BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009248
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 223
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 224 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 280
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 281 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 338
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 339 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 394
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 395 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 454
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E++ +L
Sbjct: 455 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 514
Query: 413 DVYD 416
Y+
Sbjct: 515 PEYN 518
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 236/423 (55%), Gaps = 36/423 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T+ G+
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 221
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGC 278
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYT 392
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-DRTNV-GERLDQL 412
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI D + E+L +L
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRL 512
Query: 413 DVY 415
Y
Sbjct: 513 PEY 515
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 36/443 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 76 VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R VA+G + H + + VEG+ ++WGRN++GQLGHGD + D P ++ L
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE+G+ AFG NK GQLG G+ + + PSP + L + +T ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D +Y + + ++ Y+ + R IA +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +ACG NH++ +DS+ V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370
Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P A I AG+ S + G L+ WG + D MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG KSS ++V L+G++ V G H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSH 486
Query: 396 SLVIV-DRTNVG-ERLDQLDVYD 416
+LV+ D T E+L +L Y+
Sbjct: 487 TLVVARDETEQDKEKLKKLPEYN 509
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 233/436 (53%), Gaps = 31/436 (7%)
Query: 5 EAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGV 56
+ ++ ++ E K KG +LL G+T WD +GR++ L NL P R L V
Sbjct: 63 DVKEKIKLEVPKVKG-QLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDV 121
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+ V +G + H + + EG+ ++WGRN++GQLGHGD + + P ++ L + I A
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVW 175
GR+HT+ +TE+G FG NK GQLG G+ + + P+ ++ + ACGA+F++
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMI 241
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALA 227
+ ++ + G P+YGQLGH +D ++ + ++ E PR AI L
Sbjct: 242 VDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLP 299
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+V VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 300 VPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FP 355
Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I G S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 356 GRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 415
Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV-- 400
V AD S ISWG + +GELGYG KSS ++V L+G++ V GY HSLVI
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
Query: 401 DRTNVGERLDQLDVYD 416
D E+L +L Y+
Sbjct: 476 DTEQEKEKLKKLPEYN 491
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4185 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4244
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4290
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4350
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4351 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4375
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4376 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4418
Query: 406 GERLDQL 412
ERL L
Sbjct: 4419 SERLRPL 4425
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3108
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3109 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 3168
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3169 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3221
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3222 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3275 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG 355
+D+ ++ S I+WG
Sbjct: 3331 G------LDAVFVNRVACGSSHSIAWG 3351
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 3017 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG DN Q +P+ +
Sbjct: 3129 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------TTQLKPKLVT 3172
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3173 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3233 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3288
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3289 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3346
Query: 396 SL 397
S+
Sbjct: 3347 SI 3348
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 2983 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3040
Query: 132 LAFGWNKHGQLGSGSIRNEIEPS--PV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P PV R V + A G + L +++G + + G
Sbjct: 3041 YACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3098
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 3099 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3144
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 3200
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3201 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3260
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3261 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4052 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4111
Query: 140 GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ + L + A G + L++ EG + G + G+LG
Sbjct: 4112 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4169
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG G
Sbjct: 4170 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4273
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4274 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4333
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4334 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4367
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 678
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 739 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 782
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+VA+ S+G +YTWG LGH R + VPR V Q ++ ++
Sbjct: 783 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 836
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 837 HCLALSSSGEVFGWGR 852
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A + + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 602 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P ++
Sbjct: 660 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 715
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH--HFVGADSS--CISWGHAQY 359
G+LY W K + P P+ +++ ++ +G+ HF+ DS+ SWG +
Sbjct: 591 GKLYTWRLAKPEAE----PLPMEEVAH-DVFISIAGHCEGRHFLAIDSNHNAYSWGTGED 645
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG+G + A+P K+ LE V SV CG +S I
Sbjct: 646 HRLGHG--DTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVS--YSGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 76 ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 176
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3027 GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3087 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3146
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3195
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3196 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3252
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3253 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y G G+L
Sbjct: 2970 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRL 3024
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3084
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3137
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3138 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3189 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3302
