHT ++T+DG FG
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAG 270
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELAGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKE 325
Query: 193 GQLGHGTDNEYNTKDSSVKLA----------YEAQPRPRAIAALAGE 229
GQLG+G T+D + L +E+ + + +AGE
Sbjct: 326 GQLGNG-----GTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGE 367
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G ++GQLG + +KDS P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGL---DHTESKDS-----------PSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
AL + + +ACG +HT + G ++T+G G +G+LGH ++E P
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLS 189
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
P A ISAG +S + G +Y WGK + ++ + P + L +
Sbjct: 190 G----IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKV 245
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + D ++G ++G+LG+ ++ P V L G V +ACG
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELAGNRVTQIACG 303
Query: 393 YGHSLVIV 400
H+L V
Sbjct: 304 RWHTLAYV 311
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P ++ G G HTV V +DG G N
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + G YGQ+G
Sbjct: 64 GQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAVYGQIGLS 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T EY +++ PR I +L+ IV+VACG +H++A+ +++WG Y
Sbjct: 120 TAEEY------IRV-------PRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K E PR + P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
+ D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+L V
Sbjct: 283 VN--PRKVFELMGSIVTQIACGRQHTLAFV 310
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 35 RRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
RRK GALD ++ VA C H +A++ +G+ ++WG GQ+
Sbjct: 72 RRKPEQVGALDAQII---------------VAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 91 GHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIR 148
G + R P + LS +I + G H++ +++D + ++G N++GQLG G I+
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
E P ++ L A + ++ GA I G ++GQLG + + N
Sbjct: 177 KECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA-IFGWGRNKFGQLGLTDETDRNV--- 232
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
P + +L + I+ + CG +HT A+ +G V+T+G GGYG+LGH
Sbjct: 233 -----------PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281
Query: 269 EWVPRRV 275
E PR+V
Sbjct: 282 EVNPRKV 288
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 38/368 (10%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+L G+T + +G G +D +V P R + ++R V GC S H V V +G Y
Sbjct: 1 MLCWGNTSFGQLGL--GGIDEEVVLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVY 56
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
T G N+ GQLGH DK R +P V L I G +HT+ + + G ++G +G
Sbjct: 57 TCGCNDLGQLGH-DK-SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 141 QLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
Q+G + I P ++ L ++ ACG ++ LS + + I + G QYGQLG G
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS--KDSDIFSWGQNQYGQLGLG 172
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
L + + PR I +L+G +A G H+ A+ G ++ WG +
Sbjct: 173 -------------LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGK 311
G+LG ++ D VP + + ++ A+ G V + G GQL
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG---- 275
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ + + P+ + +L G + + G H FV + S+G G+LG G
Sbjct: 276 -HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTIN 334
Query: 370 KSSAMPKK 377
+ S K
Sbjct: 335 RKSPFTVK 342
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 28/320 (8%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSH 121
A C + H + + +G+ Y+ G N+ GQLGH + + RP +++ L Y I +A G +H
Sbjct: 352 AACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAH 411
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
++ +T G ++G N GQLG + +I P +R + + +V A G + L++
Sbjct: 412 SLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTN- 470
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YGQLG G NE K S+ P + +LAG I +ACG N
Sbjct: 471 -SGELYAWGSNAYGQLGLGMTNE---KVST----------PTLVQSLAGVPIAFIACGGN 516
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H+ AV G ++ WG +G+LG + P ++ + V V +
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGV---RYVSCGDDFSVFL 573
Query: 300 TAGGGQLY----MWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
TAGGG +G+L + + ++ + P+ + +L G + + G H FV +
Sbjct: 574 TAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 353 SWGHAQYGELGYGPYGQKSS 372
+G + G+LG G G ++
Sbjct: 634 GFGLSGVGQLGIGIVGNYNT 653
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 31/300 (10%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATA- 167
+I +A G SHT+++T DG + G N HGQLG S+ N+ P + L + + A
Sbjct: 348 EIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNK-RPQLLTALENYIITQAC 406
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG ++ L++ + + G GQLG TD Q PR I ++A
Sbjct: 407 CGTAHSLALTN--WGQVYSWGSNAVGQLGQETDT-------------TRQIIPRLIRSIA 451
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ +V++A G H +A+ + G +Y WG YG+LG +E V V V P
Sbjct: 452 AKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLG-LGMTNEKVSTPTLVQSLAGV--PI 508
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSG-N 340
A I+ G +S + G ++ WGK N+ + +P L L +R + G +
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDD 568
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
F+ A + G +G+LG+G + +P+ V L G + +ACG H+L V
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHG--SCNNEILPRMVFELMGSKITQIACGRRHTLAFV 626
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GEL GS + +G G + + +PT ++ L GV I F+A G H AV G
Sbjct: 472 GELYAWGSNAYGQLGL--GMTNEKVSTPTLVQSLAGVPIAFIACG--GNHSFAVSKSGAI 527
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG+N GQLG D R PT + L ++ G +V +T G G
Sbjct: 528 FGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTF 587
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG GS NEI P V L+ S++T ACG T+ G I GL GQLG G
Sbjct: 588 GQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLSGVGQLGIG 646
Query: 199 TDNEYNT 205
YNT
Sbjct: 647 IVGNYNT 653
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
PR + + + I + ACG +HT+ + + G +Y+ G +G+LGH E P+ +
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTAL 397
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD--WMYPKPLMDLSGW 331
+ N + +A G+ +S GQ+Y W G+L D + P+ + ++
Sbjct: 398 E--NYIITQA--CCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + +G+ H +S +WG YG+LG G +K S P V L G+ + +A
Sbjct: 454 QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVST-PTLVQSLAGVPIAFIA 512
Query: 391 CGYGHSLVI 399
CG HS +
Sbjct: 513 CGGNHSFAV 521
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT+LR L + +R+V+ G V + G +T G GQLGHG P +V E
Sbjct: 549 PTQLRTLRSLGVRYVSCG--DDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFE 606
Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L KI + GR HT+ V G FG + GQLG G + N P VR
Sbjct: 607 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVR 658
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 29/265 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R +A G H VA++ G+ +TWG G LGH + P +V + +IK
Sbjct: 170 VRCIALG--GLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIAT 227
Query: 118 GRSHTVVVTEDGNSLAFGWNK---HGQLGSGSIRNE----IEPSPVRCLVSEVTATACGA 170
+HT +TE G +G ++ LG G NE P VR L + V A +CG
Sbjct: 228 SGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGG 287
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
FT+ L V+G + N G +LG G + +E +P P +L
Sbjct: 288 FFTMALG-VDG-KLWNWGANTNFELGRGNNIG----------GWEPKPVP----SLEDTP 331
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
I+++ CG H++A+ G V +WG+GG+G+LGH ++E VPR +D V +
Sbjct: 332 IIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRV---SYIA 388
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNN 315
GS +++ TA G+LYMWG K++
Sbjct: 389 CCGSSSAAVTA-EGKLYMWGNAKDS 412
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G L P R+R L A C +A+ V+G+ + WG N +LG G+ I P
Sbjct: 265 GGLSIPCRVRAL---PAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEP 321
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V L I + G H++ +T DG L++G+ HGQLG SI+NE P + L
Sbjct: 322 KPVPSLEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALAD 381
Query: 162 E-VTATAC 168
+ V+ AC
Sbjct: 382 KRVSYIAC 389
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 130/335 (38%), Gaps = 62/335 (18%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ +WGR GQLG G + R P+ V+ LS I HT+ +
Sbjct: 60 QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNI--------HTLALAP---------- 101
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQL S S N+ S +CG + S + + G G+LG
Sbjct: 102 --GQLPSFSGDNQDSGDDG----SFELGISCGLFHS---SLLVNGKVWIWGKGDGGRLGF 152
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G +N + +L E++ +A G H+VA+++ G V+TWG+GG
Sbjct: 153 GHENPVFVPTLNSRL----------------ESVRCIALGGLHSVALNALGQVFTWGYGG 196
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
+G LGH E VPR V+ R + + + ++G+ ++ T G++Y WG+
Sbjct: 197 FGALGHSVYHRELVPRLVEGSWRGRI---KHIATSGAHTAAITE-SGEVYTWGRDEGDGR 252
Query: 312 -------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
N G P + L G +G D +WG ELG
Sbjct: 253 LGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGR 312
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G PK V LE +I + CG HSL +
Sbjct: 313 G--NNIGGWEPKPVPSLEDTPIIQIVCGGYHSLAL 345
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 69 HCVAVDVEGRCYTWGR---------------NERGQLGHGDKIQRDRPTIVSELSKYKIK 113
H A+ G YTWGR NE G L ++ R P V+ +S
Sbjct: 231 HTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRV-RALPAPVAAVS----- 284
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADF 172
G T+ + DG +G N + +LG G+ EP PV L + + CG
Sbjct: 285 ---CGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYH 341
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
++ L+ +L+ G +GQLGH SS+ + + PR I ALA + +
Sbjct: 342 SLALTG--DGKVLSWGYGGHGQLGH----------SSI----QNEKVPRVIDALADKRVS 385
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVIS 291
+AC + + AV ++G +Y WG +LG + + P V ++ L P V+S
Sbjct: 386 YIACCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLS 445
Query: 292 --AGSVNSSC 299
G+ ++ C
Sbjct: 446 VAVGASHAMC 455
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 140/357 (39%), Gaps = 41/357 (11%)
Query: 66 VSCHCV--AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
+SC ++ V G+ + WG+ + G+LG G + PT+ S L ++ G H+V
Sbjct: 124 ISCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHSV 181
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV----RCLVSEV-TATACGADFTVWLSS 178
+ G +G+ G LG E+ P V R + + T+ A A T
Sbjct: 182 ALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAIT----- 236
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E + G + + + + + P +AA V+CG
Sbjct: 237 -ESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAA--------VSCGG 287
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
T+A+ G ++ WG LG W P+ V + P I G +S
Sbjct: 288 FFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDT----PIIQIVCGGYHSL 343
Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMD-SGNMHHFVGADSSC 351
G G++ W G+L ++ + P+ + L+ + + G+ V A+
Sbjct: 344 ALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKL 403
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDIL---EGM---HVISVACGYGHSLVIVDR 402
WG+A+ +LG P + P +V L +G+ HV+SVA G H++ +V R
Sbjct: 404 YMWGNAKDSQLGV-PGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D + C H +A+ +G+ +WG GQLGH P ++ L+ ++
Sbjct: 329 DTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIA 388
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
S + VT +G +G K QLG + E++ SPV +
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP-EVQTSPVEVIF 431
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 44/341 (12%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4046 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4102
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4103 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4162
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + TV +S+ +G+ + G YG+
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVST-DGSMVWAFGDGDYGK 4221
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4222 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Query: 255 FG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G R +R Q+ VP VF + I+ G+ ++ + G +Y
Sbjct: 4268 QDRLIGLPEGRARNHNRPQQ---VPLLAGVFIED--------IAVGAEHTLALSSTGDVY 4316
Query: 308 MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
WG + + P + L G N+R + +G H
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4357
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 133/330 (40%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S ++ G++ T V+ +G LA
Sbjct: 3998 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLAC 4054
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4113
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V + G ++
Sbjct: 4114 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 4159
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4185
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
L G+ + + G H + + W G YG+LG G
Sbjct: 4186 ----------------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTA 4229
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVDIL G+ + VACG S+ +
Sbjct: 4230 KSS--PQKVDILCGIGIKKVACGTQFSVAL 4257
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 22/243 (9%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +++ V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN-VGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWG 310
WG
Sbjct: 688 AWG 690
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 153/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQ--------------------------------- 279
G G +GRLGH + +P V D+
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 280 ---RNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVGG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--IN 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 25/282 (8%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
G+LY WG+ +GD P + N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGG 589
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I +A G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4285 PQQVPLLAGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4342
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4343 LQGKNVRQISAGRCHSAAWT 4362
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 157/376 (41%), Gaps = 42/376 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +VA G H V + +TWG G+LGHG +P
Sbjct: 250 DVLVPKPLESNVMLDVSYVACGVK--HAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPR 307
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V LS ++ G HT VT G+ +G H G LG GS + P V +
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 367
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V+A +CG T ++S + G +G LGHG + +Y
Sbjct: 368 DGLPVSAVSCGTWHTALITS--SGQLYTFGDGTFGVLGHG---------NRASCSY---- 412
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ--- 266
P+ + +L G + V+CG HT AV S G ++TWG G RLGH ++
Sbjct: 413 -PKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK 471
Query: 267 -KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
K VP +D I + T G ++G+L N +D YP+ +
Sbjct: 472 LKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSP---VYGQLGNPNNDGRYPRLV 528
Query: 326 MD-LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L G + + G+ H V ++ +WG G LG+G + +P V+ L+
Sbjct: 529 EEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRK--VPTLVEALKD 586
Query: 384 MHVISVACGYGHSLVI 399
V VACG + I
Sbjct: 587 RSVKRVACGSSFTAAI 602
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + VACG H V + V+TWG GRLGH + + PR V+
Sbjct: 254 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLS 313
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
NV +I+ G ++ G LY WG +N W+ + L G
Sbjct: 314 TCNV----ELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDG 369
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + + ++G +G LG+G + S + PK+V+ L+G+ ISV
Sbjct: 370 LPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG--NRASCSYPKEVESLKGLRTISV 427
Query: 390 ACGYGHSLVIVD 401
+CG H+ +V+
Sbjct: 428 SCGVWHTAAVVE 439
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C S H + G YTWG+ G+LGHGD R PT+V L +K+ G S
Sbjct: 538 VEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSS 597
Query: 121 HTVVVTE 127
T + +
Sbjct: 598 FTAAICQ 604
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 123/271 (45%), Gaps = 29/271 (10%)
Query: 49 RLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ +P V I+ V A H +A+ G YTWG G LGHG + P ++
Sbjct: 125 QYKPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGP 184
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQLGSGS--IRNE---IEPSPVRCLVS 161
K +I AG SHT VTE G +G ++ G+LG G+ I +E P+ V+ L
Sbjct: 185 WKDRIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV 244
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLAYEAQPRP 220
+ CG FT+ L+ + + + G +LGHGT N + +P
Sbjct: 245 PIALVYCGGFFTMALT--KSGQLWSWGGNANHELGHGTRANNW---------------KP 287
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ +AAL T+V+VACG H A+ G V TWG+GG G+LGH ++ P V+
Sbjct: 288 KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMAD 347
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
I+ G ++ G LY WGK
Sbjct: 348 KTC----TYIACGPAWTAAITENGDLYTWGK 374
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 148/359 (41%), Gaps = 52/359 (14%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL----------------SKYKIKKAGA-- 117
E + WGR GQ+GHG + P ++S L +K ++ G
Sbjct: 34 ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G H+V+ E + +G G+LG + N+ +P V + V + G + L+
Sbjct: 94 GLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALT 151
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
V ++ G +G LGHG+ YE + PR + + IV V+ G
Sbjct: 152 EV--GNVYTWGYGAFGALGHGS--------------YERELLPRLLEGPWKDRIVHVSAG 195
Query: 238 TNHTVAVDSKGYVYTWGFG-GYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
+HT AV G +YTWG G GRLGH + DE R Q +V P A++ G
Sbjct: 196 GSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--PIALVYCGG 253
Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVG 346
+ GQL+ WG N+ ++W PK + L L + G H +
Sbjct: 254 FFTMALTKSGQLWSWGGNANHELGHGTRANNWK-PKVVAALEDVTLVQVACGGFHAAALT 312
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D I+WG+ G+LG+G ++ P V+ + +ACG + I + ++
Sbjct: 313 QDGKVITWGYGGNGQLGHGTL--ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+G L PT+++ L D+ C +A+ G+ ++WG N +LGHG + +
Sbjct: 230 EGALSRPTKVQAL---DVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK 286
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P +V+ L + + G H +T+DG + +G+ +GQLG G++ N EP+ V +
Sbjct: 287 PKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346
Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ T ACG +T ++ E + G + QLG + V+
Sbjct: 347 DKTCTYIACGPAWTAAIT--ENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQF------- 397
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
P+A+ ++ V+CG NH V + S+
Sbjct: 398 PQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRD-----RPTIVSELSKYKI 112
R V H AV G YTWGR+E G+LGHG+ D RPT V L I
Sbjct: 188 RIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPI 246
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
G T+ +T+ G ++G N + +LG G+ N +P V L + ACG
Sbjct: 247 ALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGF 306
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ + ++ G GQLGHGT E P + A+A +T
Sbjct: 307 HAAALT--QDGKVITWGYGGNGQLGHGT--------------LENGKEPAIVEAMADKTC 350
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+ACG T A+ G +YTWG +LG KDE
Sbjct: 351 TYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 19/218 (8%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + L+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
H++ +++ ++G NKHGQLG G ++ + P ++ L+ T A G + L+
Sbjct: 147 YHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT 206
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ GA I G ++GQLG +N+ + P + +L + IV + CG
Sbjct: 207 -LSGA-IFGWGRNKFGQLGLNDEND--------------RFVPNLLKSLRSQKIVYICCG 250
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G ++GQLG G + + Q P+ I +L G +VA G H
Sbjct: 155 GSEVFSWGQNKHGQLGLGFE-------------LKRQSSPQLIKSLLGIPFTQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L IV++ACG H++A+ V++WG +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFTQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 46/280 (16%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
SP + LVGV I A G HC+AVD +GR Y WG NE GQ G + ++
Sbjct: 84 SPAHVDALVGVKIVQAAIG--GWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALR 141
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
RD P K K+++ AG +H+VV+T++G+ +G W G I+N P
Sbjct: 142 RDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPP------GDIKNISTPVR 195
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V+ L +V+ A GA + LS IL A G +YGQLG G
Sbjct: 196 VQGL-EQVSMIAVGAFHNLALSV---DRILWAWGNNEYGQLGIG---------------- 235
Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWV 271
+ QPR P + L+ ++V +A G H+ A+ +G VY WG G +GRLG + K V
Sbjct: 236 DTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 295
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P +V + +++ +S G +S G+++ +G+
Sbjct: 296 PLQVQLLAGEDIVQ----VSCGGTHSVVLTSDGRIFSYGR 331
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 162/375 (43%), Gaps = 47/375 (12%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G ++DR + L Y + AG +++ + +DG+ +GWN+ G
Sbjct: 13 WGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGT 72
Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E P+ V LV ++ A G L+ + G +YGQ G
Sbjct: 73 LGHPPETKTESSPAHVDALVGVKIVQAAIGGWHC--LAVDDKGRAYAWGGNEYGQCG--- 127
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E K+ + P P+ A + +VA G H+V + +G+V+TWG
Sbjct: 128 -EEPERKEDGTRALRRDIPIPQRCALKL--KVRQVAAGGTHSVVLTQEGHVWTWG----- 179
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN- 315
W P + + R L ++I+ G+ ++ + L+ WG NN
Sbjct: 180 --------QPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWAWG---NNE 228
Query: 316 ------GDDWMYPKPLM--DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
GD +P+ LS +L + +G H + + +WG ++G LG+G
Sbjct: 229 YGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFG- 287
Query: 367 YGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE--RLDQLDVYDG-KASSQ 422
KSS M P +V +L G ++ V+CG HS+V+ + R D + DG K ++
Sbjct: 288 -DDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTG 346
Query: 423 DNEEIDRNSTVPPKK 437
E+ N +PP K
Sbjct: 347 HPMEVPIN--LPPPK 359
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 169/386 (43%), Gaps = 56/386 (14%)
Query: 49 RLRPLVGVDIRFVAAGCV-SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSE 106
R R + +D V+A S + +A+ +G +TWG N+RG LGH + + + P V
Sbjct: 31 RARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDA 90
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------SGSIRNEIEPSPVR 157
L KI +A G H + V + G + A+G N++GQ G + ++R +I P P R
Sbjct: 91 LVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDI-PIPQR 149
Query: 158 C-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
C L +V A G +V L+ EG + G P + K+ S
Sbjct: 150 CALKLKVRQVAAGGTHSVVLTQ-EG-HVWTWGQPW---------PPGDIKNIST------ 192
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L E + +A G H +A+ ++ WG YG+LG + + P RV+
Sbjct: 193 ---PVRVQGL--EQVSMIAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVE 247
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLS 329
+++ I+AG +S+ G++Y WG+ ++ GDD M P + L+
Sbjct: 248 GLSNLSLVD----IAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLA 303
Query: 330 GWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAM--------PKKVDI 380
G ++ + G H V +D S+G +G LG G M PK
Sbjct: 304 GEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTS 363
Query: 381 LEGM-HVISVACGYGHSLVIVDRTNV 405
EG+ VACG H+L IV T++
Sbjct: 364 SEGLWQANYVACGGRHTLAIVTWTDM 389
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ +P R++ L V + V A H +A+ V+ + WG NE GQLG GD R +P
Sbjct: 189 NISTPVRVQGLEQVSMIAVGA----FHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPI 244
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
V LS + AG H+ +T++G A+G +HG+LG G + + + P V+ L
Sbjct: 245 RVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAG 304
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E + +CG +V L+S I + G +G+LG D T +++ P
Sbjct: 305 EDIVQVSCGGTHSVVLTS--DGRIFSYGRGDHGRLG---DGRKVTTGHPMEVPINLPPPK 359
Query: 221 RAIAALAGETIVKVACGTNHTVAV 244
+ ++ VACG HT+A+
Sbjct: 360 TSTSSEGLWQANYVACGGRHTLAI 383
>gi|326492157|dbj|BAJ98303.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1391
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 158/400 (39%), Gaps = 84/400 (21%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
+I F + C + + D G+ Y+ G G+LG G DKI PT++ L K+ K
Sbjct: 90 EINFTSVKCGLRYAIFQDDNGKLYSCGYGNLGELGLGKDKIYTKIPTLIEGLDYKKVSKY 149
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI---------------------------- 147
G +H V ++ D ++G +G+ G+ +
Sbjct: 150 SCGPNHVVALSTDHRIFSWGDGNYGKQGTSGVTAVFRPHILPFTKVTASNQKIQEDGSPV 209
Query: 148 --RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
R EP PV +V ACG DF+++ + +G L G G+LG G
Sbjct: 210 RERQRKEPPPVDYRWIDV---ACGGDFSIF-AGEQGTFAL--GRETNGRLGVGA------ 257
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+E P I I+ +ACG H++A DS+GY Y+WG G GRLGH
Sbjct: 258 -------MFEPASIPINIGFFQKIKIMGIACGKGHSMAWDSEGYAYSWGDGTDGRLGHSI 310
Query: 266 Q------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD- 318
+ K E VP+R+ ++ +L ++S G+ ++ G++ WGK +N +
Sbjct: 311 EKGFHMSKFEIVPKRITTLEKYRIL----LMSCGNSHTCALTNKGEILTWGKASSNKKEE 366
Query: 319 ---------WMYPKPLM----------DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
+ P+ L+ + + C + N + D +WG +
Sbjct: 367 TFAGNYKLLYFAPRKLIVSPTGDGNTTEPVFIKVVCGPTHNAA--IDKDFKLYTWGDSTE 424
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LGY + P V + VI V CG + VI
Sbjct: 425 NCLGYP--SEDDVFSPTLVQRFSSIKVIDVGCGDNFTFVI 462
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 26/243 (10%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKK 114
VD R++ C + +G + GR G+LG G + P + K KI
Sbjct: 220 VDYRWIDVACGGDFSIFAGEQG-TFALGRETNGRLGVGAMFEPASIPINIGFFQKIKIMG 278
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSE---VTATA 167
G+ H++ +G + ++G G+LG G ++ E P R E + +
Sbjct: 279 IACGKGHSMAWDSEGYAYSWGDGTDGRLGHSIEKGFHMSKFEIVPKRITTLEKYRILLMS 338
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG T L++ IL G ++ + T + KL Y A PR + I +
Sbjct: 339 CGNSHTCALTN--KGEILTWG-------KASSNKKEETFAGNYKLLYFA-PR-KLIVSPT 387
Query: 228 GE------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
G+ +KV CG H A+D +YTWG LG+ + D + P V F
Sbjct: 388 GDGNTTEPVFIKVVCGPTHNAAIDKDFKLYTWGDSTENCLGYPSEDDVFSPTLVQRFSSI 447
Query: 282 NVL 284
V+
Sbjct: 448 KVI 450
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 20/108 (18%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
DGN P F+ C H A+D + + YTWG + LG+ +
Sbjct: 389 DGNTTEPV-----------FIKVVCGPTHNAAIDKDFKLYTWGDSTENCLGYPSEDDVFS 437
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
PT+V S K+ G G + T V+ G NKH L S +++
Sbjct: 438 PTLVQRFSSIKVIDVGCGDNFTFVI---------GCNKHRNLPSKALK 476
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
VSC HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H
Sbjct: 24 VSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
+ ++ G +G N GQLG ++ P V+ L ++ V +CG + T L+
Sbjct: 84 SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G AG YGQLGH + N+ + PR + L G + ++ACG H
Sbjct: 144 GVFTFGAG--SYGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187
Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
T+A V S G +Y +G G G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 62 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG +GQLG S+ +E+ P V L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHG 198
ACG T L+ V + ++ A G GQLG G
Sbjct: 180 QIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG 212
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL 159
P ++ +L++ I + G H + + DG +G N HGQLG G ++ P VR L
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
A + S+ GA + G+ GQLG + + +
Sbjct: 70 EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + L + +V ++CG HT + G V+T+G G YG+LGH DE PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 170
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
PR I L +TI++V+CG H +A+ S G +TWG +G+LG +E + P+RV
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
+ P A ++AG +S + G ++ WG + N G D P + L
Sbjct: 70 EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124
Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H V S ++G YG+LG+ + + P++V L G V +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN--PRRVLELMGSEVTQIA 182
Query: 391 CGYGHSLVIV 400
CG H+L V
Sbjct: 183 CGRQHTLAFV 192
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 114 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL 171
Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLG G + + +Q P+ + +L G + +VA G H+ A+ G V+
Sbjct: 48 HGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--- 308
WG G+LG ++KD P V + + V+ IS G +++ G ++
Sbjct: 95 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150
Query: 309 --WGKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
+G+L ++ +D + P+ +++L G + + G H FV + ++G G+LG
Sbjct: 151 GSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Query: 364 YG 365
G
Sbjct: 211 TG 212
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 148/352 (42%), Gaps = 50/352 (14%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+TWG N GQLG G + P ++ ++ +K G H+ V+T+ G G N
Sbjct: 13 FTWGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQN 72
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG G + L V ACG DFT+ L+ + + G +GQLG
Sbjct: 73 KNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAG--SGQVFSCGSNSFGQLG 130
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+E +T + I +L E +V VA G H +AV G V+ WG G
Sbjct: 131 ISQTSEGSTVS-------------KRIESLQ-EKVVNVAAGLRHALAVTENGSVFQWGIG 176
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKL 312
+ R + E VP + Q V E ++++GS +++ G+LY+WG
Sbjct: 177 MSSQ-AKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNN 235
Query: 313 KN----NGDDWMYPKPLMD---LSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELG- 363
K+ N DD++ +D G +R + +G H + +WG A YG+LG
Sbjct: 236 KHKQLVNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGR 295
Query: 364 ----YGPYGQKSSA-----------MPKKVDILEGMHVISVACGYGHSLVIV 400
Y GQ A P V L G +ACG H+L IV
Sbjct: 296 SGLPYEQMGQDGKASDENSVKEPLHSPALVPALTGAS--QIACGSEHNLAIV 345
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 49/360 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + G + G+N+ GQLG G + S L + + G T+++
Sbjct: 56 HSAVLTDTGELFLCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGS 115
Query: 129 GNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G + G N GQLG S + + L +V A G L+ E S+
Sbjct: 116 GQVFSCGSNSFGQLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHA--LAVTENGSVFQW 173
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G+ Q E + ++ +P + L + VA G++H A+ +
Sbjct: 174 GIGMSSQAKRACQGE-------MVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDE 226
Query: 248 GYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
G +Y WG + +L KD++V P+++D + E V + G +
Sbjct: 227 GELYVWGNNKHKQL---VNKDDFVLKPQKIDA----HYFGGEKVRRVWNGWTHMVAQTEM 279
Query: 304 GQLYMWGK-----LKNNG-------------DDWMYPKPLMD------LSGWNLRCMDSG 339
G+++ WG+ L +G D+ +PL L+G + + G
Sbjct: 280 GKVFTWGRADYGQLGRSGLPYEQMGQDGKASDENSVKEPLHSPALVPALTGASQ--IACG 337
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ H+ C SWG ++G G G + + P+ +D+L ++ V CG GHS+
Sbjct: 338 SEHNLAIVGGQCFSWGWNEHGMCGNGT--EANVCAPQPLDVLSSAKLLYVGCGAGHSMAF 395
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLY 307
++TWG YG+LG ++D ++P+ + F N E V I+ G +S+ G+L+
Sbjct: 12 LFTWGANSYGQLGLGHREDVFLPQVLKGFLCNR----ETVKNITGGGGHSAVLTDTGELF 67
Query: 308 MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYG 360
+ G+ KN + +D + K L G ++ + G + + S G +G
Sbjct: 68 LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+LG + S+ + K+++ L+ V++VA G H+L + + +V
Sbjct: 128 QLGISQTSEGST-VSKRIESLQ-EKVVNVAAGLRHALAVTENGSV 170
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
L SP + L G C S H +A+ V G+C++WG NE G G+G + P
Sbjct: 319 LHSPALVPALTGAS----QIACGSEHNLAI-VGGQCFSWGWNEHGMCGNGTEANVCAPQP 373
Query: 104 VSELSKYKIKKAGAGRSHTV 123
+ LS K+ G G H++
Sbjct: 374 LDVLSSAKLLYVGCGAGHSM 393
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 164/380 (43%), Gaps = 49/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G + H +G +TWG G+LGHG RP
Sbjct: 243 DVLIPKPLESDVVLDVNQIACG--TRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V LS + G HT VT G+ +G + G LG G+ + P V +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+V + ACG+ W S++ +S + G +G LGHG D E LAY
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV----DSKGY------VYTWGFGGYGRLGHREQ 266
P+ + AL+G +KVACG H+ A+ + G +YTWG G RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
+ VP+ V + ++ G + A G+++ G+L N D
Sbjct: 463 EPRLVPKCVQALLEYDF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L+ + + G H + + S +WG G LG+G K P V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S++CG + I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ACGT H +G V+TWG GRLGH D P+ V+
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V +IS G ++ G L+ WG L G + W+ K L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + S ++G +G LG+G +++ A PK+V+ L G I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420
Query: 390 ACGYGHSLVIVDRTN 404
ACG HS IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 20/243 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H +A+ G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT D
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD 1146
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G L FG +G+LG G++ N P V+ L + + ACG + TV +S+ +G++
Sbjct: 1147 GKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVSA-DGSTTWAF 1205
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG G + +T P I AL+G + KVACGT +VA+
Sbjct: 1206 GDGDYGKLGLGNTSAKST--------------PVKIEALSGLKVKKVACGTQFSVALTRD 1251
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G+V TWG + + P++V + + E V+ GS ++ G ++
Sbjct: 1252 GFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFI---EEVV-VGSEHTLALTSDGNVW 1307
Query: 308 MWG 310
WG
Sbjct: 1308 GWG 1310
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 139/337 (41%), Gaps = 35/337 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG GQL R T + S ++ G++ T V+ +G LA G +
Sbjct: 994 YLWGGGRHGQLCEAG---RSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSY 1050
Query: 140 GQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G+ + + S ++ V T+ G+D L+ E + + G YG+LG
Sbjct: 1051 GRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHS-LALTESGEVFSWGDGDYGKLG 1109
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG + Q RPR I AL GE ++++ACG H+ V G + T+G G
Sbjct: 1110 HGNSDR--------------QRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNG 1155
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM------WG 310
YGRLG + P RV + ++ ++ G ++ C + G +G
Sbjct: 1156 DYGRLGLGTVCNRKTPERVKALENYHI----GHVACGLNHTVCVSADGSTTWAFGDGDYG 1211
Query: 311 KL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
KL N P + LSG ++ + G + D ++WG + +G
Sbjct: 1212 KLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRL--IGQTEAQ 1269
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ P+KV L G + V G H+L + NV
Sbjct: 1270 MRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNV 1306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 128/310 (41%), Gaps = 34/310 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK---AGAGRSHTVVVTED 128
+ G G G+LG G+ TIVS L + + + + H++ +TE
Sbjct: 1035 VIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTES 1094
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
G ++G +G+LG G+ + P + L EV ACG + + +V+G +L
Sbjct: 1095 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSA-VVTVDG-KLLTF 1152
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G YG+LG GT T P + AL I VACG NHTV V +
Sbjct: 1153 GNGDYGRLGLGTVCNRKT--------------PERVKALENYHIGHVACGLNHTVCVSAD 1198
Query: 248 GYVYTWGF--GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G TW F G YG+LG + P +++ V ++ G+ S G
Sbjct: 1199 GST-TWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKV----KKVACGTQFSVALTRDGF 1253
Query: 306 LYMWG--KLKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
+ WG +L + M P+ + L+G + + G+ H + +D + WG
Sbjct: 1254 VLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNA 1313
Query: 359 YGELGYGPYG 368
G+LG G G
Sbjct: 1314 DGQLGLGHTG 1323
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTI 103
+P ++ L G+ ++ VA G + VA+ +G TWG++ +G + R P
Sbjct: 1223 TPVKIEALSGLKVKKVACG--TQFSVALTRDGFVLTWGQDRL--IGQTEAQMRGHCTPQK 1278
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
V+ L+ + I++ G HT+ +T DGN +G N GQLG G EP
Sbjct: 1279 VTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREP 1328
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCH 4354
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 28/292 (9%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------KIQR 98
+ P ++ L DI+ A G H +A+ +G Y+WG N +LG+G I
Sbjct: 65 LYPKKIEVLCDKDIKTFACGS-GPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILV 123
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+ PT+ + L+ I G H++ +TE+G A+G N GQ+GS N+ P V
Sbjct: 124 NIPTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTS 183
Query: 159 LVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
++ ++ +CG T + + + G GQLG G Y
Sbjct: 184 NLAGKKIVHISCGQ--TSSMVVTDNGEVYGWGYNGVGQLGIGN--------------YVN 227
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
Q P + +L G I+KVACG HT+A+ +G +Y WG YG+LG + + P V
Sbjct: 228 QMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNP--VL 285
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
V + A + + S+ GG++YMWG + P P D+
Sbjct: 286 VTHEMGRISDIAALHYNHI-STAVGVGGRVYMWGNCRGQSISTPTPTPFTDM 336
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 125/309 (40%), Gaps = 67/309 (21%)
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
++RD + + + Y G + ++V +D + G N G LG + + P
Sbjct: 15 LERDTISQIHMVMVY-----GTLGNEALLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKK 69
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ L ++ ACG+ V L+ E + + G Y +LG+GT N+ L
Sbjct: 70 IEVLCDKDIKTFACGSGPHV-LALTEKGEVYSWGHNSYCELGNGTCNQ--------GLTP 120
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P A L + IV VACG++H++A+ +G VY WG G++G ++ PR+
Sbjct: 121 ILVNIPTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQ 180
Query: 275 VDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
V +N+ + V IS G +S G++Y
Sbjct: 181 V----TSNLAGKKIVHISCGQTSSMVVTDNGEVY-------------------------- 210
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
WG+ G+LG G Y + + P +V L G+ +I VACGY
Sbjct: 211 -------------------GWGYNGVGQLGIGNYVNQMT--PSRVGSLIGVVIIKVACGY 249
Query: 394 GHSLVIVDR 402
H+L + D
Sbjct: 250 AHTLALSDE 258
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N ++P+R+ L+GV I VA G H +A+ EG+ Y WG N GQLG G+K P
Sbjct: 227 NQMTPSRVGSLIGVVIIKVACG--YAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPV 284
Query: 103 IVSE 106
+V+
Sbjct: 285 LVTH 288
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 161/385 (41%), Gaps = 52/385 (13%)
Query: 46 SPTRL----RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
SP R+ RPL R V C H + + YT+G E G+LGHG++ P
Sbjct: 1731 SPIRMASFPRPLR----RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEP 1786
Query: 102 TIVSELSKY---------KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
V + + + GR HT+ VT G+ FGW + G+LG+G + +
Sbjct: 1787 VSVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLY 1846
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
P+ V L + A ACG + T+ L+ AG G+LG+G++ +
Sbjct: 1847 PTRVTDL-QNIAAVACGREHTLALTRKGRVFAFGAGFG--GRLGNGSETD---------- 1893
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ P A+ L I + G H+ A+ ++G V TWGFG G LGH ++ + P
Sbjct: 1894 ----EELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEP 1949
Query: 273 RRVDVFQRNNVLPPE----------AVISAGSVNSSCTAGGGQLYMWGKLK--NNGDDWM 320
RR++ N + E + I+ GS ++ G LY WG +++
Sbjct: 1950 RRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYI 2009
Query: 321 YPKPLMDLSGWNLRC-MDSGNMHHFVGADSS--CISWGHAQY---GELGYGPYGQKSSAM 374
++ L+ +R +SG G +S C + GH G G + A
Sbjct: 2010 TAPEMVVLTPQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDAR 2069
Query: 375 PKKVDILEGMHVISVACGYGHSLVI 399
K++ +L VACG H++ I
Sbjct: 2070 VKRIGVLGEFEFSQVACGAYHAVAI 2094
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 106/259 (40%), Gaps = 31/259 (11%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR G+ + PTR+ L + A C H +A+ +GR + +G G+
Sbjct: 1830 WGEAGRLGTGETGSSLYPTRVTDLQNI----AAVACGREHTLALTRKGRVFAFGAGFGGR 1885
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG+G + + P V L Y+I AG H+ ++ +G+ L +G+ G LG G N
Sbjct: 1886 LGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDN 1945
Query: 150 EIEPSPVR---------------CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+EP + S V+A ACG+ T L++ ++ G GQ
Sbjct: 1946 CLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT--LAATSDGALYGWGDAAAGQ 2003
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
L EY T V L P+ I I VACGT + ++G+++ WG
Sbjct: 2004 LS----VEYITAPEMVVLT------PQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWG 2053
Query: 255 FGGYGRLGHREQKDEWVPR 273
G E D V R
Sbjct: 2054 SPAAGNGAPLEVDDARVKR 2072
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 158/376 (42%), Gaps = 46/376 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 301 PKSLESAVVLDVQNIA--CGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEA 358
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
LS I+ G HT VT G+ +G + G LG G+ + P V +
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIH 418
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V+ +CG T ++S + G +G LGHG SV L PR
Sbjct: 419 VSYISCGPWHTAVVTS--AGQLFTFGDGTFGALGHG-------DRKSVSL-------PRE 462
Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
+ +L G V+ ACG HT AV S G ++TWG G GRLGH +++ +
Sbjct: 463 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
VP RV + NV P ++ G + G +Y ++G+L D P +
Sbjct: 523 VPTRVALV---NVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICV 579
Query: 326 -MDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
LS + + G H + + + +WG G LG+G +++ P V+ L+
Sbjct: 580 EWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNT--PTLVEALKD 637
Query: 384 MHVISVACGYGHSLVI 399
V S+ACG + I
Sbjct: 638 KDVKSIACGTNFTAAI 653
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 110/261 (42%), Gaps = 38/261 (14%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P R+ PL G+ + +++ C H V G+ +T+G G LGHGD+
Sbjct: 399 GNQVSHWVPKRVNGPLEGIHVSYIS--CGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS 456
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 457 VSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 516
Query: 146 SIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
++ P+ V LV+ ACG TV L++ + G P YGQLG
Sbjct: 517 DKEAKLVPTRV-ALVNVKPNFCQVACGHSLTVALTT--KGHVYTMGSPVYGQLG------ 567
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
D + + E + L+ + ++ACG H + S+ VYTWG G GRLG
Sbjct: 568 IPQADGKLPICVEWK--------LSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 619
Query: 263 HREQKDEWVPRRVDVFQRNNV 283
H + D P V+ + +V
Sbjct: 620 HGDTDDRNTPTLVEALKDKDV 640
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+++ + + +ACG H V +G +++WG GRLGH D P+ ++
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G+ W+ + L G
Sbjct: 361 NTNI----ELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG 416
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G +KS ++P++V+ L+G+ +
Sbjct: 417 IHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG--DRKSVSLPREVESLKGLRTVRA 474
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 475 ACGVWHTAAVVE 486
>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 45/258 (17%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ----------------- 97
GV I VAAG H +A+ G+ + WG GQLG G +++
Sbjct: 215 GVKIAAVAAG--GRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASA 272
Query: 98 RDRPTIVSELSKYK--------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
+DR +++ + SK +K G H+VVVT+ G L FGW +GQ G G+ +
Sbjct: 273 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTND 332
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P+ V L S +V + + G TV +++ EG + G Q+GQLG GTD
Sbjct: 333 LLRPTCVSSLSSTQVESISAGLWHTVCITA-EGL-VYAFGGNQFGQLGTGTDQG------ 384
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E PR L G+ +V+CG H V + G +++WG+ YG+LG + D
Sbjct: 385 ------ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSID 438
Query: 269 EWVPRRVDV---FQRNNV 283
+P +V + RN V
Sbjct: 439 RNIPSKVSIDGCLPRNIV 456
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 127/319 (39%), Gaps = 60/319 (18%)
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEI 151
GD + P +V+ KI AG HT+ +++ G +G GQLG G+ ++
Sbjct: 199 GDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVS 258
Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + C+ E+ A+A KD S
Sbjct: 259 SPHIIPCI--ELPASA--------------------------------------KDRS-S 277
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ Y+A A + G + +ACG H+V V G + T+G+G YG+ G D
Sbjct: 278 VIYQASKA--AAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLR 335
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM 326
P V V ISAG ++ C G +Y +G+L D L+
Sbjct: 336 PTCVSSLSSTQV----ESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLL 391
Query: 327 DLSGWNLRC---MDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
D +C + G H+ V D SWG +YG+LG G ++ +P KV I +
Sbjct: 392 DAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRN--IPSKVSI-D 448
Query: 383 GMHVISVACGYGHSLVIVD 401
G ++ CG+ H+L++ +
Sbjct: 449 GCLPRNIVCGWWHTLMLAE 467
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 66 VSC-----HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
VSC H + V G+ Y+ G N GQLG G +V L ++ A
Sbjct: 139 VSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYH 198
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSS 178
H+VVV+ DG++ +FG N GQLG G+ N++ P V L S V ACG T++L+
Sbjct: 199 HSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-LPSPHLVRLAACGQYHTIFLT- 256
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E + + G GQLG G+ + N P IAAL +ACG
Sbjct: 257 -EEGMVFSCGKNLNGQLGLGSRSSTNV--------------PTLIAALQERPASMIACGY 301
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
+HT V G ++T+G+ G+LG P +V+ + V+ IS G+ +
Sbjct: 302 SHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVK----ISCGTHFTC 357
Query: 299 CTAGGGQLYMW-----GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
+ G+L+ + G+L + D + P + ++ NL + G HH V
Sbjct: 358 VLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACG-FHHLV 409
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+SP+ L +R ++A C H V V +G +++G N+ GQLG G + + P V
Sbjct: 175 MSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV 234
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
S + ++ A G+ HT+ +TE+G + G N +GQLG GS + P+ + L
Sbjct: 235 ELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPA 294
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ ACG T + +E + G GQLG G + ++ P +
Sbjct: 295 SMIACGYSHTCVV--LEDGKLFTFGYNHQGQLGLGHTDSVSS--------------PMQV 338
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
L +VK++CGT+ T + G ++++G +G+LG + D VP V + N+
Sbjct: 339 ETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNL 398
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
A C H + + EG ++ G+N GQLG G + + PT+++ L + G SHT
Sbjct: 245 AACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHT 304
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
VV EDG FG+N GQLG G + P V L + +V +CG FT LS E
Sbjct: 305 CVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLS--ES 362
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ + G +GQLG G DS+ +L P + ++ + + ++ACG +H
Sbjct: 363 GELWSFGCNCHGQLGLG--------DSTDRLV------PVLVPSMTKKNLSEIACGFHHL 408
Query: 242 VAVD 245
VA+
Sbjct: 409 VAIS 412
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 53/350 (15%)
Query: 76 EGRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
EG C + G+N +G+LGH ++ ++V L + +I K AG + +TE+G
Sbjct: 37 EGDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYC 96
Query: 134 FGWNKHGQL------GSGSIRNE-------IEPSPVRCLVSEVTATACGADFTVWLSSVE 180
G N GQL GS + E +E P C V +V+ GA+ + ++S
Sbjct: 97 CGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFN-GAEHVLVVTS-- 153
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +GQLG G+ TK S L E+ R ++A +C +H
Sbjct: 154 AGQVYSCGCNNHGQLGLGS-----TKMSPSLLLVESLKHVRVLSA---------SCSYHH 199
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI---SAGSVNS 297
+V V S G +++G G+LG + ++ +P RV+ LP ++ + G ++
Sbjct: 200 SVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-------LPSPHLVRLAACGQYHT 252
Query: 298 SCTAGGGQLYMWGKLKNNGDDWM-------YPKPLMDLSGWNLRCMDSGNMHH-FVGADS 349
G ++ GK NG + P + L + G H V D
Sbjct: 253 IFLTEEGMVFSCGK-NLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDG 311
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
++G+ G+LG G SS P +V+ L + V+ ++CG + V+
Sbjct: 312 KLFTFGYNHQGQLGLGHTDSVSS--PMQVETLRNVKVVKISCGTHFTCVL 359
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P +V LS + + AG+
Sbjct: 380 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 439
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G E PS + L ++ V ACG T L+
Sbjct: 440 AHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT- 498
Query: 179 VEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G +YGQLGH T NE RPR + LAG + +VACG
Sbjct: 499 -KDGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQVACG 542
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
HT+A V G V+++G G G+LG+ ++ +P + + N L E+ S +
Sbjct: 543 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSEKEL- 600
Query: 297 SSCTAGGGQ-LYMWGKLKN 314
AGG Q + +W KN
Sbjct: 601 -IMIAGGNQSILLWMGKKN 618
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G L ++ +P + L GV + ++AG H +A+ + G
Sbjct: 394 KGGELFAWGQNLHGQLG--VGRLFTSIPTPQLVEHLSGVPLVQISAG--KAHSMALSMSG 449
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G D P+++ L K++ G SHT ++T+DG FG
Sbjct: 450 NIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAG 509
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V L + VT ACG T+ S G + + G + GQLG
Sbjct: 510 KYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLG-KVFSFGSGKEGQLG 568
Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
+ GT N+ S+ +L +E++ + + +AG
Sbjct: 569 NGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAG 605
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N HGQLG G + I + +S V
Sbjct: 374 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLV 433
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A ++ +I + G GQLG G N + P I AL
Sbjct: 434 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTN--------------GEDFPSLIEAL 479
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ + +ACG +HT + G V+T+G G YG+LGH ++E PR V N V
Sbjct: 480 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRV 536
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R L ++I+++ CG H++A+ G ++ WG +G+LG +P V
Sbjct: 369 RFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTS-IPTPQLVEHL 427
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWN 332
+ V P ISAG +S + G +Y WG+ NG+D +P + L
Sbjct: 428 SGV--PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGED--FPSLIEALDNQK 483
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H + D ++G +YG+LG+ ++ P+ V L G V VAC
Sbjct: 484 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQVAC 541
Query: 392 GYGHSLVIV 400
G H+L V
Sbjct: 542 GRWHTLAYV 550
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 44/375 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P L +D++ VA G H V +G Y WG+ + G+LG + P IV
Sbjct: 293 LVPKLLESTAMLDVQNVALG--GNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIV 350
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL-GSGSIRNEIEPSPVRCLVS-- 161
LS ++KK G HT +T+ G+ +G + L G IR++ V
Sbjct: 351 DSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI 410
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+++ ACG T +SS + G +G LGHG Y + P+
Sbjct: 411 SISSIACGEWHTAIVSSC--GRLFTYGDGTFGVLGHGN--------------YHSFSSPK 454
Query: 222 AIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHREQKDEW 270
+ +L G + VACGT HT A+ S G ++TWG GRLGH + ++
Sbjct: 455 EVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKL 514
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--NNGDDWMYPKPLM-- 326
VP V + + +S G + + G+++ G K G+ + + ++
Sbjct: 515 VPTCVSQLVDYDFVQ----VSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVE 570
Query: 327 -DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L ++ + G+ H V S S +WG + GELG G + + P V+ L
Sbjct: 571 GMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYT--PCFVEALRDR 628
Query: 385 HVISVACGYGHSLVI 399
V ++ CG ++ I
Sbjct: 629 QVDTITCGPSFTVAI 643
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 33/246 (13%)
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G NE ++S L P+ + + A + VA G NH V +G VY WG G
Sbjct: 279 GIVNERFVQNSIYSLV------PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGK 332
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----L 312
GRLG R D P+ VD V ++ G ++ G +Y WGK L
Sbjct: 333 CGRLGQRIDMDISSPKIVDSLSDIRV----KKVACGEYHTCALTDSGDVYTWGKDSCSDL 388
Query: 313 KNNG---DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHAQYGELGYGP 366
+ G W+ K + + G ++ + G H SSC ++G +G LG+G
Sbjct: 389 VDEGRIRSQWLTHKFSLPVEGISISSIACGEWH--TAIVSSCGRLFTYGDGTFGVLGHGN 446
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD--------RTNVGERLDQLDVYDGK 418
Y SS PK+V+ L+G+ V SVACG H+ I++ T+ G+ D +G+
Sbjct: 447 YHSFSS--PKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGR 504
Query: 419 ASSQDN 424
DN
Sbjct: 505 LGHADN 510
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 54/331 (16%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP +++ L G I ++AG H VA+ +G +TWG G+LG G R P ++
Sbjct: 77 SPVQVKGLNG--ITAISAGW--AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPIN 132
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L+ I AG +HT+ + DG ++G N++GQLG+G+ N P V + +
Sbjct: 133 GLTG--ITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSI 190
Query: 166 TACGA-------DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
++ G D TVW + G +GQLG+GT++ P
Sbjct: 191 SSGGGHSLVIKNDGTVW----------SWGCNNFGQLGNGTNSN--------------NP 226
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P I+ L G I+ V+ G H+ A+ S G V+ WG G L + + D ++P +
Sbjct: 227 TPHQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQA--- 281
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWN 332
N L I+AG SS G ++W G+L N D P + LSG
Sbjct: 282 ---NGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSG-- 336
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
+ +D+G + + D + ++G YG+L
Sbjct: 337 ITAIDTGATYTVALKTDGNIFAFGENTYGQL 367
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 38/345 (11%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
++A + +A+ +G ++WG N+ G LG G + P V L+ I AG
Sbjct: 37 YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLN--GITAISAGW 94
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+H V + DG +G G+LG G+ P+P+ L + +TA + G + T+ L +
Sbjct: 95 AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGL-TGITAISAGWNHTLALKA- 152
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ + G QYGQLG G NT +S++ L Q I ++ G
Sbjct: 153 -DGTLWSWGQNQYGQLGTG-----NTTNSNIPLQVPGQIG-----------ITSISSGGG 195
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H++ + + G V++WG +G+LG+ + P ++ N ++ +SAG ++S+
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQIS--GLNGIIN----VSAGVIHSTA 249
Query: 300 TAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
G ++ W G+L N N D P L+G + + +G + +D +
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWEFSSAIKSDGTFW 307
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
WG YG+LG G +S P +V L G+ I Y +L
Sbjct: 308 VWGVNDYGQLGNGSKSDVTS--PMQVSSLSGITAIDTGATYTVAL 350
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 44/293 (15%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG + T+ + DG ++G+N++G LG G+ N P V+ L + +TA + G V L
Sbjct: 42 AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL-NGITAISAGWAHFVAL 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S ++ G+ G+LG GT+ + P I L G I ++
Sbjct: 101 KS--DGTVWTWGVGYSGELGDGTN--------------SLRTTPAPINGLTG--ITAISA 142
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISA 292
G NHT+A+ + G +++WG YG+LG + +P +V P + IS+
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV----------PGQIGITSISS 192
Query: 293 GSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHF-VG 346
G +S G ++ WG NG + P P +SG N + + +G +H +
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTP-HQISGLNGIINVSAGVIHSTALK 251
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D + +WG GEL G + S +P + + L G +I++ G+ S I
Sbjct: 252 SDGTVWNWGCNFRGELANG--NKIDSYIPVQANGLNG--IIAITAGWEFSSAI 300
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V+ G T+A+ + G V++WGF G LG + P V V N + IS
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGI----TAIS 91
Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF- 344
AG + G ++ W G+L + + P P+ L+G + + +G H
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLA 149
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ AD + SWG QYG+LG G +S +P +V + + S++ G GHSLVI
Sbjct: 150 LKADGTLWSWGQNQYGQLGTG--NTTNSNIPLQVP--GQIGITSISSGGGHSLVI 200
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 162/386 (41%), Gaps = 42/386 (10%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H + + + + WG N GQLG G R PT L + + AG SH++ +T+
Sbjct: 80 SHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS--VAQVSAGESHSLALTD 137
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT--ATACGADFTVWLSSVEGASIL 185
DG A+G N GQLG G+ + P V+ L ++ T A G + ++ L+S +
Sbjct: 138 DGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS--DGRVF 195
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLG+ + T DSS+ + + P + VA G NH++A+
Sbjct: 196 AWGKNSSGQLGNNS-----TVDSSIPVQVQGLP----------ANVTAVAAGGNHSLALT 240
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
S G +Y WG G+LG + P V + P AV SAG +S G
Sbjct: 241 SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGS--KPVAV-SAGKDHSLALMQDGT 297
Query: 306 LYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
+Y WG NG P+ N+ + +G + +D +WG G
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSG 357
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVIS-----------VACGYGHSLVIVDRT-NVGER 408
+LG G +++ + + +L +++ +A G + ++D T VG
Sbjct: 358 QLGDGTTSNRNTPV-RVFSVLSTGALLTDLQLSDGSSNPIALSPGFTSTVMDYTATVGAG 416
Query: 409 LDQLDVYDGKASSQDNEEIDRNSTVP 434
++Q+ +Y A+S + NS P
Sbjct: 417 VNQVLLYAKPAASGVTMTLTVNSQSP 442
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 23/241 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I+ VAAG H +A+ +GR + WG+N GQLG+ + P V L + A
Sbjct: 175 IKVVAAG--GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA-NVTAVAA 231
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVW 175
G +H++ +T DG A+G N GQLG G+ N P V L S+ A + G D ++
Sbjct: 232 GGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLA 291
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L ++ ++ G YGQLG+GT A P + LA T V+
Sbjct: 292 L--MQDGTVYAWGGNSYGQLGNGTTT--------------ASEMPVQVTGLANVT--AVS 333
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G + ++A+ S GYVY WG G+LG + P RV L + +S GS
Sbjct: 334 AGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSS 393
Query: 296 N 296
N
Sbjct: 394 N 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKA 115
++ VAAG H +A+ +GR Y WG N GQLG G P +V+ L + K
Sbjct: 225 NVTAVAAG--GNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAV 282
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
AG+ H++ + +DG A+G N +GQLG+G+ P V L + VTA + G ++
Sbjct: 283 SAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGL-ANVTAVSAGGSDSLA 341
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
L+S + GL GQLG GT + NT
Sbjct: 342 LTS--DGYVYAWGLNSSGQLGDGTTSNRNT 369
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P IV LS + + AG
Sbjct: 125 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 184
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G N+ PS + L + V ACG T L+
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT- 243
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G +YGQLGH T NE RPR + L G + ++ACG
Sbjct: 244 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 287
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
HT+A V G V+++G G G+LG+ +++ +PR
Sbjct: 288 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + + +P + L GV + ++AG H +A+ + G
Sbjct: 139 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 194
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G +D P+ + L K++ G HT ++T+ G FG
Sbjct: 195 NVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDG 254
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V LV + VT ACG T+ S G + + G + GQLG
Sbjct: 255 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 313
Query: 197 HG 198
+G
Sbjct: 314 NG 315
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N GQLG G I + +S V
Sbjct: 119 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 178
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A ++ ++ + G GQLG G + YN KDS P I L
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYN-KDS-----------PSCIETL 224
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ + +ACG HT + G V+T+G G YG+LGH ++E PR V
Sbjct: 225 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R L + I+++ CG H++A+ G ++ WG G+LG R P V+
Sbjct: 114 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 170
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSG 330
N P ISAG +S + G +Y WG+ N D P + L
Sbjct: 171 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS---PSCIETLDD 226
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + S + ++G +YG+LG+ ++ P+ V L G V +
Sbjct: 227 QKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQI 284
Query: 390 ACGYGHSLVIVDRT 403
ACG H+L V T
Sbjct: 285 ACGRQHTLAYVSDT 298
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 156/379 (41%), Gaps = 46/379 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L + +D + +A G H V +G +TWG G+LG G +P
Sbjct: 263 DVLLPKPLESNIVLDAQHIACGVR--HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPR 320
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V L+ + G HT VT DG +G H G LG+G+ + P + ++
Sbjct: 321 LVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL 380
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V ACG T +SS + G +G LGHG ++Y
Sbjct: 381 EGLQVAYVACGPWHTALISST--GQLFTFGDGTFGVLGHGDKKS---------ISY---- 425
Query: 219 RPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHREQK 267
PR + +L G + VACG HT AV G ++TWG G RLGH +++
Sbjct: 426 -PREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKE 484
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
P V N I+ G + GQ++ ++G+L N D P
Sbjct: 485 PRLKPTCVPALIDYNF----HKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQP 540
Query: 323 KPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ D L G + + G H V + + +WG G LG+G + S P V+
Sbjct: 541 CLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKS--PTLVES 598
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ HV +ACG +S I
Sbjct: 599 LKDKHVKIIACGSNYSAAI 617
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 125/307 (40%), Gaps = 38/307 (12%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
G H+ +VT G +G G+LG G ++ +P V L + V ACG T +
Sbjct: 284 GVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAV 343
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ G+ G LG+GTD + P+ R L G + VAC
Sbjct: 344 TMDGELYTWGDGVHNAGLLGNGTDVSH------------WMPK-RISGILEGLQVAYVAC 390
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------VFQRNNVLPPEAV 289
G HT + S G ++T+G G +G LGH ++K PR VD + V AV
Sbjct: 391 GPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAV 450
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP-----LMDLSGWNLRCMDSGN 340
+ SS + G+L+ WG N GD KP L+D + + C S
Sbjct: 451 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSIT 510
Query: 341 MHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+G +S + G + YG+LG K + + D L G VACG H +V
Sbjct: 511 ----IGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVE--DKLLGESAEEVACGAYHVMV 564
Query: 399 IVDRTNV 405
+ + V
Sbjct: 565 LTSKNEV 571
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 158/379 (41%), Gaps = 50/379 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D+ +A C H V V +G ++WG +LGHG ++ P ++
Sbjct: 283 PKALESTVVLDVHSIA--CGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDA 340
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
L I+ G H+ VT G+ +G H G LG GS + P V +
Sbjct: 341 LCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMH 400
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V+ ACG T ++S + G +G LGHG + + PR
Sbjct: 401 VSYVACGPWHTAVVTS--AGQLFTFGDGTFGALGHGDHSSMSI--------------PRE 444
Query: 223 IAALAGETIVKVACGTNHTVAV---------------DSKGYVYTWGFGGYGRLGHREQK 267
+ AL G+ ++VACG HT AV S G ++TWG G GRLGH +++
Sbjct: 445 VEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKE 504
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
VP+ V + ++ G S G++Y ++G+L + D P
Sbjct: 505 PRLVPQSVTALINESFCQ----VACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIP 560
Query: 323 KPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ ++ + + G+ H + + + +WG G+LG+G +++ P VD
Sbjct: 561 TLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNT--PTLVDF 618
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ V +V CG + I
Sbjct: 619 LKDKQVKNVVCGLNFTAAI 637
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ +TWG ++G+LGHGDK R P V+ L + G + +V +T G G
Sbjct: 486 KLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSA 545
Query: 138 KHGQLGS----GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+GQLGS G I +E V EV ACG+ L+S + G G
Sbjct: 546 VYGQLGSPVADGKIPTLVEGKIANSFVEEV---ACGSYHVAVLTS--KTEVYTWGKGTNG 600
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV--- 250
QLGHG ++ NT P + L + + V CG N T A+ +V
Sbjct: 601 QLGHGDNDHRNT--------------PTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCA 646
Query: 251 -YTWGFGGYGRLGHREQK 267
++ G + + G R ++
Sbjct: 647 DHSICSGCHNQFGFRRKR 664
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 48/364 (13%)
Query: 73 VDVEGRCYTWGRNE-RGQLGHG---------DKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
D G + WG G +G G KI P + + G H
Sbjct: 245 FDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHA 304
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEG 181
V+VT+ G ++G +LG G + P + L + ACG + ++
Sbjct: 305 VLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGD 364
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNH 240
G G LGHG++ + P+ ++ + G + VACG H
Sbjct: 365 LYTWGDGTHNSGLLGHGSEASHWI--------------PKKVSGPMEGMHVSYVACGPWH 410
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-----------PPEAV 289
T V S G ++T+G G +G LGH + +PR V+ + + E +
Sbjct: 411 TAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELM 470
Query: 290 ISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG-NMH 342
I++ S SS ++ G+L+ W G+L + + + + P+ + L + + G N+
Sbjct: 471 IASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLS 530
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVD 401
+ + G A YG+LG P +P V+ + V VACG H V+
Sbjct: 531 VALTTSGRVYTMGSAVYGQLG-SPVAD--GKIPTLVEGKIANSFVEEVACGSYHVAVLTS 587
Query: 402 RTNV 405
+T V
Sbjct: 588 KTEV 591
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
C S H + + YTWG+ GQLGHGD R+ PT+V L ++K G + T
Sbjct: 575 VACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFT 634
Query: 123 VVVT 126
++
Sbjct: 635 AAIS 638
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-------RCYTWGRNERGQLGHGDKIQ 97
+ P ++ L DI+ A G H +A+ EG + Y+WG N +LG+G Q
Sbjct: 111 LYPKKVDALCEKDIKMFAYGS-GPHVLALTKEGEVRLYLRKVYSWGHNGYCELGNGTCNQ 169
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
PT V+ L +I G H+V + EDG A+G N GQ GS N+ P V
Sbjct: 170 GLYPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVN 229
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
++ +V ACG TV L +E + G GQLG G Y
Sbjct: 230 SNLAGKKVAQIACGQTSTVAL--LENGEVYGWGYNGVGQLGIGN--------------YV 273
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P I L G IVKVACG HT+A+ +G +Y WG YG+LG + + P
Sbjct: 274 NQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNKTNACNP--- 330
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAG-GGQLYMWGKLK 313
V ++ + + + ++S G GG++YMWG +
Sbjct: 331 -VLVKHEMGRVSDIAALHYNHTSVAVGEGGRVYMWGHCR 368
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG-------NS 131
Y G N G LG GD P V L + IK G H + +T++G
Sbjct: 92 YALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEGEVRLYLRKV 151
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLP 190
++G N + +LG+G+ + P+ V L + + ACG+ +V L+ E I G
Sbjct: 152 YSWGHNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALN--EDGEIYAWGQN 209
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGY 249
GQ G SS+ Q PR + + LAG+ + ++ACG TVA+ G
Sbjct: 210 NCGQAG-----------SSIT---TNQGVPRQVNSNLAGKKVAQIACGQTSTVALLENGE 255
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VY WG+ G G+LG ++ P R+ ++ ++ G V++ GQLY+W
Sbjct: 256 VYGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVK----VACGYVHTLALTDEGQLYVW 311
Query: 310 G 310
G
Sbjct: 312 G 312
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 127/325 (39%), Gaps = 80/325 (24%)
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L + I G G + ++VT D A G N G LG+G + + P V L ++
Sbjct: 65 LVLWLILHLGTGNLGNEALIVTRDKMVYALGSNIAGCLGTGDAHSTLYPKKVDALCEKDI 124
Query: 164 TATACGADFTVWLSSVEGA------SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
A G+ V + EG + + G Y +LG+GT N+
Sbjct: 125 KMFAYGSGPHVLALTKEGEVRLYLRKVYSWGHNGYCELGNGTCNQ--------------G 170
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + +L + IV +ACG++H+VA++ G +Y WG G+ G ++ VPR+V+
Sbjct: 171 LYPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVN- 229
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
N A I+ G ++ G++Y WG NG
Sbjct: 230 --SNLAGKKVAQIACGQTSTVALLENGEVYGWGY---NG--------------------- 263
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G Y + + P ++ L G ++ VACGY H+L
Sbjct: 264 ---------------------VGQLGIGNYVNQMT--PCRIGTLLGTVIVKVACGYVHTL 300
Query: 398 VIVDRTNVGERLDQLDVYDGKASSQ 422
+ D QL V+ G + Q
Sbjct: 301 ALTDE-------GQLYVWGGNSYGQ 318
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P V LS + + AG+
Sbjct: 152 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 211
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G E PS + L ++ V ACG T L++
Sbjct: 212 AHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTT 271
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ G +YGQLGH T NE RPR + LAG + ++ACG
Sbjct: 272 --DGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 314
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
HT+A V G V+++G G G+LG+ ++ +P + + N L E+ S +
Sbjct: 315 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSDKEL- 372
Query: 297 SSCTAGGGQ-LYMWGKLKN 314
AGG Q + +W + KN
Sbjct: 373 -VMIAGGNQSVLLWMEKKN 390
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G L ++ +P + L GV + ++AG H +A+ + G
Sbjct: 166 KGGELFAWGQNLHGQLG--VGRLFASIPTPQAVEHLSGVPLVQISAG--KAHSMALSMSG 221
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G D P+++ L +++ G SHT ++T DG FG
Sbjct: 222 NVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAG 281
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V L + VT ACG T+ S G + + G + GQLG
Sbjct: 282 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 340
Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
+ GT N+ S+ +L +E++ + + +AG
Sbjct: 341 NGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 377
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
RP V K KI G H ++++ DG + ++ IE + +C+
Sbjct: 99 RPACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS-------------IEHARFQCI 145
Query: 160 VSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
+ E + ACG ++ LS +G + G +GQLG G + +
Sbjct: 146 LQEKSIIQIACGDYHSLALS--KGGELFAWGQNLHGQLGVGR-------------LFASI 190
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P P+A+ L+G +V+++ G H++A+ G VY+WG G+LG E P ++
Sbjct: 191 PTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIET 250
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
V ++ G +++ G ++ +G K N+ + + P+ + +L+G
Sbjct: 251 LDNQQV----EFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN 306
Query: 332 NLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+ + G H +V S+G + G+LG G + +P K+
Sbjct: 307 RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 355
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R L ++I+++ACG H++A+ G ++ WG +G+LG +P V
Sbjct: 141 RFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHL 199
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWN 332
+ V P ISAG +S + G +Y WG+ +G+D +P + L
Sbjct: 200 SGV--PLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FPSLIETLDNQQ 255
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H + D ++G +YG+LG+ ++ P+ V L G V +AC
Sbjct: 256 VEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQIAC 313
Query: 392 GYGHSLVIV 400
G H+L V
Sbjct: 314 GRRHTLAYV 322
>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 992
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 31/246 (12%)
Query: 48 TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL ++ R + C H +A+ +G+ + WG N GQLG ++ P +
Sbjct: 104 TVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ 163
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + + AG +H+ V++ G + FGW N GQLG G ++ P+ V+ L +
Sbjct: 164 SLCEIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK 221
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 222 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 265
Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
IA L G + +V CG +HT+ +S +Y++G G G+LG+ EQ + VP V
Sbjct: 266 IAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPV------ 319
Query: 282 NVLPPE 287
+LP E
Sbjct: 320 -LLPTE 324
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L G +G RK SP L+ L + + ++AG H + + G
Sbjct: 134 GQLFVWGENTHGQLGLRKE--QAGTQSPQHLQSLCEIPVAQISAG--GNHSFVLSLSGVV 189
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N GQLG GD R PTIV L K G HT +++ G FG
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 249
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S+++E P + L S+V+ CG T+ I + G GQLG+G
Sbjct: 250 GQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEE-SSKLIYSFGCGMQGQLGNG 308
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDSK 247
VK ++ P P + E T+ K+ G +H+ A+ K
Sbjct: 309 ---------EQVK---QSVPLPVLLPTECTEFTMEKLITGEHHSFALFFK 346
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 93 GDKIQRDRPTI---VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
G + D+ T+ + L ++ + G H++ ++ DG +G N HGQLG +R
Sbjct: 95 GKVLIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLG---LRK 151
Query: 150 EI----EPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
E P ++ L V++++A F + LS V + G GQLG G
Sbjct: 152 EQAGTQSPQHLQSLCEIPVAQISAGG-NHSFVLSLSGV----VFGWGSNSAGQLGLG--- 203
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+TKD V P + +L G+ V ++CG HT + G V+T+G GG+G+L
Sbjct: 204 --DTKDRFV---------PTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQL 252
Query: 262 GHREQKDEWVPRRV 275
GH KDE PR +
Sbjct: 253 GHNSLKDEHHPRLI 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 16/188 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R + +L ++++ACG H++A+ + G ++ WG +G+LG R EQ P+ +
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC 166
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
P A ISAG +S + G ++ WG L + D ++ P + L G
Sbjct: 167 E----IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV-PTIVKSLCGKK 221
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ G H + + ++G +G+LG+ K P+ + L G V V C
Sbjct: 222 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLIAELWGSKVSQVTC 279
Query: 392 GYGHSLVI 399
G H+LV
Sbjct: 280 GRHHTLVF 287
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4028 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4084
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4085 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4203
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4204 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4250 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4305
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4306 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4339
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3980 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4036
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4095
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4096 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4141
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4167
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4168 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4211
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4212 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4239
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ +S G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----VSIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4267 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4324
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4325 LQGKNVRQISAGRCHSAAWT 4344
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG G + P + L+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ ++G NKHGQLG G ++++ P ++ L + + A GA F +
Sbjct: 147 YHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RFVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG I+ P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G ++GQLG G + ++Q P+ I +L G ++VA G H
Sbjct: 155 GSEVFSWGQNKHGQLGLGFE-------------LKSQSAPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + + I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKI----VYICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +K+ PR I +L IV++ACG H++A+ V++WG +
Sbjct: 120 GTEEY------IKV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGFELKSQSAPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 APQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 292
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 142/354 (40%), Gaps = 102/354 (28%)
Query: 80 YTWGRNERGQLGHGDK----------IQRDRPTIVSELS--------------------- 108
++WG GQLGH D+ R +P+++ +
Sbjct: 3 FSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGESGRLGLGNENCCNIPKRI 62
Query: 109 --KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
K K+ G H+ V TE L +G G+LG+G + +P V++++
Sbjct: 63 NIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQPVLPEHKVAQIS-- 120
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
CG+D+T L+ + G+ YG+LGHG D+ Q P+ + L
Sbjct: 121 -CGSDWTAVLTLA--GKVFTFGVGSYGKLGHGNDSN--------------QLVPKLVEEL 163
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
E +V ++CG +H A++ +G V+TWG GG GRLGH ++D P V V N ++
Sbjct: 164 DTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKP--VLVKGMNGLVA- 220
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
+ G + T G+LYMW GWN+
Sbjct: 221 -LTVECGGYHMGVTTLDGELYMW--------------------GWNV------------- 246
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
YG+ G G + ++ P V+ L G V+ VACG H++ +V
Sbjct: 247 ------------YGQCGLGLH-VENQLTPVLVEQLRGKRVLMVACGESHTMALV 287
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
+ + + V C H TWG G+LG GD+I R +P L ++K+
Sbjct: 62 INIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQPV----LPEHKVA 117
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
+ G T V+T G FG +G+LG G+ N++ P V L +E V + +CGAD
Sbjct: 118 QISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADH 177
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L ++EG + G G+LGHG++ +DS +P + + G +
Sbjct: 178 MAAL-NIEG-DVFTWGCGGNGRLGHGSE-----RDSK---------KPVLVKGMNGLVAL 221
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVL 284
V CG H G +Y WG+ YG+ G +++ P V+ + VL
Sbjct: 222 TVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRGKRVL 274
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ + G+ +T+G G+LGHG+ + P +V EL ++ G H + +G+
Sbjct: 128 VLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDV 187
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G +G+LG GS R+ +P V+ + V T + + +++++G + G
Sbjct: 188 FTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYHMGVTTLDG-ELYMWGWNV 246
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
YGQ G G L E Q P + L G+ ++ VACG +HT+A+ S
Sbjct: 247 YGQCGLG-------------LHVENQLTPVLVEQLRGKRVLMVACGESHTMALVS 288
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R V+ C + H A+++EG +TWG G+LGHG + +P +V ++ G
Sbjct: 167 RVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECG 226
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
H V T DG +GWN +GQ G G + N++ P V L + V ACG T+ L
Sbjct: 227 GYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMAL 286
Query: 177 SS 178
S
Sbjct: 287 VS 288
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
SP + L GV I V A HC+AVD +GR Y WG NE GQ G + ++
Sbjct: 87 SPAPVDALAGVSI--VQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALR 144
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
RD P K K+++ AG +H+VV+T+DG+ +G W G I+ P
Sbjct: 145 RDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP------GDIKQISTPVR 198
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
V+ L V A GA L+ E + G +YGQLG G +
Sbjct: 199 VQGL-ENVKVIAVGAFHN--LALTEDGILWAWGNNEYGQLGTG----------------D 239
Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
QPR P + L+ ++V +A G H+ A+ +G VY WG G +GRLG + K VP
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
++V++ +++ +S G +S G+++ +G+
Sbjct: 300 QKVELLAGEDIIQ----VSCGGTHSVALTRDGRMFSYGR 334
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 38/343 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A + WG E GQLG G + D V+ L + AG +++ + DG
Sbjct: 6 AFSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRL 65
Query: 132 LAFGWNKHGQLG-SGSIRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAG 188
+GWN+ G LG + E P+PV L VS V A G L+ + G
Sbjct: 66 FTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHC---LAVDDKGRAYAWG 122
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+YGQ G E K+ + P P+ A + +VA G H+V + G
Sbjct: 123 GNEYGQCG----EEAERKEDGTRALRRDIPIPQRCAPKL--KVRQVAAGGTHSVVLTQDG 176
Query: 249 YVYTWGFGGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
+V+TWG W P +++ R L VI+ G+ ++ G
Sbjct: 177 HVWTWG-------------QPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGI 223
Query: 306 LYMWGKLK----NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
L+ WG + GD +P+ LS +L + +G H + + +WG +
Sbjct: 224 LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGE 283
Query: 359 YGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
+G LG+G KSS M P+KV++L G +I V+CG HS+ +
Sbjct: 284 HGRLGFG--DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 164/384 (42%), Gaps = 58/384 (15%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYK 111
L + + V AG S + +A+ +GR +TWG N+RG LGH + + + P V L+
Sbjct: 41 LDALAVSAVVAG--SRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------SGSIRNEIEPSPVRCLVS- 161
I +A G H + V + G + A+G N++GQ G + ++R +I P P RC
Sbjct: 99 IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDI-PIPQRCAPKL 157
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V A G +V L+ + + G P G + +T P
Sbjct: 158 KVRQVAAGGTHSVVLT--QDGHVWTWGQP----WPPGDIKQIST--------------PV 197
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ L E + +A G H +A+ G ++ WG YG+LG + + P RV+
Sbjct: 198 RVQGL--ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDL 255
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSGWNLR 334
+++ I+AG +S+ G++Y WG+ ++ GDD M P+ + L+G ++
Sbjct: 256 SLVD----IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII 311
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG---------- 383
+ G H + D S+G +G LGYG M +D+
Sbjct: 312 QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQ 371
Query: 384 MHVISVACGYGHSLVIVDRTNVGE 407
VACG H+L I T E
Sbjct: 372 WQARYVACGGRHTLAIATWTEADE 395
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLP 190
LA+G + GQLG G E V L V+A G+ + L+ + G
Sbjct: 14 LAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNS--LAICADGRLFTWGWN 71
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
Q G LGH + + E+ P P + ALAG +IV+ A G H +AVD KG
Sbjct: 72 QRGTLGHPPETKT-----------ESSPAP--VDALAGVSIVQAAIGGWHCLAVDDKGRA 118
Query: 251 YTWGFGGYGRLGHREQKDEWVPR--RVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
Y WG YG+ G ++ E R R D+ P V ++AG +S G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHV 178
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+ WG+ GD P+ N++ + G H+ + D +WG+ +YG+LG G
Sbjct: 179 WTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+S P +V+ L + ++ +A G HS + V
Sbjct: 239 DTQPRSQ--PIRVEGLSDLSLVDIAAGGWHSTALTKEGEV 276
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +P R++ L V + V A H +A+ +G + WG NE GQLG GD R +P
Sbjct: 192 QISTPVRVQGLENVKVIAVGA----FHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPI 247
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
V LS + AG H+ +T++G A+G +HG+LG G + + + P V L
Sbjct: 248 RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAG 307
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E + +CG +V L+ + + G +G+LG+G T +++ + P
Sbjct: 308 EDIIQVSCGGTHSVALT--RDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPG 362
Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
+ G+ + VACG HT+A+
Sbjct: 363 TSGGDSGGQWQARYVACGGRHTLAI 387
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG 188
L +G +GQLG G I EI P +C V CG TV+L ++ ++ G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFL--LDDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +++ +P + AL + IV V+CG +HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KSRKKPEHVVALDAQIIVAVSCGESHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V++WG G G+LG ++ VPR + + A ++ G +S + GGQ++
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQI----AQVACGYWHSHALSKGGQVF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG+ L +G P+ + L G + +G H F + + WG ++
Sbjct: 160 SWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG K P + L VI V+CG H+
Sbjct: 220 GQLGLN--DTKDRWFPALLKSLRSQRVIFVSCGEDHT 254
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R GC H V + +G YT G N+ GQLGH R +P V L I G
Sbjct: 35 RVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS--RKKPEHVVALDAQIIVAVSCG 92
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWL 176
SHT+ + + G ++G +GQLG + + P ++CL ++ ACG + L
Sbjct: 93 ESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL 152
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S +G + + G Q+GQLG G SS+ P+ I +L G +++
Sbjct: 153 S--KGGQVFSWGQNQFGQLGLGMHG------SSIS-------TPQIIQSLQGIPFAQLSA 197
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
G H+ A+ G V+ WG +G+LG + KD W P + + V+
Sbjct: 198 GGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVI 245
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ ++WG GQLG + + R P + LS +I + G
Sbjct: 87 VAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL--VSEVTATACGA-DFTVW 175
H+ +++ G ++G N+ GQLG G + I P ++ L + +A GA F +
Sbjct: 147 WHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS ++ G ++GQLG +TKD P + +L + ++ V+
Sbjct: 207 LS----GAVFGWGKNKFGQLGLN-----DTKDRWF---------PALLKSLRSQRVIFVS 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV 288
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 136/323 (42%), Gaps = 36/323 (11%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P ++ G G HTV + +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEHVVALDAQIIVAVSCGESHTLALN--DKGQVFSWGLGSNGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N + V++ PR I L+ I +VACG H+ A+ G V++WG +
Sbjct: 118 ----LNNFEECVRV-------PRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQF 166
Query: 259 GRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
G+LG P+ + Q P A +SAG +S G ++ WGK
Sbjct: 167 GQLGLGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQL 222
Query: 312 -LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
L + D W +P L L + + G H + ++G YG+LG+
Sbjct: 223 GLNDTKDRW-FPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNH 281
Query: 370 KSSAMPKKVDILEGMHVISVACG 392
+ + P+KV L G V ++CG
Sbjct: 282 EIN--PRKVFELMGNVVTQISCG 302
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGG++ G + +G G ++ +P ++ L G+ ++AG H A+ + G
Sbjct: 154 KGGQVFSWGQNQFGQLGL--GMHGSSISTPQIIQSLQGIPFAQLSAG--GAHSFAITLSG 209
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WG+N+ GQLG D R P ++ L ++ G HT +T+ FG
Sbjct: 210 AVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG 269
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
+GQLG +EI P V L+ + VT +CG+ T WL
Sbjct: 270 GYGQLGHNCTNHEINPRKVFELMGNVVTQISCGS--TRWL 307
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K + G V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLD 51
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG G + P + L+ +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ ++G NKHGQLG G ++++ P ++ L + + A GA F +
Sbjct: 147 YHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RFVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG I+ P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G+ + + G ++GQLG G + ++Q P+ I +L G ++VA G H
Sbjct: 155 GSEVFSWGQNKHGQLGLGFE-------------LKSQSAPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + + I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKI----VYICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +K+ PR I +L IV++ACG H++A+ V++WG +
Sbjct: 120 GTEEY------IKV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGFELKSQSAPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 APQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 158/376 (42%), Gaps = 47/376 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 303 PKALESAVVLDVQNIA--CGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDS 360
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
LS I+ G HT VT G+ +G + G LG G+ + P V +
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 420
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V++ +CG T ++S + G +G LGHG +TK S +PR
Sbjct: 421 VSSISCGPWHTAVVTS--SGQLFTFGDGTFGVLGHG-----DTKSVS---------KPRE 464
Query: 223 IAALAGETIVKVACGTNHTVAVD------------SKGYVYTWGFGGYGRLGHREQKDEW 270
+ +L G V ACG HT AV S G ++TWG G GRLGH +++ +
Sbjct: 465 VESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 524
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
VP V V P ++ G + G +Y ++G+L N D P +
Sbjct: 525 VPTCVAAL----VDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRV 580
Query: 326 M-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L+ + + G H + + + +WG G LG+G ++S P V+ L+
Sbjct: 581 EGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS--PTLVEALKD 638
Query: 384 MHVISVACGYGHSLVI 399
V S+ACG + I
Sbjct: 639 KQVKSIACGTNFTATI 654
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P R+ PL G+ + ++ C H V G+ +T+G G LGHGD
Sbjct: 401 GNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKS 458
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
+P V L ++ + G HT V E G +G G+LG G
Sbjct: 459 VSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHG 518
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEY 203
++ P+ V LV ACG TV L++ + G P YGQLG+ D +
Sbjct: 519 DKEAKLVPTCVAALVDPNFCRVACGHSLTVALTT--SGHVYTMGSPVYGQLGNPQADGKL 576
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
T R LA + ++ACG H + S+ VYTWG G GRLGH
Sbjct: 577 PT---------------RVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGH 621
Query: 264 REQKDEWVPRRVDVFQRNNV 283
+ D P V+ + V
Sbjct: 622 GDTDDRNSPTLVEALKDKQV 641
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G +++WG GRLGH D P+ +D
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 363 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 418
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V S ++G +G LG+G KS + P++V+ L+G +
Sbjct: 419 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVIS 476
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 477 ACGVWHTAAVVE 488
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 129/332 (38%), Gaps = 37/332 (11%)
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G K+ P + ++ G H +VT+ G ++G G+LG G + +
Sbjct: 295 GMKMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLH 354
Query: 153 PSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + L + + ACG T ++ G +G LGHG + +
Sbjct: 355 PKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV------ 408
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P+ R L G + ++CG HT V S G ++T+G G +G LGH + K
Sbjct: 409 ------PK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSK 461
Query: 272 PRRVD-------VFQRNNVLPPEAVISAGSVN-SSCTAGGGQLYMWGK----LKNNGDDW 319
PR V+ V V AV+ N SS G+L+ WG +GD
Sbjct: 462 PREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKE 521
Query: 320 MYPKP-----LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
P L+D + + C S + + + G YG+LG P Q +
Sbjct: 522 AKLVPTCVAALVDPNFCRVACGHSLTVA--LTTSGHVYTMGSPVYGQLG-NP--QADGKL 576
Query: 375 PKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
P +V+ L V +ACG H V+ RT V
Sbjct: 577 PTRVEGKLAKSFVEEIACGAYHVAVLTSRTEV 608
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G + GS + +G + DG L PTR+ L + +A C + H +
Sbjct: 554 GHVYTMGSPVYGQLGNPQA--DGKL--PTRVEGKLAKSFVEEIA--CGAYHVAVLTSRTE 607
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
YTWG+ G+LGHGD R+ PT+V L ++K G + T +
Sbjct: 608 VYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 654
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 140/332 (42%), Gaps = 31/332 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV--TEDGNSLAFGWN 137
YTWG G LGHG+ I P +V L Y IK+ G HTV EDG ++G
Sbjct: 2 YTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGL-HTVFALNAEDGKVYSWGLG 60
Query: 138 KHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA-SILNAGLPQYGQL 195
K+G LG G++R+ P + S V +C ++SV S+ + G QL
Sbjct: 61 KYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQL 120
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G Y P+ + L E I+KVACG H+ A+ +KG ++ WG
Sbjct: 121 GVGDTEPY--------------AEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGL 166
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---- 311
G G+LG P + + ++ + ++ G +++ GG +Y +G
Sbjct: 167 GDDGQLGLGNYNLSTEPTILHIGEKKAKVMD---VACGDLHTCILTVGGLVYAFGSNIYG 223
Query: 312 --LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYG 368
+ + + P + + + G+ H + + +WG G LG G
Sbjct: 224 QIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCK 283
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
Q+SS P +V+ + +ACG H+ ++
Sbjct: 284 QRSS--PTEVEGFRDKKIGRIACGSKHTAALI 313
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 105/250 (42%), Gaps = 26/250 (10%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCH------CVAVDVEGRCYTWGRNERGQLGHGDK 95
GNL S R PL + +SCH +V G Y++G N QLG GD
Sbjct: 68 GNLRS--RFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDT 125
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
P +V+ L+ I K G+ H+ ++ GN +G GQLG G+ EP+
Sbjct: 126 EPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTI 185
Query: 156 VRC--LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ ++V ACG T L+ G + G YGQ+ + N+++
Sbjct: 186 LHIGEKKAKVMDVACGDLHTCILTV--GGLVYAFGSNIYGQIAAPSMNKFHL-------- 235
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P I+ + V V+CG+ H+ A+ G +Y WG GRLG + K P
Sbjct: 236 ------PYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPT 289
Query: 274 RVDVFQRNNV 283
V+ F+ +
Sbjct: 290 EVEGFRDKKI 299
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 112/274 (40%), Gaps = 24/274 (8%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ SP + L+ +I+ +A G + + + +G+ Y+WG + G LG G+ R
Sbjct: 17 DIDIPSPRVVEALLAYNIKRLACGLHTVFALNAE-DGKVYSWGLGKYGILGQGNLRSRFA 75
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTE---DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P ++ + H VT G+ +FG N + QLG G EP V
Sbjct: 76 PLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVT 135
Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L E + ACG + LS+ ++ GL GQLG G N
Sbjct: 136 VLNDENIIKVACGKYHSAALSA--KGNLFLWGLGDDGQLGLGNYN------------LST 181
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
+P I + ++ VACG HT + G VY +G YG++ +P R+
Sbjct: 182 EPTILHIGEKKAK-VMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRIS 240
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
N +S GS +S+ G+LY WG
Sbjct: 241 F----NTSKRFVSVSCGSFHSAAITENGKLYAWG 270
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 76/269 (28%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK-GYVY 251
G LGHG D + P PR + AL I ++ACG + A++++ G VY
Sbjct: 10 GALGHGEDIDI--------------PSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVY 55
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-VISAGSVNSSCTAGGGQLYMWG 310
+WG G YG LG + + P ++ F+ +NV+ + A +V S G +Y +G
Sbjct: 56 SWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTS--VTNTGSVYSFG 113
Query: 311 KLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
N+ GD Y +P + L+ N+ + G H + A + WG G+LG
Sbjct: 114 DNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG 173
Query: 364 YGPY-----------GQKSSA--------------------------------------- 373
G Y G+K +
Sbjct: 174 LGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKF 233
Query: 374 -MPKKVDILEGMHVISVACGYGHSLVIVD 401
+P ++ +SV+CG HS I +
Sbjct: 234 HLPYRISFNTSKRFVSVSCGSFHSAAITE 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 32/67 (47%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
RFV+ C S H A+ G+ Y WG G+LG GD QR PT V KI + G
Sbjct: 246 RFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACG 305
Query: 119 RSHTVVV 125
HT +
Sbjct: 306 SKHTAAL 312
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG G G LGH E D PR V+ N+ + + + A G++Y W
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNI---KRLACGLHTVFALNAEDGKVYSW 57
Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGHAQY 359
G K N P + N+ + +H V S S+G
Sbjct: 58 GLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117
Query: 360 GELGYG---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+LG G PY + P+ V +L ++I VACG HS + + N+
Sbjct: 118 SQLGVGDTEPYAE-----PQLVTVLNDENIIKVACGKYHSAALSAKGNL 161
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 306 LYMWGKLKN----NGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFV--GADSSCISWGHA 357
+Y WG N +G+D P P + L +N++ + G F D SWG
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG 406
+YG LG G +S P K+ + +VI ++C H+ + TN G
Sbjct: 61 KYGILGQG--NLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTG 107
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 172/419 (41%), Gaps = 98/419 (23%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GA NL P ++ L GV I VA G + +A+ +G + WG N GQLG G Q
Sbjct: 172 GATRSNL--PVQVPGLSGV-IAVVAGGY---YSLALRSDGTVWAWGDNRYGQLGDGTTTQ 225
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R P V LS + AG HTV + DG+ A+G+N +GQLG G+ + + PV+
Sbjct: 226 RAVPVQVLNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQ--PVQ 281
Query: 158 CLVSEVTATACG--------ADFTVWL----------------------SSVEGASILNA 187
+S+V G +D VW S + G L A
Sbjct: 282 VGLSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQSGLSGGVTLVA 341
Query: 188 GLPQ-----------------YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
G +GQLG GT +N + S+VK+++ + R
Sbjct: 342 GYKHSLVLRSDGTVWSWGDNVFGQLGDGT---FNPRSSAVKVSWLSLGRA---------- 388
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV---------FQRN 281
V+ G H+V +DS G V+ WG G+LG+ D V V + F+
Sbjct: 389 --DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHT 446
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
VL + + A VN G G L D P + LSG + + +G+
Sbjct: 447 LVLKADTTVWAWGVNEHGQLGDGTL----------TDRTRPVQVAGLSG--VSAVSAGSY 494
Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H + ++ + +WG +YG+LG G P +V L G V++VA G HSL +
Sbjct: 495 HSLALRSNGTVWAWGFNRYGQLGDGT--NTDRLQPVQVAGLSG--VVAVAAGDSHSLAL 549
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 154/338 (45%), Gaps = 42/338 (12%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V V +G + WG N +GQLG G + P V+ LS + +G H++ ++ D
Sbjct: 47 HSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS--GVVSVASGDYHSLGLSSD 104
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGASILNA 187
G A+G N GQLG+G+ P PVR V ++ + G+ F+ L+ ++
Sbjct: 105 GTVWAWGDNTAGQLGNGTA--SASPVPVR--VQNLSGVVSLGSGFSHGLALRSDGTVWAW 160
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G +Y QLG+ N P + L+G ++ V G +++A+ S
Sbjct: 161 GDNRYNQLGNVGATRSNL--------------PVQVPGLSG--VIAVVAGGYYSLALRSD 204
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+ WG YG+LG VP V V + V+ +SAGS ++ G ++
Sbjct: 205 GTVWAWGDNRYGQLGDGTTTQRAVP--VQVLNLSGVMN----LSAGSFHTVALRSDGSVW 258
Query: 308 MW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
W G+L + + + LS ++ + +GN H V +D + +WG +Y +
Sbjct: 259 AWGFNAYGQLGDGTTTSRFQPVQVGLS--DVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQ 316
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G SS +P + + G +++ GY HSLV+
Sbjct: 317 LGDGT--TTSSRVPVQSGLSGG---VTLVAGYKHSLVL 349
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 114/270 (42%), Gaps = 41/270 (15%)
Query: 41 DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
DG L TR + G+ + V+AG S H +A+ G + WG N GQLG G R
Sbjct: 468 DGTLTDRTRPVQVAGLSGVSAVSAG--SYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRL 525
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
+P V+ LS + AG SH++ + DG A+G+N GQ+G GS P V L
Sbjct: 526 QPVQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWRFLPVQVVGL 583
Query: 160 VSEVTATACG-------ADFTVWLSSVEGASILN--------------AGLPQYGQLGHG 198
V+ +A G +D TVW G+ L AGL LG G
Sbjct: 584 SGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLSGVVSLGSG 643
Query: 199 TDNEYNTKDSSVKLAYEA-------------QPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ + A+ + P ++ L+G +V V G H++A
Sbjct: 644 NYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSGLSG--VVSVVAGDYHSLARR 701
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
S G V+ WG+ G G+LG + D VP V
Sbjct: 702 SDGTVWAWGYNGEGQLGDGTRNDTLVPVWV 731
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 148/360 (41%), Gaps = 80/360 (22%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
G L + T L LV + + VS H + + + + WG NE GQLG G R
Sbjct: 415 GQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDR 474
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
RP V+ LS + AG H++ + +G A+G+N++GQLG G+ + ++P V
Sbjct: 475 TRPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAG 532
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
L S V A A G ++ L S ++ G GQ+G G+ Y +
Sbjct: 533 L-SGVVAVAAGDSHSLALRS--DGTVWAWGYNFDGQIGDGS--------------YSWRF 575
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P + + +V V+ G H++A+ S G V+TWG+ G G+LG
Sbjct: 576 LP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA----------- 622
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ P V AG LSG + + S
Sbjct: 623 ----INKPAPVQVAG----------------------------------LSG--VVSLGS 642
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
GN H + +D + +WG G+LG G +S+ P +V L G V+SV G HSL
Sbjct: 643 GNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRST--PVRVSGLSG--VVSVVAGDYHSL 698
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 44/365 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L GV V+ G H +A+ +G + WG N QLG+ + + P V
Sbjct: 129 PVRVQNLSGV----VSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPG 184
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
LS + AG +++ + DG A+G N++GQLG G+ P V L S V
Sbjct: 185 LS--GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL-SGVMNL 241
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+ G+ TV L S S+ G YGQLG GT QP ++
Sbjct: 242 SAGSFHTVALRS--DGSVWAWGFNAYGQLGDGTTTS------------RFQPVQVGLS-- 285
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
++ + G H++AV S G V+ WG Y +LG VP + + L
Sbjct: 286 ---DVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ-------SGLSG 335
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMYPK-PLMDLSGWNLRCMD--SGNM 341
+ AG +S G ++ WG GD P+ + +S +L D SG +
Sbjct: 336 GVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVSWLSLGRADVSSGQL 395
Query: 342 HHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H V ++ + +WG G+LG G A P + ++V+ G+ H+LV+
Sbjct: 396 HSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLG-----GSVAVSAGFKHTLVLK 450
Query: 401 DRTNV 405
T V
Sbjct: 451 ADTTV 455
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 41/290 (14%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G+ H+V V DG A+G+N+ GQLG G++ + P+PVR +S V + A G ++ L
Sbjct: 44 GQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD--SPTPVRVTNLSGVVSVASGDYHSLGL 101
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
SS ++ G GQLG+GT A P P + L+G +V +
Sbjct: 102 SS--DGTVWAWGDNTAGQLGNGTA--------------SASPVPVRVQNLSG--VVSLGS 143
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G +H +A+ S G V+ WG Y +LG+ +P +V L + AG
Sbjct: 144 GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVP------GLSGVIAVVAGGYY 197
Query: 297 SSCTAGGGQLYMWG--KLKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
S G ++ WG + GD P +++LSG + + +G+ H + +D
Sbjct: 198 SLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLSG--VMNLSAGSFHTVALRSDG 255
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S +WG YG+LG G S P +V + + V+++ G HSL +
Sbjct: 256 SVWAWGFNAYGQLGDGT--TTSRFQPVQVGLSD---VLTLVAGNYHSLAV 300
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++A G H+V V S G V+ WGF G+LG D P RV L +++
Sbjct: 40 RLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRV------TNLSGVVSVAS 93
Query: 293 GSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHF-V 345
G +S + G ++ WG NG P P + +LSG + + SG H +
Sbjct: 94 GDYHSLGLSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNLSG--VVSLGSGFSHGLAL 151
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+D + +WG +Y +L G G S +P +V L G VI+V G +SL +
Sbjct: 152 RSDGTVWAWGDNRYNQL--GNVGATRSNLPVQVPGLSG--VIAVVAGGYYSLAL 201
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 99.0 bits (245), Expect = 6e-18, Method: Composition-based stats.