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3303 VQGLEGQKITRVACGSSHSV 3322
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4262
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3090 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3208 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3266 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 618
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 672
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 18/180 (10%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001
Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
A G+LY G + P L + ++ ++SG H + ++
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G G + P ++ L ++ VA H A+ V+G+ ++WG + G+LGH ++
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D+P ++ L +I+ G SH+ +T G +G ++G+LG G +++P V+
Sbjct: 3088 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3147
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI----------- 3196
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH P+ V+
Sbjct: 3197 ---PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ ++ ++ G+++ GQ+Y WG
Sbjct: 3254 GLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 31 DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
D +G KG+ + P+ L +++ VA G S AV VEG+ Y+ G G+L
Sbjct: 2971 DQLGGLKGS---KIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRL 3025
Query: 91 GHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
G G P ++ LS Y +KK +G H +T DG ++G G+LG S
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 3085
Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
N +P + L ++ + ACG+ + L+S + GL +YG+LGHG DN
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DNT---- 3138
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHR 264
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG
Sbjct: 3139 ---------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWM 320
+ +P+ ++ V I G+ S G ++ WGK +G D
Sbjct: 3190 GSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 321 YPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKK 377
KP + L G + + G +H DS + +WG +G+ G G + P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTL 3303
Query: 378 VDILEGMHVISVACGYGHSL 397
V LEG + VACG HS+
Sbjct: 3304 VQGLEGQKITRVACGSSHSV 3323
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 30/331 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
P++V L+G VI++A G H +
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4264
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + + G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G ++G + G+LG G+ P + L EV A G + +++ +
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ + GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L IR +A G S H A+ G YTWG E G+LGHGD + +P +V
Sbjct: 3091 PRLIEALKTKRIRDIACG--SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148
Query: 107 LSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L +++ + G + T+ +T++G ++G G+LG G P + L + V
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3209 CQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 205 ------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHTVA 243
DS A+ +P + L G+ I +VACG++H+VA
Sbjct: 3267 ALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 61/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMD----SGNMHHF 344
S+ G+LY WG+ N G +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGR-GNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTL 619
Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G ++ CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 18/179 (10%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G I K G T + +K V+ WG +LG + VP + NV+
Sbjct: 2942 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2997
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
++ GS + G++Y G+ N + P+ + LS + ++ + S
Sbjct: 2998 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3055
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003
Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
A G+LY G + P L + ++ ++SG H + ++
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
+N V+ I+ G + G++Y+WG L N+G+ P P +
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
L G ++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V + ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ + GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKSQGGHVYMWGQCR 338
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMS---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG + ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++
Sbjct: 226 RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI------ 279
Query: 282 NVLPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
++ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 280 -MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA--DGELFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV V I G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCV----NQIVCGYAHTLALTDEGLLYAWG 258
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L++ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
PT + + I+ A +HT
Sbjct: 276 PTQIMVEKERVIEIAACHSTHT 297
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I+ ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
+ L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ ++ + G GQLG G + Q P
Sbjct: 182 RVVGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPV 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
P + + ++ A +HT
Sbjct: 276 PAHIMVEKERVVEIAACHSAHT 297
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG +L + + + P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG+G + PK ++ L+GM + V G SL +
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G + H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVD 401
SWG YG+LG+G + PK + L+G V+ V+ GY HS + +
Sbjct: 480 FSWGDGDYGKLGHG--NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 149/371 (40%), Gaps = 73/371 (19%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGN 130
AV + WG N GQLG G K +S+ K IK+ G H+ VVT++G+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
G NK GQLG G + +P + L+ + ACG DFT+ L+ E +L+ G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILT--ENGQVLSCGS 127
Query: 190 PQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVA 243
+GQLG HG PR P+AI L E +V +A G H +A
Sbjct: 128 NSFGQLGVPHG-------------------PRRCVIPQAIELLR-EKVVSIAAGLRHALA 167
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSC 299
+ G V+ WG G G R + +P + + + V E + AGS +S+
Sbjct: 168 ATASGTVFQWGT-GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSAS 226
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM-------HHFVGA 347
G+LY+W G+L + + P+ + RC + + H V
Sbjct: 227 LTDAGELYVWGSNKHGQLASQAAFLLLPQRI------EARCFQNEKIAAVWSGWTHLVAQ 280
Query: 348 DSS--CISWGHAQYGELGYG----------------PYGQKSSAMPKKVDILEGMHVISV 389
+ +WG A YG+LG P P + L G IS
Sbjct: 281 TVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEIS- 339
Query: 390 ACGYGHSLVIV 400
CG H+L ++
Sbjct: 340 -CGSEHNLAVI 349
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++L CGS + +G G V P + L+ + +AAG H +A G
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPR--RCVIPQAIE-LLREKVVSIAAGLR--HALAATASGTV 174
Query: 80 YTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ WG +L G + P+ V+ L + AG H+ +T+ G
Sbjct: 175 FQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELY 234
Query: 133 AFGWNKHGQLGSGS----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+G NKHGQL S + + IE RC +E A A + +T ++ + G
Sbjct: 235 VWGSNKHGQLASQAAFLLLPQRIE---ARCFQNEKIA-AVWSGWTHLVAQTVTGKVFTWG 290
Query: 189 LPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
YGQLG + E +D S+ + + P + L G T +++CG+ H +AV
Sbjct: 291 RADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGAT--EISCGSEHNLAV 348
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
G ++WG+ +G G + D W P+ V
Sbjct: 349 IG-GVCHSWGWNEHGMCGDGTEADVWAPKPV 378
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S H +AV + G C++WG NE G G G + P V L + G G H++
Sbjct: 340 CGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLA 398
Query: 125 VTE 127
+ +
Sbjct: 399 LCQ 401
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG G + P + LS +I + G
Sbjct: 87 VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 152/351 (43%), Gaps = 34/351 (9%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P R V +R V GC H V V +G YT G N+ GQLGH
Sbjct: 15 GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS- 71
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 72 -RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G D
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
+ + ++ I G +++ G ++ +G+L +N + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 44/335 (13%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
GQLG R +P V L ++ + A ACG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLGLQ 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G++ E PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 120 GSE--------------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
YG+LG ++ + + + + P ++AG +S G ++ WG+
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYG 365
K N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V VACG H+ V
Sbjct: 278 STSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P++ D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
FV D + + G G+LG+ +KS P++V L+ ++++VACG H+L + D+
Sbjct: 48 FVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKG 103
Query: 404 NVGER-LDQLDVYDGKASSQDNEEIDR 429
V LD DG+ Q +EE R
Sbjct: 104 QVYAWGLDS----DGQLGLQGSEECIR 126
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG G + P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG G + + Q P+ I +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIEC-------------QKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLQ 119
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G++ E PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 120 GSE--------------ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
YG+LG E + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 166 YGQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V +ACG H+ V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
FV D + + G G+LG+ +KS P++V L+ ++++V+CG H+L + D+
Sbjct: 48 FVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKG 103
Query: 404 NVGER-LDQLDVYDGKASSQDNEEIDR 429
V LD DG+ Q +EE R
Sbjct: 104 QVYAWGLDS----DGQLGLQGSEECIR 126
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 35/261 (13%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
VA C H +A++ +G+ Y WG + GQLG + R P + LS +I + G
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
H++ +++ +G NK+GQLG G+ + + P ++ L + + A GA F +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
LS +I G ++GQLG +N+ P + +L + IV +
Sbjct: 207 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 248
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA------- 288
CG +HT A+ +G V+T+G GGYG+LGH E PR+ VF+ + E
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK--VFELMGSIVTEIACGRQHT 306
Query: 289 ---VISAGSVNSSCTAGGGQL 306
V S+G + S G GQL
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQL 327
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
GC H V V +G YT G N+ GQLGH R +P V L I G +HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 123 VVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVE 180
+ + + G A+G + GQLG GS P ++ L ++ ACG ++ LS +
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ + G +YGQLG GTD + Q P+ + +L G ++VA G H
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDC-------------KKQTSPQLLKSLLGIPFMQVAAGGAH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+ + G ++ WG +G+LG ++ D +VP + + ++ I G +++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257
Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
G ++ +G+L +N + P+ + +L G + + G H FV +
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIY 317
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
S+G G+LG G + S K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L+ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
ACG T G I + GL GQLG G+
Sbjct: 298 EIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A +G+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
FV D + + G G+LG+ +KS P++V L+ ++++V+CG H+L + D+
Sbjct: 48 FVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKG 103
Query: 404 NV 405
V
Sbjct: 104 QV 105
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG G ++ +PS + L ++ V ACG + L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 177 SSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A L G + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CG HT+A V G V+++G G G+LG+ +D+ +P V V + L E+ S
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360
Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
+ AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L GV + ++AG H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG G +D P+++ L K++ G SH+ ++T+DG FG
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325
Query: 193 GQLGHG 198
GQLG+G
Sbjct: 326 GQLGNG 331
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
KI G H ++++ DG + L SI E ++ CG
Sbjct: 98 KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++ LS +G + G +GQLG G + + P+ + LAG
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGRK-------------FPSTTTPQIVEHLAGVP 192
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ +++ G H++A+ G +Y+WG G+ LGH E KD+ P ++ V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKV----E 246
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ G +S+ G L+ +G K N+ + + P + +L G+ + + G H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306
Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+V S+G + G+LG G G + MP V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G + GQLG G E++ P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLGHT--------------ESKDDPSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
L + + VACG +H+ + G ++T+G G +G+LGH ++E P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSG 330
P A ISAG +S + G +Y WGK + + DD P + L
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDN 242
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + D ++G ++G+LG+ ++ P V L G V +
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQI 300
Query: 390 ACGYGHSLVIV 400
ACG H+L V
Sbjct: 301 ACGRWHTLAYV 311
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P RPL ++R + H + +D G+ ++WG GQLGHG P ++
Sbjct: 148 PPFYRPL-APELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA 206
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + + AG H+V V+E G+ +GWN+ GQL P R L +
Sbjct: 207 LQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL----------PTRNLAEDGETV 256
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A A+ LN Q + G +D + QP P +
Sbjct: 257 A------------REATGLNEDGSQVKRTG-------RVEDGAPAPFIAVQPFPALLDLP 297
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G VKV+CG+ HT V G +YTWG+G YG+LGH + PRRV+ F
Sbjct: 298 LGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYF 349
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
PRP LA E + + G H + +D+ G V++WG G +G+LGH + E PR ++
Sbjct: 146 PRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE 205
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Q + A ++AG +S C + G +Y+WG
Sbjct: 206 ALQGLTM----AEVAAGGWHSVCVSETGDIYIWG 235
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAG 118
V C S H V G YTWG + GQLGH D D P V + ++K G
Sbjct: 303 VKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCG 362
Query: 119 RSHT-VVVTEDGNS 131
+T V E G S
Sbjct: 363 PWNTYVYAVEKGKS 376
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTL--EAELEPRLLEALQGLTMAEVAAG 218
Query: 393 YGHSLVIVDRTNV 405
HS+ + + ++
Sbjct: 219 GWHSVCVSETGDI 231
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 147/352 (41%), Gaps = 61/352 (17%)
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G K P +++ K + +++ G H+ VVT+ G+ G NK GQLG
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 144 SGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG--HGTD 200
G + +P + L + ACG DFT+ L+ E +L+ G +GQLG HG
Sbjct: 83 LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLT--ENGQVLSCGSNSFGQLGVPHG-- 138
Query: 201 NEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
PR P+AI L E +V +A G H VA + G V+ WG
Sbjct: 139 -----------------PRRCVVPQAI-ELHKEKVVCIAAGLRHAVAATASGIVFQWG-T 179
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMW--- 309
G G R + +P + + V E + AGS +S+ G++Y+W
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 310 --GKLKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGADS-SCISWGHAQYGELG- 363
G+L N P+ + N + + SG H ++ +WG A YG+LG