Identities = 77/245 (31%), Positives = 115/245 (46%), Gaps = 21/245 (8%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
++I ++ C CH +AV G Y WG ++ GQLG G +Q P +++ L++ I A
Sbjct: 869 MEIEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDA 927
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTV 174
AG+ H+V +T DG +GW HGQLG G+ ++ P+ V L+ V G T+
Sbjct: 928 VAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTL 987
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
LS+ EG I G +GQLG G N SSV I E I+ +
Sbjct: 988 ALST-EGI-IYAFGCNIFGQLGVG-----NNIKSSV-----------PIKVSLSERIILI 1029
Query: 235 ACGTNHTVAVDSKGYVYTWGFG-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
A G H +AV +Y WG RL + QK + + D+ Q N+ E V +
Sbjct: 1030 ATGYFHNLAVSCTNKLYIWGASPQVLRLQAQTQKRTRILEQRDIKQLENIDEFEKVADST 1089
Query: 294 SVNSS 298
++N +
Sbjct: 1090 NMNDT 1094
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVS--ELSKYKIKKAGAGRSH 121
C VA+ G YTWG + +G LG G + R P ++S + + ++ G H
Sbjct: 823 CAGFSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISFFWIMEIEVLSVSCGHCH 882
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF-TVWLSSVE 180
T+ VT +G A+G ++ GQLG G I P + L EV A + +V L+S
Sbjct: 883 TLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHSVALTS-- 939
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ G +GQLGHG ++ T P + +L G I + G H
Sbjct: 940 DGRVFTWGWGVHGQLGHGNTDKKMT--------------PTLVTSLLGIVIRFITAGHAH 985
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T+A+ ++G +Y +G +G+LG VP +V + +R +I+ G ++
Sbjct: 986 TLALSTEGIIYAFGCNIFGQLGVGNNIKSSVPIKVSLSER------IILIATGYFHNLAV 1039
Query: 301 AGGGQLYMWG 310
+ +LY+WG
Sbjct: 1040 SCTNKLYIWG 1049
Score = 52.0 bits (123), Expect = 8e-04, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 28/246 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++PT + L+G+ IRF+ AG H +A+ EG Y +G N GQLG G+ I+ P V
Sbjct: 963 MTPTLVTSLLGIVIRFITAG--HAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSVPIKV 1020
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL----GSGSIRNEI-EPSPVRCL 159
S LS+ +I G H + V+ N L + W Q+ R I E ++ L
Sbjct: 1021 S-LSE-RIILIATGYFHNLAVSCT-NKL-YIWGASPQVLRLQAQTQKRTRILEQRDIKQL 1076
Query: 160 --VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK--------DSS 209
+ E A + ++ + N + Q G + E K + +
Sbjct: 1077 ENIDEFEKVADSTN----MNDTNEEVLENDAQNKNAQAKSGINTESRRKQLDNVCLRNVN 1132
Query: 210 VKLAYEAQP--RPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
V E Q +P + +L I++++ G +H V G +YTWG G++G+ +
Sbjct: 1133 VGSLEETQTHLKPTIVDTSLVKGNIIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSR 1192
Query: 267 KDEWVP 272
++ +P
Sbjct: 1193 REVPIP 1198
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 100 RPTIV-SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+PTIV + L K I + G H +VT+DG+ +G N GQ+G+GS R P+P+ C
Sbjct: 1144 KPTIVDTSLVKGNIIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIPTPL-C 1202
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ E I ++ + NE ++++ E++
Sbjct: 1203 YNPVSIFAQVPPRHNAYKRVGEEQEIDDSIKNITSEKNGNVHNEIKSENN------ESRE 1256
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+ AI G V CG ++T+A+ G V WG +LG KD
Sbjct: 1257 KINAIIKTVG-----VYCGYDYTIAIQPGGTVLAWGNNSRAQLGRLPAKD 1301
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4035 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4091
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4092 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4210
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4211 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4257 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4312
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4313 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4346
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3987 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4043
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4102
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4103 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4148
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4174
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4175 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4218
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4219 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4246
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ +S G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----VSIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4274 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4331
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4332 LQGKNVRQISAGRCHSAAWT 4351
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4036 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4092
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4093 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4211
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4212 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4258 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4313
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4314 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4347
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3988 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4044
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4103
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4104 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4149
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4175
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4176 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4219
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4220 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ +S G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----VSIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4275 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4333 LQGKNVRQISAGRCHSAAWT 4352
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + + +P + L GV + ++AG H +A+ V G
Sbjct: 53 KGGELFAWGQNLHGQLGV--GKIFDSTTAPQIVEHLSGVPLAQISAG--KSHSMALSVSG 108
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G +D P+++ L K++ G SHT ++T+DG FG
Sbjct: 109 NIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAG 168
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
K+GQLG S +NE+ P CLV++ VT ACG T+ S G + + G +
Sbjct: 169 KYGQLGHNSTQNELRP----CLVTKLAGNRVTQVACGRQHTLAYVSDLG-KVFSFGSGEE 223
Query: 193 GQLGH-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
GQLG+ GT N+ S+ +L +E + + + +AG
Sbjct: 224 GQLGNGGTHNQLIPLPMKLPSNEELKFENRTSEKELIIIAG 264
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P IV LS + + AG+
Sbjct: 39 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGK 98
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
SH++ ++ GN ++G N GQLG G ++ PS + L ++ V ACG T L+
Sbjct: 99 SHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLT- 157
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + G +YGQLGH T NE RP + LAG + +VACG
Sbjct: 158 -KDGLVFTFGAGKYGQLGHNSTQNEL---------------RPCLVTKLAGNRVTQVACG 201
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
HT+A V G V+++G G G+LG+ ++ +P + + N L E S +
Sbjct: 202 RQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKL-PSNEELKFENRTSEKEL- 259
Query: 297 SSCTAGGGQ-LYMWGKLKN 314
AGG Q + +W K +N
Sbjct: 260 -IIIAGGNQSILLWIKKEN 277
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + I + G H++ +++ G A+G N HGQLG G I + + +S V
Sbjct: 33 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLA 92
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A + ++ +I + G +GQLG G +T D P I AL
Sbjct: 93 QISAGKSHSMALSVSGNIYSWGRNDFGQLGLG-----HTDDKDF---------PSLIEAL 138
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ + +ACG +HT + G V+T+G G YG+LGH ++E P V N V
Sbjct: 139 ENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRV 195
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R L + I+++ CG H++A+ G ++ WG +G+LG + D ++ V
Sbjct: 28 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQI-VEHL 86
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLR 334
+ V P A ISAG +S + G +Y WG+ + DD +P + L +
Sbjct: 87 SGV--PLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVE 144
Query: 335 CMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + D ++G +YG+LG+ ++ P V L G V VACG
Sbjct: 145 FLACGGSHTALLTKDGLVFTFGAGKYGQLGHN--STQNELRPCLVTKLAGNRVTQVACGR 202
Query: 394 GHSLVIV 400
H+L V
Sbjct: 203 QHTLAYV 209
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 3516 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 3572
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 3573 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 3632
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + TV + S++G+ + G YG+
Sbjct: 3633 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-SMDGSMVWAFGDGDYGK 3691
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 3692 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 3737
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P++V V + V + I+ G+ ++ + G +Y WG
Sbjct: 3738 QDRLIGLPEGRARNHNRPQQVPVL--SGVFIED--IAVGAEHTLALSSTGDVYAWGSNSE 3793
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 3794 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 3827
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ V+ S + ++ G++ T V+ +G LA
Sbjct: 3468 GKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 3524
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 3583
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V + G ++
Sbjct: 3584 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 3629
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 3630 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 3655
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
L G+ + + G H + + W G YG+LG G
Sbjct: 3656 ----------------LEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTA 3699
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVDIL G+ + VACG S+ +
Sbjct: 3700 KSS--PQKVDILCGIGIKKVACGTQFSVAL 3727
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G +++ + +G H + D ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW-H 746
Query: 357 AQY 359
Y
Sbjct: 747 RPY 749
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVSIQQISAGTSHSL 731
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I +A G + H +A+ G Y WG N GQLG G PT+++
Sbjct: 3755 PQQVPVLSGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 3812
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 3813 LQGKNIRQISAGRCHSAAWT 3832
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4006 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4062
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4063 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4122
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4123 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4181
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4182 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4227
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4228 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4283
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4284 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4317
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3958 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4014
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4073
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4074 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4119
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4120 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4145
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4146 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4189
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4190 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4217
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4245 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4302
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4303 LQGKNVRQISAGRCHSAAWT 4322
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ ++++G +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRTQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS E
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-E 155
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
G G +YGQLG G D + Q P+ I +L G ++VA G H
Sbjct: 156 G-EFFCWGQNKYGQLGLGIDC-------------KKQASPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLL 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G++ E PR I +L+ IV+VACG H++A+ +G + WG
Sbjct: 120 GSE--------------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGIDCKKQASPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 157/380 (41%), Gaps = 48/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 266 DILLPRPLESNVVLDVLQIACGVK--HAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR 323
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
+V ++ + G HT VT G +G H G LG G+ + P P+
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 383
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V CG T ++S + G +G LGHG D E ++Y
Sbjct: 384 EGL--QVALVTCGPWHTALITST--GQLFTFGDGTFGVLGHG-DRE--------NVSY-- 428
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHRE 265
PR + +L+G + VACG HT AV S ++TWG G RLGH +
Sbjct: 429 ---PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGD 485
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
+ P V + +N + S+ T G M +G+L N D
Sbjct: 486 KDARLEPTCVSLLIDSNF---HRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKV 542
Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L+G ++ + G H + + + +WG G LG+G + + P V+
Sbjct: 543 PCLVKDKLAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKT--PTLVE 600
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV +ACG +S I
Sbjct: 601 ALKDRHVKYIACGSNYSAAI 620
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + ++++ACG H V +G ++TWG GRLGH K+ PR V+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVEAMA 329
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
V ++ G ++ G+LY WG L +G D W+ + L G
Sbjct: 330 STTV----DFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG 385
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + + ++G +G LG+G +++ + P++V+ L G+ I+V
Sbjct: 386 LQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG--DRENVSYPREVESLSGLRTIAV 443
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 444 ACGVWHTAAVVE 455
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
G GE+ GS+ + +G + DG + + + L G + +A C + H +
Sbjct: 514 VGLTTSGEVFTMGSSVYGQLGNPQS--DGKVPCLVKDK-LAGESVEEIA--CGAYHVAVL 568
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
+ YTWG+ G+LGHGD R PT+V L +K G +++ +
Sbjct: 569 TSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAI 620
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 172/418 (41%), Gaps = 69/418 (16%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGN---------LVSPTRLRPLVGVDIRFVAAGCVS 67
E G++ G DAV A DGN ++ P L V +D+ +A+G
Sbjct: 221 ESLGDVYIWGEVWADAV-----APDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVR- 274
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H V +G +TWG G+LGHG RP +V L+ ++ G +HT V+
Sbjct: 275 -HMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAVSI 333
Query: 128 DGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLVSEVTATACGADFTVWLSSVEG 181
++G K+ G LG G+ + P P+ L +V + ACG W S++
Sbjct: 334 SDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGL--QVISIACGT----WHSALAT 387
Query: 182 AS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
++ + G +G LGHG +AY P+ + L+G + VACG
Sbjct: 388 SNGKLFTFGDGTFGVLGHGNRE---------SVAY-----PKEVQLLSGLKTITVACGVW 433
Query: 240 HTVAVDSKGY----------VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
HT A+ + ++TWG G RLGH ++ P V N
Sbjct: 434 HTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNF----HQ 489
Query: 290 ISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHH 343
I+ G + G L+ +G+L N+ D P + D L G + + G HH
Sbjct: 490 IACGHTMTIALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCG-AHH 548
Query: 344 F--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ + S +WG G LG+G + S P V+ L+ HV +++CG + I
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDRKS--PTLVEALKERHVKNISCGSSFTSCI 604
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 16/194 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++A G H V +G V+TWG GRLGH KD P+ V+
Sbjct: 255 PKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLA 314
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDD---WMYPKPLMDLSG 330
NV ++ G ++ + +L+ WG K N G D W+ + L G
Sbjct: 315 VTNV----ESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEG 370
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H ++ ++G +G LG+G ++S A PK+V +L G+ I+V
Sbjct: 371 LQVISIACGTWHSALATSNGKLFTFGDGTFGVLGHG--NRESVAYPKEVQLLSGLKTITV 428
Query: 390 ACGYGHSLVIVDRT 403
ACG H+ IV+ T
Sbjct: 429 ACGVWHTAAIVEVT 442
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 3684 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 3740
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 3741 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3800
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 3801 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 3859
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 3860 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3905
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 3906 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 3961
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 3962 GQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCH 3995
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3636 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3692
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 3751
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 3752 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 3797
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 3798 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 3823
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 3824 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 3867
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 3868 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 3895
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 3923 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTG 3980
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 3981 LQGKNVRQISAGRCHSAAWT 4000
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 3972 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4028
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4029 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFG 4088
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4089 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4147
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4148 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4193
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + I+ G+ ++ A G +Y WG
Sbjct: 4194 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDIAVGAEHTLALASTGDVYAWGSNSE 4249
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4250 GQLGLGHTNHVREPTLITILQGKNIRQISAGRCH 4283
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3924 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3980
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4039
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +++++CG H+ V S G ++
Sbjct: 4040 YGKLGHGNSDR--------------QRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLF 4085
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4086 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4111
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4112 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4155
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4156 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4183
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I +A G + H +A+ G Y WG N GQLG G PT+++
Sbjct: 4211 PQQIPVLAGVVIEDIAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI 4268
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4269 LQGKNIRQISAGRCHSAAWT 4288
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 2496 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 2552
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 2553 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2612
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 2613 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 2671
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 2672 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2717
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 2718 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 2773
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 2774 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 2807
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 2448 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 2504
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 2563
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 2564 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 2609
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 2610 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 2635
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 2636 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 2679
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 2680 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 2707
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L G+ I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 2735 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 2792
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 2793 LQGKNVRQISAGRCHSAAWT 2812
>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 535
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 154/366 (42%), Gaps = 82/366 (22%)
Query: 58 IRFVAAGCVSC------------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R++ AG C H +AV +G Y++G N GQLGHG + RP +
Sbjct: 134 LRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIR 193
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL---GSGSIRNEIEPSPVRCLVSE 162
L +I +A AG T+++T+ G AFG + G+ G GS + I P V L +
Sbjct: 194 TLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGS-KTVIAPRLVESLKNI 252
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
A +F + S EG + G+LGH TD+ + +P P
Sbjct: 253 FVVQAAIGNFFTAVLSREG-RVYTFSWGSDGKLGHHTDSN------------DMEPHP-L 298
Query: 223 IAALAGETIVKVACGTNHTVAV---DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ AL +V++A G + + + S VY+ G G G+LGH + DE PR ++ FQ
Sbjct: 299 LGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQ 358
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
N+ P VISAG+ +++ G++ WG
Sbjct: 359 TLNLQP--MVISAGAWHAAVVGRDGRVCTWG----------------------------- 387
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG +YG LG+G ++ A PK VD L + + VA G + V+
Sbjct: 388 --------------WG--RYGCLGHG--NEECEAAPKVVDALTNVKAVHVATGDYTTFVV 429
Query: 400 VDRTNV 405
+ +V
Sbjct: 430 AEDGDV 435
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 53/295 (17%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
P +R L G+ I AAG + + + G+ Y +G++ G+ +G + + P +V
Sbjct: 189 PKPIRTLQGIRIIQAAAG--AGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLV 246
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L + +A G T V++ +G F W G+LG + N++EP P+ + ++
Sbjct: 247 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIP 306
Query: 165 ATACGADFTVWLSSV---EGASILNAGLPQYGQLGHGTDN---------EYNTKDSSVKL 212
A + L G S+ + G G+LGHGT ++ T + +
Sbjct: 307 VVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMV 366
Query: 213 AY-------------------------------EAQPRPRAIAALAGETIVKVACGTNHT 241
E + P+ + AL V VA G T
Sbjct: 367 ISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTT 426
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
V G VY++G G LGH D R NVL PE V S +N
Sbjct: 427 FVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHA------NVLNPELVTSLKQIN 475
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 31/267 (11%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGR-CYTWGR 84
W + G+ D N + P PL+G + + +AAG C+A G Y+ G
Sbjct: 278 WGSDGKLGHHTDSNDMEP---HPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGC 334
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G+LGHG + P ++ + ++ AG H VV DG +GW ++G L
Sbjct: 335 GLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCL 394
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG--TD 200
G G+ E P V L + D+T ++ + +G + + G + LGH D
Sbjct: 395 GHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDG-DVYSFGCGESASLGHNAVID 453
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAAL--AGETIVKVACGTN-----HTVAVDSKGYVYTW 253
E N + + P + +L E +V+++ + HT A+ G +Y +
Sbjct: 454 AEGNRHANVLN--------PELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAF 505
Query: 254 GFGGYGRLGHR---EQKDEWVPRRVDV 277
G G G+LG Q + P +VD+
Sbjct: 506 GAGDKGQLGIELVANQTERVNPEQVDI 532
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 39/366 (10%)
Query: 38 GALDGNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G ++ ++V R P L G+ +R +A G + H + + GR + G N+ QLG ++
Sbjct: 32 GGIEDHIVRVPRSIPQLEGIRVRQIATG--AHHTLVLTSHGRVLSCGSNDHDQLGQ--EV 87
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSP 155
+P V+ L +I + G+ H++ +TE G +G N GQLG+G + + P
Sbjct: 88 STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRF 147
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V+ L V ACG++ L+ + ++ G GQLG GT
Sbjct: 148 VKTLAPFTVVQIACGSNHC--LALLNNGALYAWGDNGNGQLGIGTVG------------- 192
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
E Q P + L G + ++ACG NH++ + G ++ WG +G+LG + KD P
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTL 252
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP---LMDLSGW 331
+ ++ +V I+AG +S+ G ++ +G W + + + L G
Sbjct: 253 LKTLRQQHV----KFIAAGGAHSAALTAHGGVFTFG--------WSFYESHEVRISLRGT 300
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ F + + YG+LG+G + P K+ L G + +A
Sbjct: 301 ESNPQSALARKLFSLIEREFCRHSYGSYGQLGHG--SKNDQLTPMKIQELMGTTITQIAL 358
Query: 392 GYGHSL 397
G H++
Sbjct: 359 GRCHTV 364
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 82 WGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+G G+LG G D I R P + +L ++++ G HT+V+T G L+ G N
Sbjct: 21 FGNTNSGELGLGGIEDHIVR-VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSND 79
Query: 139 HGQLGSGSIRNEIEP-SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
H QLG + EP + ++CL + CG ++ L+ E + G GQLG+
Sbjct: 80 HDQLGQEVSTTKPEPVTALQCL--RIVQVCCGQQHSMALT--EAGQVYMWGSNSKGQLGN 135
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G E ++ PR + LA T+V++ACG+NH +A+ + G +Y WG G
Sbjct: 136 GEGQE-------------SRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNG 182
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
G+LG + P+RV V N + P + I+ G+ +S + G +++WG
Sbjct: 183 NGQLGIGTVGE---PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQL 239
Query: 312 -LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
L +N D +P L L +++ + +G H
Sbjct: 240 GLSDNKDR-AFPTLLKTLRQQHVKFIAAGGAH 270
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 75/337 (22%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGR 78
G +L CGS D +G+ VS T+ P+ + +R V C H +A+ G+
Sbjct: 70 GRVLSCGSNDHDQLGQE--------VSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQ 121
Query: 79 CYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N +GQLG+G+ + R P V L+ + + + G +H + + +G A+G N
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDN 181
Query: 138 KHGQLGSGSIRNEIEPSPVR---CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+GQLG G++ E + PV L ++ ACGA+ ++ LS + I G ++GQ
Sbjct: 182 GNGQLGIGTV-GEPQRVPVEVTNLLGLPLSQIACGANHSMVLS--KSGVIFVWGSNRFGQ 238
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG +DN KD + P + L + + +A G H+ A+ + G V+T+G
Sbjct: 239 LG-LSDN----KDRAF---------PTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284
Query: 255 ----------------------------------------FGGYGRLGHREQKDEWVPRR 274
+G YG+LGH + D+ P +
Sbjct: 285 WSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMK 344
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
+ + I+ G ++ C A G+++ +G
Sbjct: 345 IQELMGTTI----TQIALGRCHTVCYAPTVGKVFTFG 377
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 96/224 (42%), Gaps = 44/224 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G+ + +A G + H + + G + WG N GQLG D R PT++
Sbjct: 198 PVEVTNLLGLPLSQIACG--ANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKT 255
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI---EPSP----VRCL 159
L + +K AG +H+ +T G FGW+ + S +R + E +P R L
Sbjct: 256 LRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFY---ESHEVRISLRGTESNPQSALARKL 312
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S + C + YGQLGHG+ N+ Q
Sbjct: 313 FSLIEREFCRHSYG-----------------SYGQLGHGSKND--------------QLT 341
Query: 220 PRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
P I L G TI ++A G HTV + G V+T+G GG G+LG
Sbjct: 342 PMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNA 187
+L FG G+LG G I + I P E V A GA T+ L+S +L+
Sbjct: 18 TLGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTS--HGRVLSC 75
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G + QLG E +T +P + AL IV+V CG H++A+
Sbjct: 76 GSNDHDQLG----QEVSTT------------KPEPVTALQCLRIVQVCCGQQHSMALTEA 119
Query: 248 GYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGG 304
G VY WG G+LG+ E Q+ PR V L P V+ ++ C A G
Sbjct: 120 GQVYMWGSNSKGQLGNGEGQESRLSPRFV------KTLAPFTVVQIACGSNHCLALLNNG 173
Query: 305 QLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGH 356
LY WG + G+ P + +L G L + G H V + S I WG
Sbjct: 174 ALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGS 233
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
++G+LG K A P + L HV +A G HS
Sbjct: 234 NRFGQLGLS--DNKDRAFPTLLKTLRQQHVKFIAAGGAHS 271
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 144/360 (40%), Gaps = 48/360 (13%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V +G Y+WG G+LGHG +P +V L+ I+ G HT
Sbjct: 316 ISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHT 375
Query: 123 VVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSS 178
VT G+ + G G LG G+ + P + + V++ +CG T ++S
Sbjct: 376 CAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTS 435
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ G +G LGHG + PR + +L G V+ ACG
Sbjct: 436 --AGQLFTFGDGSFGVLGHGDRQSLSV--------------PREVESLKGLRTVRAACGV 479
Query: 239 NHTVAVD------------SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
HT AV S G ++TWG G GRLGH ++ VP V V P
Sbjct: 480 WHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASL----VEPN 535
Query: 287 EAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
++ G + G +Y ++G+L N D M P + N S
Sbjct: 536 FCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGA 595
Query: 342 HH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+H + + + +WG G LG+G ++S P V+ L+ V SV CG + I
Sbjct: 596 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS--PTLVEALKDKQVRSVVCGINFTAAI 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 105/259 (40%), Gaps = 35/259 (13%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P RL PL G+ + ++ G H V G+ +T+G G LGHGD+
Sbjct: 400 GNEVSHWMPKRLNGPLEGIHVSSISCG--PWHTAVVTSAGQLFTFGDGSFGVLGHGDRQS 457
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 458 LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHG 517
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+ P+ V LV ACG FTV L++ + G YGQLG+
Sbjct: 518 DKDTRLVPTCVASLVEPNFCQVACGHCFTVALTT--SGHVYTMGSSVYGQLGNP------ 569
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
D V E + L + +++CG H + S+ VYTWG G GRLGH
Sbjct: 570 QADGMVPARVEGK--------LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Query: 265 EQKDEWVPRRVDVFQRNNV 283
+ D P V+ + V
Sbjct: 622 DTDDRNSPTLVEALKDKQV 640
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G VY+WG GRLGH D P+ V+
Sbjct: 302 PKPLEFAGRLD--VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEA 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLM-D 327
N+ +++ G ++ G LY WG L +G++ WM PK L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWM-PKRLNGP 414
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L G ++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRT 472
Query: 387 ISVACGYGHSLVIVD 401
+ ACG H+ +V+
Sbjct: 473 VRAACGVWHTAAVVE 487
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE-------------GRCYTWGRNERGQ 89
+L P + L G +R V A C H AV VE G+ +TWG ++G+
Sbjct: 457 SLSVPREVESLKG--LRTVRAACGVWHTAAV-VEVMVGNSSTSNCSSGKIFTWGDGDKGR 513
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK R PT V+ L + + G TV +T G+ G + +GQLG+ G
Sbjct: 514 LGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADG 573
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +E + V E++ CGA L+S + G G+LGHG ++ N+
Sbjct: 574 MVPARVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGDTDDRNS 628
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + V CG N T A+
Sbjct: 629 --------------PTLVEALKDKQVRSVVCGINFTAAI 653
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 37/340 (10%)
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
N R G K+ P + + ++ G H +VT+ G ++G G+LG
Sbjct: 286 NSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGH 345
Query: 145 GSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
G + +P V L + ACG T ++ G +G LGHG + +
Sbjct: 346 GVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSH 405
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ R L G + ++CG HT V S G ++T+G G +G LGH
Sbjct: 406 ------------WMPK-RLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGH 452
Query: 264 REQKDEWVPRRVD-------VFQRNNVLPPEAVISAGSVNSSCT-AGGGQLYMW-----G 310
+++ VPR V+ V V AV+ NSS + G+++ W G
Sbjct: 453 GDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKG 512
Query: 311 KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS---CISWGHAQYGELGYGP 366
+L + + D + P + L N + G H F A ++ + G + YG+LG P
Sbjct: 513 RLGHGDKDTRLVPTCVASLVEPNFCQVACG--HCFTVALTTSGHVYTMGSSVYGQLG-NP 569
Query: 367 YGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
Q +P +V+ L V ++CG H V+ RT V
Sbjct: 570 --QADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEV 607
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 136/321 (42%), Gaps = 28/321 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H V G +T G N GH D + RP +V L K+ AG + TV +T
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G+ G N HGQLG G ++ P + L S V A G + LS E ++ +
Sbjct: 234 QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL-SSVVQIAAGPSYI--LSVTENGTVYSF 290
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G LGHG ++ E QPRP G IV+V+ G H VA+DS
Sbjct: 291 GSGANFCLGHGEQHD------------ELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSN 338
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-------VISAGSVNSSCT 300
G+VYTWG G G LGH ++ ++ P + + + A ++++GSV +
Sbjct: 339 GFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGS 398
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQY 359
G G L + D + P+ L L ++ + +G H V + +G +
Sbjct: 399 MGFGSLGFLD--RRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNER 456
Query: 360 GELGYGPYGQKSSAMPKKVDI 380
+LG+ +S P ++ I
Sbjct: 457 AQLGHDTL--RSCLEPTQIFI 475
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
+AVG+ N +P +R G + VAAG H +A+ G + WG N GQL
Sbjct: 123 NAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGF--NHSLALTSAGTVFAWGDNSTGQL 180
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G G + R P VS S I AG H++ +T G A+G N GQLG G+ N
Sbjct: 181 GDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNR 240
Query: 151 IEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P V V + VTA A G ++ ++S A GQLG G++ +D+S
Sbjct: 241 STPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNF--VGQLGDGSNIN---RDAS 295
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
V + G T+ VA G H++A+ S G V +WG +G+LG +D
Sbjct: 296 VHVRLP-----------PGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDR 344
Query: 270 WVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWG 310
P V LPP I+ AG + G + WG
Sbjct: 345 NTPGSVS-------LPPGVTITAVAAGDLFGLALTSAGTVLAWG 381
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 142/346 (41%), Gaps = 40/346 (11%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H +AV G WGRN GQLG G I R P V + AG +H++ +T
Sbjct: 106 AHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTS 165
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILN 186
G A+G N GQLG G+ N P V + +TA A G ++ L+S ++
Sbjct: 166 AGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSA--GTVFA 223
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G GQLG GT +T P + G + +A G +H++AV S
Sbjct: 224 WGDNSTGQLGDGTRTNRST--------------PVVVGLPVGTIVTAIAGGGSHSLAVTS 269
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNSSCTAGG 303
G WG G+LG + R V R LPP ++A G +S
Sbjct: 270 AGNARAWGNNFVGQLGDGSNIN----RDASVHVR---LPPGTTVTAVAGGLTHSLALTSV 322
Query: 304 GQLYMWGKLKNN----GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
G + WG NN GD D P + G + + +G++ + + + ++W
Sbjct: 323 GTVLSWG--SNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAW 380
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G G+LG G + + P + + ++A G GHSL +V
Sbjct: 381 GGNIVGQLGDGTTTVRRT--PVAASLPTATTITAIATGSGHSLALV 424
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 137/332 (41%), Gaps = 37/332 (11%)
Query: 79 CYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
WG N GQLG G R P V ++ A G +H++ VT G LA+G N
Sbjct: 64 VLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRN 123
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G+ N P VR L T TA A F L+ ++ G GQLG
Sbjct: 124 AVGQLGDGTTINRSTPVDVR-LPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGD 182
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
GT +T P A++ +G I VA G H++A+ S G V+ WG
Sbjct: 183 GTRTNRST--------------PVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS 228
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNSSCTAGGGQLYMW----- 309
G+LG + + P V LP +++A G +S G W
Sbjct: 229 TGQLGDGTRTNRSTPVVVG-------LPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFV 281
Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPY 367
G+L + + + L +G + H + S + +SWG +G+LG G
Sbjct: 282 GQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTA 341
Query: 368 GQKSSAMPKKVDILEGMHVISVACG--YGHSL 397
+++ P V + G+ + +VA G +G +L
Sbjct: 342 RDRNT--PGSVSLPPGVTITAVAAGDLFGLAL 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 127/287 (44%), Gaps = 34/287 (11%)
Query: 132 LAFGWNKHGQLGSGSIRN-EIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
LA+G N +GQLG G+ N P PV +EVTA A G ++ ++S ++L G
Sbjct: 65 LAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSA--GTVLAWGR 122
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
GQLG GT T + S + P G T+ VA G NH++A+ S G
Sbjct: 123 NAVGQLGDGT-----TINRSTPVDVRLPP---------GTTVTAVAAGFNHSLALTSAGT 168
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+ WG G+LG + + P V F V+ ++AG ++S G ++ W
Sbjct: 169 VFAWGDNSTGQLGDGTRTNRSTPVAVS-FPSGTVI---TAVAAGGMHSLALTSAGTVFAW 224
Query: 310 GKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
G GD + P + G + + G H V + + +WG+ G+L
Sbjct: 225 GDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQL 284
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
G G + +++ V + G V +VA G HSL + T+VG L
Sbjct: 285 GDGSNINRDASV--HVRLPPGTTVTAVAGGLTHSLAL---TSVGTVL 326
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
++V ++L G YGQLG GT N Y T V L P+ G + A
Sbjct: 57 TTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGL-------PK------GTEVTAAAG 103
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AG 293
G H++AV S G V WG G+LG + P VDV LPP ++ AG
Sbjct: 104 GDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTP--VDVR-----LPPGTTVTAVAAG 156
Query: 294 SVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+S G ++ WG GD + P + SG + + +G MH +
Sbjct: 157 FNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALT 216
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ + +WG G+LG G +S+ P V + G V ++A G HSL + N
Sbjct: 217 SAGTVFAWGDNSTGQLGDGTRTNRST--PVVVGLPVGTIVTAIAGGGSHSLAVTSAGN 272
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P +++ L G DI+ A G H +A+ EG+ Y+WG+N +LG+ Q P I+
Sbjct: 65 LYPKKIKELCGKDIKTFAYG-KGPHVLALTEEGKVYSWGQNCHYELGNTFNNQALTPGII 123
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--- 161
+ L I G H++ +T DG A+G N GQ+G ++ P + +
Sbjct: 124 TNLCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTG 183
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+V +CG F+V +++ + + G GQLG +N+ Q P
Sbjct: 184 KKVICISCGDSFSVVVTN--NGEVYSWGCNDVGQLGIENNND--------------QFHP 227
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQ 279
I +LA I KV CG+ HT+A+ +G +Y WG YG+LG + W P +++V +
Sbjct: 228 CKITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLEVPE 287
Query: 280 RNNVL 284
VL
Sbjct: 288 MRRVL 292
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 21/234 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
Y G N G LG GD P + EL IK G+ H + +TE+G ++G N
Sbjct: 46 YAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEGKVYSWGQNC 105
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
H +LG+ + P + L +E + ACG+ ++ L++ + G GQ+G
Sbjct: 106 HYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTN--DGEVYAWGQNTSGQVGC 163
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
D Q PR + L G+ ++ ++CG + +V V + G VY+WG
Sbjct: 164 HDDTTL------------VQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGCN 211
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G+LG D++ P ++ + + E V+ GS+++ + G LY+WG
Sbjct: 212 DVGQLGIENNNDQFHPCKITSLAK---IVIEKVV-CGSIHTLALSDEGVLYVWG 261
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 157/381 (41%), Gaps = 48/381 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 266 ADVLLPRPLESNVVLDVHHIACGVR--HAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----P 155
+V L+ + G HT VT G +G H G LG G+ + P P
Sbjct: 324 RLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGP 383
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ L +V + CG T ++S + G +G LGHG D E +AY
Sbjct: 384 LEGL--QVASVTCGPWHTALVTST--GQLFTFGDGTFGVLGHG-DRE--------NVAY- 429
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHR 264
PR + +L+G + ACG HT AV S G ++TWG G RLGH
Sbjct: 430 ----PREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHG 485
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
+++ P V N + S+ T G M +G+L N D
Sbjct: 486 DKEPRLKPTCVPALIDYNF---HKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGK 542
Query: 321 YPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D LSG ++ + G H + + + +WG G LG+G + + P V
Sbjct: 543 LPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKA--PILV 600
Query: 379 DILEGMHVISVACGYGHSLVI 399
+ L+ HV +ACG ++ I
Sbjct: 601 EALKDRHVKYIACGANYTAAI 621
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG H V +G V+TWG GRLGH KD PR V+
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLA 330
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
+ V ++ G ++ G++Y WG L +G+D W+ + L G
Sbjct: 331 VSTV----DFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEG 386
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H V + ++G +G LG+G +++ A P++V+ L G+ I+
Sbjct: 387 LQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--DRENVAYPREVESLSGLRTIAA 444
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 445 ACGVWHTAAVVE 456
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 1623 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 1679
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 1680 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 1739
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 1740 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 1798
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 1799 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 1844
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 1845 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 1900
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 1901 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 1934
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 1575 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 1631
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 1690
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 1691 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 1736
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 1737 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 1762
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 1763 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 1806
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 1807 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 1834
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 1862 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 1919
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 1920 LQGKNVRQISAGRCHSAAWT 1939
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q + +
Sbjct: 65 PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G + Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 35/298 (11%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ G S + VT++ FG N LG+G ++ + P + L ++ + + G
Sbjct: 23 KVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG 82
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ V LS+ +G + G Y QLG+GT N+ + L +
Sbjct: 83 SGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GIATVQVCTNLLIK 128
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V N L + V
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-----TNCLHIKRV 183
Query: 290 --ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
I+ G +S G++Y WG L NNG+ + P + L + + G
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGY 242
Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
H D + +WG YG+LG G K++ + ++E V+ + AC H+
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVEIAACHSAHT 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 148/356 (41%), Gaps = 52/356 (14%)
Query: 64 GCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
G ++C H V +G +TWG G+LGHG RP +V L+ + G
Sbjct: 267 GEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEY 326
Query: 121 HTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLVSEVTATACGADFTV 174
HT V+ G+ +G H G LG G+ + P P+ L +V + ACG
Sbjct: 327 HTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL--QVLSVACG----T 380
Query: 175 WLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
W S++ ++ + G +G LGHG E+ P PR + L+G +
Sbjct: 381 WHSALATSNGKLFTFGDGTFGVLGHGDR--------------ESVPYPREVQILSGLKTI 426
Query: 233 KVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
KVACG HT A+ S ++TWG G RLGH ++ +P V N
Sbjct: 427 KVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYN 486
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKPLMD-LSGWNLRCMD 337
+ ++ + T G M +G+L N D P + D L G + +
Sbjct: 487 F---HQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEIS 543
Query: 338 SGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
G H + + S +WG G LG+G + S P V+ L+ +V S++CG
Sbjct: 544 CGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRS--PTFVEALKDRNVKSISCG 597
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 31/244 (12%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G+ + VA C + H G+ +T+G G LGHGD+ P V LS K
Sbjct: 367 PLEGLQVLSVA--CGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLK 424
Query: 112 IKKAGAGRSHTV----VVTEDGNSLA----FGW---NKHGQLGSGSIRNEIEPSPVRCLV 160
K G HT V+++ G +++ F W +KH +LG GS + P+ V L+
Sbjct: 425 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKH-RLGHGSKETYLLPTCVSALI 483
Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
ACG TV L++ + G YGQLG+ S +L Q +
Sbjct: 484 DYNFHQLACGHTMTVALTT--SGHVFTMGGTAYGQLGNPL--------SDGRLPCLVQDK 533
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
L GE + +++CG H + S+ V+TWG G GRLGH + +D P V+ +
Sbjct: 534 ------LVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALK 587
Query: 280 RNNV 283
NV
Sbjct: 588 DRNV 591
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ACG H V +G V+TWG GRLGH D P V+ NNV ++
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNV----DFVAC 323
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G ++ + G L+ WG +N W+ + L G + + G H
Sbjct: 324 GEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHS 383
Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
++ ++G +G LG+G ++S P++V IL G+ I VACG H+ I++
Sbjct: 384 ALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQILSGLKTIKVACGVWHTAAIIEV 441
Query: 403 -----TNVGER 408
TN+ R
Sbjct: 442 MSQSGTNISSR 452
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ +TWG ++ +LGHG K PT VS L Y + G + TV +T G+ G
Sbjct: 453 KLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGT 512
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
+GQLG N + + CLV + V +CGA L+S + + G
Sbjct: 513 AYGQLG-----NPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTS--RSEVFTWGRGA 565
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G+LGHG +T+D + P + AL + ++CG+N T ++
Sbjct: 566 NGRLGHG-----DTED---------RRSPTFVEALKDRNVKSISCGSNFTASI 604
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 42 GNLVSPTRLRPLVGVDI--RFVA-AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN +S RL LV + FV C + H + +TWGR G+LGHGD R
Sbjct: 518 GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDR 577
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVV 125
PT V L +K G + T +
Sbjct: 578 RSPTFVEALKDRNVKSISCGSNFTASI 604
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 158/387 (40%), Gaps = 51/387 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+R + +G + H V EG+ +TWG G+LGHG +P
Sbjct: 78 DVLTPRLLESTVVLDVRDIVSG--THHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH 135
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V + G HT V++ N +G H G LG G+ + P V +
Sbjct: 136 LVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFL 195
Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
V + ACG+ W S++ ++ + G +G LGHG E+
Sbjct: 196 DGLRVVSVACGS----WHSALATSNGKLFTFGDGTFGVLGHGDQ--------------ES 237
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGY----------VYTWGFGGYGRLGHREQ 266
P+ + L+G VKVACG HT A+ + ++TWG G RLGH +
Sbjct: 238 VMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNK 297
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
P RV N I+ G + G ++ G+L N
Sbjct: 298 DMYLKPTRVSPLIEYNF----QQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKV 353
Query: 322 PKPLMD-LSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D L G + + G HH V + S +WG G LG+G + S P V
Sbjct: 354 PTLVQDKLLGEFIEEISCG-AHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKS--PTLV 410
Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
L+ H+ +++CG + + ++ V
Sbjct: 411 LALKDRHLKNISCGSNFTSCVCNQKYV 437
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R V+ C S H G+ +T+G G LGHGD+ P V LS K K
Sbjct: 198 LRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVAC 257
Query: 118 GRSHTVVVTE---DGNSLAFGWNKHG-------QLGSGSIRNEIEPSPVRCLVS-EVTAT 166
G HT + E S A W +LG G+ ++P+ V L+
Sbjct: 258 GVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQI 317
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
ACG TV L++ + G + GQLG+ +++ K+ Q + L
Sbjct: 318 ACGHTMTVALTT--SGHVFTMGSTENGQLGN--------PNAAGKVPTLVQDK------L 361
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
GE I +++CG +H AV S+ +YTWG G GRLGH + D P V + ++
Sbjct: 362 LGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHL--- 418
Query: 287 EAVISAGSVNSSCTAGGGQLYMWG 310
IS GS +SC Q Y+ G
Sbjct: 419 -KNISCGSNFTSCVC--NQKYVSG 439
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 138/348 (39%), Gaps = 33/348 (9%)
Query: 73 VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
++ +G Y WG E G K P ++ ++ +G H +V+ +G
Sbjct: 56 IESKGDVYIWG--EVFADGFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVF 113
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G G+LG G ++ +P V V + ACG T +S + G
Sbjct: 114 TWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHN 173
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYV 250
G LGHG + + P+++ L G +V VACG+ H+ S G +
Sbjct: 174 VGLLGHGNEISHWI--------------PKSVNGFLDGLRVVSVACGSWHSALATSNGKL 219
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP------PEAVISAGSVNSSCTAGGG 304
+T+G G +G LGH +Q+ P+ V + + A I + S A
Sbjct: 220 FTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSW 279
Query: 305 QLYMWG---KLK---NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHA 357
+L+ WG K + N D ++ P + L +N + + G+ M + + G
Sbjct: 280 KLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGST 339
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ G+LG K + + D L G + ++CG H + R+ +
Sbjct: 340 ENGQLGNPNAAGKVPTLVQ--DKLLGEFIEEISCGAHHVAAVTSRSEL 385
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 155/361 (42%), Gaps = 51/361 (14%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C S H +G +TWG G+LGHG RP +V L+ ++ G HT
Sbjct: 231 ACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTC 290
Query: 124 VVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLVSEVTATACGADFTVWLS 177
VVT G+ +G + G LG G+ + P P+ L +V + ACG+ W S
Sbjct: 291 VVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL--QVLSVACGS----WHS 344
Query: 178 SVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++ +S + G +G LGHG D E +AY P+ + AL+G +KVA
Sbjct: 345 ALTMSSGKLFTFGDGTFGSLGHG-DRE--------SVAY-----PKEVEALSGFRAMKVA 390
Query: 236 CGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
CG H+ A V+ G ++TWG G RLGH +++ + VP V +N
Sbjct: 391 CGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNF-- 448
Query: 286 PEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
++ G + A G ++ G+L N D P + D G L S
Sbjct: 449 --HQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCG 506
Query: 341 MHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+H + + S +WG G LG+G K P VD L+ HV S++CG +
Sbjct: 507 SNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKK--PTLVDALKDRHVKSISCGSNFTTC 564
Query: 399 I 399
I
Sbjct: 565 I 565
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 47 PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R+ PL G+ + VA G S H G+ +T+G G LGHGD+ P V
Sbjct: 322 PKRVSGPLEGLQVLSVACG--SWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVE 379
Query: 106 ELSKYKIKKAGAGRSHTVVVTE-----DGNSLA---FGWNK--HGQLGSGSIRNEIEPSP 155
LS ++ K G H+ + E N+++ F W +LG G ++ P+
Sbjct: 380 ALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTC 439
Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V+ LV ACG TV L++ + G GQLG N K A
Sbjct: 440 VQALVDHNFHQVACGHSMTVALAT--SGHVFTMGSSNNGQLG-------NPK------AD 484
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
QP L E + +++CG+NH A+ S+ VYTWG G GRLGH +D+ P
Sbjct: 485 GKQP-CMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTL 543
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSC 299
VD + +V IS GS ++C
Sbjct: 544 VDALKDRHV----KSISCGSNFTTC 564
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ACG+ H +G V+TWG GRLGH D P+ V+ +NV I+
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNV----EYIAC 284
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G ++ G LY WG N W+ + L G + + G+ H
Sbjct: 285 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 344
Query: 344 FVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ S ++G +G LG+G ++S A PK+V+ L G + VACG HS IV+
Sbjct: 345 ALTMSSGKLFTFGDGTFGSLGHG--DRESVAYPKEVEALSGFRAMKVACGVWHSAAIVE 401
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 63/347 (18%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE--LSKYKIKKAGAG 118
+A C H + + EGR Y G N+ GQLG + E + K AG
Sbjct: 45 IALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAG 104
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTATACGADFTV 174
H+ ++EDG +G N GQLG G R + + + + S + A A GA+ ++
Sbjct: 105 DFHSAAISEDGRVYMWGRNTQGQLGLGK-RGKGKVCAAQWVESLKDFRIQALALGAEHSL 163
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
LS E +L+ G G+LGHG + ++ S + + E PR + + KV
Sbjct: 164 ALS--EEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYT--PRLVKGFRDVKVSKV 219
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A G H+ +D +G ++T+G G +LG +D P+RV V+PP I+ G
Sbjct: 220 AAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVP------VIPPVEEIACGG 273
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
++ + GQLYMWG
Sbjct: 274 YHTGAISRNGQLYMWGS------------------------------------------- 290
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIV 400
+YG LG+G Q ++++P V+ LE + V V CG+ H++ +
Sbjct: 291 --NEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALT 335
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 26/213 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------------KIQRDRPTIV 104
D R A + H +A+ EG +WG + G+LGHG+ K P +V
Sbjct: 149 DFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLV 208
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
K+ K AG +H+ + E G+ FG + QLG G R+ EP V ++ V
Sbjct: 209 KGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVP-VIPPVE 267
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG T +S + G +YG LG G ++ T S+ + E
Sbjct: 268 EIACGGYHTGAIS--RNGQLYMWGSNEYGCLGFGYKHQNAT---SLPMLVEG-------- 314
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
AL + +V CG HT+A+ G V+ WG+GG
Sbjct: 315 ALESLRVTQVQCGWKHTMALTVDGDVFAWGWGG 347
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
D +V WG G YGRLG + W P Q L P A ++ G ++ G
Sbjct: 6 DKHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQH---LQPIA-LACGGAHTLVLTEEG 61
Query: 305 QLYM-----WGKL-----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCIS 353
++Y WG+L + +++ + L D + + +G+ H + D
Sbjct: 62 RVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDEA--KFTHIAAGDFHSAAISEDGRVYM 119
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG G+LG G G+ + V+ L+ + ++A G HSL + + V
Sbjct: 120 WGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEV 171
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 28/268 (10%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVE 76
K G LL CG + +GR+ GN +R+ + ++ + V C + H VA+ E
Sbjct: 51 KDGTLLSCGQNPYGQLGRK-----GN---NSRIEQISSLEAQTIVDVSCGTNHSVAMCDE 102
Query: 77 GRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G Y+WG GQLG G ++ P ++ L KI + G H+V + EDG ++G
Sbjct: 103 GNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWG 162
Query: 136 WNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
NK GQLG GS I N+ P V+ L + V TA G+ T LS ++ G
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQ-TFALSM--SGTVFAWGRNNA 219
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG D A + +P A+ +L + ++CG HT ++ G VYT
Sbjct: 220 GQLGFKND------------AKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYT 267
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+G YG+LG + VP++++ + R
Sbjct: 268 FGDDTYGQLGQQSGNQTSVPQKIEEYSR 295
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 29/233 (12%)
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L ++ ++L+ G YGQLG +N R I++L +TIV V+
Sbjct: 47 LYLLKDGTLLSCGQNPYGQLGRKGNNS----------------RIEQISSLEAQTIVDVS 90
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CGTNH+VA+ +G +Y+WG G G+LG + + P+R+ ++ IS G+
Sbjct: 91 CGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQ----ISCGN 146
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S A G+++ WG+ L + + P+ + L G L + +G F +
Sbjct: 147 FHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS 206
Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S + +WG G+LG+ +K + P VD L + V ++CG H+ V+
Sbjct: 207 MSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 153/341 (44%), Gaps = 43/341 (12%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-----KIKKAGAGRSHTVVVTEDGNSLAF 134
Y WG N GQL ++ ++ + + + Y ++K G H++ + +DG L+
Sbjct: 2 YCWGDNCFGQLA---VLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSC 58
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
G N +GQLG + IE + L ++ + +CG + +V + + +I + G G
Sbjct: 59 GQNPYGQLGRKGNNSRIE--QISSLEAQTIVDVSCGTNHSV--AMCDEGNIYSWGDGSEG 114
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLG G ++++K+ + P+ I L I++++CG H+VA+ G V++W
Sbjct: 115 QLGTG---KFSSKNFT----------PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSW 161
Query: 254 GFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
G G+LG Q ++ P+ V + P ++AG + + G ++ WG+
Sbjct: 162 GQNKCGQLGLGSQIINQATPQLVKSLKG----IPLVQVTAGGSQTFALSMSGTVFAWGRN 217
Query: 312 ------LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELG 363
KN+ + P + L + + G H V D ++G YG+LG
Sbjct: 218 NAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG 277
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
Q S +P+K++ V VACG H+L+ V N
Sbjct: 278 QQSGNQTS--VPQKIEEY-SRQVSQVACGRYHTLLYVFTCN 315
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DR 100
N +P ++ L G+ + V AG A+ + G + WGRN GQLG + ++ +
Sbjct: 177 NQATPQLVKSLKGIPLVQVTAG--GSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P V L + G HT V+ +DG FG + +GQLG S P +
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYS 294
Query: 161 SEVTATACG 169
+V+ ACG
Sbjct: 295 RQVSQVACG 303
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 158/394 (40%), Gaps = 63/394 (15%)
Query: 38 GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
G++ G+ P L LVG +D++ +A G H + +G ++WG+ G+LGH
Sbjct: 465 GSMLGSEDLPKALPRLVGSTKMLDVQSIACG--ENHAAIITKQGEVFSWGKESSGRLGHK 522
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEI 151
+ P IV L+ +K G HT VT G + G N G L RN+
Sbjct: 523 VNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGELFEWGEGANSLGLLNDWYGRNQW 582
Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
P + + ++ + ACG ++S + G +G LGHG
Sbjct: 583 VPHKLFGPMDNISVSKIACGEWHMAIITS--SGQLFTYGDGTFGVLGHGDT--------- 631
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
+ RP+ + +L G + VACG HT A+ G ++TWG G
Sbjct: 632 -----QGIARPKEVESLKGLRMSSVACGPWHTAAIVEVMSSFKANAPSGKLFTWGNADRG 686
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---------- 309
+L H ++K + VP VD ++I + SC +
Sbjct: 687 KLDHADKKMKLVPTCVD-----------SLIVYDFIQVSCGMALTVVLTVTGVVFTVGSS 735
Query: 310 --GKLKNNGDDWMYPKPLMDLSGWNL-RCMDSGNMH-HFVGADSSCISWGHAQYGELGYG 365
G+L N D Y + L R + SG+ H + + +WG G+LG G
Sbjct: 736 RHGQLGNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLG 795
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
Y +SS P V+ LEG HV S+ACG + I
Sbjct: 796 DYVNRSS--PTLVEALEGRHVESIACGSSFTAAI 827
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)
Query: 220 PRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P+A+ L G T + +ACG NH + +G V++WG GRLGH+ P+ V
Sbjct: 474 PKALPRLVGSTKMLDVQSIACGENHAAIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIV 533
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---DDWM-----YPK---- 323
+V V++ GS ++ G+L+ WG+ N+ +DW P
Sbjct: 534 KTLASVHV----KVVAFGSKHTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWVPHKLFG 589
Query: 324 PLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
P+ ++S + C G H + + ++G +G LG+G + A PK+V+ L+
Sbjct: 590 PMDNISVSKIAC---GEWHMAIITSSGQLFTYGDGTFGVLGHG--DTQGIARPKEVESLK 644
Query: 383 GMHVISVACGYGHSLVIVD 401
G+ + SVACG H+ IV+
Sbjct: 645 GLRMSSVACGPWHTAAIVE 663
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 29/265 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+R +A G H VA++ G+ +TWG G LGH + P +V + +IK
Sbjct: 170 VRCIALG--GLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIAT 227
Query: 118 GRSHTVVVTEDGNSLAFGWNK---HGQLGSGSIRNE----IEPSPVRCLVSEVTATACGA 170
+HT +TE G +G ++ LG G NE P VR L + V A +CG
Sbjct: 228 SGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGG 287
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
FT+ L V+G + N G +LG G + +E +P P +L
Sbjct: 288 FFTMALG-VDG-KLWNWGANTNFELGRGNNIG----------GWEPKPVP----SLEDTP 331
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
I+++ CG H++ + G V +WG+GG+G+LGH ++E VPR +D V+ +
Sbjct: 332 IIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVI---YIA 388
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNN 315
GS +++ TA G+LYMWG K++
Sbjct: 389 CCGSSSAAVTA-EGKLYMWGNAKDS 412
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G L P R+R L A C +A+ V+G+ + WG N +LG G+ I P
Sbjct: 265 GGLSIPCRVRAL---PAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEP 321
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V L I + G H++V+T DG L++G+ HGQLG SI+NE P + L
Sbjct: 322 KPVPSLEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALAD 381
Query: 162 E-VTATAC 168
+ V AC
Sbjct: 382 KRVIYIAC 389
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E++ +A G H+VA+++ G V+TWG+GG+G LGH E VPR V+ R + +
Sbjct: 168 ESVRCIALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRI---KH 224
Query: 289 VISAGSVNSSCTAGGGQLYMWGK-------------LKNNGDDWMYPKPLMDLSGWNLRC 335
+ ++G+ ++ T G++Y WG+ N G P + L
Sbjct: 225 IATSGAHTAAITE-SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAV 283
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +G D +WG ELG G PK V LE +I + CG H
Sbjct: 284 SCGGFFTMALGVDGKLWNWGANTNFELGRG--NNIGGWEPKPVPSLEDTPIIQIVCGGYH 341
Query: 396 SLVI 399
SLV+
Sbjct: 342 SLVL 345
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 44/252 (17%)
Query: 69 HCVAVDVEGRCYTWGR---------------NERGQLGHGDKIQRDRPTIVSELSKYKIK 113
H A+ G YTWGR NE G L ++ R P V+ +S
Sbjct: 231 HTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRV-RALPAPVAAVS----- 284
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADF 172
G T+ + DG +G N + +LG G+ EP PV L + + CG
Sbjct: 285 ---CGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYH 341
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
++ L+ +L+ G +GQLGH SS+ + + PR I ALA + ++
Sbjct: 342 SLVLTG--DGKVLSWGYGGHGQLGH----------SSI----QNEKVPRVIDALADKRVI 385
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVIS 291
+AC + + AV ++G +Y WG +LG + + P V ++ L P V+S
Sbjct: 386 YIACCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLS 445
Query: 292 --AGSVNSSCTA 301
G+ ++ C
Sbjct: 446 VAVGASHAMCLV 457
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 139/359 (38%), Gaps = 45/359 (12%)
Query: 66 VSCHCV--AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
+SC ++ V G+ + WG+ + G+LG G + PT+ S L ++ G H+V
Sbjct: 124 ISCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHSV 181
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV----RCLVSEV-TATACGADFTVWLSS 178
+ G +G+ G LG E+ P V R + + T+ A A T
Sbjct: 182 ALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAIT----- 236
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E + G + + + + + P +AA V+CG
Sbjct: 237 -ESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAA--------VSCGG 287
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
T+A+ G ++ WG LG W P+ V + P I G +S
Sbjct: 288 FFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDT----PIIQIVCGGYHSL 343
Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPK---PLMDLSGWNLRCMDSGNMHHFVGADS 349
G G++ W G+L ++ + P+ L D + C S + V A+
Sbjct: 344 VLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAA--VTAEG 401
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDIL---EGM---HVISVACGYGHSLVIVDR 402
WG+A+ +LG P + P +V L +G+ HV+SVA G H++ +V R
Sbjct: 402 KLYMWGNAKDSQLGV-PGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D + C H + + +G+ +WG GQLGH P ++ L+ ++
Sbjct: 329 DTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIA 388
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
S + VT +G +G K QLG + E++ SPV +
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP-EVQTSPVEVIF 431
>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 1 [Sus scrofa]
Length = 458
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 150/354 (42%), Gaps = 49/354 (13%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG G K P +SE K +K+ G H+ +VT+ G+ G NK
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNK 77
Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG G + + + + L+ + ACG DFT+ L+ + +L+ G +GQLG
Sbjct: 78 DGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILT--KNGQVLSCGSNSFGQLG- 134
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ + V A E Q E +V +A G H +A + G V+ WG G
Sbjct: 135 ---VPHGPRRCVVPQAIEVQ----------REKVVSIAAGLRHALAATASGLVFQWGT-G 180
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMW---- 309
G R + +P + + + V E + AGS +S+ G+LY+W
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNK 240
Query: 310 -GKLKNNGDDWMYPKPL--MDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGEL--- 362
G+L + P+ + + + SG H ++ +WG A YG+L
Sbjct: 241 HGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRT 300
Query: 363 -----GYGPYGQKSS--------AMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
G+ P Q SS ++P + L G V+CG H+L +V T
Sbjct: 301 LESPEGWKPKKQASSLPCSRPARSVPSSLPCLTG--ATEVSCGSEHNLAVVGGT 352
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR-----FVAAGCVSCHCVA 72
K G++L CGS + +G G P R ++++ +AAG H +A
Sbjct: 118 KNGQVLSCGSNSFGQLGVPHG--------PRRCVVPQAIEVQREKVVSIAAGLR--HALA 167
Query: 73 VDVEGRCYTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
G + WG +L G + P+ V+ L + AG H+ +
Sbjct: 168 ATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASL 227
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW---LSSVEGA 182
T+ G +G NKHGQL S + P P + A ++ W ++ E
Sbjct: 228 TDAGELYVWGSNKHGQLAS---QAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETG 284
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKD----SSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ G YGQLG ++ K SS+ + A+ P ++ L G T +V+CG+
Sbjct: 285 KVFTWGRADYGQLGRTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGAT--EVSCGS 342
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
H +AV G Y+WG+ +G G + + W P+ V + ++ L
Sbjct: 343 EHNLAVVG-GTCYSWGWNEHGMCGDGTEANVWTPKPVQALRSSSGL 387
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG-------------HGDKIQRDRP--TIVSELSKYK-I 112
H VA G+ +TWGR + GQLG + RP ++ S L
Sbjct: 276 HLVAQTETGKVFTWGRADYGQLGRTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGA 335
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGAD 171
+ G H + V G ++GWN+HG G G+ N P PV+ L S CGA
Sbjct: 336 TEVSCGSEHNLAVV-GGTCYSWGWNEHGMCGDGTEANVWTPKPVQALRSSSGLRLGCGAG 394
Query: 172 FTVWLSSVEGASILNAGLPQYGQ 194
++ L + LP GQ
Sbjct: 395 HSLALCQLP-------PLPALGQ 410
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++ WG YG+LG ++D +P+++ F + + I+ G +S+ G L++
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCV---KRITGGGGHSAIVTDQGSLFVC 73
Query: 310 GKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGEL 362
G K+ + +D +Y L G ++ + G + + + +S G +G+L
Sbjct: 74 GLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G P+G + +P+ +++ + V+S+A G H+L
Sbjct: 134 GV-PHGPRRCVVPQAIEV-QREKVVSIAAGLRHAL 166
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++P ++ LV +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYSSDALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S + ++ G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ + L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ LVS + A +D +L+ + + G G+LGHG
Sbjct: 481 DALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC + D SWG LG+G ++
Sbjct: 645 GCKTPKLVEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 41/264 (15%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ GK+ G + + CGST A+ GR + P
Sbjct: 536 LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P +V +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G +V +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
L ++G +++ L D+E N + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPEPAA 755
Query: 223 IAALAGETIVKVACGTNHTVAVDS 246
+ L + IV +ACG + A S
Sbjct: 756 LPGLDTKHIVGIACGPAQSFAWSS 779
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P A LA + ++AC
Sbjct: 443 PIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDALAPQLVQGLVSRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK V+ L+ + V+ V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDVVKVRCGSQFSVAL 673
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 147/346 (42%), Gaps = 81/346 (23%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
C+SC H V + Y +G N GQLG G K ++PT + L K+K A GR+H
Sbjct: 39 CLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTH 98
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T++ TE GN A G N GQLG G + + L+S T+ + +
Sbjct: 99 TIISTEGGNVYATGGNNEGQLGLG----DTDERDTFHLISFFTSQH-------KIKQLSA 147
Query: 182 ASILNAGLPQYGQL---GHGTDNEYNTKD-SSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S +A L + GQL G ++ + KD ++V + ++ G+ I ++CG
Sbjct: 148 GSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVT---------IGKPISWISCG 198
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
H+ V G +YT+G G+LG Q + +P+ V P+ VI
Sbjct: 199 YYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSI-------PDKVIQV--- 248
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
+C GGG H V + S ++G
Sbjct: 249 --AC--GGG-------------------------------------HTLVLTEESVYAFG 267
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Q+G+LG G + ++S PK ++ ++G +IS++CG H+ +I D
Sbjct: 268 LGQFGQLGLGTFIFETSE-PKVLEYVKGEKIISISCGENHTAMITD 312
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 126/318 (39%), Gaps = 78/318 (24%)
Query: 22 LLFCGSTCWDAVGR-RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
L GS W +G K A++ PT ++ L ++F A C H + G Y
Sbjct: 56 LYMFGSNNWGQLGLGSKAAVN----KPTCIKALKPEKVKF--AACGRTHTIISTEGGNVY 109
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
G N GQLG GD +RD ++S S++KIK+ AG + + +TEDG +G N
Sbjct: 110 ATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNTSAALTEDGQLFMWGDNSE 169
Query: 140 GQLGSGSIRNEIEPSPVRC----------------------------------------- 158
GQ+G + N P V
Sbjct: 170 GQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLL 229
Query: 159 -------LVS----EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
LVS +V ACG T+ L+ S+ GL Q+GQLG GT
Sbjct: 230 TNHRIPQLVSSIPDKVIQVACGGGHTLVLTE---ESVYAFGLGQFGQLGLGT-------- 278
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHRE 265
+E P+ + + GE I+ ++CG NHT + G +YT+G G +G+ LG
Sbjct: 279 ----FIFETS-EPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLEN 333
Query: 266 QKDEWVPRRVDVFQRNNV 283
+ + P VF + V
Sbjct: 334 FTNRFFPTPCSVFLKFMV 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLG G+ N +P I AL E + ACG HT+ G VY
Sbjct: 64 WGQLGLGSKAAVN--------------KPTCIKALKPEKVKFAACGRTHTIISTEGGNVY 109
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
G G+LG + + + F + + +SAGS S+ GQL+MWG
Sbjct: 110 ATGGNNEGQLGLGDTDERDTFHLISFFTSQHKI---KQLSAGSNTSAALTEDGQLFMWG- 165
Query: 312 LKNNGDDWMYPKPLMDLS-------GWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
+N + + K + ++ G + + G H FV D ++G ++ G+LG
Sbjct: 166 --DNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGKLG 223
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
+ +P+ V + VI VACG GH+LV+ + +
Sbjct: 224 LPSQLLTNHRIPQLVSSIPD-KVIQVACGGGHTLVLTEES 262
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4040 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4096
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4097 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4156
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +SS +G+ + G YG+
Sbjct: 4157 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSS-DGSMVWAFGDGDYGK 4215
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4216 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4261
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4262 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4317
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4318 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4351
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3992 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4048
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4107
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4108 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4153
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4154 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4179
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V +D S + ++G YG+LG G
Sbjct: 4180 ----------------LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTA 4223
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4224 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4251
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 152/378 (40%), Gaps = 81/378 (21%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEV------TATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G N+ S ++ L E +++ G+D + EG + + G YG
Sbjct: 433 GRLGLGDSNNQ---STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYG 488
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYT 252
+LGHG + Q P+ I L G+ +V V+ G H+ AV G +YT
Sbjct: 489 KLGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 253 WGFGGYGRLGHREQKDEWVP--------------------------RRVDVF-------- 278
WG G +GRLGH + +P R V F
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 279 ---QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM 320
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 595 GHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVS 713
Query: 380 ILEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 714 GLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E R +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIRKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4279 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4336
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4337 LQGKNVRQISAGRCHSAAWT 4356
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 124/271 (45%), Gaps = 29/271 (10%)
Query: 49 RLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ +P V I+ V A H +A+ G YTWG G LGHG + P ++
Sbjct: 125 QYKPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGP 184
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQLGSGS--IRNE---IEPSPVRCLVS 161
K +I AG SH+ VTE G +G ++ G+LG G+ I +E P+ V+ L
Sbjct: 185 WKDRIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV 244
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLAYEAQPRP 220
+ + CG FT+ L+ + + + G +LGHGT N + +P
Sbjct: 245 PIASVYCGGFFTMALT--KSGQLWSWGGNANHELGHGTRANNW---------------KP 287
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ +AAL T+V+VACG H A+ G V TWG+GG G+LGH ++ P V+
Sbjct: 288 KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMAD 347
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
I+ G ++ G LY WGK
Sbjct: 348 KTC----TYIACGPAWTAAITENGDLYTWGK 374
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 147/359 (40%), Gaps = 52/359 (14%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL----------------SKYKIKKAGA-- 117
E + WGR GQ+GHG + P ++S L +K ++ G
Sbjct: 34 ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G H+V+ E + +G G+LG + N+ +P V + V + G + L+
Sbjct: 94 GLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALT 151
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
V ++ G +G LGHG+ YE + PR + + IV V+ G
Sbjct: 152 EV--GNVYTWGYGAFGALGHGS--------------YERELLPRLLEGPWKDRIVHVSAG 195
Query: 238 TNHTVAVDSKGYVYTWGFG-GYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
+H+ AV G +YTWG G GRLGH + DE R Q +V P A + G
Sbjct: 196 GSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--PIASVYCGG 253
Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVG 346
+ GQL+ WG N+ ++W PK + L L + G H +
Sbjct: 254 FFTMALTKSGQLWSWGGNANHELGHGTRANNWK-PKVVAALEDVTLVQVACGGFHAAALT 312
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
D I+WG+ G+LG+G ++ P V+ + +ACG + I + ++
Sbjct: 313 QDGKVITWGYGGNGQLGHGTL--ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+G L PT+++ L D+ + C +A+ G+ ++WG N +LGHG + +
Sbjct: 230 EGALSRPTKVQAL---DVPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK 286
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P +V+ L + + G H +T+DG + +G+ +GQLG G++ N EP+ V +
Sbjct: 287 PKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346
Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ T ACG +T ++ E + G + QLG + V+
Sbjct: 347 DKTCTYIACGPAWTAAIT--ENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQF------- 397
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
P+A+ ++ V+CG NH V + S+
Sbjct: 398 PQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 106/253 (41%), Gaps = 27/253 (10%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRD-----RPTIVSELSKYKI 112
R V H AV G YTWGR+E G+LGHG+ D RPT V L I
Sbjct: 188 RIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPI 246
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
G T+ +T+ G ++G N + +LG G+ N +P V L + ACG
Sbjct: 247 ASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGF 306
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ + ++ G GQLGHGT E P + A+A +T
Sbjct: 307 HAAALT--QDGKVITWGYGGNGQLGHGT--------------LENGKEPAIVEAMADKTC 350
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAV- 289
+ACG T A+ G +YTWG +LG KDE + P V Q + P V
Sbjct: 351 TYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVL 410
Query: 290 -ISAGSVNSSCTA 301
+S G+ + C
Sbjct: 411 GVSCGANHGVCIV 423
>gi|50955670|ref|YP_062958.1| hypothetical protein Lxx21640 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952152|gb|AAT89853.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 596
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 152/365 (41%), Gaps = 57/365 (15%)
Query: 48 TRLR--PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
TRL+ P VGV V+AG +S + + D G Y WG NE GQLG GD + P V
Sbjct: 41 TRLQIGP-VGVTFTAVSAGSLSAYALGDD--GNVYAWGDNEYGQLGTGDTVNAHTPVKVM 97
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+ K AG + +DG++ A+G N++GQLG+G N +PV+ ++
Sbjct: 98 LPAGVKFTALSAGSLSAYALGDDGHAYAWGDNEYGQLGTGDTVN--AHTPVKVMLP---- 151
Query: 166 TACGADFTVWLSSVEGASILNA-------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
G FT S A + G YGQLG T T D+ V
Sbjct: 152 --AGVKFTALSSGGPSAYAVGNDGKTYAWGFNGYGQLGTDT-----TADAHV-------- 196
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P A+A AG + ++ G+ A+ + G Y WGF GYG+LG D VP V V
Sbjct: 197 -PVAVAVPAGVSFTTLSGGSLSAYALGNDGKTYAWGFNGYGQLGTDTTADAHVPVAVAV- 254
Query: 279 QRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDL 328
P V +SAG ++ + Y WG + GD + P +
Sbjct: 255 -------PAGVSFTAVSAGVSSAYALGDDRKTYAWGDNEYGQLGRGDTANAHAPVAVTVS 307
Query: 329 SGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+G + G + G + +WG YG+LG G ++ +++ G+ V
Sbjct: 308 AGETFVSVSGGAGSVYARGQNGDTYAWGDNDYGQLGRG----DTANAHTPIEVAAGVEVT 363
Query: 388 SVACG 392
V G
Sbjct: 364 GVLFG 368
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 114/279 (40%), Gaps = 33/279 (11%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P ++ GV ++AG +S + + D G Y WG NE GQLG GD + P
Sbjct: 89 NAHTPVKVMLPAGVKFTALSAGSLSAYALGDD--GHAYAWGDNEYGQLGTGDTVNAHTPV 146
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V + K +G V DG + A+G+N +GQLG+ + + P V
Sbjct: 147 KVMLPAGVKFTALSSGGPSAYAVGNDGKTYAWGFNGYGQLGTDTTADAHVPVAVAVPAGV 206
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T G + + +G + G YGQLG T T D+ V P A
Sbjct: 207 SFTTLSGGSLSAYALGNDGKT-YAWGFNGYGQLGTDT-----TADAHV---------PVA 251
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+A AG + V+ G + A+ Y WG YG+LG + + P V
Sbjct: 252 VAVPAGVSFTAVSAGVSSAYALGDDRKTYAWGDNEYGQLGRGDTANAHAPVAV------- 304
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
+SAG S + G G +Y G+ NGD + +
Sbjct: 305 ------TVSAGETFVSVSGGAGSVYARGQ---NGDTYAW 334
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
P+R++ L V I A G HC+AVD +GR Y WG NE GQ G G ++RD
Sbjct: 82 PSRVKALANVKITQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRD 139
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
K +++ AG +H+VV+T +G+ +G G I+ P V+ L
Sbjct: 140 IVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQIFVPVRVQGL 195
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V+ A GA L+ E +L G +YGQLG G +T+ +S
Sbjct: 196 -ENVSIIAVGAFHN--LALEEDGRLLAWGNNEYGQLGTG-----DTQPTS---------H 238
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDV 277
P + L T+V +A G H+ A+ KG VY WG G +GRLG ++ + VP++V++
Sbjct: 239 PVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 298
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+++ +S G +S G+++ +G+
Sbjct: 299 LAEEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ +V L Y ++ +G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E PS V+ L + ++T A G L+ + G +YGQ G
Sbjct: 70 LGHPPETKTENIPSRVKALANVKITQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCG--- 124
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E KD + P+ A T+ +VA G H+V + +G+V+TWG
Sbjct: 125 --EEPLKDEMGRPVRRDIVIPKRCAPKL--TVRQVAAGGTHSVVLTREGHVWTWG----- 175
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
W P +++ V R L ++I+ G+ ++ G+L WG +
Sbjct: 176 --------QPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQ 227
Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
GD +P P+ L L + +G H D WG ++G LG+G +
Sbjct: 228 LGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK 287
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S +P+KV++L +I V+CG HS+ +
Sbjct: 288 SSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 64/378 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAG 116
+R V +G S + +A+ +G +TWG N+RG LGH + + + P+ V L+ KI +A
Sbjct: 40 VRSVVSG--SRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAA 97
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
G H + V + G + A+G N++GQ G +++E+ PVR + V C TV
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMG-RPVRRDI--VIPKRCAPKLTV-- 152
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAALAG 228
+ AG GT + T++ V + P P + L
Sbjct: 153 ------RQVAAG---------GTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGL-- 195
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E + +A G H +A++ G + WG YG+LG + + P V ++
Sbjct: 196 ENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVD--- 252
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGN 340
I+AG +S+ G++Y WG+ + N+ M P+ + L+ ++ + G
Sbjct: 253 -IAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGG 311
Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL----EG------------ 383
H + D S+G +G LGYG + ++ P ++ I+ EG
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYGR--KVTTGQPLELPIMIPPPEGSFNHADEEEEGK 369
Query: 384 MHVISVACGYGHSLVIVD 401
+ACG H+L IV+
Sbjct: 370 WSAKWIACGGRHTLAIVE 387
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 107/270 (39%), Gaps = 45/270 (16%)
Query: 179 VEGASILNAGLPQYGQLGHGTDNE------------YNTK-------------DSSVKLA 213
V SI+ G + GQLG GT+ E Y+ + D
Sbjct: 2 VSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61
Query: 214 YEAQPR--------------PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ R P + ALA I + A G H +AVD +G Y WG YG
Sbjct: 62 WGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYG 121
Query: 260 RLGHREQKDEW-VPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNG 316
+ G KDE P R D+ P V ++AG +S G ++ WG+ G
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 181
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
D P+ N+ + G H+ + D ++WG+ +YG+LG G + ++ P
Sbjct: 182 DIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG--DTQPTSHP 239
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
V L+ + ++ +A G HS + D+ V
Sbjct: 240 VPVHGLDDLTLVDIAAGGWHSTALTDKGEV 269
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ P R++ L V I V A H +A++ +GR WG NE GQLG GD P
Sbjct: 185 QIFVPVRVQGLENVSIIAVGA----FHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPV 240
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV 160
V L + AG H+ +T+ G +G +HG+LG G +++ P V L
Sbjct: 241 PVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 300
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
E + +CG +V L+ I + G +G+LG+G T ++L P
Sbjct: 301 EEDIIQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIMIPP- 354
Query: 220 PRAIAALAGE------TIVKVACGTNHTVAV 244
P A E + +ACG HT+A+
Sbjct: 355 PEGSFNHADEEEEGKWSAKWIACGGRHTLAI 385
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 151/352 (42%), Gaps = 34/352 (9%)
Query: 58 IRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
+R A V+C H V GR +T+G N+ GQLG + RP V +L K+K
Sbjct: 33 VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
GR HT+V TE G FG N GQLG I + P V C + A A GAD +V
Sbjct: 93 VACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKALAAGADHSV 152
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + G GQLG G + + K + L+ + + ++ V
Sbjct: 153 ALTDDGELYVWGGG--SEGQLGLG---DIDDKSTPTLLSTDNK-------------VISV 194
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAG 293
ACG HT V G V+T+G G G+LG + V P++V++ ++ ++ G
Sbjct: 195 ACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAK------SVACG 248
Query: 294 SVNSSCTAGGGQLYMWGKLKN----NGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGA 347
++ G++Y +G+ N + + + Y P+ + + +G H V
Sbjct: 249 GSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTE 308
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
++G ++ +LG + P++ V V+CG H +V+
Sbjct: 309 KGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVL 360
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 128/296 (43%), Gaps = 39/296 (13%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G L G W +G + + +L+P ++ VA G + H + G
Sbjct: 55 GRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKP---EKVKVVACGRI--HTIVATESGCL 109
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YT+G N GQLG D + P V E + K AG H+V +T+DG +G
Sbjct: 110 YTFGANGDGQLGVEDIPSSNCPVKV-ECEPRQYKALAAGADHSVALTDDGELYVWGGGSE 168
Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
GQLG G I ++ P+ + ++V + ACG T +++ V + G G+LG GT
Sbjct: 169 GQLGLGDIDDKSTPT-LLSTDNKVISVACGYYHTAFVTDV--GEVFTFGEGDGGKLGQGT 225
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
D V + +A+ VACG +HTV + G VYT+G GG G
Sbjct: 226 DYGKAVAPKKVNIPEKAK---------------SVACGGSHTVVLTECGKVYTFGEGGNG 270
Query: 260 RLGHRE-----QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+LGH+ + W+ + V Q I+AG +++ GQLY +G
Sbjct: 271 QLGHKNKYFYCETPVWLNFKHKVTQ----------IAAGENHTALVTEKGQLYTFG 316
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 117/293 (39%), Gaps = 74/293 (25%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
K K G HT +VTE G FG N GQLG ++ P V+ L E V ACG
Sbjct: 37 KAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACG 96
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
T+ + E + G GQLG + + + VK+ E PR ALA
Sbjct: 97 RIHTIV--ATESGCLYTFGANGDGQLGV---EDIPSSNCPVKVECE----PRQYKALAA- 146
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
G +H+VA+ G +Y WG G G+LG + D+ P + N V+
Sbjct: 147 -------GADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLST--DNKVI----S 193
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
++ G +++ G+++ +G+ GD
Sbjct: 194 VACGYYHTAFVTDVGEVFTFGE----GDG------------------------------- 218
Query: 350 SCISWGHAQYGELGYGP-YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G YG+ + PKKV+I E SVACG H++V+ +
Sbjct: 219 ----------GKLGQGTDYGK--AVAPKKVNIPEKAK--SVACGGSHTVVLTE 257
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G+ VACG HT V G ++T+G +G+LG E K P V + V
Sbjct: 35 GDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKV---- 90
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL--------MDLSGWNLRCMDSG 339
V++ G +++ G LY +G NGD + + + ++ + + +G
Sbjct: 91 KVVACGRIHTIVATESGCLYTFGA---NGDGQLGVEDIPSSNCPVKVECEPRQYKALAAG 147
Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
H + D WG G+LG G KS+ D VISVACGY H+
Sbjct: 148 ADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTD----NKVISVACGYYHTAF 203
Query: 399 IVDRTNVGE 407
+ D VGE
Sbjct: 204 VTD---VGE 209
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDR 100
G V+P + V + + + C H V + G+ YT+G GQLGH +K +
Sbjct: 228 GKAVAPKK----VNIPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCET 283
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
P ++ K+K+ + AG +HT +VTE G FG +H +LG
Sbjct: 284 PVWLN--FKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLG 324
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 17/193 (8%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYK 111
L+ D + ++ C H V G +T+G + G+LG G D + P V+ K
Sbjct: 184 LLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVN--IPEK 241
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
K G SHTVV+TE G FG +GQLG + E +VT A G +
Sbjct: 242 AKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKVTQIAAGEN 301
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T ++ E + G ++ +L G D+E Y Q P+ + +
Sbjct: 302 HTALVT--EKGQLYTFGDGRHAKL--GLDHE----------CYSNQYFPQRSKRFSKFIV 347
Query: 232 VKVACGTNHTVAV 244
+V+CG H + +
Sbjct: 348 TQVSCGGCHMIVL 360
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 154/379 (40%), Gaps = 53/379 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P +V
Sbjct: 296 PKALESAVLLDVQTIA--CGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDG 353
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIE---PSPVRCLVS 161
L ++ G H+ VT G+ +G + H G LG RNE P + +
Sbjct: 354 LKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLG---YRNEASNWVPKKLNGPLE 410
Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V A +CG T ++S + G +G LGHG +T
Sbjct: 411 GIHVAAVSCGPWHTAVVTS--SGQLFTFGDGTFGVLGHGDRRSVST-------------- 454
Query: 220 PRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQK 267
PR + +L G V+ ACG HT AV S G ++TWG G GRLGH +++
Sbjct: 455 PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKE 514
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 515 SRLVPTCVAAL----VEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLP 570
Query: 323 KPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ LS + +D G H + + + +WG G LG+G +SS P V+
Sbjct: 571 VRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTIVEA 628
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ V SV CG + I
Sbjct: 629 LKDKQVKSVVCGTSFTAAI 647
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G V++WG GRLGH D P+ VD +
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLK 355
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKPLMDLSG 330
NV +++ G +S G LY WG +N +W+ K L G
Sbjct: 356 NTNV----ELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEG 411
Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V S ++G +G LG+G ++S + P++V+ L+G+ +
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DRRSVSTPREVESLKGLRTVRA 469
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 470 ACGVWHTAAVVE 481
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 146/363 (40%), Gaps = 54/363 (14%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V +G Y+WG G+LGHG +P ++ L+ I+ G HT
Sbjct: 316 ISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHT 375
Query: 123 VVVTEDGN-------SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
VT G+ + FG + HG S + + P+ + V++ +CG T
Sbjct: 376 CAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLN-GPLEGI--HVSSISCGPWHTAV 432
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++S + G +G LGHG + PR + +L G V+ A
Sbjct: 433 VTS--AGQLFTFGDGSFGVLGHGDRQSISV--------------PREVESLKGLRTVRAA 476
Query: 236 CGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
CG HT AV S G ++TWG G GRLGH +++ VP V V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASL----V 532
Query: 284 LPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
P ++ G + G +Y ++G+L N D M P + N S
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEIS 592
Query: 339 GNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+H + + + +WG G LG+G ++S P V+ L+ V SV CG +
Sbjct: 593 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS--PTLVEALKDKQVRSVVCGINFT 650
Query: 397 LVI 399
I
Sbjct: 651 AAI 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 105/259 (40%), Gaps = 35/259 (13%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P RL PL G+ + ++ C H V G+ +T+G G LGHGD+
Sbjct: 400 GNEVSHWMPKRLNGPLEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQS 457
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 458 ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 517
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+ P+ V LV ACG FTV L++ + G YGQLG+
Sbjct: 518 DKETRLVPTCVASLVEPNFCQVACGHCFTVALTT--SGHVYTMGSSVYGQLGNP------ 569
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
D V E + L + +++CG H + S+ VYTWG G GRLGH
Sbjct: 570 QADGMVPARVEGK--------LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Query: 265 EQKDEWVPRRVDVFQRNNV 283
+ D P V+ + V
Sbjct: 622 DTDDRNSPTLVEALKDKQV 640
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P+P A + ++CG H V +G VY+WG GRLGH D P+ +D
Sbjct: 302 PKPLEFAGRL--DVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDA 359
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLM-D 327
N+ +++ G ++ G LY WG L +G++ WM PK L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWM-PKRLNGP 414
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L G ++ + G H V + ++G +G LG+G ++S ++P++V+ L+G+
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSISVPREVESLKGLRT 472
Query: 387 ISVACGYGHSLVIVD 401
+ ACG H+ +V+
Sbjct: 473 VRAACGVWHTAAVVE 487
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 58 IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R V A C H AV G+ +TWG ++G+LGHGDK R PT V+
Sbjct: 470 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVA 529
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
L + + G TV +T G+ G + +GQLG+ G + +E + V
Sbjct: 530 SLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVE 589
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E++ CGA L+S + G G+LGHG ++ N+ P
Sbjct: 590 EIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGDTDDRNS--------------PT 630
Query: 222 AIAALAGETIVKVACGTNHTVAV 244
+ AL + + V CG N T A+
Sbjct: 631 LVEALKDKQVRSVVCGINFTAAI 653
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 24/234 (10%)
Query: 48 TRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL G+D + + C H VA+ +G+ + WG N GQLG ++ P +
Sbjct: 107 TVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQ 166
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + AG +H+ V++ G + FGW N GQLG G + P+ V+ L +
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK 224
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 225 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 268
Query: 223 IAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+A L G + +V CG +HT V V +Y++G G G+LG+ EQ + VP V
Sbjct: 269 VAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L G +G RK + SP L+ L G+ + ++AG H + + G
Sbjct: 137 GQLFVWGENAHGQLGLRKE--QALIQSPQHLQSLCGIPVAQISAG--GNHSFVLSLSGVV 192
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N GQLG GD R PTIV LS K G HT +++ G FG
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 252
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S+++E P V L S+V+ CG T+ L ++ I + G GQLG+G
Sbjct: 253 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTN-RIYSFGCGMQGQLGNG 311
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 26/193 (13%)
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G++ DK RP + L K+ + G H+V ++ DG +G N HGQLG
Sbjct: 98 GKVLLMDKYTVCRP--LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKE 155
Query: 148 RNEIE-PSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ I+ P ++ L V++++A F + LS V + G GQLG G
Sbjct: 156 QALIQSPQHLQSLCGIPVAQISAGG-NHSFVLSLSGV----VFGWGSNSAGQLGLG---- 206
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+T D V P + +L+G+ V ++CG HT + G V+T+G GG+G+LG
Sbjct: 207 -DTTDRFV---------PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG 256
Query: 263 HREQKDEWVPRRV 275
H KDE PR V
Sbjct: 257 HNSLKDEHHPRLV 269
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R + L ++++ACG H+VA+ + G ++ WG +G+LG R EQ P+ +
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHL---- 165
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
++ P A ISAG +S + G ++ WG L + D ++ P + LSG
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV-PTIVKSLSGKK 224
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ G H + + ++G +G+LG+ K P+ V L G V V C
Sbjct: 225 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHN--SLKDEHHPRLVAELWGSKVSQVTC 282
Query: 392 GYGHSLVIVDRTN 404
G H+LV+V TN
Sbjct: 283 GRHHTLVLVALTN 295
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT ++ L G + V+ C H + G +T+G GQLGH P +V+E
Sbjct: 214 PTIVKSLSGK--KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE 271
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L K+ + GR HT+V+ N + +FG GQLG+G + P PV +
Sbjct: 272 LWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV------LLP 325
Query: 166 TACGADFTV 174
T C +FT+
Sbjct: 326 TDCNCEFTM 334
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 149/350 (42%), Gaps = 44/350 (12%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
AL G V+ L P I+F + H +A+ +G Y WG N GQ+G R
Sbjct: 188 ALGGTTVT---LTPPATRGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLR 244
Query: 99 DRPTIVSELS----KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
P ++ + ++ AG ++ + DGN A+G N GQLG G+ N++ P
Sbjct: 245 QTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPV 304
Query: 155 PV---RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-----GTDNEYNTK 206
V + +E T T A + L+ ++ G YGQLG+ G+DN
Sbjct: 305 KVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNP---- 360
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
AY + +P ++ AG T +++ G H++A+ S +Y WG GRLG
Sbjct: 361 -----AAYSS--KPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTD 413
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN--NGDDW 319
+ P V V Q V + SAG + + G LY W G+L + N +D
Sbjct: 414 IQRFTP--VPVRQPAGVT--FSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDR 469
Query: 320 MYPKPLMDLSG------WNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
P + G W R M + +G+D + SWG +YG+LG
Sbjct: 470 RTPTLISPPDGASAGFTW-ARVMVRDDHVLAIGSDGNLYSWGLNEYGQLG 518
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 27/289 (9%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGH-------- 92
N ++P ++ GV F + H +A+ Y WG N GQLG+
Sbjct: 299 NKLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSD 358
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
+P +VS + + AGR H++ + D A+G N G+LG G+
Sbjct: 359 NPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFT 418
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
P PVR + D + + S G + G YG+LG G++ E + +
Sbjct: 419 PVPVRQPAGVTFSQFSAGDTSCFAISTNG-DLYAWGWNGYGRLGDGSNAEDRRTPTLIS- 476
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE--W 270
A AG T +V +H +A+ S G +Y+WG YG+LG ++ + +
Sbjct: 477 --------PPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSY 528
Query: 271 VPRRVDVFQRNNVLPPEAV---ISAGSVNSSCTAGGGQLYMWGKLKNNG 316
+ R V Q + + I+AG SS G LY WG NNG
Sbjct: 529 ISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWG--WNNG 575
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + GV ++AG H +A+ + + Y WG N G+LG G IQR P V +
Sbjct: 367 PVLVSTPAGVTFTQLSAG--RYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQ 424
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI----RNEIEPSP------- 155
+ + AG + ++ +G+ A+GWN +G+LG GS R SP
Sbjct: 425 PAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISPPDGASAG 484
Query: 156 ---VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
R +V + A G+D ++ + GL +YGQLG KD +
Sbjct: 485 FTWARVMVRDDHVLAIGSD----------GNLYSWGLNEYGQLG--------IKDINTDG 526
Query: 213 AYEAQPR--PRAIAALAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
+Y ++P ++ ++ A + T ++ G + A+ S G +YTWG+ G+LG D
Sbjct: 527 SYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWGWNNGGQLG-----DP 581
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
VP D Q + P ++A ++ TA + LK G +W P
Sbjct: 582 TVPIGTDNSQAMRLTP---SLAAFPLSPDVTAVKFDRTLGRDLKRAGTNWQVATP 633
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 147/382 (38%), Gaps = 43/382 (11%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L P IRF H +A+ +G Y+WG N+ GQLG G R P + + +
Sbjct: 753 LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTG 812
Query: 110 Y-KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI----RNEIEPSPVRC------ 158
+ + AG ++ + G+ A+G N GQLGS +I + SP+R
Sbjct: 813 VNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGM 872
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ T T A T L+ G ++G+LG T ++
Sbjct: 873 TATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITT--------- 923
Query: 219 RPRAIAALAGETI----VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
RP +A GET +V+ G +H++A D++G + WG G LG+
Sbjct: 924 RPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTT 983
Query: 275 VDVFQRNNVLPP----EAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM 326
V + P A I AGS +S G+++ WG N GD P M
Sbjct: 984 TPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSM 1043
Query: 327 DLSGWNLRCMD-------SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
N+ SGN + + + WG G LG G G S P K+
Sbjct: 1044 VAMPANVSTFTQLTGSRVSGNSLA-LDQNGNIWGWGQNSSGMLGTG--GTGSLNRPTKMS 1100
Query: 380 ILEGM-HVISVACGYGHSLVIV 400
G+ H + V G GH+L +
Sbjct: 1101 NPSGIDHFVKVCAGTGHTLAVA 1122
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 140/325 (43%), Gaps = 42/325 (12%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS--PVRCLVSEVTATAC 168
+ + AG H++ + DGN ++G NK+GQLG G+ + + P P V+ T +
Sbjct: 762 RFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSA 821
Query: 169 GADFTVWLSSVEG-ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAAL 226
G F++ +++G + GL GQLG N T SS AY + P R +A + +
Sbjct: 822 GTGFSL---ALDGQGHVWAWGLNSSGQLG---SNAIATNGSS---AYSSSPIRVQAPSGM 872
Query: 227 AGE--TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-----PRRVDVFQ 279
T+ ++ G H +AVD +G + WG +G+LG P +V Q
Sbjct: 873 TATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQ 932
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW---------MYPKPLM 326
A +SAG +S T G+ + WG +N N D + KP
Sbjct: 933 GETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGT 992
Query: 327 DLS-GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS----AMPKKVDI 380
+ S G+N + +G+ H D I SWG GELG G +++ AMP V
Sbjct: 993 NPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVST 1052
Query: 381 LEGMHVISVACGYGHSLVIVDRTNV 405
+ V+ G+SL + N+
Sbjct: 1053 FTQLTGSRVS---GNSLALDQNGNI 1074
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 68 CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--------AGR 119
H +A D +GR + WG N+ G LG+ + + T +K +G AG
Sbjct: 948 SHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGS 1007
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
H++ + + G ++G N +G+LG G PS V + T T S V
Sbjct: 1008 GHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTG------SRV 1061
Query: 180 EGASIL---NAGLPQYGQ-----LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ET 230
G S+ N + +GQ LG G N RP ++ +G +
Sbjct: 1062 SGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLN--------------RPTKMSNPSGIDH 1107
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
VKV GT HT+AV S G WG GRLG+ + + P V V + P V
Sbjct: 1108 FVKVCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSP--VSVLFPFRLGTPSTVQ 1165
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNN 315
G +S ++ G Q W L N
Sbjct: 1166 FGGVSGTSLSSTGQQDGAWTVLTPN 1190
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 123/297 (41%), Gaps = 41/297 (13%)
Query: 92 HGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
HG + T+ ++ K + +G +H++ + DG+ A+G N GQ+G S
Sbjct: 185 HGTALGGTTVTLTPPATRGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNS--TT 242
Query: 151 IEPSPVRC-----LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ +PV+ + T T A L+ ++ G GQLG GT
Sbjct: 243 LRQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTEN--- 299
Query: 206 KDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
KL P+P A ++ E T +V+ +HT+A+ S +Y WG+ GYG+LG+
Sbjct: 300 -----KLTPVKVPKP---AGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNT 351
Query: 265 EQKDEWVPRRVD---VFQRNNVL--PPEAV----ISAGSVNSSCTAGGGQLYMW-----G 310
VP D + VL P V +SAG +S QLY W G
Sbjct: 352 S-----VPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSG 406
Query: 311 KLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
+L + D + P P+ +G +G+ F + + +WG YG LG G
Sbjct: 407 RLGDGTDIQRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDG 463
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCV--SCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
AL+G +P + +P F A + S H +A+D GR ++WG N G+LG GD
Sbjct: 977 ALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTT 1036
Query: 97 QRDRPTIV---SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
R P++V + +S + +++ + ++GN +G N G LG+G
Sbjct: 1037 TRTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQNSSGMLGTG 1088
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4217
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P++V V + ++ G+ ++ A G +Y WG
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4319
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4320 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4225
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4281 PQQVPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGR 119
V C H +A+ + WG+N+ GQLG G D ++ P ++ L + AG
Sbjct: 1 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H+ V+T G +G NK GQLG + P+ ++ L ++ + CG D T L+
Sbjct: 61 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK 120
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G AG YGQLGH T +E N PR + L G + ++ACG
Sbjct: 121 EGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQIACG 163
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLG 262
HT A V S G +Y++G GG G+LG
Sbjct: 164 RQHTSAFVPSSGRIYSFGLGGNGQLG 189
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 41 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLK 98
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 99 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 158
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 159 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 192
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA 170
+ G H++ +++ +G NK+GQLG G + + P ++ L + + A GA
Sbjct: 2 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGA 61
Query: 171 -DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
F + LS +I G ++GQLG +N+ + P + +L +
Sbjct: 62 HSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYFPNLLKSLRTQ 103
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 104 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 149
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVI 290
V+VACG H++A+ V+ WG YG+LG + K + P+ + ++ + P +
Sbjct: 1 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLI----KSLLGIPFMQV 56
Query: 291 SAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH- 343
+AG +S G ++ WG+ K N+ +D +P L L + + G H
Sbjct: 57 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTA 116
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + ++G YG+LG+ + + P+KV L G V +ACG H+ V
Sbjct: 117 ALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQIACGRQHTSAFV 171
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 94 PNLLKSLRTQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 151
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 152 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 203
>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 432
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 154/366 (42%), Gaps = 82/366 (22%)
Query: 58 IRFVAAGCVSC------------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+R++ AG C H +AV +G Y++G N GQLGHG + RP +
Sbjct: 31 LRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIR 90
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL---GSGSIRNEIEPSPVRCLVSE 162
L +I +A AG T+++T+ G AFG + G+ G GS + I P V L +
Sbjct: 91 TLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGS-KTVIAPRLVESLKNI 149
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
A +F + S EG + G+LGH TD+ + +P P
Sbjct: 150 FVVQAAIGNFFTAVLSREG-RVYTFSWGSDGKLGHHTDSN------------DMEPHP-L 195
Query: 223 IAALAGETIVKVACGTNHTVAV---DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ AL +V++A G + + + S VY+ G G G+LGH + DE PR ++ FQ
Sbjct: 196 LGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQ 255
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
N+ P VISAG+ +++ G++ WG
Sbjct: 256 TLNLQP--MVISAGAWHAAVVGRDGRVCTWG----------------------------- 284
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG +YG LG+G ++ A PK VD L + + VA G + V+
Sbjct: 285 --------------WG--RYGCLGHG--NEECEAAPKVVDALTNVKAVHVATGDYTTFVV 326
Query: 400 VDRTNV 405
+ +V
Sbjct: 327 AEDGDV 332
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 53/295 (17%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
P +R L G+ I AAG + + + G+ Y +G++ G+ +G + + P +V
Sbjct: 86 PKPIRTLQGIRIIQAAAG--AGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLV 143
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L + +A G T V++ +G F W G+LG + N++EP P+ + ++
Sbjct: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIP 203
Query: 165 ATACGADFTVWLSSV---EGASILNAGLPQYGQLGHGTDN---------EYNTKDSSVKL 212
A + L G S+ + G G+LGHGT ++ T + +
Sbjct: 204 VVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMV 263
Query: 213 AY-------------------------------EAQPRPRAIAALAGETIVKVACGTNHT 241
E + P+ + AL V VA G T
Sbjct: 264 ISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTT 323
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
V G VY++G G LGH D R NVL PE V S +N
Sbjct: 324 FVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHA------NVLNPELVTSLKQIN 372
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 31/267 (11%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGR-CYTWGR 84
W + G+ D N + P PL+G + + +AAG C+A G Y+ G
Sbjct: 175 WGSDGKLGHHTDSNDMEP---HPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGC 231
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G+LGHG + P ++ + ++ AG H VV DG +GW ++G L
Sbjct: 232 GLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCL 291
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG--TD 200
G G+ E P V L + D+T ++ + +G + + G + LGH D
Sbjct: 292 GHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDG-DVYSFGCGESASLGHNAVID 350
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAAL--AGETIVKVACGTN-----HTVAVDSKGYVYTW 253
E N + + P + +L E +V+++ + HT A+ G +Y +
Sbjct: 351 AEGNRHANVLN--------PELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAF 402
Query: 254 GFGGYGRLGHR---EQKDEWVPRRVDV 277
G G G+LG Q + P +VD+
Sbjct: 403 GAGDKGQLGIELVANQTERVNPEQVDI 429
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 34/351 (9%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P R V +R V GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 71 SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G D
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGID-------------C 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
+ + ++ I G +++ G ++ +G+L +N + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A ACG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V VACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 79/222 (35%), Gaps = 64/222 (28%)
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+L G YGQLG G +E E PR + + V CG HTV
Sbjct: 1 MLCWGNASYGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVF 48
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
V G VYT G G+LGH + + + P +V N++ ++ G ++
Sbjct: 49 VLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIV----AVACGEAHTLALNDK 102
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
GQ+Y +WG G+LG
Sbjct: 103 GQVY---------------------------------------------AWGLDSDGQLG 117
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ +P+ + L + ++ VACGY HSL + + V
Sbjct: 118 LQG-SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 519 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 578
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 579 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 638
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ + + + G YG+LG G + T
Sbjct: 639 LVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKT-------- 690
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 691 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 744
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 745 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 777
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 523 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 573
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 574 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 628
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 629 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSD 686
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC ++ + D SWG LG+G ++
Sbjct: 687 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 742
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 743 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 773
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 544
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 605 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 661
Query: 345 VGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D+ + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 662 AVTDNGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 715
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D+ V C S +A+ +G+ Y+WG+ + +LGHG + P ++ L K+
Sbjct: 699 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 758
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
AG +H + +TED ++G N Q + EP+ + L + ACG A
Sbjct: 759 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 818
Query: 175 WLSSVE 180
W S E
Sbjct: 819 WSSCSE 824
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 41/264 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 578 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 637
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 697
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 698 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 744
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 745 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 797
Query: 223 IAALAGETIVKVACGTNHTVAVDS 246
+ L + IV +ACG + A S
Sbjct: 798 LPGLDTKHIVGIACGPAQSFAWSS 821
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
L +G++ GQ G GS I P P V + + V ACG + +V+L +E + G
Sbjct: 2 LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFL--LEDGEVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
L GQLGH ++ +P I ALAG+ IV VACG +H+VA+ +G
Sbjct: 60 LNTKGQLGHESEGS----------------KPELIGALAGQHIVHVACGESHSVALSDQG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V++WG G G+LG +D VPR + + +L IS G+ + A GQ +
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
WG+ L P+ + L G L + +G H F + S + WG
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG ++ P V +L V+ ++CG H+ V+
Sbjct: 220 GQLGLS--DERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG + GQ G G +Q P + + +K+ G +H+V + EDG G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S + +P + L + + ACG +V LS + + + G GQLG
Sbjct: 64 GQLGHESEGS--KPELIGALAGQHIVHVACGESHSVALS--DQGQVFSWGAGSDGQLGLT 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T +A PR I L +TI++++CG H +A+ + G +TWG Y
Sbjct: 120 TIE-------------DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG +E + P+RV P A ++AG +S + G ++ WGK ++G
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGI----PLAQVAAGGAHSFALSLSGAVFGWGK-NSSGQ 221
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
D P + L + + G H V S ++G G+LG+
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P++V L G V +ACG H+L V
Sbjct: 282 EVN--PRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 38/315 (12%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
V+C H V + +G YT G N +GQLGH + +P ++ L+ I G SH+
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPELIGALAGQHIVHVACGESHS 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
V +++ G ++G GQLG +I + + P ++ L + + +CG W L+
Sbjct: 97 VALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN----WHCLAL 152
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G YGQLG G + +Q P+ + +L G + +VA G
Sbjct: 153 AADGQFFTWGQNSYGQLGLGKEC-------------PSQASPQRVKSLDGIPLAQVAAGG 199
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ A+ G V+ WG G+LG +++D P V + + V+ IS G +++
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV----YISCGEEHTA 255
Query: 299 CTAGGGQLYMW-----GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
G ++ + G+L ++ +D + P+ +++L G + + G H FV +
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 351 CISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 316 IYAFGCGTRGQLGTG 330
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R++ L G+ + VAAG H A+ + G + WG+N GQLG D+ R+ P V
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
ACG T+ G I G GQLG G
Sbjct: 298 QIACGRHHTLAFVPSSGM-IYAFGCGTRGQLGTG 330
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 23/233 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTI 103
P + L G I VA G H VA+ +G+ ++WG GQLG D + P +
Sbjct: 75 PELIGALAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTV--PRL 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE 162
+ +L++ I + G H + + DG +G N +GQLG G ++ P V+ L
Sbjct: 131 IKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI 190
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
A + S+ GA + G GQLG + + + P
Sbjct: 191 PLAQVAAGGAHSFALSLSGA-VFGWGKNSSGQLGLSDERD--------------RESPCH 235
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L + +V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 236 VKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 232 SPCHVKLLRSQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVST-DGSMVWAFGDGDYGK 4217
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4319
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4320 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4353
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 137/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V D S + ++G YG+LG G
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTA 4225
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ V+ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLVEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ + LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLVEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4281 PQQIPVLAGVVIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP +V EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4047 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4103
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4104 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFG 4163
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4164 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4222
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4223 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4268
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4269 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4324
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4325 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4358
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3999 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4055
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4114
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +++++CG H+ V S G ++
Sbjct: 4115 YGKLGHGNSDR--------------QRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLF 4160
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4161 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4186
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4187 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4230
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4231 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4258
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ V+E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+ +
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVSED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+++
Sbjct: 4286 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4343
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4344 LQGKNIRQISAGRCHSAAWT 4363
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 51/365 (13%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY--KIKKAGAGRSHT 122
C H + + GR + G N+ GQLG G + I E+S + K+ + AG H+
Sbjct: 80 CGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPI--EVSGFDEKVVEVSAGNHHS 137
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLV-SEVTATACGADFTVWLSSV 179
VT DG A+G N GQLG G ++ +P V CL S V A G++ ++ ++
Sbjct: 138 CAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSI--ATT 195
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-EAQPRPRAIAALAGETIVKVACGT 238
E +L+ G G+LGHG K S + + ++ PR I L G I ++A G
Sbjct: 196 EEGEVLSWGAAGAGRLGHG------HKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGM 249
Query: 239 NHTVAVDSKGYVYTWGF---GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
H+ +D KG ++ +G G+GR G DE P V+ +P ++ G
Sbjct: 250 LHSACIDEKGTLFIFGQKTEKGFGRSG-----DELRPTVVE------EVPFSEEVACGGY 298
Query: 296 NSSCTAGGGQLYMWGKLKN-----NGDDW----------MYPKPLMDLS-GWNLRCMDSG 339
++ G LY WG +N G D ++ P+ +S GW + SG
Sbjct: 299 HTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG 358
Query: 340 NMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+ + GA+ + GH+ G+LG+G P V+ + + V+CG+ H+
Sbjct: 359 GDIYTWGWGGANGTFFEEGHSSGGQLGHG--NDVDYFEPMMVEFGKNARAVHVSCGFNHT 416
Query: 397 LVIVD 401
I +
Sbjct: 417 GAIFE 421
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 137/341 (40%), Gaps = 44/341 (12%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSEL--------SKYKIKKAGAGRSHTVVVTEDGNSLA 133
WG + G+LG G R PT G +HT+ +TE G A
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 134 FGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G N GQLG G S+ + +EP V +V + G + +++ + G
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTA--DGKLFAWGRNSS 154
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G K A + PR + LA + VA G+ H++A +G V +
Sbjct: 155 GQLGLG------------KRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLS 202
Query: 253 WGFGGYGRLGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
WG G GRLGH + E+ PR + + I+AG ++S+C
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKI----KRIAAGMLHSACIDEK 258
Query: 304 GQLYMWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
G L+++G+ G D + P + ++ + G H V DS SWG +
Sbjct: 259 GTLFIFGQKTEKGFGRSGDELRPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSNE 316
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G LG G S K + + V V+CG+ H+ VI
Sbjct: 317 NGCLGLGGTDMVRSPEVLKSSLFK-FPVSKVSCGWKHTAVI 356
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYM 308
WG G YGRLG + W P F P A ++ G ++ G+++
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 309 -----WGKLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHF-VGADSSCISWGHAQYG 360
+G+L G + +++SG++ + ++ +GN H V AD +WG G
Sbjct: 97 AGLNDFGQL-GIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSG 155
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+LG G K + P+KVD L V VA G HS+ + V
Sbjct: 156 QLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEV 200
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 48/262 (18%)
Query: 175 WLSSVEGASILNAGLP--------------QYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
W S A +L++G P YG+LG G ++ S + RP
Sbjct: 11 WRSQRRAARMLSSGEPAAGRRRVAALWGNGDYGRLGMGA---LESRWSPTACPFFLTGRP 67
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQ 279
+ +ACG HT+ + G V+ G +G+LG + P V F
Sbjct: 68 ---GDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD 124
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
V +SAG+ +S G+L+ WG+ K G P+ + L+
Sbjct: 125 EKVV-----EVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADS 179
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM----------PKKVDI 380
++ + G+ H + +SWG A G LG +G K+S + P+ +
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG---HGHKTSILGFSITTSEYTPRLIKN 236
Query: 381 LEGMHVISVACGYGHSLVIVDR 402
L+G+ + +A G HS I ++
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEK 258
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-AGAGRSHTVVVTE 127
H +A+ G Y+WG E G+LGHG+ + P ++ + K +I AG H+ +T+
Sbjct: 433 HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITK 492
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG+ +G +HG+LG G + P+ VR + + A G TV LS E ++
Sbjct: 493 DGDLYTWGEGEHGRLGHGDSSIQRVPTLVRS-IDAASQVAAGCSHTVVLSKDE-MTVWTF 550
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG + K+ Y P+ + AL G I K+A GT ++A+
Sbjct: 551 GAGDNGKLGHG----------NTKMEY----YPKIVDALKGIRIKKIAAGTQCSIALTWT 596
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G++Y WG G +G + +P+ V+ + +++ IS G + + ++Y
Sbjct: 597 GFIYVWGCGPCLGVGAADAV-HLLPKIVESLRDVHIVD----ISLGDCHCLALSADHEVY 651
Query: 308 MWGKLKNNGDDWM--------YPKPLMDLSGWNLRCMDSGNMHHF 344
WG N G + P ++ L G + + +G H F
Sbjct: 652 SWGN-NNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSF 695
Score = 88.6 bits (218), Expect = 7e-15, Method: Composition-based stats.