Sbjct: 240 KHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGR 299
Query: 364 ---------------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P + ++MP L G V+CG H+L I+
Sbjct: 300 KLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII 349
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 121/303 (39%), Gaps = 48/303 (15%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVE 76
G++L CGS + +G G P R +++ C++ H VA
Sbjct: 120 GQVLSCGSNSFGQLGVPHG--------PRRCVVPQAIELHKEKVVCIAAGLRHAVAATAS 171
Query: 77 GRCYTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
G + WG +L G + P+ V+ L K AG H+ +T+ G
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 231
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPV------RCLVSEVTATACGADFTVWLSSVEGAS 183
+G NKHGQL NE PV C +E TA + +T ++ E
Sbjct: 232 EVYVWGSNKHGQLA-----NEAAFLPVPQKIEAHCFQNE-KVTAIWSGWTHLVAQTETGK 285
Query: 184 ILNAGLPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YGQLG + + +DS + + P + L G T +V+CG+
Sbjct: 286 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGAT--EVSCGSE 343
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H +A+ G Y+WG+ +G G + + W P+ P +A++S+ + C
Sbjct: 344 HNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK-----------PVQALLSSSGLLVGC 391
Query: 300 TAG 302
AG
Sbjct: 392 GAG 394
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG------HGDKIQRD-------RPTIVSELSKYKIKKA 115
H VA G+ +TWGR + GQLG G K+++ RP S + + A
Sbjct: 276 HLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA 335
Query: 116 ---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGAD 171
G H + + G ++GWN+HG G G+ N P PV+ L+S CGA
Sbjct: 336 TEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 394
Query: 172 FTVWLSSVEGASIL 185
++ L + L
Sbjct: 395 HSLALCQLPAHPAL 408
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S H +A+ + G CY+WG NE G G G + P V L G G H++
Sbjct: 340 CGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLA 398
Query: 125 VTE 127
+ +
Sbjct: 399 LCQ 401
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L + + AG H+V V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +GWN+ GQL P R L + A A+ LN
Sbjct: 229 GDIYIWGWNESGQLA----------LPTRNLAEDGETVA------------REATELNED 266
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
Q + G +D + QP P + G VK +CG+ HT V G
Sbjct: 267 GSQVKRTG-------GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+YTWG+G YG+LGH + PRRV+ F
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ G H + +D+ G V++WG G +G+LGH + E PR ++ Q + A ++A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM----AEVAA 217
Query: 293 GSVNSSCTAGGGQLYMWG 310
G +S C + G +Y+WG
Sbjct: 218 GGWHSVCVSETGDIYIWG 235
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 63/173 (36%), Gaps = 44/173 (25%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG------ 91
G L+ L P L L G+ + VAAG H V V G Y WG NE GQL
Sbjct: 193 GTLEAEL-EPRLLEALQGLVMAEVAAG--GWHSVCVSETGDIYIWGWNESGQLALPTRNL 249
Query: 92 --HGDKIQRDRPTIVSELSKYK------------------------------IKKAGAGR 119
G+ + R+ + + S+ K KA G
Sbjct: 250 AEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGS 309
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACG 169
HT VVT G +GW K+GQLG + P V V +V A CG
Sbjct: 310 RHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGV-DIRF----VAAGCVSCHCVAVDVEGRCYTWGRNER 87
V R GA DG ++P + D+ V A C S H V G YTWG +
Sbjct: 270 VKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKY 329
Query: 88 GQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAGRSHT-VVVTEDGNS 131
GQLGH D DRP V + ++K G +T V E G S
Sbjct: 330 GQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTL--EAELEPRLLEALQGLVMAEVAAG 218
Query: 393 YGHSLVIVDRTNV 405
HS+ + + ++
Sbjct: 219 GWHSVCVSETGDI 231
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVV 125
SC V + WG N GQLG G K P +S+ + IK G H+ VV
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPS---PVR-CLVSEVTATACGADFTVWLSSVEG 181
T+ G+ G NK GQLG G + + P+R C + +V ACG DFT+ L+ E
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQV---ACGWDFTIMLT--EK 119
Query: 182 ASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVA 235
+L+ G +GQLG HG PR P+AI L E +V VA
Sbjct: 120 GQVLSCGSNAFGQLGVPHG-------------------PRKCVVPQAIECLR-EKVVCVA 159
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVIS- 291
G H +A + G V+ WG G G R + +P + + + V E AV +
Sbjct: 160 AGLRHALATTATGSVFQWGT-GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN---GDDWMYPKPLMDLSGW----NLRCMDSGNMHHF 344
AGS +S+ G+LY+WG+ K+ P P + + + + SG H
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 345 VGADS-SCISWGHAQYGELG--------YGPYGQKSS--------AMPKKVDILEGMHVI 387
++ +WG A YG+LG P Q SS ++P + L G I
Sbjct: 279 AKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEI 338
Query: 388 SVACGYGHSLVIV 400
S CG H+L ++
Sbjct: 339 S--CGSEHNLAVI 349
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 142/373 (38%), Gaps = 49/373 (13%)
Query: 60 FVAAGCVSC------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F AGC+ H V G + G N+ GQLG G + R TI L I+
Sbjct: 45 FCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIR 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G T+++TE G L+ G N GQLG R + P + CL +V A G
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRH 164
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ A+ + Q+G G + ++ L A+ P + L T V
Sbjct: 165 AL-------ATTATGSVFQWGT-GLASSGRRLCPGQNLPLFLTAK-EPSRVTGLENSTAV 215
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
G++H+ ++ G +Y WG +G+L R +P+R++ FQ V +
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLP-LPQRIEAHYFQDEKV----TAV 270
Query: 291 SAGSVNSSCTAGGGQLYMWGK------------------------LKNNGDDWMYPKPLM 326
+G + G+++ WG+ L G P PL
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L+G + G+ H+ C SWG ++G G G + P + +
Sbjct: 331 CLTGATE--ISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRL 388
Query: 387 ISVACGYGHSLVI 399
+ V CG GHSL +
Sbjct: 389 LLVGCGAGHSLAV 401
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 28/291 (9%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G + + PT ++ L ++F A C H + G+ Y
Sbjct: 56 LYMFGSNNWGQLGLGSKS---TVSKPTCVKALKPEKVKF--AACGRNHTLVSTEGGKVYA 110
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD +R ++S S+ KIK+ AG + + +TEDG +G N G
Sbjct: 111 AGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEG 170
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
Q+G ++ N P V + ++ +CG + ++++ EG + G P+ G+LG
Sbjct: 171 QIGLENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTT-EG-QLYTFGEPECGKLGLPNQ 227
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N + P+ + + G+ +V+VACG HTV + K VYT+G G +G+
Sbjct: 228 LLVNHR------------MPQPVPGIPGK-VVQVACGGGHTVVLTEKA-VYTFGLGQFGQ 273
Query: 261 LGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
LG E VP+ ++ + + + I+ G +++ G +Y +G
Sbjct: 274 LGLGTFLFETSVPKAIEHIKDQKI----SFIACGENHTALITDMGLMYTFG 320
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 143/354 (40%), Gaps = 50/354 (14%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H V + Y +G N GQLG G K +PT V L K+K A GR+HT+V
Sbjct: 42 CGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLV 101
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
TE G A G N GQLG G + E L+S T+ + + S
Sbjct: 102 STEGGKVYAAGGNNEGQLGLG----DTEERSTFHLISFFTSQR-------KIKQLSAGSN 150
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR---PRAIAALAGETIVKVACGTNHT 241
+A L + G+L DN S ++ E P+ + G+ I ++CG H+
Sbjct: 151 TSAALTEDGELFMWGDN------SEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHS 202
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSC- 299
V ++G +YT+G G+LG +P ++ V N+ +P P I V +C
Sbjct: 203 AFVTTEGQLYTFGEPECGKLG--------LPNQLLV---NHRMPQPVPGIPGKVVQVACG 251
Query: 300 -------------TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
T G GQ G L + PK + + + + G H +
Sbjct: 252 GGHTVVLTEKAVYTFGLGQFGQLG-LGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
D + ++G ++G+LG G + +P V V+CG H+LV
Sbjct: 311 TDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 61/226 (26%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ----------RNNV 283
++CG HT V +Y +G +G+LG + P V + RN+
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 284 LPPEA---VISAGSVN------------------------------------SSCTAGGG 304
L V +AG N S+ G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 305 QLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGH 356