Identities = 84/334 (25%), Positives = 152/334 (45%), Gaps = 36/334 (10%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-----KIKKAGAGRSHTVVVTEDGN 130
+G + G+ G+LG GD + + +L+ + +I + SHT+ +T++G
Sbjct: 386 DGSLHACGKGSHGKLGLGDSSSKQ---CLHKLNLFNQNIDQISSSKGSDSHTLALTKNGV 442
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
++G + G+LG G++ + P +R + T A + + + G
Sbjct: 443 VYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEG 502
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS-KGY 249
++G+LGHG DSS+ Q P + ++ + +VA G +HTV + +
Sbjct: 503 EHGRLGHG--------DSSI------QRVPTLVRSIDAAS--QVAAGCSHTVVLSKDEMT 546
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+T+G G G+LGH K E+ P+ VD + + I+AG+ S G +Y+W
Sbjct: 547 VWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRI----KKIAAGTQCSIALTWTGFIYVW 602
Query: 310 GK---LKNNGDDWMY--PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
G L D ++ PK + L ++ + G+ H + AD SWG+ G+ G
Sbjct: 603 GCGPCLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCG 662
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G + ++P KV L+G+ + ++ G HS
Sbjct: 663 LG-HCFTPVSLPTKVLALDGIKIEQISTGTSHSF 695
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I F++AG S H A+ +G YTWG E G+LGHGD + PT+V + + A
Sbjct: 477 ITFISAG--SRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSID--AASQVAA 532
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G SHTVV+++D ++ FG +G+LG G+ + E P V L + A G ++
Sbjct: 533 GCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIA 592
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
L+ + G P G V A P+ + +L IV ++
Sbjct: 593 LTWTGFIYVWGCG-PCLG----------------VGAADAVHLLPKIVESLRDVHIVDIS 635
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGR--LGH 263
G H +A+ + VY+WG G+ LGH
Sbjct: 636 LGDCHCLALSADHEVYSWGNNNMGQCGLGH 665
Score = 75.5 bits (184), Expect = 7e-11, Method: Composition-based stats.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 61/343 (17%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGW 136
Y WG N QL G+K + I++ K A AG+ T + +DG+ A G
Sbjct: 340 YAWGSNSSHQLVEGNKDK-----ILTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGK 394
Query: 137 NKHGQLGSGSIRNEIEPSPVRCL---------VSEVTATACGADFTVWLSSVEGASILNA 187
HG+LG G + S +CL + +++++ T+ L+ + + +
Sbjct: 395 GSHGKLGLG------DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALT--KNGVVYSW 446
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDS 246
G ++G+LGHG Q P+ I + I ++ G+ H+ A+
Sbjct: 447 GDGEFGKLGHGN--------------VATQKLPKVIRGVFKNQIITFISAGSRHSAAITK 492
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
G +YTWG G +GRLGH + + VP R +D + V+ + + T G
Sbjct: 493 DGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGA 552
Query: 304 GQLYMWGKLKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
G GKL +G+ M YPK + L G ++ + +G S ++W Y
Sbjct: 553 GDN---GKL-GHGNTKMEYYPKIVDALKGIRIKKIAAGTQC------SIALTWTGFIY-V 601
Query: 362 LGYGPYGQKSSA-----MPKKVDILEGMHVISVACGYGHSLVI 399
G GP +A +PK V+ L +H++ ++ G H L +
Sbjct: 602 WGCGPCLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLAL 644
Score = 45.4 bits (106), Expect = 0.073, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GA D + P + L V I ++ G CHC+A+ + Y+WG N GQ G G
Sbjct: 611 GAADAVHLLPKIVESLRDVHIVDISLG--DCHCLALSADHEVYSWGNNNMGQCGLGHCFT 668
Query: 98 R-DRPTIVSELSKYKIKKAGAGRSHTVVVT 126
PT V L KI++ G SH+ T
Sbjct: 669 PVSLPTKVLALDGIKIEQISTGTSHSFAWT 698
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
+ C H +A+ G + WG+N GQLG G P V LS + + AG+
Sbjct: 109 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 168
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
+H++ ++ GN ++G N GQLG G E PS + L ++ V ACG T L++
Sbjct: 169 AHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTT 228
Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ G +YGQLGH T NE RPR + LAG + ++ACG
Sbjct: 229 --DGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 271
Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
HT+A V G V+++G G G+LG+ ++ +P + + N L E+ S +
Sbjct: 272 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSDKEL- 329
Query: 297 SSCTAGGGQ-LYMWGKLKN 314
AGG Q + +W + KN
Sbjct: 330 -VMIAGGNQSVLLWMEKKN 347
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G L ++ +P + L GV + ++AG H +A+ + G
Sbjct: 123 KGGELFAWGQNLHGQLG--VGRLFASIPTPQAVEHLSGVPLVQISAG--KAHSMALSMSG 178
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WGRN+ GQLG G D P+++ L +++ G SHT ++T DG FG
Sbjct: 179 NVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAG 238
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
K+GQLG S +NE+ P V L + VT ACG T+ S G + + G + GQLG
Sbjct: 239 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 297
Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
+ GT N+ S+ +L +E++ + + +AG
Sbjct: 298 NGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 334
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCL--VSEV 163
L + I + G H++ +++ G A+G N HGQLG G + I P V L V V
Sbjct: 103 LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLV 162
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRA 222
+A G ++ LS ++ + G GQLG G TD E P
Sbjct: 163 QISA-GKAHSMALSM--SGNVYSWGRNDLGQLGLGHTDGE---------------DFPSL 204
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
I L + + +ACG +HT + + G V+T+G G YG+LGH ++E PR V N
Sbjct: 205 IETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNR 264
Query: 283 V 283
V
Sbjct: 265 V 265
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
R L ++I+++ACG H++A+ G ++ WG +G+LG +P V
Sbjct: 98 RFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHL 156
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWN 332
+ V P ISAG +S + G +Y WG+ +G+D +P + L
Sbjct: 157 SGV--PLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FPSLIETLDNQQ 212
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G H + D ++G +YG+LG+ ++ P+ V L G V +AC
Sbjct: 213 VEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQIAC 270
Query: 392 GYGHSLVIV 400
G H+L V
Sbjct: 271 GRRHTLAYV 279
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
L +G++ GQ G GS I P P V + + V ACG + +V+L +E + G
Sbjct: 2 LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFL--LEDGEVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
L GQLGH ++ +P I ALAG+ IV VACG +H+VA+ +G
Sbjct: 60 LNTKGQLGHESEGS----------------KPEPIGALAGQHIVHVACGESHSVALSDQG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V++WG G G+LG +D VPR + + +L IS G+ + A GQ +
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
WG+ L P+ + L G L + +G H F + S + WG
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG ++ P V +L V+ ++CG H+ V+
Sbjct: 220 GQLGLS--DERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 145/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG + GQ G G +Q P + + +K+ G +H+V + EDG G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S + +P P+ L + + ACG +V LS + + + G GQLG
Sbjct: 64 GQLGHESEGS--KPEPIGALAGQHIVHVACGESHSVALS--DQGQVFSWGAGSDGQLGLT 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T +A PR I L +TI++++CG H +A+ + G +TWG Y
Sbjct: 120 TIE-------------DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG +E + P+RV P A ++AG +S + G ++ WGK ++G
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGI----PLAQVAAGGAHSFALSLSGAVFGWGK-NSSGQ 221
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
D P + L + + G H V S ++G G+LG+
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P++V L G V +ACG H+L V
Sbjct: 282 EVN--PRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R++ L G+ + VAAG H A+ + G + WG+N GQLG D+ R+ P V
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
ACG T+ G I G GQLG G
Sbjct: 298 QIACGRHHTLAFVPSSGM-IYAFGCGTRGQLGTG 330
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
V+C H V + +G YT G N +GQLGH + +P + L+ I G SH+
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHS 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
V +++ G ++G GQLG +I + + P ++ L + + +CG W L+
Sbjct: 97 VALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN----WHCLAL 152
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G YGQLG G + +Q P+ + +L G + +VA G
Sbjct: 153 AADGQFFTWGQNSYGQLGLGKEC-------------PSQASPQRVKSLDGIPLAQVAAGG 199
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ A+ G V+ WG G+LG +++D P V + + V+ IS G +++
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV----YISCGEEHTA 255
Query: 299 CTAGGGQLYMW-----GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
G ++ + G+L ++ +D + P+ +++L G + + G H FV +
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 351 CISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 316 IYAFGCGTRGQLGTG 330
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 23/233 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTI 103
P + L G I VA G H VA+ +G+ ++WG GQLG D + P +
Sbjct: 75 PEPIGALAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTV--PRL 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE 162
+ +L++ I + G H + + DG +G N +GQLG G ++ P V+ L
Sbjct: 131 IKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI 190
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
A + S+ GA + G GQLG + + + P
Sbjct: 191 PLAQVAAGGAHSFALSLSGA-VFGWGKNSSGQLGLSDERD--------------RESPCH 235
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ L + +V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 236 VKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 232 SPCHVKLLRSQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 31/328 (9%)
Query: 23 LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
++C GST + +G G D N++ P L + +A G H V + +G ++
Sbjct: 28 MYCWGSTVYGELGL-GGIEDENILMPRELDFQKATAVEQIACG--ETHTVLITKDGEVFS 84
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G N+ GQLGH +R + ++ L + K+A G SH+V V G +G N GQ
Sbjct: 85 CGNNDSGQLGHEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQ 142
Query: 142 LGSGS-IRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG G+ + P V+ L S V ACG T+ L++ + G GQLG G
Sbjct: 143 LGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN--NGELYAWGSNSDGQLGLGQ 200
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
D + T RP+ I LA I +ACG H++ V G V+ WG +G
Sbjct: 201 DVKIET-------------RPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFG 247
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNN 315
+LG + D++VP + + V + V + T GG M+G+L +
Sbjct: 248 QLGMNDISDKYVPCLLKTLRNAKV---KYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 304
Query: 316 GD-DWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + + P+ +++L G + + G H
Sbjct: 305 ANSNEILPRQIIELMGSVVTQISCGKRH 332
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 36/333 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK---IKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG G+LG G I+ + + EL K +++ G +HTV++T+DG + G
Sbjct: 29 YCWGSTVYGELGLGG-IEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGN 87
Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N GQLG ++ P + + + ACGA +V +++ + G GQL
Sbjct: 88 NDSGQLGHEKPTKRLQMIPGLDAFIFK--QAACGASHSVAVNN--WGQLFCWGSNADGQL 143
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GT + +A+ PR + AL +V++ACG HT+A+ + G +Y WG
Sbjct: 144 GLGT---------PLTIAH----TPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGS 190
Query: 256 GGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
G+LG ++ K E P+ + P A I+ G +S + G ++ WG+
Sbjct: 191 NSDGQLGLGQDVKIETRPKLITGLAT----IPIAFIACGGYHSIVVSKSGAVFGWGRNTF 246
Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
N+ D P L L ++ + G F+ D + G YG+LG+G
Sbjct: 247 GQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHG-- 304
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ +P+++ L G V ++CG H+L +V
Sbjct: 305 ANSNEILPRQIIELMGSVVTQISCGKRHTLALV 337
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L + I F+A G H + V G + WGRN GQLG D + P ++
Sbjct: 208 PKLITGLATIPIAFIACG--GYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKT 265
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
L K+K G +V +T DG G +GQLG G+ NEI P + L+ S VT
Sbjct: 266 LRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQ 325
Query: 166 TACGADFTVWLSSVEG 181
+CG T+ L G
Sbjct: 326 ISCGKRHTLALVPSRG 341
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 335 CMDSGNMH---HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
C+ + H + D++ WG YGELG G ++ MP+++D + V +AC
Sbjct: 9 CIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIAC 68
Query: 392 GYGHSLVI 399
G H+++I
Sbjct: 69 GETHTVLI 76
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 151/355 (42%), Gaps = 40/355 (11%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D V C H V G+ YT+G N+ GQLGHG+ +P++V +L K+
Sbjct: 34 DDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVA 93
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVW 175
GR+HT+ TE G+ +FG GQLG G + P + L V + ACG+DF+
Sbjct: 94 CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++ E + G GQ G G D E T +L + R V+
Sbjct: 154 IT--ENGELYTWGSCGEGQNGLGEDTEIPT-----RLHLHGKVR-------------MVS 193
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISA-G 293
CG H V G +Y G G+LG EQ D Q+ + + V++A G
Sbjct: 194 CGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLD-----NTSQLQKIKSIEDQVVVAACG 248
Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPK--PLMD-LSGWNLRCMDSGNMHH 343
+ ++ G +Y +G+ L ++ + +P+ PL + + + C +S
Sbjct: 249 AEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGES--FTA 306
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ + ++G ++G+LG G ++ P+KV V V CG H LV
Sbjct: 307 VITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHMLV 361
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G L CG +G LD + ++L+ + ++ + V A C + V G
Sbjct: 206 GSLYMCGEKEGGKLGLDHEQLD----NTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSV 261
Query: 80 YTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
YT+G+ +GQLG G ++ + P + K K + G S T V+T+ GN FG +
Sbjct: 262 YTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGR 321
Query: 139 HGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
HG+LG G N +P V+ +FTV + + G +L A
Sbjct: 322 HGKLGLGDECFSNTFKPEKVKRF----------NNFTVKMVTCGGCHMLVA 362
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 34/351 (9%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P + V +R V GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIEC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
+ + ++ I G +++ G ++ +G+L +N + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 77/223 (34%), Gaps = 66/223 (29%)
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+L G YGQLG G +E E PR + + V CG HTV
Sbjct: 1 MLCWGNASYGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVF 48
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
V G VYT G G+LGH + + + PE V++
Sbjct: 49 VLDDGTVYTCGCNDLGQLGHEKSRKK----------------PEQVVA------------ 80
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
L N+ + G H D + +WG G+L
Sbjct: 81 ------------------------LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G ++ +P+ + L + ++ VACGY HSL + + V
Sbjct: 117 GLQG-SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
>gi|440905239|gb|ELR55645.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Bos grunniens mutus]
Length = 338
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 135/318 (42%), Gaps = 55/318 (17%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGN 130
AV + WG N GQLG G K +S+ K IK+ G H+ VVT++G+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
G NK GQLG G + +P + L+ + ACG DFT+ L+ E +L+ G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILT--ENGQVLSCGS 127
Query: 190 PQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVA 243
+GQLG HG PR P+AI L E +V +A G H +A
Sbjct: 128 NSFGQLGVPHG-------------------PRRCVIPQAIELLR-EKVVSIAAGLRHALA 167
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSC 299
+ G V+ WG G G R + +P + + + V E + AGS +S+
Sbjct: 168 ATASGTVFQWG-TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSAS 226
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM-------HHFVGA 347
G+LY+W G+L + + P+ + RC + + H V
Sbjct: 227 LTDAGELYVWGSNKHGQLASQAAFLLLPQRI------EARCFQNEKIAAVWSGWTHLVAQ 280
Query: 348 DSS--CISWGHAQYGELG 363
+ +WG A YG+LG
Sbjct: 281 TVTGKVFTWGRADYGQLG 298
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 102/276 (36%), Gaps = 66/276 (23%)
Query: 60 FVAAGCVS------CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F +GC+ H V EG + G N+ GQLG G + T L I+
Sbjct: 45 FCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQ 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----------- 162
+ G T+++TE+G L+ G N GQLG + P RC++ +
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLG-------VPHGPRRCVIPQAIELLREKVVS 157
Query: 163 --------VTATACGADF-------------------TVWLSSVEGASILNAGLPQYGQL 195
+ ATA G F ++L++ E +++ Q +
Sbjct: 158 IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 196 GHGTDNEYNTKDS--------------SVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
G+D+ + D+ + + A+ P+ E I V G H
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHL 277
Query: 242 VAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVD 276
VA G V+TWG YG+LG E ++ W + D
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQD 313
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4217
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P++V V + ++ G+ ++ A G +Y WG
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4319
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4320 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4353
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4225
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4281 PQQVPVLAGVVIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4339 LQGKNVRQISAGRCHSAAWT 4358
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 2689 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 2745
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 2746 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2805
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 2806 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 2864
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 2865 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2910
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 2911 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 2966
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 2967 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 3000
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 2641 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 2697
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 2756
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 2757 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 2802
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 2803 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 2828
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 2829 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 2872
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 2873 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 2900
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 2928 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2985
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 2986 LQGKNIRQISAGRCHSAAWT 3005
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLSLSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +++ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4280 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTI 103
T LRP + ++ R V HC+++ + Y WG N GQ G G+ +P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 104 VSELSKYKIKKAGAGRSHTVVVT 126
VS L I++ AG SH++ T
Sbjct: 712 VSGLDGIAIQQISAGTSHSLAWT 734
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 34/329 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +++ G GR HT + EDG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLALN--DKGQVFSWGLGSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N + +++ PR I +L+ + +VACG H++A+ G++++WG Y
Sbjct: 118 ----LNNFEECIRV-------PRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + VP+ + Q P A I+AG +S G ++ WG+ K
Sbjct: 167 GQLGLGMTGQSISVPQHLQSLQG----IPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D +P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P+KV L G V +ACG H+L
Sbjct: 283 VN--PRKVFELMGNVVTQIACGRQHTLAF 309
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
D++ C H +A+ G ++WG+N GQLG G Q P + L +
Sbjct: 136 DVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ +T G +G NK GQLG + P+ ++ L S+ V +CG D T
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ G AG YGQLGH + N + PR + L G + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EVNPRKVFELMGNVVTQI 299
Query: 235 ACGTNHTVAVD-SKGYVYTWGFGGYGRLGHR 264
ACG HT+A S G + ++G GG G+LG R
Sbjct: 300 ACGRQHTLAFTPSSGKMDSFGLGGNGQLGTR 330
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 53 LVGVDIRF-VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKY 110
+V +D + VA C H +A++ +G+ ++WG GQLG + + R P + LS
Sbjct: 78 VVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDV 137
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL--VSEVTATA 167
++ + G H++ +++ G+ ++G N++GQLG G I P ++ L + A
Sbjct: 138 QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAA 197
Query: 168 CGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
GA F + LS ++ G ++GQLG N+ + P + AL
Sbjct: 198 GGAHSFALTLS----GAVFGWGRNKFGQLGLNDTND--------------RCFPALLKAL 239
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ ++ ++CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 240 RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV 288
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 33/344 (9%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
+V P + G +R V GC H + +G YT G N+ GQLGH R +P
Sbjct: 22 VVEPRKCEFFHGKRVRDV--GCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKS--RKKPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
V L I G SHT+ + + G ++G GQLG + I P ++ L
Sbjct: 78 VVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDV 137
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG ++ LS +G I + G +YGQLG G + S+ + P+
Sbjct: 138 QVAQVACGYWHSLALS--KGGHIFSWGQNRYGQLGLGMTGQ------SISV-------PQ 182
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L G ++A G H+ A+ G V+ WG +G+LG + D P + +
Sbjct: 183 HLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQ 242
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRC 335
V+ IS G +++ G ++ +G+L +N + + P+ + +L G +
Sbjct: 243 RVI----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQ 298
Query: 336 MDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKK 377
+ G H SS S+G G+LG + S P K
Sbjct: 299 IACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGG + G + +G G ++ P L+ L G+ +AAG H A+ + G
Sbjct: 154 KGGHIFSWGQNRYGQLGL--GMTGQSISVPQHLQSLQGIPFAQIAAG--GAHSFALTLSG 209
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+ WGRN+ GQLG D R P ++ L ++ G HT +T++G FG
Sbjct: 210 AVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAG 269
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+GQLG S +E+ P V L+ + VT ACG T+ + G + + GL GQLG
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSG-KMDSFGLGGNGQLG 328
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4028 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4084
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4085 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4203
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4204 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4250 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4305
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4306 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4339
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3980 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4036
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4095
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4096 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4141
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4167
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4168 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4211
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4212 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4239
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++++ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ + G Q G G + +++ RP+ I LA
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
G+LG+G + PK ++ L+GM + V G
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4267 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4324
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4325 LQGKNIRQISAGRCHSAAWT 4344
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +++ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 112/426 (26%), Positives = 179/426 (42%), Gaps = 79/426 (18%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + H + +++ G+ + WG N+ GQLG GD + P I+S AG H++
Sbjct: 1640 CGNSHTMVINMSGQVFVWGANQTGQLGLGD----NSPQILS-----------AGYEHSIA 1684
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGAS 183
+T+ N L + W G G G+++ + P + S++ CG TV ++ A
Sbjct: 1685 ITKS-NEL-YIWGSGGLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEA- 1741
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA--QPR---PRAIAALAGETIVKVACGT 238
+ GL + GQLG + + VKL +P+ P+ I L G I +VACG
Sbjct: 1742 -YSWGLTEGGQLGL-------PQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGE 1793
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP----RRVDVF--QRNNVLPPEAV--I 290
H++A+ G +Y WG YG+LG D + P + V+ Q N L E + I
Sbjct: 1794 AHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKI 1853
Query: 291 SAGSVNSSCTAGGGQLYMWG----------------------KLK----NNGDDWMYPKP 324
G+ + G LY G K+K N D + P
Sbjct: 1854 ICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTR 1913
Query: 325 LMDLSGWNLRCMDSGNMHHF-VGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
++ G + + G H V D + +WG + G+LG G K + P+ V L
Sbjct: 1914 VICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLN--PRPVQSL 1971
Query: 382 EGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAK 441
+ +ACG HS+ ++ TN Q+ +Y + S NE+I +N V +G A
Sbjct: 1972 CSSQIQRIACGSMHSVALIGDTN------QISIYSTQFYSS-NEQI-KNYYVQDIRGLAN 2023
Query: 442 VSNNSK 447
N +
Sbjct: 2024 NWQNEQ 2029
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 81/319 (25%), Positives = 132/319 (41%), Gaps = 40/319 (12%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL------------GHGDKIQRDRPTIVSE 106
+ + A C H VAV + Y+WG E GQL G GD+ Q P + +
Sbjct: 1721 KILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPK 1780
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI------------EPS 154
L +I + G +H++ +T+DG +G + +GQLG G + EP
Sbjct: 1781 LEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQ 1840
Query: 155 PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS--SVK 211
+ L E ++ CGA FT++ + + G+ GQLG T E S VK
Sbjct: 1841 EINGLKHEKISKIICGATFTLF--QTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVK 1898
Query: 212 LAYEAQPR----PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY--GRLGHRE 265
Q P + G I ++ACG +H++AV G W +G + G+LG E
Sbjct: 1899 KGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGE 1958
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWGKLKNNGDDWMYPKP 324
+ PR V + + I+ GS++S G Q+ ++ + ++ +
Sbjct: 1959 VTMKLNPRPVQSLCSSQI----QRIACGSMHSVALIGDTNQISIYSTQFYSSNEQIKNYY 2014
Query: 325 LMDLSGWNLRCMDSGNMHH 343
+ D+ G + NMH
Sbjct: 2015 VQDIRGLANNWQNEQNMHQ 2033
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 50/238 (21%)
Query: 184 ILNAGLPQYGQLGH---GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G GQLG D+++++ S+K+ Y PR I +L E I +V CG +H
Sbjct: 1590 LFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLY-----PRMIISLKDEVIREVCCGNSH 1644
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T+ ++ G V+ WG G+LG + + ++SAG +S
Sbjct: 1645 TMVINMSGQVFVWGANQTGQLGLGDNSPQ-------------------ILSAGYEHSIAI 1685
Query: 301 AGGGQLYMWGK--------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
+LY+WG LK P + + + G +H V D
Sbjct: 1686 TKSNELYIWGSGGLCGIGTLKQQN----APVKIDFFNKSKILTAVCGGLHTVAVTKDWEA 1741
Query: 352 ISWGHAQYGELGY----------GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG + G+LG G + P+++ LEG+ + VACG HS+ +
Sbjct: 1742 YSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAM 1799
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 51/235 (21%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---------- 93
+++P R+ L G+ I VA C H +A+ +G Y WG++ GQLG G
Sbjct: 1772 VLTPQRIPKLEGLQIAQVA--CGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGL 1829
Query: 94 --DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
+K + P ++ L KI K G + T+ T+ G+ G N GQLG + E+
Sbjct: 1830 GMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEM 1889
Query: 152 E--------------------PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA-GL 189
+ P+ V C + ACG ++ +S +G ++L A G+
Sbjct: 1890 QIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSG-DGMNMLWAWGM 1948
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ GQLG G + ++KL PR + +L I ++ACG+ H+VA+
Sbjct: 1949 FKNGQLGLG--------EVTMKL------NPRPVQSLCSSQIQRIACGSMHSVAL 1989
Score = 45.4 bits (106), Expect = 0.077, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR--CYTWGRNERG 88
+ V + K +++ PTR+ G+ I +A C H +AV +G + WG + G
Sbjct: 1895 EKVKKGKHNQTSDVILPTRVICFQGIAIHQIA--CGESHSLAVSGDGMNMLWAWGMFKNG 1952
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
QLG G+ + P V L +I++ G H+V + D N ++
Sbjct: 1953 QLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALIGDTNQIS 1997
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 38/303 (12%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4134 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4190
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4191 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4250
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4251 NGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVST-DGSMVWAFGDGDYGK 4309
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4310 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4355
Query: 255 FG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G R +R Q+ VP VF + I+ G+ ++ + G +Y
Sbjct: 4356 QDRLIGLPEGRARNHNRPQQ---VPALSGVFVED--------IAVGAEHTLALSASGDVY 4404
Query: 308 MWG 310
WG
Sbjct: 4405 AWG 4407
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 41/284 (14%)
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEP--SPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
+ +G +HGQL RN + P SP C +V CG + T + + ++L
Sbjct: 4089 DVFLWGAGRHGQLAEAG-RNAVSPPPSPSFCQAQQVI---CGQNCTFVIQA--NGTVLAC 4142
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAV 244
G YG+LG G ++ + I+AL G + ++ +CG++ H++A+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLT--------------VISALQGFVVTQLVTSCGSDGHSMAL 4188
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V++WG G YG+LGH + PR+++ Q V+ +S G +S+ G
Sbjct: 4189 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTADG 4244
Query: 305 QLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--G 355
+L+ +G L N + + P+ + L G+ + + G H V + + W G
Sbjct: 4245 KLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFG 4303
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
YG+LG G KSS P+KVDIL G+ + VACG S+ +
Sbjct: 4304 DGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVAL 4345
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 129/303 (42%), Gaps = 34/303 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 588
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 589 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 634
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 635 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 689
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W H
Sbjct: 690 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW-H 748
Query: 357 AQY 359
Y
Sbjct: 749 RPY 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 377 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 434
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 435 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 491
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 492 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 537
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 538 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 597
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 598 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 657
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 658 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 716
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 717 LDGVAIQQISAGTSHSL 733
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 509 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 564
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 565 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 624
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 625 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 667
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 668 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 701
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
VV+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 369 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 425
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 426 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 474
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 475 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 531
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 532 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 589
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 590 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 637
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV + +A G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4373 PQQVPALSGVFVEDIAVG--AEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTS 4430
Query: 107 LSKYKIKKAGAGRSHT 122
L +++ AGR H+
Sbjct: 4431 LQGKSVRQISAGRCHS 4446
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 582 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 639
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 640 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 697
Query: 141 QLGSGS 146
Q G G+
Sbjct: 698 QCGQGN 703
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 161/380 (42%), Gaps = 49/380 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D++ +A G H V +G +TWG G+LGHG RP
Sbjct: 253 DVLTPKPLETNVVLDVQQIACGVR--HIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPH 310
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCL 159
+V L+ + G HT +T + +G +N G LG G+ + P V
Sbjct: 311 LVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRVVGS 369
Query: 160 VS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ +V + ACG W S++ ++ + G YG LGHG D E + Y
Sbjct: 370 LEGLQVLSVACGT----WHSALATSNGKLYTFGDGTYGVLGHG-DRE--------SVVY- 415
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHRE 265
PR + L+G +KVACG HT A+ S ++TWG G RLGH
Sbjct: 416 ----PREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGN 471
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
++ +P V N + ++ + T G M +G+L N D +
Sbjct: 472 KETYLLPTCVSSLIDYNF---HQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVI 528
Query: 322 PKPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P + D L G + + G H V + + SWG G LG+G + + P ++
Sbjct: 529 PCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKA--PTLIE 586
Query: 380 ILEGMHVISVACGYGHSLVI 399
L+ HV S++CG + I
Sbjct: 587 ALKDRHVKSISCGSNFTASI 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 142/342 (41%), Gaps = 40/342 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
+++ G H +VT G +G G+LG G R+ P V L VS V ACG
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGE 327
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T ++S G+ G LGHGTD + P+ R + +L G
Sbjct: 328 YHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWI------------PK-RVVGSLEGLQ 374
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-------RNNV 283
++ VACGT H+ S G +YT+G G YG LGH +++ PR V + V
Sbjct: 375 VLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGV 434
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMD 337
A++ S S +L+ WG +L + N + ++ P + L +N +
Sbjct: 435 WHTAAIVEVMSQTGS-NMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLA 493
Query: 338 SG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
G NM + + G YG+LG P +P V D L G V ++CG H
Sbjct: 494 CGHNMTVALTTSGHVFTMGGTAYGQLG-NP--SSDGVIPCLVQDRLVGEFVEEISCGAYH 550
Query: 396 SLVIVDRTNVGE-------RLDQLDVYDGKASSQDNEEIDRN 430
++V+ R V RL DV D KA + DR+
Sbjct: 551 TVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRH 592
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 159/377 (42%), Gaps = 50/377 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 323 PKALESAVVLDVQNIA--CGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDA 380
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
LS I+ G HT VT G+ +G +N +G LG G+ + P V +
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYN-YGLLGHGNQVSHWVPKRVNGPLEGI 439
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V+ +CG T ++S + G +G LGHG SV L PR
Sbjct: 440 HVSYISCGPWHTAVVTS--AGQLFTFGDGTFGALGHGDRK-------SVSL-------PR 483
Query: 222 AIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDE 269
+ +L G ++ +CG HT AV S G ++TWG G GRLGH +++ +
Sbjct: 484 EVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543
Query: 270 WVPRRVDVFQRN--NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK---- 323
VP V + + N V ++ A + + A G +Y G+L N D P
Sbjct: 544 LVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVY--GQLGNPQADGKLPTRVEG 601
Query: 324 PLMDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
L+ + C G H + + +WG G LG+G +++ P VD L+
Sbjct: 602 KLLKSFVEEIAC---GAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNN--PTLVDALK 656
Query: 383 GMHVISVACGYGHSLVI 399
HV S+ACG + I
Sbjct: 657 DKHVKSIACGTNFTAAI 673
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G +++WG GRLGH D P+ +D
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G+ W+ + L G
Sbjct: 383 NTNI----ELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEG 438
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G +KS ++P++V+ L+G+ +
Sbjct: 439 IHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG--DRKSVSLPREVESLKGLRTMRA 496
Query: 390 ACGYGHSLVIVD 401
+CG H+ +V+
Sbjct: 497 SCGVWHTAAVVE 508
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGR 78
G + GS + +G + DG L PTR+ L+ + +A C + H + +
Sbjct: 573 GHVYAMGSPVYGQLGNPQA--DGKL--PTRVEGKLLKSFVEEIA--CGAYHVAVLTLRNE 626
Query: 79 CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
YTWG+ G+LGHGD R+ PT+V L +K G + T +
Sbjct: 627 VYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4046 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4102
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4103 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4162
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4221
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4222 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ + V+ + ++ G+ ++ A G +Y WG
Sbjct: 4268 QDRLIGLPEGRARNHNRPQQIPLLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4323
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4324 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4357
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3998 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4054
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4113
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4114 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4159
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4185
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4186 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4229
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4230 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4257
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ +S G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----VSIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4285 PQQIPLLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4342
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4343 LQGKNVRQISAGRCHSAAWT 4362
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|255569510|ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
gi|223535022|gb|EEF36705.1| conserved hypothetical protein [Ricinus communis]
Length = 1050
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 118/283 (41%), Gaps = 50/283 (17%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L I+ V+A H +AV G YTWG G+LGH D I + +++
Sbjct: 178 PCKVDALHSSLIKLVSAA--KFHSIAVSAHGEVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++K A + HTV+ TE G +G N+ GQLG ++ + P V L
Sbjct: 236 PRQLTSGLGSRRVKAIAAAKHHTVLATESGEVFTWGSNREGQLGY-TVDTQPTPRRVSSL 294
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S + A A T +S + + G + GQLG+GT N +
Sbjct: 295 KSRIIAVAAANKHTAVVS--DSGEVFTWGCNKEGQLGYGTSNSASNYT------------ 340
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PR + L G+T VA HT+ + + G VYTW GHR PRRV +
Sbjct: 341 PRVVEYLKGKTFKGVAAAKYHTIVLGADGEVYTW--------GHRLV----TPRRVVIAR 388
Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
F R L A I+AG V+S G L+ W
Sbjct: 389 NLKKSGNSPLKFHRMERL-HVASIAAGMVHSLALTDDGALFYW 430
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 119/298 (39%), Gaps = 34/298 (11%)
Query: 118 GRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G H V TE F W + QLG+G+ + P V L S + A F
Sbjct: 146 GDGHDSVTTE-----VFSWGSGANYQLGTGNAHLQKLPCKVDALHSSLIKLVSAAKFHSI 200
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-V 234
S G + G + G+LGH D + A PR + + G VK +
Sbjct: 201 AVSAHG-EVYTWGFGRGGRLGH--------PDFDIHSGQAAVITPRQLTSGLGSRRVKAI 251
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
A +HTV G V+TWG G+LG+ PRRV + + ++A +
Sbjct: 252 AAAKHHTVLATESGEVFTWGSNREGQLGYTVDTQP-TPRRVSSLKSRII-----AVAAAN 305
Query: 295 VNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV- 345
+++ + G+++ WG K +N P+ + L G + + + H V
Sbjct: 306 KHTAVVSDSGEVFTWGCNKEGQLGYGTSNSASNYTPRVVEYLKGKTFKGVAAAKYHTIVL 365
Query: 346 GADSSCISWGHAQYG--ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
GAD +WGH + +KS P K +E +HV S+A G HSL + D
Sbjct: 366 GADGEVYTWGHRLVTPRRVVIARNLKKSGNSPLKFHRMERLHVASIAAGMVHSLALTD 423
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 36 RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-- 93
R+G L + + R + + R +A + H V G +TWG N+ GQLG+G
Sbjct: 274 REGQLGYTVDTQPTPRRVSSLKSRIIAVAAANKHTAVVSDSGEVFTWGCNKEGQLGYGTS 333
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+ P +V L K A + HT+V+ DG +G
Sbjct: 334 NSASNYTPRVVEYLKGKTFKGVAAAKYHTIVLGADGEVYTWG 375
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 32/262 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKA 115
D + C H + +D + Y++G + G LG+ + I +L+ K K +
Sbjct: 20 DKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNE---HLEDVKIPQQLNLKQKFVQV 76
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA--TACGADFT 173
G +H++ +T G ++G N GQLG G+ + ++P V + +++ A CG +
Sbjct: 77 ACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV--IQNDIIAEYIDCGDQHS 134
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
++S + + G QY +LGHG T D + P+ + L +
Sbjct: 135 AFVS--KNKELYTWGNGQYYRLGHGV-----TTDELI---------PKKVVVLEDYYVTH 178
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-KDEWVPRRVDV----FQRNNVLPPEA 288
V+CG NHT+ V +G+VY WG G YG+LG E K + +P RV + F++N +
Sbjct: 179 VSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQ-- 236
Query: 289 VISAGSVNSSCTAGGGQLYMWG 310
++AGS++S + GQ++ WG
Sbjct: 237 -VAAGSMHSLALSTNGQIFTWG 257
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 20/183 (10%)
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L + I+ +ACG +HT+ +D +Y++G G G LG+ +D +P+++++ Q+
Sbjct: 18 LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQK----- 72
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK-LK-----NNGDDWMYPKPLM--DLSGWNLRCMD 337
++ G+ +S G ++ WGK L+ N +D + PK ++ D+ +D
Sbjct: 73 -FVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIA---EYID 128
Query: 338 SGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+ H FV + +WG+ QY LG+G +PKKV +LE +V V+CG H+
Sbjct: 129 CGDQHSAFVSKNKELYTWGNGQYYRLGHGV--TTDELIPKKVVVLEDYYVTHVSCGMNHT 186
Query: 397 LVI 399
L++
Sbjct: 187 LIV 189
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 36 RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
+ G L + ++ + + +FV C + H +A+ + G ++WG+N RGQLGHG++
Sbjct: 49 KTGLLGNEHLEDVKIPQQLNLKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQ 108
Query: 96 IQRDRPTIVSE---LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
+P V + +++Y G H+ V+++ +G ++ +LG G +E+
Sbjct: 109 NDCLKPKEVIQNDIIAEY----IDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELI 164
Query: 153 PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSV 210
P V L VT +CG + T+ V G + A G YG+LG D + T + V
Sbjct: 165 PKKVVVLEDYYVTHVSCGMNHTLI---VTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRV 221
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQK 267
+ + + + +VA G+ H++A+ + G ++TWG G LG +++ +
Sbjct: 222 GMICKKFRKNKMYY--------QVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQ 273
Query: 268 DEWV-PRRVDV 277
D + P+++ +
Sbjct: 274 DYYTQPQKISI 284
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 19/222 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
P +++ IR+++ C H +A+ +G+ Y WG+N QLG G + P +
Sbjct: 419 PFQIQYFKNNIIRYIS--CSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQ 476
Query: 106 ELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
+ + K I + + ++T+ G FG + G LG + P P + ++
Sbjct: 477 GILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQM 536
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLG---HGTD---NEYNTKDSSVKLAYEAQ 217
ACG V +S+ + G YGQLG + T+ NEY+ +D + K Q
Sbjct: 537 IYIACGPQGMVSISA-HKRQLYAWGNNIYGQLGIKIYRTEMNVNEYD-EDKNGKQQNNEQ 594
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+P + I V G H+VA+D+ G +Y+ G Y
Sbjct: 595 IKPEEVQ------IKSVDMGMFHSVAIDNNGKIYSCGLRIYS 630
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 29/225 (12%)
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVR 157
+RP + I+ H + +++ G + +G N + QLG G S P ++
Sbjct: 417 NRPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQ 476
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
++ + +AC F+ L+ + + G G LGH N Y
Sbjct: 477 GILETKTIIMSACSDKFSALLT--DKGEVWTFGTSDCGVLGHQEKN------------YY 522
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDS-KGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P P+ + + ++ +ACG V++ + K +Y WG YG+LG + + E
Sbjct: 523 VVPEPKMVNDIP--QMIYIACGPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNE 580
Query: 275 VD-----VFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
D Q N + PE V + G +S G++Y G
Sbjct: 581 YDEDKNGKQQNNEQIKPEEVQIKSVDMGMFHSVAIDNNGKIYSCG 625
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4010 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4066
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4067 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4126
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4127 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4185
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4186 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4231
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4232 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4287
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4288 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4321
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3962 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4018
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4077
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4078 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4123
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4124 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4149
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4150 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4193
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4194 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4221
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4249 PQQIPVLAGVVIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4306
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4307 LQGKNIRQISAGRCHSAAWT 4326
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|115496664|ref|NP_001069489.1| secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
gi|117940126|sp|Q3MHW0.1|SRGEF_BOVIN RecName: Full=Secretion-regulating guanine nucleotide exchange
factor
gi|75773727|gb|AAI04611.1| Secretion regulating guanine nucleotide exchange factor [Bos
taurus]
gi|296480129|tpg|DAA22244.1| TPA: secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
Length = 464
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 149/371 (40%), Gaps = 73/371 (19%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGN 130
AV + WG N GQLG G K +S+ K IK+ G H+ VVT++G+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
G NK GQLG G + +P + L+ + ACG DFT+ L+ E +L+ G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILT--ENGQVLSCGS 127
Query: 190 PQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVA 243
+GQLG HG PR P+AI L E +V +A G H +A
Sbjct: 128 NSFGQLGVPHG-------------------PRRCVIPQAIELLR-EKVVSIAAGLRHALA 167
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSC 299
+ G V+ WG G G R + +P + + + V E + AGS +S+
Sbjct: 168 ATASGTVFQWGT-GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSAS 226
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM-------HHFVGA 347
G+LY+W G+L + + P+ + RC + + H V
Sbjct: 227 LTDAGELYVWGSNKHGQLASQAAFLLLPQRI------EARCFQNEKIAAVWSGWTHLVAQ 280
Query: 348 DSS--CISWGHAQYGELGYG----------------PYGQKSSAMPKKVDILEGMHVISV 389
+ +WG A YG+LG P P + L G IS
Sbjct: 281 TVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEIS- 339
Query: 390 ACGYGHSLVIV 400
CG H+L ++
Sbjct: 340 -CGSEHNLAVI 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++L CGS + +G G V P + L+ + +AAG H +A G
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPR--RCVIPQAIE-LLREKVVSIAAGLR--HALAATASGTV 174
Query: 80 YTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ WG +L G + P+ V+ L + AG H+ +T+ G
Sbjct: 175 FQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELY 234
Query: 133 AFGWNKHGQLGSGS----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+G NKHGQL S + + IE RC +E A A + +T ++ + G
Sbjct: 235 VWGSNKHGQLASQAAFLLLPQRIE---ARCFQNEKIA-AVWSGWTHLVAQTVTGKVFTWG 290
Query: 189 LPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
YGQLG + E +D S+ + + P + L G T +++CG+ H +AV
Sbjct: 291 RADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGAT--EISCGSEHNLAV 348
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G ++WG+ +G G + D W P+ V
Sbjct: 349 IG-GVCHSWGWNEHGMCGDGTEADVWAPKPV 378
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 151/371 (40%), Gaps = 54/371 (14%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK------- 111
R V C H + + YT+G E G+LGHG + P V +
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304
Query: 112 --IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
+ GR HT+VVT +G+ FGW + G+LG+G + + PS R + + A ACG
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPS--RVDLRNIAAVACG 1362
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ T+ L+S AG G+LG+G++ + + P + L
Sbjct: 1363 REHTLALTSKGRVFAFGAGFG--GRLGNGSETD--------------EELPFLVEGLEEY 1406
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEA 288
+IV +A G H+ A+ G V TWGFG G LGH + + +P VD + NV E
Sbjct: 1407 SIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNV---ET 1463
Query: 289 VISAGSVNSSCTAGG---------GQLYMWGKLK--NNGDDWMYPKPLMDLSGWNLRCMD 337
+I SV +S G G LY WG G + + + L+ LS +R
Sbjct: 1464 LIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPT 1523
Query: 338 SGNMH-----HFVGADSS----CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
S + F A S WG G G A K+V +L
Sbjct: 1524 SSGIRGIACGTFTSAVCSTQGQLFMWGSPAAGN---GAPLDVEDAHVKRVGVLGEFEFSQ 1580
Query: 389 VACGYGHSLVI 399
+ACG H++ I
Sbjct: 1581 IACGAYHAVAI 1591
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 31/238 (13%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERG 88
W GR G+ + P+R VD+R +AA C H +A+ +GR + +G G
Sbjct: 1331 WGEAGRLGTGETGSSLYPSR------VDLRNIAAVACGREHTLALTSKGRVFAFGAGFGG 1384
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
+LG+G + + P +V L +Y I AG H+ ++ DG L +G+ G LG G+
Sbjct: 1385 RLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRD 1444
Query: 149 NEIEPSP---------VRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
N + P+ V L +S VT+ ACG+ T L++ + G GQLG