+L+MWG L+N + + P G + + G H FV + ++G
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCV---PQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ G+LG + MP+ V + G V+ VACG GH++V+ ++
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEK 261
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 36/280 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSE--VTATACGADFTVWLSSVEGASILNAG 188
L +G+ GQ G + I P C +S+ V ACG + +V+L +E + G
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFL--LEDGEVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
L GQLGH + +P I ALA + I+ VACG +H++A+ +G
Sbjct: 60 LNTKGQLGHEREGN----------------KPEQIGALADQHIIHVACGESHSLALSDRG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+++WG G G+LG +D VPR + + +L +S G+ + A GQ +
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
WGK L P+ + L G L + +G H F + S + WG
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG +K P V +L V+ ++CG H+ V+
Sbjct: 220 GQLGLS--DEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHG 198
ACG T L+ V + ++ A G GQLG G
Sbjct: 298 QIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHGDKIQ--RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P + L + + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T T+DS PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 T-----TEDSVA--------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG +E + P+RV + P A ++AG +S + G ++ WG + N G
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQ 221
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
D P + L + + G H V S ++G G+LG+
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P++V L G V +ACG H+L V
Sbjct: 282 EVN--PRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKA 115
D + C H +A+ G+ ++WG GQLG + P ++ +L++ I +
Sbjct: 83 DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTV 174
G H + + DG +G N HGQLG G ++ P VR L A
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
+ S+ GA + G+ GQLG + + + P + L + +V +
Sbjct: 203 FALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RESPCHVKLLRTQKVVYI 247
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 248 SCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 38/315 (12%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
V+C H V + +G YT G N +GQLGH + + ++P + L+ I G SH+
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHS 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
+ +++ G ++G GQLG + + + P ++ L + + +CG W L+
Sbjct: 97 LALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN----WHCLAL 152
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G +GQLG G + + +Q P+ + +L G + +VA G
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ A+ G V+ WG G+LG ++KD P V + + V+ IS G +++
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTA 255
Query: 299 CTAGGGQLYMW-----GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
G ++ + G+L ++ +D + P+ +++L G + + G H FV +
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 351 CISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 316 IYAFGCGARGQLGTG 330
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
GN F+ D + G G+LG+ G K P+++ L H+I VACG HSL
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESHSLA 98
Query: 399 IVDR 402
+ DR
Sbjct: 99 LSDR 102
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ ++WG GQLGHG P ++ L ++ K AG H+V ++E
Sbjct: 172 HVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET 231
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +GWN+ GQL + R+ E R E A+ LN
Sbjct: 232 GDIYIWGWNESGQLALPT-RSGTENKAER----------------------EEATELNE- 267
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEA-QPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G E D+ + A QP P + G V +CG+ HT V
Sbjct: 268 --------DGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRT 319
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G +YTWG+G YG+LGH++ P V+ F
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRPCCVEYF 350
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P P LA E V+ + G H + + + G V++WG G +G+LGH + E PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Q + A ++AG +S C + G +Y+WG
Sbjct: 209 ALQGLRM----AKVAAGGWHSVCLSETGDIYIWG 238
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 66/171 (38%), Gaps = 42/171 (24%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL------G 91
G L+ L P L L G+ + VAAG H V + G Y WG NE GQL G
Sbjct: 196 GTLEAEL-EPRLLEALQGLRMAKVAAG--GWHSVCLSETGDIYIWGWNESGQLALPTRSG 252
Query: 92 HGDKIQRDRPTIVSE---LSKYKIKKAGA---------------------------GRSH 121
+K +R+ T ++E + + AGA G H
Sbjct: 253 TENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRH 312
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACG 169
T VVT G +GW K+GQLG + P V V EV A CG
Sbjct: 313 TAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 333 LRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTL--EAELEPRLLEALQGLRMAKVAA 220
Query: 392 GYGHSLVIVDRTNV 405
G HS+ + + ++
Sbjct: 221 GGWHSVCLSETGDI 234
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 159/374 (42%), Gaps = 34/374 (9%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-----HGDKIQRDRPT 102
R +P LV + V A H V + G YT+G N+ G LG G ++Q +
Sbjct: 63 RKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGK-- 120
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLG-SGSIRNEIEPSPVRCL 159
EL++ K+ + AG SHT +TEDG FG + +G +G ++ + P V+ +
Sbjct: 121 --VELAE-KVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQ-I 176
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ V A G D V L +V+G + +G + GQLG + N + E
Sbjct: 177 NTPVIKIASGNDHLVLL-TVDG-DLYTSGCGEQGQLGRVPERFTNRGG---RKGLERLLV 231
Query: 220 PRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P+ I A + V CG T AV +G+VY +G Y +LG + + + P+ +
Sbjct: 232 PQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNL 291
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
F+ N S G ++ C G+ Y G+ L N ++ P P+ DL
Sbjct: 292 TSFK--NSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL 349
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
N ++ + V D +WG +LG G S LE V+S
Sbjct: 350 PKIN-SVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLS 408
Query: 389 VACGYGHSLVIVDR 402
V+ G H++++V +
Sbjct: 409 VSSGGQHTVLLVRK 422
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 136/340 (40%), Gaps = 43/340 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
D++ A + H V G+ T G+ + GQLG G D ++R +P +V+ L++ I +A
Sbjct: 21 DVKKTKALPIVTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVT-LTE-DIVQA 78
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--NEIEPSPVRCLVSEVTATACGADFT 173
AG HTV + G+ FG N G LG + +E++P V L +V + G T
Sbjct: 79 AAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE-LAEKVVQVSAGDSHT 137
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ E + G + + + L + + ++K
Sbjct: 138 AALT--EDGRVFVFG-------------SFRDNNGVIGLLEPMKKSMVPVQVQINTPVIK 182
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE-----------WVPRRVDVFQRNN 282
+A G +H V + G +YT G G G+LG ++ VP+ + + + +
Sbjct: 183 IASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGS 242
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLRC 335
+ G+ + + G +Y +G L N N P+ L
Sbjct: 243 GRVHFQDVFCGAYFTFAVSQEGHVYGFG-LSNYHQLGTKNTQACYAPQNLTSFKNSTKSW 301
Query: 336 MD-SGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSS 372
+ SG HH V DS S G A+YG LG G ++ S
Sbjct: 302 IGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQS 341
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H V + Y +G N GQLG G K +PT V L K+K A GR+
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----------VTATACGA 170
HT+V TE GN A G N GQLG G + SE T+ A
Sbjct: 98 HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157
Query: 171 D--FTVWLSSVEGA----SILNAGLPQYGQLGHGTD--------NEYNTKDSSV------ 210
D +W + EG ++ N +PQ +G + + T D +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEP 217
Query: 211 ---KLAYEAQ----PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
KL Q R + + E +++VACG HTV + ++ VYT+G G +G+LG
Sbjct: 218 ENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL-TENAVYTFGLGQFGQLGL 276
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
E +V R+ + + IS G +++ G +Y +G
Sbjct: 277 GTFLFETSEPKVIENIRDQTI---SYISCGENHTALITDIGLMYTFG 320
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ V+ G + C+ G T+G G LGHG+ +P IV L Y++ +
Sbjct: 397 GVTIKSVSCGDLFTTCLTD--RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + VT + ++G +G+LG + + P V E CG D +