Sbjct: 1445 NCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHT--LAATNDGVLYGWGDAAAGQLG 1502
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
E+ + V L+ P+ I I +ACGT + ++G ++ WG
Sbjct: 1503 ----AEHLSAQDLVVLS------PKEIRLPTSSGIRGIACGTFTSAVCSTQGQLFMWG 1550
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--------ELSKYKI 112
+AAG CH A+ +G TWG G LGHG + PT+V E + I
Sbjct: 1411 IAAG--ECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDI 1468
Query: 113 K---KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE----IEPSPVRCLVSE-VT 164
G HT+ T DG +G GQLG+ + + + P +R S +
Sbjct: 1469 SVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIR 1528
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG FT + S +G L +G G + +D+ VK +
Sbjct: 1529 GIACGT-FTSAVCSTQGQ------LFMWGSPAAGNGAPLDVEDAHVK----------RVG 1571
Query: 225 ALAGETIVKVACGTNHTVAVDSK 247
L ++ACG H VA+ K
Sbjct: 1572 VLGEFEFSQIACGAYHAVAITRK 1594
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4217
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4319
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4320 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4225
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4253
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4281 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4339 LQGKNVRQISAGRCHSAAWT 4358
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG 188
L +G GQLG G I E+ P RC E V CG TV+L +E ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFL--LEDGTVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLGH +A+ +P + +L + IV V+CG HT+A++ KG
Sbjct: 60 CNDLGQLGHE----------------KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
V+ WG G G+LG +D VPR V ++ ++ G +S A GG+++
Sbjct: 104 QVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHI----TQVACGYWHSLALARGGEIF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG+ L G P+ + L G + +G H F + + WG ++
Sbjct: 160 SWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKF 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+LG G P + L V+ + CG H+
Sbjct: 220 GQLGLG--DNDDRRFPVLLKTLRSQQVVYICCGEDHT 254
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +++ G GR HTV + EDG G N
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R + P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKARKK--PEQVVSLDAQNIVAVSCGEAHTLALN--DKGQVFAWGLGSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ + + PR + +L+ I +VACG H++A+ G +++WG Y
Sbjct: 118 -----------LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKY 166
Query: 259 GRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG +Q P+ + Q P ISAG +S G ++ WG+ K
Sbjct: 167 GQLGLGQQGACVCSPQVIQSLQG----IPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
+ DD +P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+L +
Sbjct: 283 VN--PRKVFELMGSVVSQIACGRQHTLAFI 310
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 125/317 (39%), Gaps = 65/317 (20%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
L+ P R G +R V GC H V + +G YT G N+ GQLGH R +P
Sbjct: 22 LLEPRRCEFFEGKRVRDV--GCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQ 77
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
V L I G +HT+ + + G A+G GQLG + + + P V+ L
Sbjct: 78 VVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV 137
Query: 162 EVTATACGADFTVW--LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+T ACG W L+ G I + G +YGQLG G ++ + + P
Sbjct: 138 HITQVACG----YWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQ-SLQGIPF 192
Query: 220 ----------------------------------------PRAIAALAGETIVKVACGTN 239
P + L + +V + CG +
Sbjct: 193 GQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGED 252
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ----------RNNVLPPEAV 289
HT A+ +G V+T+G GGYG+LGH E PR+V R + L +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTL--AFI 310
Query: 290 ISAGSVNSSCTAGGGQL 306
S+G ++S G GQL
Sbjct: 311 PSSGKIDSFGLGGNGQL 327
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 18 KGGELLFCGSTCWDAVGR-RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
+GGE+ G + +G ++GA + SP ++ L G+ ++AG H + +
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGAC---VCSPQVIQSLQGIPFGQISAG--GAHSFGLTLS 208
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G + WGRN+ GQLG GD R P ++ L ++ G HT +T++G FG
Sbjct: 209 GAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGA 268
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+GQLG S +E+ P V L+ S V+ ACG T+ G I + GL GQL
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSG-KIDSFGLGGNGQL 327
Query: 196 G 196
G
Sbjct: 328 G 328
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 152/378 (40%), Gaps = 46/378 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +VA G H + + +TWG G+LGHG +P
Sbjct: 249 DILVPKPLESNVMLDVSYVACGVK--HAALITRQAEVFTWGEECSGRLGHGAGTSIFQPR 306
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PV 156
++ LS ++ G HT VT G+ +G H G LG GS + P P+
Sbjct: 307 LLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPL 366
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L +V+ +CG T ++S + G +G LGHG E
Sbjct: 367 EGL--QVSTVSCGTWHTALITS--SGQLYTFGDGTFGALGHGNR--------------ET 408
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ- 266
P+ + +L G + V+CG H+ AV S G ++TWG G RLGH ++
Sbjct: 409 ISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRS 468
Query: 267 ---KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
K VP +D + I + T G ++G+L N +D YP+
Sbjct: 469 AKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSS---VYGQLGNPNNDGRYPR 525
Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ D G + +H ++ +WG G LG+G + +P V+ L
Sbjct: 526 LVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRK--VPTLVEAL 583
Query: 382 EGMHVISVACGYGHSLVI 399
V +ACG + I
Sbjct: 584 RDRSVKRIACGSSFTAAI 601
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 34/207 (16%)
Query: 58 IRFVAAGCVSCHCVAVDVE----------GRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+R ++ C H AV VE G+ +TWG ++ +LGHGD+ + +PT V L
Sbjct: 421 LRTISVSCGVWHSAAV-VEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSL 479
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVSEV 163
Y K+ G + T+ +T G+ G + +GQLG+ G +E + V
Sbjct: 480 IDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRYPRLVED---KVGGGGV 536
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG+ L++ + G G+LGHG + D V P +
Sbjct: 537 VEVACGSYHVAVLTNT--GEVYTWGKGANGRLGHG-----DIADRKV---------PTLV 580
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYV 250
AL ++ ++ACG++ T A+ +V
Sbjct: 581 EALRDRSVKRIACGSSFTAAISQHKWV 607
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 127/317 (40%), Gaps = 47/317 (14%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
+ G H ++T +G G+LG G+ + +P + L + V ACG
Sbjct: 264 VSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGE 323
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T +++ G G LGHG+ + P+ R L G
Sbjct: 324 FHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWI------------PK-RVSGPLEGLQ 370
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-------RNNV 283
+ V+CGT HT + S G +YT+G G +G LGH ++ P+ V+ + V
Sbjct: 371 VSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGV 430
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW----------MYPKPLMDLSGWNL 333
AV+ + + A G+L+ WG +GD + + P + L +N
Sbjct: 431 WHSAAVVEV--IMTQSNASSGKLFTWG----DGDKYRLGHGDRSAKLKPTCVPSLIDYNF 484
Query: 334 RCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVA 390
G+ +G +S + G + YG+LG P P+ V D + G V+ VA
Sbjct: 485 HKSACGHT-LTIGLTTSGHMFTVGSSVYGQLG-NP--NNDGRYPRLVEDKVGGGGVVEVA 540
Query: 391 CGYGHSLVIVDRTNVGE 407
CG H V+ TN GE
Sbjct: 541 CGSYHVAVL---TNTGE 554
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLSLSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +++ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4280 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTI 103
T LRP + ++ R V HC+++ + Y WG N GQ G G+ +P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 104 VSELSKYKIKKAGAGRSHTVVVT 126
VS L I++ AG SH++ T
Sbjct: 712 VSGLDGIAIQQISAGTSHSLAWT 734
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLSLSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +++ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4280 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTI 103
T LRP + ++ R V HC+++ + Y WG N GQ G G+ +P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 104 VSELSKYKIKKAGAGRSHTVVVT 126
VS L I++ AG SH++ T
Sbjct: 712 VSGLDGIAIQQISAGTSHSLAWT 734
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 37/325 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ + AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQ 305
G VY WG G G E P+ ++ ++ IS G +S C A +
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIG--DSXCLALRHDNE 685
Query: 306 LYMWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISW 354
+Y WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCD 770
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 151/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + LS + AG+ T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ V + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P V L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G + +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQ 699
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK V+ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D+ +A C S H V +G + WG G+LGHG + P +V
Sbjct: 271 PKALQAAVVLDVSSIA--CGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQA 328
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEP----SPVRCLV 160
L+ + G HT VT G +G + G +G + + P SP+ +
Sbjct: 329 LAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV- 387
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+++ ACGA T +SS + G +G LGHG P
Sbjct: 388 -RISSIACGAWHTALVSS--AGQLFTFGDGTFGVLGHGDKRNLAI--------------P 430
Query: 221 RAIAALAGETIVKVACGTNHTVAVD------------SKGYVYTWGFGGYGRLGHREQKD 268
+ + +L G V+ ACG HT AV S G ++TWG G RLGH +++
Sbjct: 431 KEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQ 490
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKP 324
+ VP V N V S+ + T G M +G+L N D P
Sbjct: 491 KLVPTCVAALVDYNF---RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPG- 546
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
++D + G H V A SS +WG G LG+G +++ P V+ L
Sbjct: 547 MVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTA--PTLVEAL 604
Query: 382 EGMHVISVACGYGHSLVI 399
V +VACG + VI
Sbjct: 605 RDKQVKTVACGSSFTAVI 622
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ A + +ACG+ H V +G V+ WG GRLGH D P+ V
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
N +++ G ++ G+LY WG +G WM + L G
Sbjct: 331 GVNT----ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEG 386
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H V + ++G +G LG+G +++ A+PK+V+ L+G+ +
Sbjct: 387 VRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHG--DKRNLAIPKEVESLKGLKTVRA 444
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 445 ACGIWHTAAVVE 456
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 94/219 (42%), Gaps = 39/219 (17%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE-------------GRCYTWGRNERGQ 89
NL P + L G ++ V A C H AV VE G+ +TWG ++ +
Sbjct: 426 NLAIPKEVESLKG--LKTVRAACGIWHTAAV-VEVIVGYSSATSCSSGKLFTWGDGDKYR 482
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK Q+ PT V+ L Y ++ G S TV +T G G +GQLG+ G
Sbjct: 483 LGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADG 542
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ ++ R V E+ CGA LSS I G G+LGHG D E T
Sbjct: 543 KVPGMVDGELARTFVEEI---GCGAHHVAALSS--KTEIYTWGKGANGRLGHG-DVEDRT 596
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + VACG++ T +
Sbjct: 597 A-------------PTLVEALRDKQVKTVACGSSFTAVI 622
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG ++ PS + L ++ V ACG T L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258
Query: 177 SSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A LAG + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELAGNRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
CG HT+A V G V+++G G G+LG+ +D+ +P + V
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV 344
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 29/227 (12%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L G+ + ++AG H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTAPQIVEHLAGIPLAQISAG--EAHSMALSMSG 210
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG +D P+++ L K++ G SHT ++T+DG FG
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAG 270
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELAGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKE 325
Query: 193 GQLGHGTDNEYNTKDSSVKLA----------YEAQPRPRAIAALAGE 229
GQLG+G T+D + L +E+ + + +AGE
Sbjct: 326 GQLGNG-----GTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGE 367
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G ++GQLG + +KDS P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGL---DHTESKDS-----------PSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
AL + + +ACG +HT + G ++T+G G +G+LGH ++E P
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 41/278 (14%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
KI G H ++++ DG + L SI E ++ CG
Sbjct: 98 KIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++ LS +G + G +GQLG G + + P+ + LAG
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTAPQIVEHLAGIP 192
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEA 288
+ +++ G H++A+ G +Y+WG +G+LG H E KD P ++ V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDS--PSLIEALDNQKV----E 246
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ G +++ G L+ +G K N+ + + P + +L+G + + G H
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306
Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+V S+G + G+LG G + +P KV
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV 344
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLA 189
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
P A ISAG +S + G +Y WGK + ++ + P + L +
Sbjct: 190 G----IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKV 245
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + D ++G ++G+LG+ ++ P V L G V +ACG
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELAGNRVTQIACG 303
Query: 393 YGHSLVIV 400
H+L V
Sbjct: 304 RWHTLAYV 311
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 70/331 (21%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3981 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4037
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4096
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4097 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4142
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV TA G Y G+
Sbjct: 4143 TFGNGDYGRLGLGNTSNKKLPERV------------------------TALEG--YQIGQ 4176
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF--VGADSSCI-SWGHAQYGELGYGPYG 368
+N ++ C + ++H V AD S + ++G YG+LG G
Sbjct: 4177 ARNK----------------SIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4221 AKSS--PQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4029 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4085
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4086 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4145
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL----------VSEVTATACGADFTVWLSSVEGASIL 185
+G+LG G+ N+ P V L S + + ACG + T+ +S+ +G+ +
Sbjct: 4146 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSA-DGSMVW 4204
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G YG+LG G A+ P+ + L G I KVACGT +VA+
Sbjct: 4205 AFGDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G VYT+G L ++ P++V V + ++ G+ ++ G
Sbjct: 4251 KDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALTSTGD 4306
Query: 306 LYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+Y WG + + P + L G N+R + +G H
Sbjct: 4307 IYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4349
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++++ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + V+ G HSL
Sbjct: 715 LDGIAIQQVSAGTSHSL 731
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ + G Q G G + +++ RP+ I LA
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
G+LG+G + PK ++ L+GM + V G
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4277 PQQVPVLAGVVIEDVAVG--AEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4335 LQGKNVRQISAGRCHSAAWT 4354
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +++ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4032 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4088
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4089 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4148
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4149 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4207
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4208 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4253
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4254 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4309
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4310 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3984 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4040
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4099
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4100 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4145
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4146 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4171
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4172 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4215
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4216 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4243
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4271 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4328
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4329 LQGKNVRQISAGRCHSAAWT 4348
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4035 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4091
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4092 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4210
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4211 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4257 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4312
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4313 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4346
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3987 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4043
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4102
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4103 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4148
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4174
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4175 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4218
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4219 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4246
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++++ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ + G Q G G + +++ RP+ I LA
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
G+LG+G + PK ++ L+GM + V G
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4274 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4331
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4332 LQGKNIRQISAGRCHSAAWT 4351
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +++ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 143/355 (40%), Gaps = 69/355 (19%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P ++ G + +A G + H +A+ G WG N G+LG G R+ P V+
Sbjct: 129 TPVAVKLPTGTTVTAIAVG--TFHTLALTSTGALLAWGGNGFGELGDGTTTARNEPVPVN 186
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
+ I GR H++ +T G LA+G N GQLG G+ N P V + VT
Sbjct: 187 VPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVT 246
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A A G + L+S ++L GL GQ+G GT T D S + + P
Sbjct: 247 AIAGGGSNSFALTSA--GTVLAWGLNSSGQVGDGT-----TTDRSTPVDVDLPP------ 293
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
G T+ +A G H+VA+ S G V WG G+LG D P V+ L
Sbjct: 294 ---GTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVN-------L 343
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
PP+ I+A TA G + L + G
Sbjct: 344 PPDTTITA------ITAHDGSHSL--ALTSTG---------------------------- 367
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ ++WG GELG G +S+ P V++ G V ++ G HS+ +
Sbjct: 368 -----TILAWGLNSSGELGDGTTTNRST--PVDVNLPPGTTVTAIDNGDDHSMAL 415
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 127/323 (39%), Gaps = 68/323 (21%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
TWG N+ GQLG G I P V + I +++ +T G LA+G N
Sbjct: 55 TVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNN 114
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G+ + P V+ + VTA A G T+ L+S ++L G +G+LG
Sbjct: 115 TGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTST--GALLAWGGNGFGELG 172
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
GT N P + AG TI +A G H++A+ S G V WG
Sbjct: 173 DGTTTARN--------------EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKN 218
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
G+LG + P VD LPP ++A AGGG
Sbjct: 219 NEGQLGDGTNANSTTPVDVD-------LPPGTTVTA-------IAGGGS----------- 253
Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
N + S + ++WG G++G G +S+ P
Sbjct: 254 ---------------NSFALTSAG---------TVLAWGLNSSGQVGDGTTTDRST--PV 287
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
VD+ G V ++A G GHS+ +
Sbjct: 288 DVDLPPGTTVTAIAGGEGHSVAL 310
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 18/208 (8%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+ N +P + G + +A G + A+ G WG N GQ+G G R
Sbjct: 228 NANSTTPVDVDLPPGTTVTAIAGG--GSNSFALTSAGTVLAWGLNSSGQVGDGTTTDRST 285
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P V + G H+V +T G LA+G N GQLG G+ + P V L
Sbjct: 286 PVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVN-LP 344
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ T TA A D + L+ +IL GL G+LG GT +T
Sbjct: 345 PDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRST-------------- 390
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
P + G T+ + G +H++A+ +
Sbjct: 391 PVDVNLPPGTTVTAIDNGDDHSMALTAP 418
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H + +G + WG N QLG+G Q P +VS L K+ + G H++ +T+
Sbjct: 86 HILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTD 145
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEV-TATACGADFTVWLSSVEGAS 183
G A+G+N GQ+GSGS N +P+P R CL + V + CG T L+ V+
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTAN--QPTPRRVSSCLQNRVAVSIVCGQ--TSSLAVVDNGE 201
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G GQLG G + Q P + AL G + +V G H++A
Sbjct: 202 VYGWGYNGNGQLGLGNNGN--------------QLTPCRLVALQGLCVQQVVSGYAHSLA 247
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
+ +G +Y WG YG+LG + ++ P ++ + E ++ + +S+ T+
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQI-------MTEKERIVEIAACHSTHTSAA 300
Query: 304 ----GQLYMWGKLK 313
GQ+YMWG+ +
Sbjct: 301 KTQSGQVYMWGQCR 314
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 38/305 (12%)
Query: 106 ELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
ELS I+KA G + + +T D AFG N LG+G + I P V L
Sbjct: 17 ELST--IRKAYVFGTSANEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGR 74
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V + + G+ + L++ +G + G Y QLG+GT N+ P
Sbjct: 75 KVVSLSYGSGPHILLATEDG-ELFAWGHNGYSQLGNGTTNQ--------------GVAPV 119
Query: 222 AIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
++A L + +VACG++H++A+ G VY WG+ G++G ++ PRRV +
Sbjct: 120 LVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQ 179
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNL 333
N V I G +S G++Y WG L NNG+ + P L+ L G +
Sbjct: 180 NRV---AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLVALQGLCV 235
Query: 334 RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-AC 391
+ + SG H D + +WG YG+LG G KS+ + + E ++ + AC
Sbjct: 236 QQVVSGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMTEKERIVEIAAC 292
Query: 392 GYGHS 396
H+
Sbjct: 293 HSTHT 297
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
LVS T L + C S H +A+ G Y WG N GQ+G G + P
Sbjct: 120 LVSATLLNR------KVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRR 173
Query: 104 VSELSKYKIK-KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--- 159
VS + ++ G++ ++ V ++G +G+N +GQLG G+ N++ P + L
Sbjct: 174 VSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGL 233
Query: 160 -VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
V +V + + L+ + + G YGQLG G N+ N + S V++ E
Sbjct: 234 CVQQVV-----SGYAHSLALTDEGLLYAWGANTYGQLGTG--NKSN-QLSPVQIMTEK-- 283
Query: 219 RPRAIAALAGETIVKV-ACGTNHTVAVDSK-GYVYTWG 254
E IV++ AC + HT A ++ G VY WG
Sbjct: 284 ----------ERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P RL L G+ ++ V +G H +A+ EG Y WG N GQLG G+K +
Sbjct: 218 NGNQLTPCRLVALQGLCVQQVVSG--YAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PVQIMTEKERIVEIAACHSTHT 297
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 16/177 (9%)
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
N + + S VY +G LG + + VP++VD+ V+ +S GS
Sbjct: 32 NEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVS----LSYGSGPHI 87
Query: 299 CTAG-GGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS- 349
A G+L+ WG +L N + L+ + N + + G+ H DS
Sbjct: 88 LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSG 147
Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
+WG+ G++G G + + P++V L+ +S+ CG SL +VD V
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEV 202
>gi|18416604|ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|16604485|gb|AAL24248.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|332004314|gb|AED91697.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 553
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 164/381 (43%), Gaps = 74/381 (19%)
Query: 46 SPTRLRPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
SPT L + D+ + ++ H +A+ +G Y+WGR G+LG G + P +
Sbjct: 5 SPTLL---ISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVL 61
Query: 104 V-----SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
V +E + +I AG H++ V++DG+ +G+N +GQLG N + P ++
Sbjct: 62 VEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDG-ENSLAPCLIKN 120
Query: 159 LVSEVTATA--------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
L T+++ G+D V +V+ S+++ + G L + +
Sbjct: 121 LFERETSSSSLNDSGREVGSDLKV--CTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDP 178
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG-----------YVYTWGFGGYG 259
+L++ + P P I G T++KVACG H VA+ G +Y+WG +G
Sbjct: 179 RLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHG 238
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
+LG + + P+ V+ F + + L + +C A L + K G
Sbjct: 239 QLGLGDGESRARPQTVETFNQKSGLTVYDI--------ACGAHHTALLTYRKETPKG--- 287
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV- 378
S C ++G + G+LG+ KSS++P+ V
Sbjct: 288 ----------------------------PSICWTFGFGENGQLGH--RSNKSSSLPEPVS 317
Query: 379 DILEGMHVISVACGYGHSLVI 399
D+ E +++SV CG H+ V+
Sbjct: 318 DLPEHAYLVSVDCGLFHTSVV 338
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK---YKIKKAGAGRSHTVVVT-----EDGNS 131
Y+WG N GQLG GD R RP V ++ + G HT ++T G S
Sbjct: 230 YSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPS 289
Query: 132 L--AFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNA 187
+ FG+ ++GQLG S ++ P PV L + + CG T +SS EG + +
Sbjct: 290 ICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSS-EGY-VWSW 347
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G+ + LG D + + V+ ++ PR + + V+V+CG HTV V
Sbjct: 348 GMER--GLGLCPDVNF----TEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDG 401
Query: 248 GY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
GY +++WG G G LG D +VP VF N + P
Sbjct: 402 GYKLWSWGRGRNGVLGTGNVSDCYVPTL--VFWPNELKP 438
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 118/293 (40%), Gaps = 49/293 (16%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK----IQRDRPTIVSELSK 109
VG D++ S +A+D G + WG N Q D P + +
Sbjct: 138 VGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHG 196
Query: 110 YKIKKAGAGRSHTVVVTEDGN---------SLAFGW--NKHGQLGSGSIRNEIEPSPVRC 158
+ K G H V + G+ S+ + W N HGQLG G + P V
Sbjct: 197 RTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVET 256
Query: 159 LVSE----VTATACGADFTVWLS----SVEGASIL-NAGLPQYGQLGHGTDNEYNTKDSS 209
+ V ACGA T L+ + +G SI G + GQLGH ++ K SS
Sbjct: 257 FNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSN-----KSSS 311
Query: 210 VKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFG-GYG-----RLG 262
+ P ++ L +V V CG HT V S+GYV++WG G G
Sbjct: 312 L---------PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFT 362
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG-QLYMWGKLKN 314
E D+ VPR++ P + +S G+ ++ GG +L+ WG+ +N
Sbjct: 363 EVEAGDDSVPRKISGGSSRFRDPVQ--VSCGAAHTVLVVDGGYKLWSWGRGRN 413
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 112/298 (37%), Gaps = 67/298 (22%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
IR V + H +AV +G + WG N GQLG D P ++ L + + +
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERETSSSSL 131
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-------------EIEPSPVRCLVS--- 161
S E G+ L K G + S +I N + EP P S
Sbjct: 132 NDSG----REVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPI 187
Query: 162 ----------EVTATACGADFTVWL---------SSVEGASILNAGLPQYGQLGHGTDNE 202
V ACG + V L +S + + + + G +GQLG G
Sbjct: 188 PFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDG-- 245
Query: 203 YNTKDSSVKLAYEAQPRPRAIAAL---AGETIVKVACGTNHTVAVDSK-------GYVYT 252
E++ RP+ + +G T+ +ACG +HT + + +T
Sbjct: 246 ------------ESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWT 293
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+GFG G+LGHR K +P V + L + G ++S + G ++ WG
Sbjct: 294 FGFGENGQLGHRSNKSSSLPEPVSDLPEHAYL---VSVDCGLFHTSVVSSEGYVWSWG 348
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 41/210 (19%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPP--- 286
IV VA G H++AV G V+ WG+ YG+LG + ++ P + ++F+R
Sbjct: 75 IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERETSSSSLND 133
Query: 287 ----------EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD---------WMYPKPLMD 327
+ AGS+ S G L+MWG + + P P++D
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 328 LSG---WNLRCMDS--------GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMP 375
G + C D G++H D S + SWG+ +G+LG G +S A P
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLG--DGESRARP 251
Query: 376 KKVDIL---EGMHVISVACGYGHSLVIVDR 402
+ V+ G+ V +ACG H+ ++ R
Sbjct: 252 QTVETFNQKSGLTVYDIACGAHHTALLTYR 281
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 147/338 (43%), Gaps = 32/338 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V + +G YT G N GQLGH DK P +V L KI GR H+
Sbjct: 38 VGCGGQHSVFLMHDGSVYTCGSNSCGQLGH-DK-AGISPEVVGALDTQKITMVSCGRGHS 95
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVE 180
+ V E G A+G GQLG G+ + P V+ L ++ CG V LS
Sbjct: 96 MAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALS--R 153
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ G GQLG G K KL P + +LAG + ++ G +H
Sbjct: 154 DGQLFTWGQNTSGQLGLG-------KGEPSKLF------PHPLKSLAGIPLAQITAGGDH 200
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ A+ G V+ WG G+LG +++D VP + + V+ IS G +++
Sbjct: 201 SFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVV----YISCGDEHTAAL 256
Query: 301 AGGGQLYM-----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G L+ WG+L + + + + P+ +++L G + + G H FV +
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVY 316
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDIL-EGMHVISV 389
++G +G+LG G G S P K + E VI++
Sbjct: 317 AFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINI 354
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 148/334 (44%), Gaps = 33/334 (9%)
Query: 82 WGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG + GQLG G +K P S +K+ G G H+V + DG+ G N G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
QLG + I P V L ++T +CG ++ ++ E + G GQLG G
Sbjct: 64 QLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAVN--EQGQLFAWGAGDGGQLGLG- 118
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
T +++V++ PR + L I +V CG H VA+ G ++TWG G
Sbjct: 119 -----TTETTVRI-------PRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSG 166
Query: 260 RLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
+LG + + + P + ++ P A I+AG +S + G ++ WGK +
Sbjct: 167 QLGLGKGEPSKLFPHPL----KSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLG 222
Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKS 371
N+ D P + L + + G+ H + D ++G +G+LG+G S
Sbjct: 223 LNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHG--STNS 280
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+P++V L G V +ACG H+L V + V
Sbjct: 281 ELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGV 314
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P L+ L G+ + + AG H A+ + G + WG+N GQLG DK R P +
Sbjct: 178 LFPHPLKSLAGIPLAQITAG--GDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHI 235
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L K+ G HT +T+DG FG GQLG GS +E+ P V L+ +EV
Sbjct: 236 KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEV 295
Query: 164 TATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGT 199
+ ACG T L+ V + ++ A G +GQLG G
Sbjct: 296 SQIACGRHHT--LAFVPSSGVVYAFGCNSHGQLGTGI 330
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLSLSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +++ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4280 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTI 103
T LRP + ++ R V HC+++ + Y WG N GQ G G+ +P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 104 VSELSKYKIKKAGAGRSHTVVVT 126
VS L I++ AG SH++ T
Sbjct: 712 VSGLDGIAIQQISAGTSHSLAWT 734
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4052 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4108
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4109 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4168
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4227
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4228 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4274 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4329
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4330 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4363
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 4004 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4060
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4119
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4120 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4165
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4191
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4192 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4235
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4236 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4263
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLSLSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +++ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4291 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4349 LQGKNIRQISAGRCHSAAWT 4368
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 48 TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTI 103
T LRP + ++ R V HC+++ + Y WG N GQ G G+ +P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 104 VSELSKYKIKKAGAGRSHTVVVT 126
VS L I++ AG SH++ T
Sbjct: 712 VSGLDGIAIQQISAGTSHSLAWT 734
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 165/386 (42%), Gaps = 55/386 (14%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
+ ++++P L V +D++ +A G H V +G +TWG G+LGHG
Sbjct: 112 VKNDVLTPKPLETNVVLDVQQIACGVR--HIALVTRQGEVFTWGEECGGRLGHGIDRDFS 169
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGS-IRNEIEPSP 155
RP +V L+ + G HT +T + +G +N G LG G+ I + I P
Sbjct: 170 RPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWI---P 225
Query: 156 VRCLVS----EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSS 209
R + S +V + ACG W S++ ++ + G YG LGHG D E
Sbjct: 226 KRVVGSLEGLQVLSVACGT----WHSALATSNGKLYTFGDGTYGVLGHG-DRE------- 273
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
+ Y PR + L+G +KVACG HT A+ S ++TWG G
Sbjct: 274 -SVVY-----PREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKY 327
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNN 315
RLGH ++ +P V N + ++ + T G M +G+L N
Sbjct: 328 RLGHGNKETYLLPTCVSSLIDYNF---HQLACGHNMTVALTTSGHVFTMGGTAYGQLGNP 384
Query: 316 GDDWMYPKPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSA 373
D + P + D L G + + G H V + + SWG G LG+G + +
Sbjct: 385 SSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKA- 443
Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
P ++ L+ HV S++CG + I
Sbjct: 444 -PTLIEALKDRHVKSISCGSNFTASI 468
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 142/342 (41%), Gaps = 40/342 (11%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
+++ G H +VT G +G G+LG G R+ P V L VS V ACG
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGE 189
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
T ++S G+ G LGHGTD + P+ R + +L G
Sbjct: 190 YHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWI------------PK-RVVGSLEGLQ 236
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-------RNNV 283
++ VACGT H+ S G +YT+G G YG LGH +++ PR V + V
Sbjct: 237 VLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGV 296
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMD 337
A++ S S +L+ WG +L + N + ++ P + L +N +
Sbjct: 297 WHTAAIVEVMSQTGS-NMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLA 355
Query: 338 SG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
G NM + + G YG+LG P +P V D L G V ++CG H
Sbjct: 356 CGHNMTVALTTSGHVFTMGGTAYGQLG-NP--SSDGVIPCLVQDRLVGEFVEEISCGAYH 412
Query: 396 SLVIVDRTNVGE-------RLDQLDVYDGKASSQDNEEIDRN 430
++V+ R V RL DV D KA + DR+
Sbjct: 413 TVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRH 454
>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
Length = 387
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 47/342 (13%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTE-DGNSL 132
E + ++WG GQLG G P ++ LS I G +H + + DG L
Sbjct: 19 EQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGGAHVIALNSGDGKVL 78
Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQ 191
+G GQLG G++ + + P PV L S V T + G + ++S + + G
Sbjct: 79 TWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVS--DKGCVFTCGDGS 136
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLGHG +N + T P ++ A + ++ACG H++ + VY
Sbjct: 137 FGQLGHGDNNSHAT--------------PVQVSYFANRHVHQIACGMRHSLVLLKGNQVY 182
Query: 252 TWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+G G G+LG + K + + P F+ + ++I+ G +S+ + G LY W
Sbjct: 183 GFGSGKRGQLGISKDKIKSISLPLVTCGFEDIKI---NSIITNGD-HSAALSVDGHLYTW 238
Query: 310 GKLKNNGDDWMYPKPLMD-------LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL 362
G+ D P+ L+ GWN +GN F S C+
Sbjct: 239 GRGFPGTSDVFTPRHLVSSLQFIKVALGWNHALALTGNFFFFCVWMSVCV---------- 288
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
Y + A+ +V IL+GM V+ +A G HS ++ + +
Sbjct: 289 ----YCDPTHAIFDRVSILDGMKVVDIAAGSEHSALLTGKMD 326
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G G+LG + +DE +P+ + F +V P ++ G+ + +G G++ W
Sbjct: 22 VWSWGAGTDGQLGTGKLEDEHLPQLLQ-FPSLSVRPISSLACGGAHVIALNSGDGKVLTW 80
Query: 310 GKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G+ + N ++P+P+ L + + + +G H +D C+ + G +G+L
Sbjct: 81 GRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVSDKGCVFTCGDGSFGQL 140
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+G S A P +V HV +ACG HSLV++ V
Sbjct: 141 GHGD--NNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQV 181
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 48/275 (17%)
Query: 42 GNLVSPTRLRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN++S +P+ +D I ++AG H V +G +T G GQLGHGD
Sbjct: 91 GNMLSSVHPQPVTFLDSFVITHISAGW--SHSGFVSDKGCVFTCGDGSFGQLGHGDNNSH 148
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVR 157
P VS + + + G H++V+ + FG K GQLG S I V
Sbjct: 149 ATPVQVSYFANRHVHQIACGMRHSLVLLKGNQVYGFGSGKRGQLGISKDKIKSISLPLVT 208
Query: 158 CLVSEV--TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLA 213
C ++ + D + LS ++ L +G+ GT + + + SS++
Sbjct: 209 CGFEDIKINSIITNGDHSAALS-------VDGHLYTWGRGFPGTSDVFTPRHLVSSLQFI 261
Query: 214 YEAQPRPRAIA-----------------------------ALAGETIVKVACGTNHTVAV 244
A A+A L G +V +A G+ H+ +
Sbjct: 262 KVALGWNHALALTGNFFFFCVWMSVCVYCDPTHAIFDRVSILDGMKVVDIAAGSEHSALL 321
Query: 245 DSK--GYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
K G + TWG+G +G+LG KD+ P+ V +
Sbjct: 322 TGKMDGTIKTWGWGEHGQLGLGSTKDQTNPQSVSL 356
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ + AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ V + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P V L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK V+ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y+WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RYVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P + K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V VACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G ++G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG G D + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD 51
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 467 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 526
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586
Query: 155 PVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 638
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 639 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 692
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 693 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 725
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 516 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 561
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 562 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 619
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 677
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 678 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 492
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 553 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 609
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 663
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 692
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 693 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 745
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 746 LPGLDTKHIVGIACGPAQSFA 766
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 167/355 (47%), Gaps = 38/355 (10%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
+ L G + + +++G S H +A+ +G + WG N GQLG+G P V L
Sbjct: 35 KELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLK-- 92
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
+ AG H++ + +DG+ +G +GQ S R+ P V+ L + A A G
Sbjct: 93 DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKEL-KNIVAIAAGW 151
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DF+ L+ S+ G+ +G+LG G+ K S+V P + L +
Sbjct: 152 DFS--LAVGSDGSVWAWGINNHGELGIGS-----LKPSAV---------PVKVKGL--KD 193
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+V V+ G H++A+ G V++WG+ G LG+R +D V V V ++V+ I
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIA----I 249
Query: 291 SAGSVNSSCTAGGGQLYMW--GKLKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
SAG +S G +++W G ++ NG D+ P + L+ + + +G H
Sbjct: 250 SAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGYRHSIAL 307
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVI 399
D + WGH YG LG G+ S + + ++G+ +V++VA G HS+ +
Sbjct: 308 KDDGTVWVWGHNSYGVLG-SNVGEHSFLLVQ----VKGLKNVVAVAAGRLHSVAL 357
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 56/330 (16%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
K G + G+ + +GR + NL P +++ L V VA H +A+ +G
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNL--PYKVKWLDNV----VAIATGGSHTLAIKRDG 412
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
++WG N +GQLG+G PT V L+ + +AG+ H++ V +DG +G+
Sbjct: 413 TVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEAGS--QHSLAVDKDGTVWVWGF- 469
Query: 138 KHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFT--------VW------------- 175
+ ++ + P P++ ++++T A G D+ +W
Sbjct: 470 IESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTD 529
Query: 176 -----------LSSVEGASILNAGLPQYGQLGHGTDNEY----NTKDSSVKLAYEAQPRP 220
L +++ + AG + L TD +T + K +P
Sbjct: 530 SSVSSVTKLIRLDNIKNVRSIAAG--YFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEKP 587
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
I L+G +VKVA G H++A+ G V++WG+ YG+LG+ ++ +VP RV
Sbjct: 588 VKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVK--GL 643
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
NNV+ I+AG +S G +++WG
Sbjct: 644 NNVVA----IAAGDYHSMALKKDGTVWVWG 669
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 162/400 (40%), Gaps = 73/400 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L D+ V+AG + H +A+ +G + WG GQ + RD T V
Sbjct: 85 PVRVKGLK--DVVAVSAG--TFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKV 138
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
I AG ++ V DG+ A+G N HG+LG GS++ P V+ L +V A
Sbjct: 139 KELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL-KDVVAV 197
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+ G + L+ ++ + G + G+LG+ T+D +V + + IA
Sbjct: 198 SAGLYHS--LALKRDGTVWSWGYNEDGELGNRP-----TEDYTVSVPVRVKGLSDVIAIS 250
Query: 227 AG---------------------------------------ETIVKVACGTNHTVAVDSK 247
AG +V +A G H++A+
Sbjct: 251 AGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDD 310
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G V+ WG YG LG + ++ +V + NV+ ++AG ++S G ++
Sbjct: 311 GTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVA----VAAGRLHSVALTKNGTIW 364
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
WG +NN P + L N+ + +G H + D + SWG
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIATGGSHTLAIKRDGTVWSWGANNK 422
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G Y KSS +P V L + + V G HSL +
Sbjct: 423 GQLGNGTY--KSSYIPTCVKGLN--NAVLVEAGSQHSLAV 458
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 165/394 (41%), Gaps = 59/394 (14%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G + G + +G G LV L+ +V V AAG H VA+ G
Sbjct: 311 GTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKNVVAV-----AAG--RLHSVALTKNGTI 363
Query: 80 YTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG + + P V L + G SHT+ + DG ++G N
Sbjct: 364 WAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGTVWSWGANN 421
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEGASILNAGLPQ 191
GQLG+G+ ++ P+ V+ L + V + A D TVW+
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGLNNAVLVEAGSQHSLAVDKDGTVWV--------------- 466
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+G + +E NTKD P P I L I ++A G ++ + + G +
Sbjct: 467 WGFI-ESVWSEKNTKDI-------LSPLPIKIGKL--NDITEIAGGLDYILVLRKDGNI- 515
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
WG G R+ D V + + +N+ + I+AG +S G ++ WG
Sbjct: 516 -WGCGN--DFYFRKFTDSSVSSVTKLIRLDNIKNVRS-IAAGYFHSLAVRTDGTVWSWGD 571
Query: 311 -KLKNNGDDWMY---PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
L N + P + LSG + + +G H + D + SWG+ YG+LG G
Sbjct: 572 TNLDNKKKYLNFSEKPVKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNG 629
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+++S +P +V L +V+++A G HS+ +
Sbjct: 630 T--RETSFVPVRVKGLN--NVVAIAAGDYHSMAL 659
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 89/275 (32%)
Query: 41 DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGR----NERGQLGHGDK 95
D ++ S T+L L + ++R +AAG H +AV +G ++WG N++ L +K
Sbjct: 529 DSSVSSVTKLIRLDNIKNVRSIAAGY--FHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEK 586
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
P + LS + K AG+ H++ + +DG
Sbjct: 587 -----PVKIKGLSG--VVKVAAGKYHSLALKKDG-------------------------- 613
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
TVW + G YGQLG+GT E
Sbjct: 614 -----------------TVW----------SWGYNAYGQLGNGTR--------------E 632
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + L +V +A G H++A+ G V+ WG G+LG R + VP +V
Sbjct: 633 TSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKV 690
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ + +NV+ I+AG +S G +++WG
Sbjct: 691 E--KLDNVVA----IAAGDTHSVALKKDGTVWVWG 719
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4038 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4094
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4095 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4154
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4213
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4214 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4259
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4260 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4315
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4316 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3990 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4046
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4105
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4106 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4151
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4177
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4178 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4221
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4222 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +V+E +G N QL G+ ++P T A + ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ G YG+LG G N +T KL +E + +++ G HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A ++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527
Query: 302 GGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-S 353
G+LY WG +L + + + P + D+S N+ + G+ H + D + S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 586 FGGGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4277 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4335 LQGKNVRQISAGRCHSAAWT 4354
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 131/278 (47%), Gaps = 44/278 (15%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
P++++ L + + V A HC+AVD +GR Y WG NE GQ G G ++R
Sbjct: 83 PSQVKALA--NAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRR 140
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSPV 156
D SK +++ AG +H+VV+T +G+ +G W G I+ P V
Sbjct: 141 DITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPP------GDIKQISTPVRV 194
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ L +V A GA L+ +E + G +YGQLG G +
Sbjct: 195 QGL-EKVRLIAVGAFHN--LALLEDGILWAWGNNEYGQLGTG----------------DT 235
Query: 217 QPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVPR 273
QPR P A+ L+ T+V +A G H+ A+ G VY WG G +GRLG + K + VP+
Sbjct: 236 QPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQ 295
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+V + N++ IS G +S G+++ +G+
Sbjct: 296 KVQLLVEENIVQ----ISCGGTHSVALTRDGRMFSFGR 329
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 144/331 (43%), Gaps = 34/331 (10%)
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG E GQLG G+ +++ V L+ + AG +++ + EDG +GWN+ G
Sbjct: 10 SWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRG 69
Query: 141 QLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E PS V+ L + A + +G + G +YGQ G
Sbjct: 70 TLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCG--- 125
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E KD + + P+ A+ ++ +VA G H+V + +G+V+TWG
Sbjct: 126 -EEPERKDDTGRPLRRDITIPQRCASKL--SVRQVAAGGTHSVVLTREGHVWTWG----- 177
Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
W P +++ R L +I+ G+ ++ G L+ WG +
Sbjct: 178 --------QPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQ 229
Query: 314 -NNGDDWMYPKPL--MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
GD +P+ LS L + +G H D + WG ++G LG+G
Sbjct: 230 LGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGD--D 287
Query: 370 KSSAM-PKKVDILEGMHVISVACGYGHSLVI 399
KSS M P+KV +L +++ ++CG HS+ +
Sbjct: 288 KSSKMVPQKVQLLVEENIVQISCGGTHSVAL 318
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 162/380 (42%), Gaps = 55/380 (14%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELS 108
++ L ++ V AG S + +A+ +G+ +TWG N+RG LGH + + + P+ V L+
Sbjct: 33 VKALAAQNVCSVVAG--SRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALA 90
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
KI +A G H + V + G + A+G N++GQ G R + P+R ++ C
Sbjct: 91 NAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIT--IPQRC 148
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--------RP 220
+ +V + AG GT + T++ V + P P
Sbjct: 149 ASKLSV--------RQVAAG---------GTHSVVLTREGHVWTWGQPWPPGDIKQISTP 191
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
+ L E + +A G H +A+ G ++ WG YG+LG + + P V
Sbjct: 192 VRVQGL--EKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD 249
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDW---MYPKPLMDLSGWNL 333
++ I+AG +S+ G +Y WG+ ++ GDD M P+ + L N+
Sbjct: 250 LTLVD----IAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENI 305
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE---------G 383
+ G H + D S+G +G LGYG M +++ G
Sbjct: 306 VQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLSGSGAG 365
Query: 384 MHVIS--VACGYGHSLVIVD 401
H S VACG H+L IV+
Sbjct: 366 GHWCSKLVACGGRHTLAIVE 385
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+ +P R++ L +R +A G + H +A+ +G + WG NE GQLG GD R +P
Sbjct: 187 QISTPVRVQGLE--KVRLIAVG--AFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPI 242
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
V LS + AG H+ +T+DG +G +HG+LG G + +++ P V+ LV
Sbjct: 243 AVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVE 302
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
E + +CG +V L+ + + G +G+LG+G T +++ P
Sbjct: 303 ENIVQISCGGTHSVALT--RDGRMFSFGRGDHGRLGYG---RKVTTGHPMEVPINLPPAT 357
Query: 221 RAIAALAGETIVK--VACGTNHTVAV 244
+ AG VACG HT+A+
Sbjct: 358 NLSGSGAGGHWCSKLVACGGRHTLAI 383
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 25/262 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 197
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG G ++ PS + L ++ V ACG + L
Sbjct: 198 GEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257
Query: 177 SSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A L G + ++A
Sbjct: 258 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 300
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CG HT+A V G V+++G G G+LG+ D+ +P V V + L E+ S
Sbjct: 301 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV-SSSEELKLESHTSEKE 359
Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
+ AGG Q + +W K +N+
Sbjct: 360 L--IMIAGGNQSILLWIKKENS 379
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L GV + ++AG H +A+ + G
Sbjct: 154 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 209
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG G +D P+++ L K++ G SH+ ++T+DG FG
Sbjct: 210 NVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAG 269
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 270 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 324
Query: 193 GQLGHG 198
GQLG+G
Sbjct: 325 GQLGNG 330
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 191
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G ++ + G ++GQLG G +KDS P I
Sbjct: 192 LAQISAGEAHSMALSMSG-NVYSWGKNEFGQLGLG---HTESKDS-----------PSLI 236
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
AL + + +ACG +H+ + G ++T+G G +G+LGH ++E P
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 285
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R+ + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 129 RSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 188
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNL 333
P A ISAG +S + G +Y WGK + + + P + L +
Sbjct: 189 G----VPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + D ++G ++G+LG+ ++ P V L G V +ACG
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGNRVTQIACG 302
Query: 393 YGHSLVIV 400
H+L V
Sbjct: 303 RWHTLAYV 310
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4352
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4280 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4338 LQGKNVRQISAGRCHSAAWT 4357
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 157/374 (41%), Gaps = 51/374 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ ++ G H V +G +TWG G+LGHG + P
Sbjct: 252 DVLTPKPLESNVVLDVHQISCGVR--HVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPK 309
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPS----PV 156
+V L+ I G HT ++ G+ + G N G LG G+ + P P+
Sbjct: 310 LVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPL 369
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ ++ + G +G LGHG ++
Sbjct: 370 EGL--QVLSIACGT----WHSALATSNGKLFTFGDGTFGALGHGDRKSVSS--------- 414
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
P+ + +L G +KVACG HT A+ S ++TWG G RLGH
Sbjct: 415 -----PKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHG 469
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
+ +P V N + + ++ + T G M +G+L N +
Sbjct: 470 NKDAYLLPTCVSSLIDYNF---QQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGK 526
Query: 321 YPKPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D L G + + G H V + S +WG G+LG+G + +P V
Sbjct: 527 IPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHG--DTEDRKLPTLV 584
Query: 379 DILEGMHVISVACG 392
+ L+ HV +++CG
Sbjct: 585 EALKERHVKNLSCG 598
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + +++CG H V +G V+TWG GRLGH + P+ V+
Sbjct: 256 PKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLA 315
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDD---WMYPKPLMDLSG 330
N+ ++ G ++ + G L+ WG NN G D W+ + L G
Sbjct: 316 VTNI----DYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEG 371
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H ++ ++G +G LG+G +KS + PK++ L G+ I V
Sbjct: 372 LQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHG--DRKSVSSPKELQSLNGLKTIKV 429
Query: 390 ACGYGHSLVIVD 401
ACG H+ IV+
Sbjct: 430 ACGVWHTAAIVE 441
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 46/243 (18%)
Query: 20 GELLFCGSTCWDAVGR--RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV---- 73
G+L G + A+G RK ++ SP L+ L G ++ + C H A+
Sbjct: 391 GKLFTFGDGTFGALGHGDRK-----SVSSPKELQSLNG--LKTIKVACGVWHTAAIVEVM 443
Query: 74 -----DVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
++ R +TWG ++ +LGHG+K PT VS L Y ++ G + TV +T
Sbjct: 444 SQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTT 503
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEG 181
G+ G + +GQLG+ S +I CLV + V +CGA T L+S
Sbjct: 504 SGHVFTMGGSAYGQLGNPSSNGKIP-----CLVQDRLVGEFVEEISCGAYHTAVLTS--R 556
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ + G GQLGHG +T+D + P + AL + ++CG N T
Sbjct: 557 SEVFTWGRGANGQLGHG-----DTEDRKL---------PTLVEALKERHVKNLSCGANFT 602
Query: 242 VAV 244
++
Sbjct: 603 SSI 605
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y+WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RYVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P + K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V VACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G ++G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG G D + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD 51
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C H +AV +GR Y+WG GQLG G+ R P ++ LSKYK+ + G
Sbjct: 94 KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACG 153
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGA-DFTV 174
H++ +T DG ++G N HGQLG G I ++ P V L + A GA F +
Sbjct: 154 HDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFAL 213
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
LS V G G +N + S K E +P +IAAL + V
Sbjct: 214 SLSGV--------------VYGWGRNNAHQLGLSQAK-PKEQIFKPYSIAALRSLDVAFV 258
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--------QKDEWV 271
+CG HT + G VYT+G G+LG QK EW+
Sbjct: 259 SCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGPQKVEWI 303
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 27/272 (9%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH----GDKIQRDRPT 102
P R P D V C H + + +G + G N RGQLG G + + P
Sbjct: 26 PFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPE 85
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
++ L K+ G+ H++ V G ++G GQLG+G + + + P + L
Sbjct: 86 LIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY 145
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+V ACG D ++ L++ I + G +GQLG G D +Q P+
Sbjct: 146 KVIQVACGHDHSIALTN--DGRIFSWGQNIHGQLGLGKD-------------ISSQASPQ 190
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE---WVPRRVDVF 278
++AL G + +VA G H+ A+ G VY WG +LG + K + + P +
Sbjct: 191 QVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAAL 250
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ +V A +S G+ +++ G +Y +G
Sbjct: 251 RSLDV----AFVSCGAEHTAVLTQNGSVYTFG 278
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 52/344 (15%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA----GAGRSHTVVVTEDGNSLAFG 135
Y WG GQLG G P + +A G HT+++ +DG + G
Sbjct: 3 YCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCG 62
Query: 136 WNKHGQLG----SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLP 190
N GQLG SG + P ++ L ++ V +CG + + L+ + + G
Sbjct: 63 DNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHS--LAVCNKGRVYSWGAG 120
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG G D + P+ I AL+ +++VACG +H++A+ + G +
Sbjct: 121 TFGQLGTG-----ELGDRLI---------PKTINALSKYKVIQVACGHDHSIALTNDGRI 166
Query: 251 YTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG +G+LG ++ + P++V P A ++AG +S + G +Y W
Sbjct: 167 FSWGQNIHGQLGLGKDISSQASPQQVSALDGI----PLAQVAAGGAHSFALSLSGVVYGW 222
Query: 310 GKLKNNG-----------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQ 358
G +NN + P + L ++ + G H V + +
Sbjct: 223 G--RNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVY----T 276
Query: 359 YGELGYGPYGQKSSAMPK----KVDILEGMHVISVACGYGHSLV 398
+G+ G G+ SS+ PK KV+ ++G V +ACG H+LV
Sbjct: 277 FGDDSAGQLGRNSSSSPKFGPQKVEWIDG-PVSLLACGSYHTLV 319
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G K V +P PRA A + +V VACG HT+ + G V +
Sbjct: 11 GQLGLG-------KGEGVSGPVPFRPGPRAPA---DQAVVLVACGERHTLLLRDDGGVAS 60
Query: 253 WGFGGYGRLGHR----EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG R ++K + P + + V+ +S G +S G++Y
Sbjct: 61 CGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVH----VSCGKEHSLAVCNKGRVYS 116
Query: 309 WGK----LKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
WG G+ D + PK + LS + + + G+ H + D SWG +G+
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G S A P++V L+G+ + VA G HS +
Sbjct: 177 LGLGK-DISSQASPQQVSALDGIPLAQVAAGGAHSFAL 213
>gi|224123724|ref|XP_002319149.1| predicted protein [Populus trichocarpa]
gi|222857525|gb|EEE95072.1| predicted protein [Populus trichocarpa]
Length = 1075
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 151/378 (39%), Gaps = 74/378 (19%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P ++ L G ++ V+A H AV G YTWG G+LGH + I + +++
Sbjct: 178 PCKVDALHGSFVKLVSAA--KFHSAAVSASGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235
Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
L ++K A + HTV+ TE G +G N+ GQLG ++ + P V L
Sbjct: 236 PRQVTSGLGSRRVKAIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TVDTQPTPRRVSSL 294
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
S + A A T +S + + G + GQLG+GT N +
Sbjct: 295 RSRIVAVAAANKHTAVVS--DSGEVFTWGCNREGQLGYGTSNSASNYT------------ 340
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
PRA+ L G+ + V+ HT+ + + G VYTW GHR PRRV +
Sbjct: 341 PRAVEYLKGKVLTGVSVAKYHTIVLGAGGEVYTW--------GHRLV----TPRRVVIAR 388
Query: 278 --------------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
+R +V A I+AG V+S G L+ W + D + +
Sbjct: 389 NLKKSGNTPWKSHRLERLHV----AAIAAGMVHSLALTDDGTLFYWA----SADPDLRCQ 440
Query: 324 PLMDLSGWNLRCMDSGNM-HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
L L G N+ + +G V A W G+K P V L
Sbjct: 441 QLYSLCGNNIVSISTGKYWAAVVTATGDVYMWD------------GKKGKDEPPAVTRLH 488
Query: 383 GM-HVISVACGYGHSLVI 399
G+ SV+ G H L++
Sbjct: 489 GVKKATSVSVGETHLLIV 506
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 125/337 (37%), Gaps = 75/337 (22%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
V ++WG QLG G+ + P V L +K A + H+ V+ G +
Sbjct: 152 VATEVFSWGSGANYQLGTGNTHIQKLPCKVDALHGSFVKLVSAAKFHSAAVSASGEVYTW 211
Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
G+ + G+LG I P V + V A A TV + EG +
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTSGLGSRRVKAIAAAKHHTVL--ATEGGEVFT 269
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G + GQLG+ D QP PR +++L IV VA HT V
Sbjct: 270 WGSNREGQLGYTVDT---------------QPTPRRVSSLRSR-IVAVAAANKHTAVVSD 313
Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G V+TWG G+LG+ + PR V+ + + VL +S ++ GG
Sbjct: 314 SGEVFTWGCNREGQLGYGTSNSASNYTPRAVE-YLKGKVL---TGVSVAKYHTIVLGAGG 369
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
++Y WG + P+ R + + N+
Sbjct: 370 EVYTWGH------RLVTPR----------RVVIARNL----------------------- 390
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+KS P K LE +HV ++A G HSL + D
Sbjct: 391 ----KKSGNTPWKSHRLERLHVAAIAAGMVHSLALTD 423
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+GGE+ GS R+G L + + R + + R VA + H V G
Sbjct: 263 EGGEVFTWGSN-------REGQLGYTVDTQPTPRRVSSLRSRIVAVAAANKHTAVVSDSG 315
Query: 78 RCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
+TWG N GQLG+G + P V L + + HT+V+ G +G
Sbjct: 316 EVFTWGCNREGQLGYGTSNSASNYTPRAVEYLKGKVLTGVSVAKYHTIVLGAGGEVYTWG 375
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ + AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ V + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P V L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +V+E +G N QL G+ ++P T A + ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ G YG+LG G N +T KL +E + +++ G HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A ++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527
Query: 302 GGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-S 353
G+LY WG +L + + + P + D+S N+ + G+ H + D + S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G G+LG+G + PK V+ L+GM + V G SL +
Sbjct: 586 FGGGDNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 68/381 (17%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R +GC+ C+ + ++WG N GQLG G + + +P + ++ KI G
Sbjct: 11 RLCKSGCIVGTCL----QRGMFSWGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGG 66
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRCLVSEVTATACGADFT 173
HT+++T+ G + GWN GQLG G S+ I+ P V CG DF
Sbjct: 67 GGHTLLLTDCGAIYSCGWNSKGQLGLGHTDNLSVFKRIDHLP------PVIKVTCGWDFC 120
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ E + G +GQLG + + + ++ + +
Sbjct: 121 --LAITEVGDLYAWGCNVFGQLGIPEIDSFTAIPTKIQ--------------IFSRNVTS 164
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-----VPRRVDVFQRNNVLPPEA 288
+A G H++AV + G +++WG G+LG+ + K + VP++V + N+ +
Sbjct: 165 IAAGLRHSLAVTNDGKLWSWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLE--NISSVSS 222
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN---------------GDDWMYPKP----LMDLS 329
+ ++C G +Y+WG K+N + + P P L
Sbjct: 223 GSYHSTALTAC----GNMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFG 278
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG----QKSSAMPKKVDILEGM 384
G + + SG H + DS+ WG Y +LG G +K PK++ IL+ +
Sbjct: 279 GRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDI 338
Query: 385 HVISVACGYGHSLVIVDRTNV 405
+ACG H+L + D V
Sbjct: 339 K--QIACGSEHNLALSDDNKV 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-----GD 94
+D PT+++ + ++ +AAG H +AV +G+ ++WG +GQLG+ G
Sbjct: 145 IDSFTAIPTKIQ-IFSRNVTSIAAGLR--HSLAVTNDGKLWSWGSARKGQLGNDQSKTGY 201
Query: 95 KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS---------G 145
++ + P V +L I +G H+ +T GN +G NKH QL + G
Sbjct: 202 QLLQRVPKQVHKLEN--ISSVSSGSYHSTALTACGNMYLWGSNKHNQLTNSVQGVVQSGG 259
Query: 146 SIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
S + +I P P + L A + +T L+ +++ G Y QLG T N
Sbjct: 260 SSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGN 319
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
KD + +P+ + L + I ++ACG+ H +A+ V WG+ +G
Sbjct: 320 NCAKKDVT---------KPKELVIL--KDIKQIACGSEHNLALSDDNKVLAWGWNEHGSC 368
Query: 262 GHREQKDEWVPRRVDVFQRNNV 283
G+ ++++ P+ +D + +
Sbjct: 369 GNGKEENVLTPQVIDDLAKEKI 390
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
IR A G V H VA+ G+ +TWG G LGH + P +V KI+
Sbjct: 141 SIRSTALGGV--HSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIA 198
Query: 117 AGRSHTVVVTEDGNSLAFGWNK-HGQLGSGSIRNEIE------PSPVRCLVSEVTATACG 169
+HT +TE G +G ++ G+LG G E PS V+ L V A +CG
Sbjct: 199 TAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCG 258
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
FT+ L+ Q GQL + G ++ Y ++ QP P +L
Sbjct: 259 GFFTMVLT-------------QEGQLWNWGANSNYELGRGDKVGGWKPQPIP----SLQD 301
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
I+++A G H++A+ G V +WG+G +G+LGH +++ +P ++ +V+
Sbjct: 302 VRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVI---- 357
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN 315
I+ G +S+ G+LYMWG K++
Sbjct: 358 YIACGGSSSAAITDNGKLYMWGNAKDS 384
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
G L P++++ L + A C + + EG+ + WG N +LG GDK+ +P
Sbjct: 237 GGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKP 293
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
+ L +I + +G H++ +T+DG L++G+ +HGQLG SI N+ P+ + L
Sbjct: 294 QPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALAD 353
Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA--YEAQP 218
E V ACG S A N L +G N KDS + + E QP
Sbjct: 354 EHVIYIACGG-------SSSAAITDNGKLYMWG----------NAKDSQLGVPGLPETQP 396
Query: 219 RPRAIAALAGE------TIVKVACGTNHTVAVDSKGYVY 251
P + L + ++ VA G +H + + S ++
Sbjct: 397 LPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLVSSLCLF 435
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 28/260 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRDRPTIVSELSKYK----- 111
IR +A H A+ G YTWGR++ G+LG G + +S SK K
Sbjct: 194 IRHIATA--GTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP 251
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGA 170
+ G T+V+T++G +G N + +LG G +P P+ L + A G
Sbjct: 252 VAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGG 311
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ L+ + +L+ G Q+GQLGH SS+ E Q P I ALA E
Sbjct: 312 YHS--LALTDDGKVLSWGYGQHGQLGH----------SSI----ENQKIPTVIEALADEH 355
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAV 289
++ +ACG + + A+ G +Y WG +LG + + +P V ++ L P V
Sbjct: 356 VIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNV 415
Query: 290 IS--AGSVNSSCTAGGGQLY 307
+S G+ ++ C L+
Sbjct: 416 LSVAVGASHAMCLVSSLCLF 435
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 119/290 (41%), Gaps = 28/290 (9%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL-----N 186
L++G GQLG G + PSPV L + C + L SVE AS L +
Sbjct: 38 LSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGIS 97
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG--ETIVKVACGTNHTVAV 244
GL + G + D +L + Q P + L ++I A G H+VA+
Sbjct: 98 CGLFHSSLVVDGKLWIWGKGDGG-RLGF-GQEYPAFLPTLNPNLDSIRSTALGGVHSVAL 155
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S G V+TWG+GG+G LGH E +PR V+ + + +AG+ ++ T G
Sbjct: 156 SSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKI---RHIATAGTHTAAITE-SG 211
Query: 305 QLYMWGKLK-------------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
+LY WG+ + N G P + L G + +
Sbjct: 212 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 271
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+WG ELG G + P+ + L+ + +I +A G HSL + D
Sbjct: 272 WNWGANSNYELGRG--DKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTD 319
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D+ +A C S H V +G + WG G+LGHG + P +V
Sbjct: 280 PKALQAAVVLDVSSIA--CGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQA 337
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEP----SPVRCLV 160
L+ + G HT VT G +G + G +G + + P SP+ +
Sbjct: 338 LAGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV- 396
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+++ ACGA T +SS + G +G LGHG P
Sbjct: 397 -RISSIACGAWHTALVSS--AGQLFTFGDGTFGVLGHGDKRNLAI--------------P 439
Query: 221 RAIAALAGETIVKVACGTNHTVAVD------------SKGYVYTWGFGGYGRLGHREQKD 268
+ + +L G V+ ACG HT AV S G ++TWG G RLGH +++
Sbjct: 440 KEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQ 499
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKP 324
+ VP V N V S+ + T G M +G+L N D P
Sbjct: 500 KLVPTCVAALVDYNF---RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPG- 555
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
++D + G H V A SS +WG G LG+G +++ P V+ L
Sbjct: 556 MVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTA--PTLVEAL 613
Query: 382 EGMHVISVACGYGHSLVI 399
V +VACG + VI
Sbjct: 614 RDKQVKTVACGSSFTAVI 631
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ A + +ACG+ H V +G V+ WG GRLGH D P+ V
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
N +++ G ++ G+LY WG +G WM + L G
Sbjct: 340 GVNA----ELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEG 395
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H V + ++G +G LG+G +++ A+PK+V+ L+G+ +
Sbjct: 396 VRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHG--DKRNLAIPKEVESLKGLKTVRA 453
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 454 ACGIWHTAAVVE 465
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 94/219 (42%), Gaps = 39/219 (17%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE-------------GRCYTWGRNERGQ 89
NL P + L G ++ V A C H AV VE G+ +TWG ++ +
Sbjct: 435 NLAIPKEVESLKG--LKTVRAACGIWHTAAV-VEVIVGYSSATSCSSGKLFTWGDGDKYR 491
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----G 145
LGHGDK Q+ PT V+ L Y ++ G S TV +T G G +GQLG+ G
Sbjct: 492 LGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADG 551
Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+ ++ R V E+ CGA LSS I G G+LGHG D E T
Sbjct: 552 KVPGMVDGELARTFVEEI---GCGAHHVAALSS--KTEIYTWGKGANGRLGHG-DVEDRT 605
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
P + AL + + VACG++ T +
Sbjct: 606 A-------------PTLVEALRDKQVKTVACGSSFTAVI 631
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 158/378 (41%), Gaps = 47/378 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P L V +D++ +A C H V +G ++WG G+LGHG P ++
Sbjct: 299 LFPKALESAVVLDVQNIA--CGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLI 356
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS- 161
LS I+ G HT VT G+ +G + G LG G+ + P V +
Sbjct: 357 DALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 416
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V++ +CG T ++S + G +G LGHG S+ L P
Sbjct: 417 IHVSSISCGPWHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SISL-------P 460
Query: 221 RAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKD 268
+ + +L G V+ ACG HT AV S G ++TWG G GRLGH +++
Sbjct: 461 KEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 520
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPK 323
+ VP V V P ++ G + G +Y ++G+L N D P
Sbjct: 521 KLVPTCVAAL----VEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPT 576
Query: 324 PLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ LS + + G H + + + +WG G LG+G ++S P V+ L
Sbjct: 577 RVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEAL 634
Query: 382 EGMHVISVACGYGHSLVI 399
+ V S+ACG + I
Sbjct: 635 KDKQVKSIACGTSFTAAI 652
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 105/259 (40%), Gaps = 35/259 (13%)
Query: 42 GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
GN VS P R+ PL G+ + ++ C H V G+ +T+G G LGHGD+
Sbjct: 399 GNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 456
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
P V L + +A G HT V E G +G G+LG G
Sbjct: 457 ISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 516
Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
++ P+ V LV ACG TV + + G P YGQLG+
Sbjct: 517 DKEAKLVPTCVAALVEPNFCQVACGHSLTV--ARTTSGHVYTMGSPVYGQLGN------- 567
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
LA P R L+ + ++ACG H + SK VYTWG G GRLGH
Sbjct: 568 ------PLADGKLPT-RVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 620
Query: 265 EQKDEWVPRRVDVFQRNNV 283
+ D P V+ + V
Sbjct: 621 DTDDRNSPSLVEALKDKQV 639
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+A+ + + +ACG H V +G +++WG GRLGH D P+ +D
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
N+ +++ G ++ G LY WG L +G++ W+ + L G
Sbjct: 361 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 416
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V + ++G +G LG+G +KS ++PK+V+ L+G+ +
Sbjct: 417 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSISLPKEVESLKGLRTVQA 474
Query: 390 ACGYGHSLVIVD 401
ACG H+ +++
Sbjct: 475 ACGVWHTAAVIE 486
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ YTWG GQLGHG P V L + + AG H++ V+E
Sbjct: 152 HALLLGGMGQVYTWGTGRLGQLGHGALEAELVPRPVEALLGLAMAQVAAGGWHSLCVSEA 211
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +GWN+ GQL P R + +V GAS L++
Sbjct: 212 GDLYIWGWNESGQLA----------LPSRTIAERE-------------KTVAGASGLSSC 248
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
P+ + TD D + QP P + +G ++K +CG+ HT V G
Sbjct: 249 SPEAKK--PATDG-----DGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDG 301
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+YTWG+G YG+LGH+ P+RVD F +N+L EAVI
Sbjct: 302 ELYTWGWGKYGQLGHKNTASLDQPQRVDYFT-DNLLHVEAVI 342
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 52/212 (24%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ G H + + G VYTWG G G+LGH + E VPR V+ + A ++A
Sbjct: 145 QLVLGAEHALLLGGMGQVYTWGTGRLGQLGHGALEAELVPRPVEALLGLAM----AQVAA 200
Query: 293 GSVNSSCTAGGGQLYMWG-----------------------------------KLKNNGD 317
G +S C + G LY+WG K +GD
Sbjct: 201 GGWHSLCVSEAGDLYIWGWNESGQLALPSRTIAEREKTVAGASGLSSCSPEAKKPATDGD 260
Query: 318 D------WMYPKP-LMDL-SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYG 368
+ P P L+DL SG + G+ H V D +WG +YG+LG+
Sbjct: 261 GDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDGELYTWGWGKYGQLGH--KN 318
Query: 369 QKSSAMPKKVDILEG--MHVISVACGYGHSLV 398
S P++VD +HV +V CG ++ V
Sbjct: 319 TASLDQPQRVDYFTDNLLHVEAVICGPWNTYV 350
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 41 DGNLVSPTRLRPLVGV-DI----RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
DG+L ++P + D+ + A C S H V +G YTWG + GQLGH +
Sbjct: 260 DGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDGELYTWGWGKYGQLGHKNT 319
Query: 96 IQRDRPTIVSELS 108
D+P V +
Sbjct: 320 ASLDQPQRVDYFT 332
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+ +G +TWG NE GQLG G + + P +V L ++ G SH + + DG
Sbjct: 104 ALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLG--NVRAVAVGISHMLALGNDGTV 161
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
A+G N GQLG G+ + + P V L + A + G + L+ + ++ GL
Sbjct: 162 WAWGKNNCGQLGDGTNVDSMTPVRVSGL-PRIVAISAGYNHN--LAIDDAGNVWTWGLND 218
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG GT+ + P P+ + LA + VA G++ ++A+ G ++
Sbjct: 219 CGQLGDGTN--------------ISSPNPKKVKGLA--NVTAVAGGSSFSLALKDDGTIW 262
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
WG G LG KD P V V NV+ I+AG S+ G L++W
Sbjct: 263 AWGSNVQGELGVGTTKD--CPLPVKVQGLTNVIR----IAAGGETSAAITNDGSLWVWGH 316
Query: 310 ---GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
GK + G+D P+ LS N++ +D G ++ + D S G Q+G+LG G
Sbjct: 317 NEQGKYISGGEDASSPRRASGLS--NVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTG 374
Query: 366 PYGQKSSAMPKKVDI 380
++ MP +V I
Sbjct: 375 NTYDRN--MPARVAI 387
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 38/225 (16%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++R VA G H +A+ +G + WG+N GQLG G + P VS L +I
Sbjct: 141 NVRAVAVGI--SHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAIS 196
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
AG +H + + + GN +G N GQLG G+ + P V+ L + VTA A G+ F+ L
Sbjct: 197 AGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGL-ANVTAVAGGSSFS--L 253
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + +I G G+LG GT TKD P P + L ++++A
Sbjct: 254 ALKDDGTIWAWGSNVQGELGVGT-----TKDC---------PLPVKVQGL--TNVIRIAA 297
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-------KDEWVPRR 274
G + A+ + G ++ W GH EQ +D PRR
Sbjct: 298 GGETSAAITNDGSLWVW--------GHNEQGKYISGGEDASSPRR 334
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P R+ L R VA H +A+D G +TWG N+ GQLG G I P V
Sbjct: 181 MTPVRVSGLP----RIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKV 236
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L+ + G S ++ + +DG A+G N G+LG G+ ++ P V+ L + +
Sbjct: 237 KGLA--NVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGLTNVIR 294
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G A+I N G GH +Y + E PR +
Sbjct: 295 IAAGGE---------TSAAITNDG--SLWVWGHNEQGKYISGG-------EDASSPRRAS 336
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-----FQ 279
L+ +V + GT + +A+++ G ++ G +G+LG D +P RV + F
Sbjct: 337 GLSNVKLVDI--GTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAIGSNVGFA 394
Query: 280 RNN 282
+NN
Sbjct: 395 QNN 397
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++V VA G +VA+ G V+TWG +G LG+ +D++VP+RV ++ +V A
Sbjct: 42 SVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPIYNVTSVDSCFAS 101
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++A + + G Y G+L +G + P M N+R + G H +G D
Sbjct: 102 VAALKDDGTVWTWGWNEY--GQL-GDGTTMDHNTPGMVGGLGNVRAVAVGISHMLALGND 158
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ +WG G+LG G S P +V L +++++ GY H+L I D NV
Sbjct: 159 GTVWAWGKNNCGQLGDGT--NVDSMTPVRVSGLP--RIVAISAGYNHNLAIDDAGNV 211
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 35/261 (13%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG G + P + LS +I + G
Sbjct: 87 VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA------- 288
CG +HT A+ +G V+T+G GGYG+LGH E PR+ VF+ + +A
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK--VFELMGSIVTQAACGRQHT 306
Query: 289 ---VISAGSVNSSCTAGGGQL 306
V S+G + S G GQL
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQL 327
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 34/351 (9%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P R V +R V GC H V V +G YT G N+ GQLGH
Sbjct: 15 GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS- 71
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 72 -RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G D
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
+ + ++ I G +++ G ++ +G+L +N + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 140/335 (41%), Gaps = 44/335 (13%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
GQLG R +P V L ++ + A ACG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLGLQ 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G++ E PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 120 GSE--------------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
YG+LG ++ + + + + P ++AG +S G ++ WG+
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYG 365
K N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V ACG H+ V
Sbjct: 278 STSHEIN--PRKVFELMGSIVTQAACGRQHTSAFV 310
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4052 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4108
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4109 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4168
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4227
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4228 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V + ++ G+ ++ A G +Y WG
Sbjct: 4274 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4329
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4330 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4363
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 4004 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4060
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4119
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4120 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4165
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4191
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4192 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4235
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4236 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4263
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ + AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ ++ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ V + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P V L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK V+ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLAL 629
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4291 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4349 LQGKNVRQISAGRCHSAAWT 4368
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 153/382 (40%), Gaps = 45/382 (11%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D V R D + P L + +D+ V G H V G +TWG G+L
Sbjct: 54 DTVIRSTAKAD--FLLPKPLESKLVLDVYHVDCGVK--HAALVTKNGEVFTWGEESGGRL 109
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
GHG + P +V L+ + G HT VT G +G H G LG+G+
Sbjct: 110 GHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDV 169
Query: 149 NEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ P + ++ +V +CG T ++S + G +G LGHG ++
Sbjct: 170 SHWIPKRISGVLEGHQVAYVSCGTWHTALVTS--RGQLFTFGDGTFGVLGHGNRESFSC- 226
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
PR + +L+G + VACG HT AV S G ++TWG
Sbjct: 227 -------------PREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGD 273
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGK 311
G RLGH +++ + P V + + S+ T G L M +G+
Sbjct: 274 GDKHRLGHGDKEPKLKPTCVASLIDYDFC---RIACGHSLTVGLTTSGQVLSMGNTVYGQ 330
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQK 370
L N D P + D+ G ++ + G+ H V + S +WG G LG+G +
Sbjct: 331 LGNPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDR 390
Query: 371 SSAMPKKVDILEGMHVISVACG 392
+P V+ L V +ACG
Sbjct: 391 K--IPTLVESLRDRAVRHIACG 410
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 143/339 (42%), Gaps = 48/339 (14%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G H +VT++G +G G+LG GS + + P V L + V ACG T +
Sbjct: 85 GVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAV 144
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVA 235
++ G G LG+GTD + P+ I+ L G + V+
Sbjct: 145 TTSGELYTWGDGTHNIGLLGNGTDVSHWI--------------PKRISGVLEGHQVAYVS 190
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------VFQRNNVLPPEA 288
CGT HT V S+G ++T+G G +G LGH ++ PR V+ + V A
Sbjct: 191 CGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAA 250
Query: 289 VISAGSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKP-----LMDLSGWNLRCMDSG 339
V+ SS + G+L+ WG +GD KP L+D + C S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSL 310
Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
VG +S +S G+ YG+LG P + +P ++ + G HV+ VACG H
Sbjct: 311 T----VGLTTSGQVLSMGNTVYGQLG-NP--RSDGKLPCLIEDIMGEHVVQVACGSYHVA 363
Query: 398 VIVDRTNVGE-------RLDQLDVYDGKASSQDNEEIDR 429
V+ +++ V RL DV D K + DR
Sbjct: 364 VLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDR 402
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ +TWG ++ +LGHGDK + +PT V+ L Y + G S TV +T G L+ G
Sbjct: 266 GKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMGN 325
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQ 191
+GQLG N + CL+ + V ACG+ L++ + + G
Sbjct: 326 TVYGQLG-----NPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTN--KSEVFTWGKGA 378
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
G+LGHG + +D + P + +L + +ACG+N T A+ +V
Sbjct: 379 NGRLGHG-----DVEDRKI---------PTLVESLRDRAVRHIACGSNFTSAICQHKWV 423
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
G G++L G+T + +G + DG L P + ++G + V C S H +
Sbjct: 312 VGLTTSGQVLSMGNTVYGQLGNPRS--DGKL--PCLIEDIMGEHV--VQVACGSYHVAVL 365
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
+ +TWG+ G+LGHGD R PT+V L ++ G + T + +
Sbjct: 366 TNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQ 419
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 97.1 bits (240), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
++GQLG+ + + PT + K K + G SH++ +T++G +G N GQLG G
Sbjct: 317 QKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQG 376
Query: 146 SIRNEIEPSPVRCLVSEVTATA-CGADFTVWLSSVEGASILNAGLPQYGQLGHG--TDNE 202
++++P+ ++ EV AT+ C D S E + G QY +LGHG TD
Sbjct: 377 HRNDQLKPT---MIIIEVMATSICSGDQHSAFISDE-KELYTWGNGQYFRLGHGVTTDEL 432
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
Y P+ + L + V+CG HT+A+ ++G+VY WG G G+LG
Sbjct: 433 Y----------------PKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLG 476
Query: 263 HRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+E K +P RV SAG ++S G LY WG K
Sbjct: 477 VQENNKSLHLPTRV---------------SAGGLHSMALTDQGILYSWGSSK 513
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N+ PT L LV +F+ C S H +A+ G+ +TWG+N RGQLG G + + +PT
Sbjct: 328 NVYEPTEL--LVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385
Query: 103 -IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
I+ E+ I +G H+ ++++ +G ++ +LG G +E+ P V L
Sbjct: 386 MIIIEVMATSI---CSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLED 442
Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
VT +CG T+ +++ EG + G G+LG +N+ S+ L
Sbjct: 443 VYVTHVSCGMTHTLAITN-EGF-VYAWGDGMSGKLGVQENNK------SLHLP------- 487
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEW-VPRRV 275
+V+ G H++A+ +G +Y+WG G LG R+ KD + +P+++
Sbjct: 488 -----------TRVSAGGLHSMALTDQGILYSWGSSKGGVLGIGFQRDNKDCYSLPQKI 535
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN---------------------KHG 140
T ++E K IK G HT+V+T+ G FG + G
Sbjct: 260 TEINEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKG 319
Query: 141 QLGSGSIRNEIEPS-----PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
QLG+ + N EP+ P R + ACG+ ++ L+ + I G GQL
Sbjct: 320 QLGNENFVNVYEPTELLVWPKRKFIQ----VACGSSHSMALT--DNGQIFTWGKNTRGQL 373
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G G N+ + +P I +A + G H+ + + +YTWG
Sbjct: 374 GQGHRND------------QLKPTMIIIEVMA----TSICSGDQHSAFISDEKELYTWGN 417
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
G Y RLGH DE P++V V + V +S G ++ G +Y WG
Sbjct: 418 GQYFRLGHGVTTDELYPKKVVVLEDVYV----THVSCGMTHTLAITNEGFVYAWG----- 468
Query: 316 GDDWMYPKPLMDLSGWNLRC---MDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
D M K + + +L + +G +H D + SWG ++ G LG G
Sbjct: 469 --DGMSGKLGVQENNKSLHLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRL------------GHREQKDEWVPRR-VDV 277
I V+CG +HT+ + +G ++ +G G G+L + QK + V+V
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329
Query: 278 FQRNNVL--PPEAVI--SAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMD 327
++ +L P I + GS +S GQ++ WGK + + +D + KP M
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQL--KPTMI 387
Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
+ + SG+ H F+ + +WG+ QY LG+G PKKV +LE ++V
Sbjct: 388 IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV--TTDELYPKKVVVLEDVYV 445
Query: 387 ISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEE 426
V+CG H+L I TN G D GK Q+N +
Sbjct: 446 THVSCGMTHTLAI---TNEGFVYAWGDGMSGKLGVQENNK 482
Score = 40.0 bits (92), Expect = 3.2, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVS--EVT 164
K KI +H + ++ G + ++G NK+ QLG G + N I P ++ + +
Sbjct: 788 KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHI-PQKIQGALETKRII 846
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ C F+ L+ + I G G LGH N Y S K+ + P
Sbjct: 847 MSTCSDRFSALLT--DKGEIWTFGTSDSGVLGHDEKNYYVV--SEPKMINDIPP------ 896
Query: 225 ALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLG 262
++ +A G +A+ + K +Y WG YG+LG
Sbjct: 897 ------MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLG 929
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 40/280 (14%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIV 104
P +P+ V C S H +A+ + ++WG + G LG G D I R I+
Sbjct: 285 PKHTKPITQV-------ACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLII 337
Query: 105 SELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
+ Y I+ G+ H++ +T L +G + G+LG G + + P + L +
Sbjct: 338 EKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKK 397
Query: 164 -TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ G + +S E ++ G YG+LGHG D ++ +P+
Sbjct: 398 PIFISAGESHSAAIS--EKLNLYTWGTGTYGRLGHGMDT--------------SEKKPKL 441
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV---PRRVDVFQ 279
I L I+ V+CG HT+A+ +G VY +G G YG+LG ++ E V P ++ F
Sbjct: 442 IEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKIS-FY 500
Query: 280 RNNVLPPEAVI---------SAGSVNSSCTAGGGQLYMWG 310
+ V P E ++ +AG +S C A G++Y WG
Sbjct: 501 KVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWG 540
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 160/387 (41%), Gaps = 57/387 (14%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
C H + + + + TWG+ + G+LGHGD+ P + +LSK K AG SH+
Sbjct: 350 ACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSA 409
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++E N +G +G+LG G +E +P + L E+ +CGA T+ ++
Sbjct: 410 AISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG--QG 467
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLA-YEAQPRPRAIAALAGETIVKVACGTNHT 241
++ G +YG+LG K++ Y+ P+ + + A G NH+
Sbjct: 468 TVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHS 527
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV---------------DVFQRNNVLPP 286
+ + G +Y+WG+ G G LG ++ +E +P + ++ QR ++
Sbjct: 528 LCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQE 587
Query: 287 EAV------ISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDWMYPK------------ 323
E ++ G +N+ GG++Y+ +G+L + D + K
Sbjct: 588 ETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDN 647
Query: 324 ----------PLMDLSG---WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
L+ G + + G H F + + WG G+LG G +
Sbjct: 648 SQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLG-FVS 706
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHS 396
+A P + + ++ +ACG +S
Sbjct: 707 DFTAEPTLIRQIAHKNIQMIACGDNYS 733
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 219 RPRAIAALA-GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
RP AI + I +VACG+ H +A+ +++WG G YG LG + D + PR + +
Sbjct: 278 RPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLII 337
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGW 331
+++ E I+ G +S C ++ WG+ + + DD + PK + DLS
Sbjct: 338 EKKDYTYFIEG-IACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ +G H + + +WG YG LG+G S PK ++ L+ +I V+
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGM--DTSEKKPKLIEDLDQYEIIHVS 454
Query: 391 CGYGHSLVI 399
CG H+L I
Sbjct: 455 CGAFHTLAI 463
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 100 RPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
RPT + K I + G +H + +TED ++G ++G LG G+ + EP R
Sbjct: 278 RPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEP---RH 334
Query: 159 LVSE-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
L+ E + ACG ++ L+ IL G Q G+LGHG +++
Sbjct: 335 LIIEKKDYTYFIEGIACGKYHSMCLT--RKKKILTWGQGQGGRLGHGDEDDVLV------ 386
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P+ I L+ + + ++ G +H+ A+ K +YTWG G YGRLGH E
Sbjct: 387 --------PKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKK 438
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
P+ ++ + ++ +S G+ ++ G G +Y +G+
Sbjct: 439 PKLIEDLDQYEIIH----VSCGAFHTLAITGQGTVYAFGQ 474
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+T ACG+ L+ E + + + G QYG LG GT ++ +PR
Sbjct: 291 ITQVACGSAHI--LAITEDSELFSWGSGQYGALGFGTRDDI------------FEPRHLI 336
Query: 223 IAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQR 280
I ++ +ACG H++ + K + TWG G GRLGH ++ D VP+ + D+ ++
Sbjct: 337 IEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLR 334
+ ISAG +S+ + LY W G+L + D PK + DL + +
Sbjct: 397 KPIF-----ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEII 451
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGY------GPYGQ-------KSSAMPKKVDI 380
+ G H + + ++G +YG+LG G + + K P+++ +
Sbjct: 452 HVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLV 511
Query: 381 LEGMHVISVACGYGHSLVI 399
+ I A GY HSL +
Sbjct: 512 QDKNEAILAAAGYNHSLCL 530
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 173/423 (40%), Gaps = 76/423 (17%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKI 112
V I ++A G H A+ + WGRN+ GQLG G D PT++ +++ I
Sbjct: 668 VRINYIACG--GEHIFAISRMNELFGWGRNDEGQLGLG--FVSDFTAEPTLIRQIAHKNI 723
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACG 169
+ G +++ V+ G G ++G+LG G + + + ++ L + + + ACG
Sbjct: 724 QMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNL-APIKSVACG 782
Query: 170 ADFTVWLSSVEGASILNAGLPQ------YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ + ++ + G+ GQLG G+ +DS+V P+ I
Sbjct: 783 PNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGS-----KEDSNV---------PKKI 828
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
A E KVACG + ++ + VY WG Y D + + VD+ Q
Sbjct: 829 HN-AKERFKKVACGQDFSIGLTYGNQVYLWGNNKYFC-------DSKITKDVDIPQLLQA 880
Query: 284 LPPEAVISAGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCM 336
L + C+ G++ +WG ++K N + + ++ + +R
Sbjct: 881 LEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKF 940
Query: 337 D------SGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
D S +H V S +WGHA+ G LG K++ +E + V S
Sbjct: 941 DFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAK-------IEPILVQS 993
Query: 389 VACGYGHSLVIVDRTNVGERLDQLDVYDGK-ASSQDNEEIDRNSTVPPKKGAAKVSNNSK 447
+ H ++ +R N+ E G+ A ++ + + S+ P +K +SN +
Sbjct: 994 I-----HDIMQKNRQNLKE---------GRGAGDEEIKNLQYESSKPAQKDDKMMSNIQE 1039
Query: 448 KRK 450
+RK
Sbjct: 1040 ERK 1042
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD----- 74
GEL G+ +G + G L+S T ++ L + + C H +A+
Sbjct: 740 GELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIK----SVACGPNHMLAIADYNPD 795
Query: 75 ---VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+G CY+WGRN +GQLG G K + P + +K + KK G+ ++ +T
Sbjct: 796 HPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHN-AKERFKKVACGQDFSIGLTYGNQV 854
Query: 132 LAFGWNKHGQLGSGSIRNEIE-PSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGL 189
+G NK+ I +++ P ++ L +++ AC F L+ + IL G
Sbjct: 855 YLWGNNKY--FCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLN--DKGEILIWG- 909
Query: 190 PQYGQLGHGTD----NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ TD N+ K S LA P + ETI + G NH+ AV
Sbjct: 910 ------SYLTDRIKQNQKKDKKSQNHLAITKFPMRK--FDFLMETI---SAGQNHSAAVS 958
Query: 246 SKGYVYTWGFGGYGRLGHREQK 267
K +YTWG GRLG E++
Sbjct: 959 VKRSLYTWGHAEGGRLGLNEKE 980
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 103/300 (34%), Gaps = 74/300 (24%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV------------------------ 104
H + + G+ Y+WG N +G LG + P +
Sbjct: 526 HSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLK 585
Query: 105 -SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIR----------- 148
E Y++ + G +TV +T G FG N +GQL + R
Sbjct: 586 QEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNN 645
Query: 149 ---NEIEPSPVRCLVS-------EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
++ S L+ + ACG + +S + + G GQLG G
Sbjct: 646 DNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMN--ELFGWGRNDEGQLGLG 703
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+++ + P I +A + I +ACG N++ AV + G ++ G
Sbjct: 704 FVSDFTAE-------------PTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLEN 750
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLP-------PEAVISAGSVNSSCTAGGGQLYMWGK 311
G+LG + + + Q N+ P P +++ N G Y WG+
Sbjct: 751 GKLGLGQALKKGFLLSFTLIQ--NLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGR 808
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4048 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4104
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4105 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFG 4164
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4165 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVST-DGSMVWAFGDGDYGK 4223
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4224 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4269
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P++V V + ++ G+ ++ G +Y WG
Sbjct: 4270 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLAITSTGDVYAWGSNSE 4325
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4326 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4359
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 136/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ S + ++ G++ T V+ +G LA
Sbjct: 4000 GKCDVYLWGAGRHGQLAEAG---RNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLAC 4056
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4115
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V + G ++
Sbjct: 4116 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMF 4161
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4162 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4187
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V D S + ++G YG+LG G
Sbjct: 4188 ----------------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTA 4231
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4232 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 4259
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G G E P+ V+ ++ IS G + + ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLVEELAATRIVD----ISIGDSHCLALSHDNEVY 687
Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
WG N+ PK + L G ++ + +G H + D ++W
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
+L + S + + D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 79/377 (20%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + + +++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG + Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVP--------------------------RRVDVF--------- 278
G G +GRLGH + +P R V F
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 279 --QRNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
N V P+ + + AGS +S GQ+Y WG ++ +
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
PK + +L+ + + G+ H + D+ +WG+ G+ G G PKKV
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714
Query: 381 LEGMHVISVACGYGHSL 397
L+G+ + ++ G HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ + LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLVEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV ++ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +V+E +G N QL G+ ++P T A + ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ G YG+LG G N +T KL +E + +++ G HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A ++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527
Query: 302 GGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-S 353
G+LY WG +L + + + P + D+S N+ + G+ H + D + S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 586 FGGGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+++
Sbjct: 4287 PQQVPVLAGVVIEDVAVG--AEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4344
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L I++ AGR H+ T
Sbjct: 4345 LQGKNIRQISAGRCHSAAWT 4364
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP +V EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 160/374 (42%), Gaps = 51/374 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ + G H V +G +TWG + G+LGHG + RP
Sbjct: 290 DVLTPKPLESDVVLDVHQIGPG--DRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 347
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ--LGSGSIRNEIEPS----PV 156
+V L+ + G H+ V+ G+ +G HG LG G+ + P P+
Sbjct: 348 LVESLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPL 407
Query: 157 RCLVSEVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
L +V + ACG W S++ ++ + G ++G LGHG +DS +AY
Sbjct: 408 EGL--QVVSVACGT----WHSALATSNGKLFTIGDGRFGVLGHG------DRDS---VAY 452
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHR 264
P+ + L+G +KVACG H+ A+ S ++TWG G RLGH
Sbjct: 453 -----PKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHV 507
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
++ P V N V ++ + T G M +G+L N D
Sbjct: 508 NKETYLEPTCVAAVAEYNF---HQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGK 564
Query: 321 YPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + L G + + G H + + S +WG G LG+G + S P V
Sbjct: 565 VPILVRGKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKS--PTMV 622
Query: 379 DILEGMHVISVACG 392
+ L+ H+ +++CG
Sbjct: 623 EALKDRHIKNISCG 636
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 47 PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P R+ PL G+ + V+ C + H G+ +T G G LGHGD+ P V
Sbjct: 400 PKRVSGPLEGLQV--VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQ 457
Query: 106 ELSKYKIKKAGAGRSHTVVVTE-----DGNSLA---FGWNKHGQLGSGSIRNE--IEPSP 155
LS +K K G H+ + E N+ A F W Q G + E +EP+
Sbjct: 458 LLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTC 517
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V + ACG TV L++ + G YGQLG+ D V +