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCS 514
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--AALAGETI 231
+ +S+ IL G ++ +L G D T++ S E + + A L E I
Sbjct: 515 MIMSTQH--QILACGNNRFNKL--GLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKI 570
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V + GT H+VAV KG +T+G +G+LG ++ VP +V Q + +
Sbjct: 571 VYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGIT------MAA 624
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D+ PKP+
Sbjct: 625 CGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPV 663
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P + L+G ++ V C + H +AV E ++WGR + G+LG + + P
Sbjct: 437 DVTQPKIVEALLGYEL--VQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQ 494
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
VS + ++ ++ G +++++ LA G N+ +LG + EPS C V E
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSF-CQVEE 553
Query: 163 ------VTATACGADFTVWL--------SSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
V + + V++ + E G Q+GQLG + + S
Sbjct: 554 VHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCS-----HRRSS 608
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P ++ L G I ACG T+A+ ++G VYTWG G GRLG R+++D
Sbjct: 609 RV---------PYQVSGLQG--ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG-RKEED 656
Query: 269 EWVPRRVDV 277
+P+ V +
Sbjct: 657 FGIPKPVQL 665
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ QP+ R + +G TI V+CG T + +G + T+G G G LGH D P
Sbjct: 382 QMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQP 441
Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK 311
+ V+ +L E V +S G+ + +++ WG+
Sbjct: 442 KIVEA-----LLGYELVQVSCGASHVLAVTNEREVFSWGR 476
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
SG ++ + G++ D I ++G G LG+G + + PK V+ L G ++
Sbjct: 396 SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ--PKIVEALLGYELV 453
Query: 388 SVACGYGHSLVIVDRTNV 405
V+CG H L + + V
Sbjct: 454 QVSCGASHVLAVTNEREV 471
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 22/281 (7%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ G T+G G LGHG+ +PTIV L Y++ +
Sbjct: 396 GVTIKHVACGDLFTACLTD--RGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGAD 171
G SH + ++ DG F W + G E P + V+ E CG D
Sbjct: 454 VACGASHVLALSTDGE--LFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGID 511
Query: 172 FTVWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
++ L+S +L G ++ +LG H + +E V+ A P A L E
Sbjct: 512 SSMILTS--PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFT--PLGSAPLDQE 567
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++ V GT H+ A+ + G YT+G +G+LG ++ P RV + ++ +
Sbjct: 568 PLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV----M 623
Query: 290 ISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
++ G + G++Y WGK L +D P+P+
Sbjct: 624 VACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPV 664
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 33/252 (13%)
Query: 42 GNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GNL PT + L+G ++ V C + H +A+ +G + WGR + G+LG G +
Sbjct: 432 GNLTDISQPTIVEALLGYEM--VQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESH 489
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+ P V + ++ G ++++T G LA G N+ +LG + + EP P +
Sbjct: 490 NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQ 549
Query: 159 LVSEVTATACGAD-------FTVWLSSVEGASI------LNAGLPQYGQLGHGTDNEYNT 205
+ ++ T G+ V L + A+I G Q+GQLG T
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLG--------T 601
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
V A P + L G +V VACG TVAV ++G VY+WG G GRLG R+
Sbjct: 602 SSRRVSRA------PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRD 655
Query: 266 QKDEWVPRRVDV 277
+ D +PR V +
Sbjct: 656 E-DAGLPRPVQL 666
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG FT L+ + I+ G G LGHG N D S +P
Sbjct: 399 IKHVACGDLFTACLT--DRGIIMTFGSGSNGCLGHG-----NLTDIS---------QPTI 442
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF---- 278
+ AL G +V+VACG +H +A+ + G ++ WG G GRLG ++ P++V V
Sbjct: 443 VEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE 502
Query: 279 -QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMD---- 327
QR + G +S G++ G + N G D + P P
Sbjct: 503 AQR---------VVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEA 553
Query: 328 ----------LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
L L C+D G H + A C ++G Q+G+LG ++ S P
Sbjct: 554 LSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTS--SRRVSRAPC 611
Query: 377 KVDILEGMHVISVACGYGHSLVI 399
+V LEG+ ++ VACG ++ +
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAV 634
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 218 PRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+P+ ++ +G TI VACG T + +G + T+G G G LGH D P
Sbjct: 382 PQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPT 441
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+ ++ ++ G+ + + G+L+ W
Sbjct: 442 IVEALLGYEMVQ----VACGASHVLALSTDGELFAW 473
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 133/342 (38%), Gaps = 73/342 (21%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
C+SC H V + Y +G N GQLG G K +PT + L K+K A GR+H
Sbjct: 39 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
T+V T+ G A G N GQLG G R+ + + GA+ + L+
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT-- 156
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E + G GQ+G S+V + +E G+ I ++CG
Sbjct: 157 EDGKLFMWGDNSEGQIGL-------EDKSNVCIPHEVT---------VGKPISWISCGYY 200
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H+ V G +YT+G G+LG +P + + R+ P+ V+
Sbjct: 201 HSAFVTMDGELYTFGEPENGKLG--------LPNELLMNHRS----PQRVLGIPERVIQV 248
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
GGG H V + ++G Q+
Sbjct: 249 ACGGG-------------------------------------HTVVLTEKVVYAFGLGQF 271
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G + ++S PK ++ ++ + ++CG H+ ++ +
Sbjct: 272 GQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHTALMTE 312
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 146/362 (40%), Gaps = 49/362 (13%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G A ++ PT ++ L ++ A C H + G Y
Sbjct: 56 LYMFGSNNWGQLGLGSKAA---IIKPTCIKALKPEKVKL--AACGRNHTLVSTDTGGVYA 110
Query: 82 WGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD RD IV IK+ AG + + +TEDG +G N G
Sbjct: 111 AGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEG 170
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTA------TACGADFTVWLSSVEGASILNAGLPQYGQ 194
Q+G +E C+ EVT +CG + +++ + G P+ G+
Sbjct: 171 QIG-------LEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTM--DGELYTFGEPENGK 221
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG + N + P+ + + E +++VACG HTV + K VY +G
Sbjct: 222 LGLPNELLMNHR------------SPQRVLGIP-ERVIQVACGGGHTVVLTEK-VVYAFG 267
Query: 255 FGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G +G+LG E P+ ++ + + IS G +++ G LY +
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIERIKDQKI----CHISCGENHTALMTELGLLYTFGDGR 323
Query: 310 -GKL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
GKL N + +P + + ++ + G H V A + ++ ++ Y
Sbjct: 324 HGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATPRLGTIDEPKFEDV-YE 382
Query: 366 PY 367
PY
Sbjct: 383 PY 384
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P I AL E + ACG NHT+ G VY G G+LG + D D F
Sbjct: 77 KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTF 130
Query: 279 QRNNVLPPEAVI---SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK-----PLMDLSG 330
+ P I SAG+ S+ G+L+MWG + G + K P G
Sbjct: 131 HQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGD-NSEGQIGLEDKSNVCIPHEVTVG 189
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVIS 388
+ + G H FV D ++G + G+LG + P++V I E VI
Sbjct: 190 KPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQ 247
Query: 389 VACGYGHSLVIVDR 402
VACG GH++V+ ++
Sbjct: 248 VACGGGHTVVLTEK 261
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSK 109
G R V AG + H V VE YTW G GQLGHGDK +P V +L
Sbjct: 368 GCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSE-VTAT 166
I++ G TV VT++G AFG + +G +G + +EP + +S V
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQV 485
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG + V L+ + + G +YG+LG ++ +Y T P+ +