Sbjct: 518 VAAVAEYNFHQVACGYTMTVALTT--SGHVFTMGGTAYGQLGNPNS------DGKVPILV 569
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ L GE + +++CG NH + S+ +YTWG G GRLGH + D+ P
Sbjct: 570 RGK--------LVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTM 621
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+ + ++ IS GS +SC L+ W
Sbjct: 622 VEALKDRHI----KNISCGSTFTSCIC----LHKW 648
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ G H V +G V+TWG GRLGH +KD P V+
Sbjct: 294 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLA 353
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
NV ++ G +S + G L+ WG L +G D W+ + L G
Sbjct: 354 ITNV----TFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 409
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H ++ + G ++G LG+G + S A PK+V +L G I V
Sbjct: 410 LQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHG--DRDSVAYPKEVQLLSGHKAIKV 467
Query: 390 ACGYGHSLVIVD 401
ACG HS I++
Sbjct: 468 ACGVWHSAAIIE 479
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+ +
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYV 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 34/351 (9%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P R V +R V GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 71 SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G D
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
+ + ++ I G +++ G ++ +G+L +N + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A ACG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V VACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 161/365 (44%), Gaps = 51/365 (13%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY--KIKKAGAGRSHT 122
C H + + GR + G N+ GQLG G + I E+S + K+ + AG H+
Sbjct: 80 CGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPI--EVSGFDEKVVEVSAGNHHS 137
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLV-SEVTATACGADFTVWLSSV 179
VT DG A+G N GQLG G ++ +P V CL + V A G++ ++ ++
Sbjct: 138 CAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSI--ATT 195
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-EAQPRPRAIAALAGETIVKVACGT 238
E +L+ G G+LGHG K S + + ++ PR I L G I ++A G
Sbjct: 196 EEGEVLSWGAAGAGRLGHG------HKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGM 249
Query: 239 NHTVAVDSKGYVYTWGF---GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
H+ +D KG ++ +G G+GR G DE P V+ +P ++ G
Sbjct: 250 LHSACIDEKGTLFIFGQKTEKGFGRSG-----DELRPTVVE------EVPFSEEVACGGY 298
Query: 296 NSSCTAGGGQLYMWGKLKN-----NGDDW----------MYPKPLMDLS-GWNLRCMDSG 339
++ G LY WG +N G D ++ P+ +S GW + SG
Sbjct: 299 HTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG 358
Query: 340 NMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+ + GA+ + GH+ G+LG+G P V+ + + V+CG+ H+
Sbjct: 359 GDIYTWGWGGANGTFFEEGHSSGGQLGHG--NDVDYFEPMMVEFGKNARAVHVSCGFNHT 416
Query: 397 LVIVD 401
I +
Sbjct: 417 GAIFE 421
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 137/341 (40%), Gaps = 44/341 (12%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSEL--------SKYKIKKAGAGRSHTVVVTEDGNSLA 133
WG + G+LG G R PT G +HT+ +TE G A
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 134 FGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G N GQLG G S+ + +EP V +V + G + +++ + G
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTA--DGKLFAWGRNSS 154
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQLG G K A + PR + LA + VA G+ H++A +G V +
Sbjct: 155 GQLGLG------------KRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLS 202
Query: 253 WGFGGYGRLGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
WG G GRLGH + E+ PR + + I+AG ++S+C
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKI----KRIAAGMLHSACIDEK 258
Query: 304 GQLYMWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
G L+++G+ G D + P + ++ + G H V DS SWG +
Sbjct: 259 GTLFIFGQKTEKGFGRSGDELRPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSNE 316
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G LG G S K + + V V+CG+ H+ VI
Sbjct: 317 NGCLGLGGTDMVRSPEVLKSSLFK-FPVSKVSCGWKHTAVI 356
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYM 308
WG G YGRLG + W P F P A ++ G ++ G+++
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 309 -----WGKLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHF-VGADSSCISWGHAQYG 360
+G+L G + +++SG++ + ++ +GN H V AD +WG G
Sbjct: 97 AGLNDFGQL-GIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSG 155
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+LG G K + P+KVD L V VA G HS+ + V
Sbjct: 156 QLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEV 200
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 48/262 (18%)
Query: 175 WLSSVEGASILNAGLP--------------QYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
W S A +L++G P YG+LG G ++ S + RP
Sbjct: 11 WRSQRRAARMLSSGEPAAGRRRVAALWGNGDYGRLGMGA---LESRWSPTACPFFLTGRP 67
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQ 279
+ +ACG HT+ + G V+ G +G+LG + P V F
Sbjct: 68 ---GDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD 124
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
V +SAG+ +S G+L+ WG+ K G P+ + L+
Sbjct: 125 EKVV-----EVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA 179
Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM----------PKKVDI 380
++ + G+ H + +SWG A G LG +G K+S + P+ +
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG---HGHKTSILGFSITTSEYTPRLIKN 236
Query: 381 LEGMHVISVACGYGHSLVIVDR 402
L+G+ + +A G HS I ++
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEK 258
>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
plexippus]
Length = 733
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 180/442 (40%), Gaps = 63/442 (14%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H + +GR + +G N GQLG G K + RP+ V L ++ GR
Sbjct: 57 IVAISCGDEHSAVICEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRATFVACGR 116
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+HTV VT+ + G N GQLGSG + + P V V+ V + G++ T L+
Sbjct: 117 AHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSVPQYVDLEVT-VKQVSAGSNHTALLT-- 173
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E + G GQLG G D + +K E+I V CG
Sbjct: 174 EDGRVFVCGSNSEGQLGLGEDRRSALSFTELKFM---------------ESIAFVECGYY 218
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
HTV + +KG V+ G +LG + +VP+ VLP + I + ++
Sbjct: 219 HTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQ---------VLPLDVHIKSACCGAN 269
Query: 299 CT----AGGGQLYMWGKLKNNGDDWMYPKPLMDLS------------GWNLRCMDSGNMH 342
T ++ +G N PK +++++ G+ L+ + G MH
Sbjct: 270 HTFLLSMDESKILAFGS--NEKGQLGMPKEVVNVTLPTEIDMEKMFDGYQLKLVACGAMH 327
Query: 343 H-FVGADSSCISWGHAQYGELGYGPYGQKSSA-------MPKKVDILEGMHVISVACGYG 394
FV + + G A++ +L +++ P +V + G + +VACG
Sbjct: 328 TAFVTDNGLLYTCGEARHNKLCLEETDDNTNSNDLPNQYTPMRVTAMNGFVIDNVACGGC 387
Query: 395 HSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRNSTVPPKKGAAKVSNNSKKRKKSKD 454
H+L+ + G +D + D S++N + P +K A K + D
Sbjct: 388 HTLLTATK---GSNVDFTN-NDFSIISEENRPVSLTELPPLQKLPAM-----NKNEDIAD 438
Query: 455 SSEEEEEEENSDYESDDSEEQA 476
E E +N+D + ++ E+
Sbjct: 439 FVNENTEAKNADLMNGNNNEET 460
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 31/233 (13%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
V ++ V+AG S H + +GR + G N GQLG G+ DR + +S ++ K ++
Sbjct: 157 VTVKQVSAG--SNHTALLTEDGRVFVCGSNSEGQLGLGE----DRRSALS-FTELKFMES 209
Query: 116 GA----GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
A G HTV +T G G N++ +LG + + + V L + + CGA+
Sbjct: 210 IAFVECGYYHTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLPLDVHIKSACCGAN 269
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T +L S++ + IL G + GQLG + T + + + G +
Sbjct: 270 HT-FLLSMDESKILAFGSNEKGQLGMPKEVVNVTLPTEIDME----------KMFDGYQL 318
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD---------EWVPRRV 275
VACG HT V G +YT G + +L E D ++ P RV
Sbjct: 319 KLVACGAMHTAFVTDNGLLYTCGEARHNKLCLEETDDNTNSNDLPNQYTPMRV 371
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 36/243 (14%)
Query: 20 GELLFCGSTCWDAVGR---RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
G + CGS +G R+ AL S T L+ + I FV G H V + +
Sbjct: 176 GRVFVCGSNSEGQLGLGEDRRSAL-----SFTELKFMES--IAFVECGYY--HTVFITAK 226
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTI----VSELSKYKIKKAGAGRSHTVVVTEDGNS- 131
G + G NE +LG IQ + V L + IK A G +HT +++ D +
Sbjct: 227 GAVFVTGDNENQKLG----IQNTSSILYVPQVLPLDVH-IKSACCGANHTFLLSMDESKI 281
Query: 132 LAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILN 186
LAFG N+ GQLG + N P+ + ++ ACGA T +++ + +
Sbjct: 282 LAFGSNEKGQLGMPKEVVNVTLPTEIDMEKMFDGYQLKLVACGAMHTAFVT--DNGLLYT 339
Query: 187 AGLPQYGQLG-HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G ++ +L TD+ N+ D Q P + A+ G I VACG HT+
Sbjct: 340 CGEARHNKLCLEETDDNTNSND------LPNQYTPMRVTAMNGFVIDNVACGGCHTLLTA 393
Query: 246 SKG 248
+KG
Sbjct: 394 TKG 396
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 35/256 (13%)
Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
EPS + A +CG + + + E + G +GQLG G +E
Sbjct: 46 EPSHFFIKNDPIVAISCGDEHSAVIC--EKGRVFVFGANAWGQLGLGHKDEVT------- 96
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
RP + L VACG HTV V +Y+ G G+LG + + V
Sbjct: 97 -------RPSCVKFLKPHRATFVACGRAHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSV 149
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
P+ VD+ V + +SAGS +++ G++++ G + G + LS
Sbjct: 150 PQYVDL----EVTVKQ--VSAGSNHTALLTEDGRVFVCGS-NSEGQLGLGEDRRSALSFT 202
Query: 332 NLRCMDS------GNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE-G 383
L+ M+S G H F+ A + G + +LG Q +S++ +L
Sbjct: 203 ELKFMESIAFVECGYYHTVFITAKGAVFVTGDNENQKLGI----QNTSSILYVPQVLPLD 258
Query: 384 MHVISVACGYGHSLVI 399
+H+ S CG H+ ++
Sbjct: 259 VHIKSACCGANHTFLL 274
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+ +
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYV 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 33/326 (10%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH + R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG G + + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIEC-------------QKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
+ + G ++ WG +G+LG ++ D +VP + + ++ A+ G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
V + G GQL N+ + P+ + +L G + + G H FV +
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLL 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 45/367 (12%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
++P L G I V G + H A+D EG+ Y WG NE +LG G+ + + P
Sbjct: 99 LTPKLTEALEGKAITHVEFG--ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPRE 156
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW-----NKHGQLGSGSIRNEIEPSPVRC 158
V L KI G T V EDG ++GW G LG ++E P +
Sbjct: 157 VEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTT 216
Query: 159 LVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
LV + + CG TV L+ + I G +YG+LG+G +
Sbjct: 217 LVDQGVPIATVECGEFHTVALT--KDGEIWAWGNGEYGRLGNGESDTCEV---------- 264
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG------FGGYGRLGHREQKDE 269
P I + + +V +A G + + A+ KG +Y+WG G G L E
Sbjct: 265 ----PEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIE 320
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
+P V+ F N +L + I+AG +++ G+LYMWG W+ P + ++
Sbjct: 321 SIPVLVEAF--NGLLVKQ--IAAGYDHAAAVTEDGRLYMWG-----AKIWIEPHEMTAVN 371
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ + G + + D ++G LG+G +K+ P K+ L G+++ S
Sbjct: 372 EHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGD--RKNQLQPVKIQALAGVNITS 429
Query: 389 VACGYGH 395
V+CG H
Sbjct: 430 VSCGDYH 436
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 103/244 (42%), Gaps = 27/244 (11%)
Query: 79 CYTWGRNERGQLGHGDKI--------QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
YTWG GQLGHG I + P + L I G SH+ + E+G
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 131 SLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
+G N++ +LG G S E P V L ++ +CG FT + +
Sbjct: 131 LYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDE-------DGK 183
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTNHTVAVDS 246
+ +G G + K +P PR + L G I V CG HTVA+
Sbjct: 184 MYSWGWGGSTMKGAGGLGHAGGK----DEPTPRLLTTLVDQGVPIATVECGEFHTVALTK 239
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
G ++ WG G YGRLG+ E VP ++ F ++NV+ I+AG S G+L
Sbjct: 240 DGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVS----IAAGRDFSFALTDKGEL 295
Query: 307 YMWG 310
Y WG
Sbjct: 296 YSWG 299
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P L LV + C H VA+ +G + WG E G+LG+G+ + P +
Sbjct: 210 TPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE 269
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRC-- 158
SK + AGR + +T+ G ++G N QLG G + N IE PV
Sbjct: 270 FFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYN-IESIPVLVEA 328
Query: 159 ----LVSEVTA--------TACGADFT----VWLSSVEGASILNAGLPQYG-----QLGH 197
LV ++ A T G + +W+ E ++ + Q +G
Sbjct: 329 FNGLLVKQIAAGYDHAAAVTEDGRLYMWGAKIWIEPHEMTAVNEHKMTQVACGRQYTVGL 388
Query: 198 GTDNEYNT--KDSSVKLAY---EAQPRPRAIAALAGETIVKVACGTNHTVAV 244
D + T K SS L + + Q +P I ALAG I V+CG H A+
Sbjct: 389 TDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAI 440
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 24/235 (10%)
Query: 48 TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T PL G++ R + C H +A+ +G+ + WG N GQLG ++ P +
Sbjct: 107 TECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQ 166
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV-SE 162
L + + AG +H+ V++ G + FGW N GQLG G + P+ V L +
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSG--VVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK 224
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ + +CG + T L+ +G ++ G +GQLGH +++ + PR
Sbjct: 225 IVSISCGGEHTAALA--KGGTVFTFGSGGFGQLGHN--------------SFKDEHHPRL 268
Query: 223 IAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
+A L G + +V CG NHT V+ S +Y++G G G+LG+ EQ + VP VD
Sbjct: 269 VAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVD 323
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L G +G RK SP L+ L G+ + ++AG H + + G
Sbjct: 137 GQLFVWGENALGQLGLRKE--QAGTQSPRHLQSLCGIPVAQISAG--GNHSFVLSLSGVV 192
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
+ WG N GQLG GD R PT+V+ L + KI G HT + + G FG
Sbjct: 193 FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGF 252
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S ++E P V L S+V+ CG + T+ +S+ I + G GQLG+G
Sbjct: 253 GQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTL-VSTASPKLIYSFGCGMQGQLGNG 311
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
+ SV L + QP TI K+ G NH+ A+ K
Sbjct: 312 EQVK-----QSVPLPVD-QPTEYN----DEYTIQKLVAGENHSFALYFK 350
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + +L G + +++ G NH+ + G V+ WG G+LG + D +VP V+ +
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLK 221
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLSGWNL 333
R ++ IS G +++ A GG ++ +G+L N+ D +P+ + +L G +
Sbjct: 222 RKKIVS----ISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKV 277
Query: 334 RCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMP 375
+ G H V S + S+G G+LG G ++S +P
Sbjct: 278 SQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLP 321
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 97.1 bits (240), Expect = 2e-17, Method: Composition-based stats.
Identities = 91/358 (25%), Positives = 140/358 (39%), Gaps = 79/358 (22%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L DI V+ G H AV G TWG E GQLGHGD + P ++
Sbjct: 682 PIKLESLT--DIVVVSIGFY--HSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQS 737
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + I + G HT+ +T++G +G +++GQLG G +P PV L V
Sbjct: 738 LTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQ 797
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ L++ + + G +G A P + +
Sbjct: 798 IASGSTHCAVLTNSKEVLVFGNG----AAMG----------------AASIISIPTLVPS 837
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L I K+ CG T A+ G VYTWG G LGH + E P+ V+ + ++
Sbjct: 838 LKYLHIDKLCCGHYSTAAISECGDVYTWGTG--QELGHGNNQTESTPKLVEALRNQSIRQ 895
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
IS G +++ G+++ GK DS
Sbjct: 896 ----ISCGGRHTAFLTDSGRIFTSGK-------------------------DS------- 919
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
+G+LG+ Q PKK++ L ISV+CG +++ + D T
Sbjct: 920 -------------FGQLGHQAGDQNK---PKKIESLTKTTFISVSCGENYNIALFDTT 961
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR-----LGHREQKDE 269
++QP P + I ++ G+ ++ A+ G VY WG G LG + +D+
Sbjct: 620 QSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQ 679
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPK 323
+P +++ L V+S G +S+ G+L WG + +GD + + PK
Sbjct: 680 LLPIKLE------SLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPK 733
Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
+ L+ + + + G H + + +WG ++YG+LG G + MP V LE
Sbjct: 734 VIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP--VTALE 791
Query: 383 GMHVISVACGYGHSLVIVDRTNV 405
+V+ +A G H V+ + V
Sbjct: 792 KYNVLQIASGSTHCAVLTNSKEV 814
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 141/363 (38%), Gaps = 77/363 (21%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D + PT P + I + G H +A+ G Y WG +E GQ G G+K +
Sbjct: 125 DKRIYYPTLCEPAQSLGIVKIRTG--RQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHL 182
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P + I G H+ V++DG +G+ GQLG +E++P + +
Sbjct: 183 PIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIR 242
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
E ++ CG DFT L+ EG + G + GQLGHG + + S V L
Sbjct: 243 GEGISRVTCGTDFTGLLNETEG-RLFTFGNGEAGQLGHG-ERGLCLEPSVVPL------- 293
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ + +VA G H +A+ G ++WG+G GRLGH +D
Sbjct: 294 ---------DNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATED----------- 333
Query: 280 RNNVLPPEAVISAGSVNS--SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
L PE + + G S +AGGG +L +
Sbjct: 334 ---FLKPEPIPTLGPAVGVVSVSAGGGH--------------------------SLALTE 364
Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHS 396
SG ++ WG G LG G +SS M P + L V+ CG HS
Sbjct: 365 SGQVY----------GWGFNASGRLG---LGNESSVMTPTLIKALADKRVLRAICGLDHS 411
Query: 397 LVI 399
L I
Sbjct: 412 LFI 414
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 137/338 (40%), Gaps = 37/338 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
YT G QLG GD P V EL A AG + ++T + W
Sbjct: 56 YTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHE--LYYWGS 113
Query: 139 HGQLGSGSIRNEIEPS-PVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G +R + P C ++ + G + LS + + G ++GQ
Sbjct: 114 SGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALS--KNGEVYIWGNSEFGQ 171
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G G EAQ P + ++IV V+CG +H+ AV G V+TWG
Sbjct: 172 TGLGNK--------------EAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWG 217
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
+G G+LGH +DE P+ + V + + V G+L+ +G +
Sbjct: 218 YGIDGQLGHNGTEDELKPKELTVIRGEGI---SRVTCGTDFTGLLNETEGRLFTFGNGEA 274
Query: 314 ---NNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
+G+ + +P ++ L N++ + +G H + D SWG + G LG+G
Sbjct: 275 GQLGHGERGLCLEPSVVPLD--NVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHG--A 330
Query: 369 QKSSAMPKKVDIL-EGMHVISVACGYGHSLVIVDRTNV 405
+ P+ + L + V+SV+ G GHSL + + V
Sbjct: 331 TEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQV 368
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR + + P + P +G + V+ H +A+ G+ Y WG N G+
Sbjct: 320 WGEDGRLGHGATEDFLKPEPI-PTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGR 378
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
LG G++ PT++ L+ ++ +A G H++ +T+
Sbjct: 379 LGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416
>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2063
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 71/368 (19%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
I+ C H A+ +G +TWG G+LGHGD+ ++ P +V EL I
Sbjct: 9 IKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVAL 68
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN---EIEPSP------VRCLVSEVTATAC 168
G HT +E G ++G G LG G ++ +I+ +P R L +VT AC
Sbjct: 69 GERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVAC 128
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
GA T+ ++ + I +G D + + P++I ALAG
Sbjct: 129 GAYHTLCTTADKLTYI-------WG------DGGHGVLGQGGDFGRTIEWTPQSIGALAG 175
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ ++ACG H + G +YTWG G GRLGH +++D P +V + ++
Sbjct: 176 RGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQ--- 232
Query: 289 VISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
I+ G + + + G++++ G+L +G+ N H
Sbjct: 233 -IACGFAHMAALSDKGEVFVCGTGCGRLGLDGEQ------------------GKSNPEHT 273
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
A+ +P++V+ L G+ ++ VACG ++V+ + +
Sbjct: 274 EVANQK-----------------------IPRRVEPLRGLQILQVACGMISTIVLQNTQD 310
Query: 405 VGERLDQL 412
+ L L
Sbjct: 311 EQQSLSTL 318
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+A+L I +VACG +HT A+ +KG ++TWG G YGRLGH ++ D+ PR V N
Sbjct: 3 VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTN 62
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKP-LMDLSGWN 332
++ ++ G +++ + G+LY WG GD + P L++
Sbjct: 63 IVG----VALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRV 118
Query: 333 LR----CMDSGNMHHF-VGADSSCISWGHAQYGELGYGP-YGQKSSAMPKKVDILEGMHV 386
LR + G H AD WG +G LG G +G+ P+ + L G V
Sbjct: 119 LRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGV 178
Query: 387 ISVACGYGHSLVIVD 401
+ACG+ H V++D
Sbjct: 179 QQIACGWAHCAVLMD 193
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-----R 100
+P + L+ +I VA G H A G Y+WG G LGHG+ + D
Sbjct: 51 APRLVGELLNTNIVGVALG--ERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTT 108
Query: 101 PTIVSELSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIE 152
P ++ LS+ K+ G HT+ T D L + W G G + E
Sbjct: 109 PKLIEYLSRVLRKKVTHVACGAYHTLCTTAD--KLTYIWGDGGHGVLGQGGDFGRTIEWT 166
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P + L V ACG L ++ + G G+LGHG + ++
Sbjct: 167 PQSIGALAGRGVQQIACGWAHCAVL--MDTGDLYTWGEGAGGRLGHGDEEDHK------- 217
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--------- 262
P +A+L G IV++ACG H A+ KG V+ G G GRLG
Sbjct: 218 -------EPHQVASLRGTRIVQIACGFAHMAALSDKGEVFVCG-TGCGRLGLDGEQGKSN 269
Query: 263 --HREQKDEWVPRRVDVFQRNNVL 284
H E ++ +PRRV+ + +L
Sbjct: 270 PEHTEVANQKIPRRVEPLRGLQIL 293
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 155/381 (40%), Gaps = 48/381 (12%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
+++ P L V +D+ +A G H V +G +TWG G+LGHG +P
Sbjct: 264 ADVLLPRPLESNVVLDVHHIACGVR--HASLVTRQGEVFTWGEESGGRLGHGVGKNVVQP 321
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----P 155
+V L I G H+ VT G +G H G LG GS + P P
Sbjct: 322 RLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGP 381
Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ L ++ ACG T ++S + G +G LGHG ++Y
Sbjct: 382 LEGL--QIAFVACGPWHTALITST--GQLFTFGDGTFGVLGHGDRQ---------NVSY- 427
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHR 264
PR + +L G + VACG HT AV S G ++TWG G RLGH
Sbjct: 428 ----PREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHG 483
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
+++ P V N + S+ T G M +G+L ++ D
Sbjct: 484 DKEARLKPTCVSALIDYNF---HKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGK 540
Query: 321 YPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + D ++G ++ + G H + + + +WG G LG+G + + P V
Sbjct: 541 VPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKT--PALV 598
Query: 379 DILEGMHVISVACGYGHSLVI 399
+ L+ HV +ACG +S I
Sbjct: 599 EALKDRHVKYIACGSNYSAAI 619
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 126/296 (42%), Gaps = 37/296 (12%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW--GRNERGQLG 91
GR + N+V P + L+ I FVA C H AV + G YTW G + G LG
Sbjct: 308 GRLGHGVGKNVVQPRLVEALISTTIDFVA--CGEFHSCAVTMAGELYTWGDGMHNAGLLG 365
Query: 92 HGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
HG + P I L +I G HT ++T G FG G LG G +N
Sbjct: 366 HGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNV 425
Query: 151 IEPSPVRCLVSEVT-ATACGADFTVWLSSV----EGASILNAGLPQYG-----QLGHGTD 200
P V L+ T A ACG T + V G SI + L +G +LGHG
Sbjct: 426 SYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK 485
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
EA+ +P ++AL K+ACG + TV + + G V+T G YG+
Sbjct: 486 --------------EARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQ 531
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN 314
LG D VP V + + E++ I+ G+ + + ++Y WGK N
Sbjct: 532 LG-SSLSDGKVPCLV-----GDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 42/315 (13%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
+ G H +VT G +G G+LG G +N ++P V L+S + ACG
Sbjct: 280 VHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGE 339
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGE 229
+ ++ G+ G LGHG++ + P+ IA L G
Sbjct: 340 FHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWI--------------PKRIAGPLEGL 385
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------VFQRNN 282
I VACG HT + S G ++T+G G +G LGH ++++ PR V+ +
Sbjct: 386 QIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACG 445
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP-----LMDLSGWNL 333
V AV+ + +S + G+L+ WG N GD KP L+D + +
Sbjct: 446 VWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKI 505
Query: 334 RCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVA 390
C S VG +S + G YG+LG K +P V D + G + +A
Sbjct: 506 ACGHSLT----VGLTTSGRVFTMGSTVYGQLGSSLSDGK---VPCLVGDKIAGESIEEIA 558
Query: 391 CGYGHSLVIVDRTNV 405
CG H V+ + V
Sbjct: 559 CGAYHVAVLTSKNEV 573
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + +ACG H V +G V+TWG GRLGH K+ PR V+
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALI 328
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
+ ++ G +S G+LY WG +N W+ + L G
Sbjct: 329 STTI----DFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEG 384
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + + ++G +G LG+G +++ + P++V+ L G+ I+V
Sbjct: 385 LQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHG--DRQNVSYPREVESLLGLRTIAV 442
Query: 390 ACGYGHSLVIVD 401
ACG H+ +V+
Sbjct: 443 ACGVWHTAAVVE 454
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y+WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P + K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
EY +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V VACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G ++G + GQLG I P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG G D + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD 51
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSH 121
C S H A+ G TWG+ G+LGHGD + RP +V L Y+ G+G +
Sbjct: 7 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 66
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
T+ +T+D N ++G +G+LG G P + L V CG+ F+V L+ +
Sbjct: 67 TLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT--K 124
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
++ G + +LGHG+ + RP+ +AAL G+ I+ +A G+ H
Sbjct: 125 SGAVYTWGKGDFHRLGHGSVDHVR--------------RPKKVAALQGKKIISIATGSLH 170
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
VA G VYTWG G+LG PR V Q +++
Sbjct: 171 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIV 214
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 67/302 (22%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGA 170
+ G +H+ +T G+ L +G ++G+LG G +++ P V L+ ACG+
Sbjct: 3 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
L + ++ + G YG+LG G + KL Y+ I +LAG
Sbjct: 63 GDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IESLAGLG 108
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++ I
Sbjct: 109 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS----I 164
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
+ GS++ + G++Y WG + D+
Sbjct: 165 ATGSLHCVACSDSGEVYTWG----DNDE-------------------------------- 188
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
G+LG G + P+ V L+G H++ V CG H+L + + + ERL
Sbjct: 189 ---------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQLSERLR 236
Query: 411 QL 412
L
Sbjct: 237 PL 238
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++ +ACG+ H+ A+ + G+V TWG G YGRLGH + +D+ P+ V+ + +
Sbjct: 2 SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIA 59
Query: 290 ISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
+G + C ++ W GKL G D P + L+G + ++ G+
Sbjct: 60 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 119
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG + LG+G PKKV L+G +IS+A G H + D
Sbjct: 120 VALTKSGAVYTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVACSDS 177
Query: 403 TNV 405
V
Sbjct: 178 GEV 180
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L+G +A G + + + ++WG + G+LG G P +
Sbjct: 42 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 101
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
L+ + K G +V +T+ G +G +LG GS+ + P V L ++
Sbjct: 102 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 161
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A G+ V S + + G GQLG GT A RPR +
Sbjct: 162 ISIATGSLHCVACS--DSGEVYTWGDNDEGQLGDGT--------------VTAIQRPRLV 205
Query: 224 AALAGETIVKVACGTNHTVAVDS 246
AAL G+ IVKV CG+ HT+A+ +
Sbjct: 206 AALQGKHIVKVTCGSAHTLALST 228
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 438 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 497
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 498 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 557
Query: 155 PVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 558 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 609
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 610 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 663
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 664 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 696
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 487 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 532
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 533 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 590
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 591 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 648
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 649 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 692
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 463
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 524 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 580
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 581 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 634
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 497 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 556
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 557 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 616
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 617 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 663
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 664 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 716
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 717 LPGLDTKHIVGIACGPAQSFA 737
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
L E R PR I +L+ I++VACG H++A+ V+ WG
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 106/251 (42%), Gaps = 30/251 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ G + WG N GQLG G R P VS L+ + AGR HT +T
Sbjct: 524 HTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTS-GVTVIAAGRFHTCALTSS 582
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N GQLG G+ N P V L S VTA A G T L+S + G
Sbjct: 583 GGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSS--GEVWCWG 640
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
YGQLG GT +T P A++ L + +A G HT A+ S G
Sbjct: 641 DNYYGQLGDGTTTNRST--------------PGAVSGLP-SGVTAIAAGWEHTCALTSSG 685
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
V+ WG YG+LG + P V P V I+AG ++ G G +
Sbjct: 686 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGL-------PSGVTAIAAGVYHTCALTGSGGV 738
Query: 307 YMWGKLKNNGD 317
WG NNGD
Sbjct: 739 MCWG---NNGD 746
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 108/264 (40%), Gaps = 26/264 (9%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ PL GV +AAG H A+ G WG N+ GQLG G R P VS L
Sbjct: 47 SSFSPLQGVTA--IAAG--GAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGL 102
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ AG HT +T G +G N GQLG+G P V L S VTA A
Sbjct: 103 PS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIA 161
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G D T L S G ++ G YGQLG GT T P A++ L
Sbjct: 162 AGGDHTCALMSSGG--VMCWGDNYYGQLGDGTTTNRRT--------------PVAVSGLP 205
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ +A G HT A+ G V+ WG+ YG+LG R +
Sbjct: 206 -SGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYS----RSTPAAVGGLPSGM 260
Query: 288 AVISAGSVNSSCTAGGGQLYMWGK 311
I+AG +++ G ++ WG+
Sbjct: 261 TAIAAGGLHTCALMSSGGVWCWGR 284
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 102/244 (41%), Gaps = 27/244 (11%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ G + WG N GQLG G R P VS L ++ AG HT +
Sbjct: 320 HTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSS 378
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N GQLG G+ P+ V L S VTA A G T L S G + G
Sbjct: 379 GGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALMSSGG--VWCWG 436
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
L GQLG G+D + +T P A++ LA + +A G HT A+ S G
Sbjct: 437 LNNSGQLGDGSDTDSST--------------PVAVSGLA-SGVETIAAGGWHTCALTSSG 481
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
V+ WG G+LG P V P V I+AG ++ G G +
Sbjct: 482 GVWCWGRNNSGQLGDGSTIYHITPVAVSGL-------PSGVTAIAAGDYHTCALTGSGGV 534
Query: 307 YMWG 310
+ WG
Sbjct: 535 WCWG 538
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 28/255 (10%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ +AAG + H A+ G WG N GQLG+G R P VS L + A
Sbjct: 106 VTAIAAG--NYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAA 162
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G HT + G + +G N +GQLG G+ N P V L S VTA A G T L+
Sbjct: 163 GGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGLHTCALT 222
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ G YGQLG GT ++ P A+ L + +A G
Sbjct: 223 GS--GEVWCWGYNYYGQLGDGTTT-------------YSRSTPAAVGGLP-SGMTAIAAG 266
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
HT A+ S G V+ WG G+LG D P V P V I+AG
Sbjct: 267 GLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL-------PSGVTAIAAGDY 319
Query: 296 NSSCTAGGGQLYMWG 310
++ G G+++ WG
Sbjct: 320 HTCALTGSGEVWCWG 334
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 146/370 (39%), Gaps = 39/370 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H A+ G + WGRN GQLG G R P VS L + AG HT +
Sbjct: 371 HTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS-GVTAIAAGGLHTCALMSS 429
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G +G N GQLG GS + P V L S V A G T L+S G + G
Sbjct: 430 GGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTSSGG--VWCWG 487
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
GQLG G+ + T P A++ L + +A G HT A+ G
Sbjct: 488 RNNSGQLGDGSTIYHIT--------------PVAVSGLP-SGVTAIAAGDYHTCALTGSG 532
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
V+ WG+ G+LG D P V VI+AG ++ G ++
Sbjct: 533 GVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG-----VTVIAAGRFHTCALTSSGGVWC 587
Query: 309 WGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
WG + GD + P + L + + +G H S + WG YG+
Sbjct: 588 WGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQ 646
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASS 421
LG G +S+ P V L V ++A G+ H+ + T+ GE D Y G+
Sbjct: 647 LGDGTTTNRST--PGAVSGLP-SGVTAIAAGWEHTCAL---TSSGEVWCWGDNYYGQLG- 699
Query: 422 QDNEEIDRNS 431
D +R++
Sbjct: 700 -DGTTTNRST 708
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 94/232 (40%), Gaps = 20/232 (8%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ +AAG H A+ G + WG N GQLG G R P VS L + A
Sbjct: 566 VTVIAAG--RFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAA 622
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G HT +T G +G N +GQLG G+ N P V L S VTA A G + T L+
Sbjct: 623 GGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGWEHTCALT 682
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S + G YGQLG GT +T P A++ L + +A G
Sbjct: 683 SS--GEVWCWGDNYYGQLGDGTTTNRST--------------PGAVSGLP-SGVTAIAAG 725
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
HT A+ G V WG G G+LG P V V P +
Sbjct: 726 VYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMII 777
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 143/364 (39%), Gaps = 54/364 (14%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ +AAG + H A+ G + WG N GQLG G P VS L+ ++ A
Sbjct: 413 VTAIAAGGL--HTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAA 469
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G HT +T G +G N GQLG GS I P V L S VTA A G T L+
Sbjct: 470 GGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALT 529
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G + G GQLG GT + +T P A++ L + +A G
Sbjct: 530 GSGG--VWCWGYNLSGQLGDGTTTDRST--------------PVAVSGLT-SGVTVIAAG 572
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
HT A+ S G V+ WG G+LG + P V P V I+AG
Sbjct: 573 RFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGL-------PSGVTAIAAGGW 625
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN------LRCMDSGNMHHFVGADS 349
++ G+++ WG Y L D + N + + SG G +
Sbjct: 626 HTCALTSSGEVWCWGD--------NYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGWEH 677
Query: 350 SCI--------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+C WG YG+LG G +S+ P V L V ++A G H+ +
Sbjct: 678 TCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLP-SGVTAIAAGVYHTCALTG 734
Query: 402 RTNV 405
V
Sbjct: 735 SGGV 738
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLL 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G++ E PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 120 GSE--------------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 609
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 126/301 (41%), Gaps = 60/301 (19%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------ 94
+G ++P RL L G I VA H AV +G YTWG G+LGH +
Sbjct: 138 EGLQLTPNRLDSLHGTPI--VALAAAKFHSAAVAKDGSLYTWGFGRGGRLGHPEFHIHSG 195
Query: 95 KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P +V+ + + G+ HTV VT G +G N+ G+LG ++ ++ P
Sbjct: 196 ESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGELFTWGSNRDGRLGYTAVDSQPTPR 255
Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
V + V A A TV L+ EG ++ + G GQLG+GT + +
Sbjct: 256 RVTSMRQRVMAVAAANRHTVVLA--EGGTVYSWGSNLQGQLGYGTSDSASNAV------- 306
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
PR + A+ G+TI VA HTV + +G VYTWG HR P+R
Sbjct: 307 -----PRIVEAMVGKTITAVAAAKRHTVVLTVEGDVYTWG--------HRVVT----PKR 349
Query: 275 VD-----------------------VFQR--NNVLPPEAV-ISAGSVNSSCTAGGGQLYM 308
V VF R + V P AV + AG+ +S+C G +
Sbjct: 350 VQLAGARDVARAANASGASAGGWEVVFHRGQSQVARPHAVAVCAGAAHSACLDQSGAVLA 409
Query: 309 W 309
W
Sbjct: 410 W 410
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 184 ILNAGLPQYGQLGHGTDNEYNT--KDSSVKLAYEA---QPRPRAIAALAGETIVKVACGT 238
+L+A L Y L GT +E + ++ +L EA Q P + +L G IV +A
Sbjct: 105 LLSASLKAY--LLSGTASEVYSWGNGANYQLGTEAEGLQLTPNRLDSLHGTPIVALAAAK 162
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEWVPRRVDVFQRNNVLPPEAVISA 292
H+ AV G +YTWGFG GRLGH E + +PR V + R V A ++
Sbjct: 163 FHSAAVAKDGSLYTWGFGRGGRLGHPEFHIHSGESAVILPRLVALPGRRTV----AAVAT 218
Query: 293 GSVNSSCTAGGGQLYMWGKLKNNG------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
G ++ G+L+ WG ++ D P+ + + + + + N H V
Sbjct: 219 GKHHTVAVTRAGELFTWGSNRDGRLGYTAVDSQPTPRRVTSMRQ-RVMAVAAANRHTVVL 277
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
A+ + SWG G+LGYG S+A+P+ V+ + G + +VA H++V+
Sbjct: 278 AEGGTVYSWGSNLQGQLGYGTSDSASNAVPRIVEAMVGKTITAVAAAKRHTVVL 331
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 154/389 (39%), Gaps = 45/389 (11%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D V R G D + P L + +D+ V G H V G +TWG G+L
Sbjct: 54 DTVIRSTGKAD--FLLPKPLESKLVLDVYHVDCGVK--HAALVTKNGEVFTWGEESGGRL 109
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
GHG + P +V L+ + G HT VT G +G H G LG+G+
Sbjct: 110 GHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDV 169
Query: 149 NEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
+ P + + +V +CG T ++S + G +G LGHG ++
Sbjct: 170 SHWIPKRISGALEGHQVAYVSCGTWHTALVTS--RGQLFTFGDGTFGVLGHGNRESFSC- 226
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
PR + +L+G + VACG HT AV S G ++TWG
Sbjct: 227 -------------PREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGD 273
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGK 311
G RLGH +++ P V + + S+ T G L M +G+
Sbjct: 274 GDKHRLGHGDKEPRLKPTCVASLIDYDFC---RIACGHSLTVGLTTSGQILSMGNTVYGQ 330
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQK 370
L N D P + D+ G ++ + G+ H V + S +WG G LG+G +
Sbjct: 331 LGNPRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDR 390
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
+P V+ L V +ACG + I
Sbjct: 391 K--IPTLVEALRDRGVRHIACGSNFTSAI 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 135/308 (43%), Gaps = 41/308 (13%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
G H +VT++G +G G+LG GS + + P V L + V ACG T +
Sbjct: 85 GVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAV 144
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVA 235
++ G G LG+GTD + P+ I+ AL G + V+
Sbjct: 145 TTAGELYTWGDGTHNIGLLGNGTDVSHWI--------------PKRISGALEGHQVAYVS 190
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-------VFQRNNVLPPEA 288
CGT HT V S+G ++T+G G +G LGH ++ PR V+ + V A
Sbjct: 191 CGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAA 250
Query: 289 VISAGSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKP-----LMDLSGWNLRCMDSG 339
V+ SS + G+L+ WG +GD KP L+D + C S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSL 310
Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
VG +S +S G+ YG+LG P + +P V+ + G HV+ VACG H
Sbjct: 311 T----VGLTTSGQILSMGNTVYGQLG-NP--RSDGKLPCLVEDIMGEHVVQVACGSYHVA 363
Query: 398 VIVDRTNV 405
V+ +++ V
Sbjct: 364 VLTNKSEV 371
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 14 TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
G G++L G+T + +G + DG L P + ++G + V C S H +
Sbjct: 312 VGLTTSGQILSMGNTVYGQLGNPRS--DGKL--PCLVEDIMGEHV--VQVACGSYHVAVL 365
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
+ +TWG+ G+LGHGD R PT+V L ++ G + T + +
Sbjct: 366 TNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAICQ 419
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G+ + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RYVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
L E R PR I +L+ I++VACG H++A+ V+ WG
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 96.7 bits (239), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKK 114
+ F++ G + H + +G YTWG G+LGHG P +V ++
Sbjct: 163 VVFISTGAI--HTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS 220
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
G HTV +T GN +FG N QLG G+I + +P + + +
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ S +++ N + SS K+ + I+K+
Sbjct: 281 IIMSNSTSTLFNK----------------QQQQSSNKI----------------DRIIKL 308
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
+C TN + A+ GY+YTWG G GRLGH + + P++V + ++ +S G
Sbjct: 309 SCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD----MSLGG 364
Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
+S G+++ WG+ +N M PK + ++ + +G H +
Sbjct: 365 GHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAID 424
Query: 347 ADSSCISWGHAQYGELG 363
+ S +WG YG LG
Sbjct: 425 TNGSMFAWGRGDYGVLG 441
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R + C + A+ G YTWGR + G+LGHGD + + P V L + I G
Sbjct: 304 RIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLG 363
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSE-VTATACGADFTVWL 176
H++ +T+ G ++G ++GQLG G+ + ++ P ++ ++ + + G ++ +
Sbjct: 364 GGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAI 423
Query: 177 SSVEGASILNAGLPQYGQLGHGT--DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ S+ G YG LG + D+ + + + + AGE + V
Sbjct: 424 DT--NGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINV 481
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
+ G H VA G +Y+WG G RLG ++++ +P++++ R+N P A S G
Sbjct: 482 SSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLN--DRSNNSKP-AFFSCGE 538
Query: 295 V 295
+
Sbjct: 539 I 539
Score = 55.5 bits (132), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 50/245 (20%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
G+LGHGT Y+ + + +E +P R +V VA G HTVA+ G VY+
Sbjct: 191 GKLGHGTLESYS--EPRLVEFFETKPSLR---------VVSVANGGKHTVALTVCGNVYS 239
Query: 253 WGFGGYGRLGHREQKDEW--VPRRVD------------------------VF-----QRN 281
+G +LG + P+ V +F Q +
Sbjct: 240 FGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSS 299
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMY--PKPLMDLSGWNLRC 335
N + +S + S+ + G LY WG+ N +GD M PK +M L G +
Sbjct: 300 NKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD 359
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
M G H + SWG + G+LG+G + + PK++ + + ++ G
Sbjct: 360 MSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMT-PKQIQAFQNKTIKVISAGGY 418
Query: 395 HSLVI 399
HS+ I
Sbjct: 419 HSIAI 423
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 84/220 (38%), Gaps = 47/220 (21%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
E +V ++ G HT + KG++YTWG G G+LGH + PR V+ F+ L +
Sbjct: 161 EKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS 220
Query: 289 VISAGS---------------VNSSCTAGGG----------QLYMWGK------------ 311
V + G N SC G G QL +
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280
Query: 312 -LKNNGDDWMYPKPLMDLSG-----WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
+ +N ++ K S L C S N + +WG G LG+G
Sbjct: 281 IIMSNSTSTLFNKQQQQSSNKIDRIIKLSC--STNRSAAISKLGYLYTWGRGDNGRLGHG 338
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+S+ PK+V L G ++ ++ G GHS+ + R V
Sbjct: 339 DSLMQST--PKQVMSLHGHTIVDMSLGGGHSMALTKRGEV 376
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 135/313 (43%), Gaps = 43/313 (13%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P RL L G I ++ G H + + +G Y+WG N QLG+G+ IQ P +
Sbjct: 122 IMPRRLDVLCGKKIVDLSYG-SGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 180
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
EL K+ + G H++ +T DG ++G+N GQ+GSG+ N+ P V +
Sbjct: 181 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 240
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ A T ++ + + G GQLG G NT + Q P +
Sbjct: 241 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 286
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
I++V G HT+A+ +G +Y WG +G+LG + ++ VP +V +R
Sbjct: 287 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 343
Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
V + S N S+ + Q+YMWG + +C+ S ++
Sbjct: 344 --MVEVTACHSTNISAAKSQSEQVYMWGLCRG-------------------QCLLSPHLT 382
Query: 343 HFVGADS--SCIS 353
HF D +C S
Sbjct: 383 HFTCTDDVFACFS 395
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
G + + T++ FG N LG+G ++ I P + L ++ + G+ +
Sbjct: 87 GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 146
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L + +G + + G Y QLG+G + T V++ E L + +++V
Sbjct: 147 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 192
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
ACG++H++A+ S G V++WG+ G++G ++ VPR+V ++ V+ ISAG
Sbjct: 193 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVV---VSISAGQ 249
Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S G +Y WG L N G+ M P L+ + + G H +
Sbjct: 250 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 308
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
D + +WG +G+LG G + + +P KV E M
Sbjct: 309 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 344
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS- 294
C N + V+ +G LG + + +PRR+DV ++ +S GS
Sbjct: 88 CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVD----LSYGSG 143
Query: 295 VNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPL---MDLSGWNLRCMDSGNMHHF-VG 346
+ G++Y WG NG+ P+ M+L + + G+ H +
Sbjct: 144 PHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALT 203
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVIVDRTNV 405
+D SWG+ G++G G +S +P+KV L+ V+S++ G S+ + D +V
Sbjct: 204 SDGEVFSWGYNNCGQVGSGTTANQS--VPRKVASSLQSKVVVSISAGQTSSMALTDNGHV 261
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 467 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 526
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586
Query: 155 PVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 638
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 639 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 692
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 693 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 725
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 516 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 561
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 562 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 619
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 677
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 678 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 492
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 553 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 609
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 663
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 692
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 693 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 745
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 746 LPGLDTKHIVGIACGPAQSFA 766
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H V G +T G N GH D + RP +V L K+ AG + TV +T
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G+ G N HGQLG G ++ P + L S V A G + LS E ++ +
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL-SSVVQIAAGPSYI--LSVTENGTVYSF 290
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G LGHG ++ E QPR G IV+V+ G H VA+DS
Sbjct: 291 GSGANFCLGHGEQHD------------ELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSN 338
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-------VISAGSVNSSCT 300
GYVYTWG G G LGH ++ ++ P + + V+ A ++ +GSV +
Sbjct: 339 GYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGS 398
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G G L + D + P+ L L ++ + +G H V
Sbjct: 399 MGFGSLGFLD--RRVSDKVLKPRILDTLRTHHVSQISTGLYHTVV 441
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G+ I V+AG H VA+D G YTWG+ G LGHGD+I++ P +++ L + +
Sbjct: 319 GIHIVRVSAG--DEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQ 376
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR---NEIEPSPVRCL-VSEVTATACGA 170
A + T V+ + G+ FG G LG R ++P + L V+ + G
Sbjct: 377 VCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGL 436
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGT 199
TV ++S I G + QLGH T
Sbjct: 437 YHTVVITS--RGQIFGFGDNERAQLGHDT 463
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTIVSELSKYKIKKAGAGRSHTVVVTE 127
V VD G Y +G G LG D+ D+ P I+ L + + + G HTVV+T
Sbjct: 386 VLVD-SGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITS 444
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
G FG N+ QLG ++R+ +EP+ +
Sbjct: 445 RGQIFGFGDNERAQLGHDTLRSCLEPTEI 473
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G+ + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLL 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G+ + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ + P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDEND--------------RYVPNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
L E R PR I +L+ I++VACG H++A+ V+ WG
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,376,491,506
Number of Sequences: 23463169
Number of extensions: 440264200
Number of successful extensions: 3456969
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7070
Number of HSP's successfully gapped in prelim test: 10793
Number of HSP's that attempted gapping in prelim test: 3113102
Number of HSP's gapped (non-prelim): 205027
length of query: 539
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 391
effective length of database: 8,886,646,355
effective search space: 3474678724805
effective search space used: 3474678724805
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)