Sbjct: 486 SCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYT--------------PQKVDVP 529
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG + T + G V G + +LG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 113 KKAGAGRSHTVVVTEDGNSLAF-----GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
++ AG +H VVT + + G HGQLG G + +P V L + +
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG DFTV ++ EG + G YG +G K+A P +
Sbjct: 432 SCGDDFTVCVTD-EG-QLYAFGSDYYGCMGVD------------KVAGPEVLEPMQLNFF 477
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L GS + +G K A ++ P +L + + V+ G H V +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVA-GPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEV 501
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG E G+LG + P V I G T ++T+ G LA G N+
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEF 561
Query: 140 GQLG-----SGSIRNE----IEPSPVRCLVSEVT-----ATACGADFTVWLSSVEGASIL 185
+LG SG I +E + + L +++ A G T + E +L
Sbjct: 562 NKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLL 619
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G + GQLG G N K +L P L G+ +++V+CG T+A
Sbjct: 620 TFGCNKCGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAAT 666
Query: 246 SKGYVYTWGFGGYGRLG 262
+++ WG GG GRL
Sbjct: 667 DDNHIFAWGNGGNGRLA 683
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 233 KVACGTNHTVAVDSKGYVYTW-----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+V G H V + +YTW G +G+LGH ++ P+ V+ Q +
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAI---- 428
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+S G + C GQLY +G K G + + P L + + G
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 340 NMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ H V + SWG +YG LG ++ P+KVD+ + + +++V CG + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQKVDVPKALIIVAVQCGCDGTFL 546
Query: 399 I 399
+
Sbjct: 547 L 547
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHH-FVGADSSCISWGHA 357
T+ ++Y+WG K+ P+ L + SG + R + +GN H V + +W +
Sbjct: 343 TSRTSEVYVWGGGKST------PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNM 396
Query: 358 Q-----YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Q +G+LG+G + S PK V+ L+G + V+CG ++ + D
Sbjct: 397 QGGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 30/248 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G + P
Sbjct: 430 DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ 487
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V + ++ G ++++T G +LA G N+ +LG + EP P + +
Sbjct: 488 QVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEA 547
Query: 163 VTATACGAD-------FTVWLSSVEGASI------LNAGLPQYGQLGHGTDNEYNTKDSS 209
++ T G+ ++ L + A++ G Q+GQLG NT+ S
Sbjct: 548 LSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLG------TNTRRGS 601
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
P + L G + VACG TVA+ ++ VY+WG G GRLG R++ D
Sbjct: 602 RA--------PCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDE-DA 652
Query: 270 WVPRRVDV 277
+PR V +
Sbjct: 653 GLPRPVQL 660
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 18/279 (6%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G C+ G T+G G LGHG +PTIV L Y++ +
Sbjct: 390 GVTIKHVACGDFFTACLTD--RGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQ 447
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 448 VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSS 507
Query: 174 VWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L +V G + L G ++ +LG H + E V+ A A L E +
Sbjct: 508 MIL-TVPGQA-LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFT--LLGSAPLDQEPL 563
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ + GT H+ AV + G YT+G +G+LG ++ P +V + + A+++
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKM----AMVA 619
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + ++Y WGK L +D P+P+
Sbjct: 620 CGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPV 658
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 158/389 (40%), Gaps = 55/389 (14%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------K 95
G L +P RL P++ ++ VAAG V GR W E LG G
Sbjct: 319 GGLGTPLRL-PMLNTEVVQVAAG--RTQKAGVTRSGRLILW---EAPPLGAGGGSLLPGA 372
Query: 96 IQRDRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
+++ +P +S S IK G T +T+ G + FG +G LG GS+ +
Sbjct: 373 VEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDIS 432
Query: 152 EPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+P+ V L+ E+ ACGA + LS+ + G G+LG GT ++
Sbjct: 433 QPTIVEALLGYEMVQVACGASHVLALSTER--ELFAWGRGDSGRLGLGTRESHSC----- 485
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKD 268
P+ + G+ +V CG + ++ + G G + +LG H +
Sbjct: 486 ---------PQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGE 536
Query: 269 EWVP-RRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLK------N 314
E VP ++V+ +L P I G+ +S+ G Y +G + N
Sbjct: 537 EPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTN 596
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
P + L G + + G+ +GA+S SWG G LG + +
Sbjct: 597 TRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG---RRDEDAG 653
Query: 374 MPKKVDILEG--MHVISVACGYGHSLVIV 400
+P+ V + E V SV+C +G++L+ V
Sbjct: 654 LPRPVQLDETHPYTVTSVSCCHGNTLLAV 682
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSK 109
G R V AG + H V VE YTW G GQLGHGDK +P V +L
Sbjct: 368 GCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSE-VTAT 166
I + G TV VT++G AFG + +G +G + +EP + +S V
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQV 485
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG + V L+ + + G +YG+LG ++ +Y T P+ +
Sbjct: 486 SCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYT--------------PQRVDVP 529
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG + T + G V G + +LG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 113 KKAGAGRSHTVVVTEDGNSLAF-----GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
++ AG +H VVT + + G HGQLG G + +P V L + +
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG DFTV ++ EG + G YG +G K++ P +
Sbjct: 432 SCGDDFTVCVTD-EG-QLYAFGSDYYGCMGVD------------KVSGPEVLEPMQLNFF 477
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ +V+CG NH V + VY+WG G YGRLG ++D + P+RVDV
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 32/214 (14%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC H V + Y+WG E G+LG + P V I G T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 544
Query: 123 VVVTEDGNSLAFGWNKHGQLG-----SGSIRNE----IEPSPVRCLVSEVT-----ATAC 168
++T+ G LA G N+ +LG SG I +E + + L +++ A
Sbjct: 545 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAP 604
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G T + E +L G + GQLG G N K +L P L G
Sbjct: 605 GKTHTAAID--ERGRLLTFGCNKCGQLGVG-----NYKK---RLGINLLGGP-----LGG 649
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ +++V+CG T+A +++ WG GG GRL
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 233 KVACGTNHTVAVDSKGYVYTW-----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+V G H V + +YTW G +G+LGH ++ P+ V+ Q +
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAI---- 428
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+S G + C GQLY +G K +G + + P L + + G
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 340 NMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ H V + SWG +YG LG ++ P++VD+ + + +++V CG + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQRVDVPKALIIVAVQCGCDGTFL 546
Query: 399 I 399
+
Sbjct: 547 L 547
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHH-FVGADSSCISWGHA 357
T+ ++Y+WG K+ P+ L + SG + R + +GN H V + +W +
Sbjct: 343 TSRTSEVYVWGGGKST------PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNM 396
Query: 358 Q-----YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
Q +G+LG+G + S PK V+ L+G + V+CG ++ + D
Sbjct: 397 QGGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 150/365 (41%), Gaps = 63/365 (17%)
Query: 43 NLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---------H 92
++V RL P++ D + V H A+ +GR YTWG N+ LG +
Sbjct: 92 DVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDEN 151
Query: 93 GDKIQRD----RPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK--HGQLG-S 144
GDK+ D P+ V LS ++ K + T +T++G +G + G LG S
Sbjct: 152 GDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 145 GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
S + EP+ +R + E+ A G D + L++ + G Q QLG
Sbjct: 212 DSQKRTAEPTQMR--LPEICQLATGTDHIIALTTT--GKVYTWGNGQQFQLGRRMLERRR 267
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
+ + P+P LA + I+ V G+ H+ A+D+KG VY WG + G
Sbjct: 268 LQGLT--------PQP-----LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIE 314
Query: 265 EQKDE-----WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------L 312
+ +E P VD + NV I+ G ++ G++ WG+ +
Sbjct: 315 VEDEEEGAVITKPTLVDALEGYNV----KSITGGEHHTLALLEDGRVLAWGRDDRHQLGI 370
Query: 313 KNN-----------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
+N G+++ P + N+ + G H+ V +D SWG A+
Sbjct: 371 PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENY 430
Query: 361 ELGYG 365
E+G G
Sbjct: 431 EVGQG 435
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 145/374 (38%), Gaps = 84/374 (22%)
Query: 79 CYTWGRNERGQLGHG----DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
Y +G +LG G D + R R + K + G H+ ++ DG +
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 135 GWNKHGQLGSGS----------IRNEI---EPSPVRCLVSE--VTATACGADFTVWLSSV 179
G N LG + + N++ PS V +S VT C + T
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT------ 186
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
A+I + G +D DS + A Q R I LA GT+
Sbjct: 187 --AAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLA--------TGTD 236
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISA 292
H +A+ + G VYTWG G +LG R + RR R L P+ + + A
Sbjct: 237 HIIALTTTGKVYTWGNGQQFQLGRR-----MLERR-----RLQGLTPQPLALKNIISVGA 286
Query: 293 GSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKP-LMD-LSGWNLRCMDSGNM 341
GS +S G++Y WG ++++ + + KP L+D L G+N++ + G
Sbjct: 287 GSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEH 346
Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV--------------DILEGM-H 385
H + D ++WG +LG +A+P+ V I+ G+ +
Sbjct: 347 HTLALLEDGRVLAWGRDDRHQLGI-----PDNALPETVVKDEKGNNYYLSTPTIIPGLTN 401
Query: 386 VISVACGYGHSLVI 399
VI V CG H+L +
Sbjct: 402 VIQVVCGTHHNLAV 415
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 104/270 (38%), Gaps = 75/270 (27%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-----RPTIVS 105
+PL +I V AG S H A+D +GR Y WG N Q G + + + +PT+V
Sbjct: 274 QPLALKNIISVGAG--SYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVD 331
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L Y +K G HT+ + EDG LA+G + QLG P L V
Sbjct: 332 ALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI----------PDNALPETVVK 381
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G ++ +LS+ P I
Sbjct: 382 DEKGNNY--YLST-----------------------------------------PTIIPG 398
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVL 284
L +++V CGT+H +AV S G VY+WG +G + +D VP V R+ +
Sbjct: 399 LTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV----RSKAI 452
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
A+ AG+ GGQ + + N
Sbjct: 453 KEVAIRVAGA--------GGQFSIIAGIPN 474
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 40/308 (12%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-GSIRNEIEPSPVRCLVSEVT-ATAC 168
++ +A +G H++++ + L+ G N GQLG G+ R E+ P P++ L + + +C
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSC 82
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + + L+ + G GQLG G E + P+ I L
Sbjct: 83 GKEHS--LAVCHKGRVFAWGAGSEGQLGIGEFKEISFT-------------PKKIMTLND 127
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPE 287
I++V+CG H++A+ V++WG +G+LG +E + P+RV R+ P
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV----RSLEGIPL 183
Query: 288 AVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYP----KPLM--DLSGWNLRCM 336
A ++AG +S + G + WG +L +G + P KPL L + +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN--VPVQSNKPLSVGALKNLGVVYI 241
Query: 337 DSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G+ H V D ++G + G+LGY P +K P+ V+ ++G+ V + CG H
Sbjct: 242 SCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--PQLVERIDGL-VSQIDCGSYH 298
Query: 396 SLVIVDRT 403
+L V T
Sbjct: 299 TLAYVHTT 306
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL---GHGDKIQRDRPT 102
SP R+R L G+ + VAAG H A+ + G + WG N GQL G +Q ++P
Sbjct: 171 SPQRVRSLEGIPLAQVAAG--GAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L + G +HT V+T+DG FG N+ GQLG + P V +
Sbjct: 229 SVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL 288
Query: 163 VTATACGADFTV 174
V+ CG+ T+
Sbjct: 289 VSQIDCGSYHTL 300
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 132/355 (37%), Gaps = 80/355 (22%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-----KIKKAG 116
A C + H + + G+ WG N GQ G G + ++ L + I+K
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR------IANLHQVDGDWPAIEKIA 833
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTV 174
G+ H+ + DG+ FGW GQLG G + N++ P+ V L+ +VT ACG TV
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTV 893
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + +L G YGQ+G D +K + P P L + +
Sbjct: 894 VLT--DTGRVLVCGSGSYGQMG---------VDDDIKKVFAFTPLP-----LGPLRVRDI 937
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV----------- 283
A H++ + V+ W GR + +V +++ Q N
Sbjct: 938 ATHYYHSICITEDNRVFEW-----GRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTN 992
Query: 284 ---------LPPE-------------------AVISAGSVNSSCTAGGGQLYMWGKLKN- 314
LP E ++ G +S+ G LY WGK +
Sbjct: 993 GSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDY 1052
Query: 315 -----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
N ++ M P + + +G + GN H D S +WG +G+ G
Sbjct: 1053 QLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D V+ C H + EG YTWG+ QLGHG+K +R P V E + K
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNV 1079
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
G +HT+ T+DG+ A+G N GQ G + +N
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKN 1113
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 46/276 (16%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+ N + PTR+ G+ + C H V + GR G GQ+G D I++
Sbjct: 866 NSNQLVPTRVN---GLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVF 922
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
L +++ H++ +TED F W ++ Q E++ +R V
Sbjct: 923 AFTPLPLGPLRVRDIATHYYHSICITEDNR--VFEWGRNPQ--------ELK---MRMFV 969
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ-PR 219
+ + A + N P N V L A+ PR
Sbjct: 970 ---------------MKKIRSAQLKNTEDPS------SPSPSTNGSTPRVNLNLPAEIPR 1008
Query: 220 P----RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
R + IV VACG +H+ + S+G +YTWG G +LGH + + P +
Sbjct: 1009 EDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQ- 1067
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
VF+ N +S G+ ++ + G ++ WGK
Sbjct: 1068 -VFEPNGA--KWVNVSLGNNHTIASTDDGSVFAWGK 1100
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 64/184 (34%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
RPRAIA CG H + + S G + WG +G+
Sbjct: 777 RPRAIA-----------CGAEHILVLSSSGQLSAWGGNRFGQ------------------ 807
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
G G + L DW P ++ + C
Sbjct: 808 ----------------------CGVGHSFRIANLHQVDGDW----PAIE----KIAC--- 834
Query: 339 GNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H F+ +D S ++G +G+LG+G + +P +V+ L V +ACG H++
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRAHTV 893
Query: 398 VIVD 401
V+ D
Sbjct: 894 VLTD 897
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 46/237 (19%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G +L CGS + +G +P L PL DI H + + + R
Sbjct: 899 GRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI-----ATHYYHSICITEDNRV 953
Query: 80 YTWGRNER--------------GQL--------------GHGDKIQRDRPTIVS------ 105
+ WGRN + QL G ++ + P +
Sbjct: 954 FEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGL 1013
Query: 106 -ELSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
E+ + I G SH+ ++T +G +G QLG G+ +EP V
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNG 1073
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
++ + G + T+ +S + S+ G +GQ G T N+ D + K ++A+
Sbjct: 1074 AKWVNVSLGNNHTI--ASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVTKKFFFQAR 1128
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 30/284 (10%)
Query: 47 PTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P RL+ G+++ A+G H + + R Y+ G N GQLG +RP +
Sbjct: 12 PRRLKAGTSGIELLQAASG--EHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLV-SEV 163
L+ + G+ H+V V G A+G GQLG G + P+ ++ L ++
Sbjct: 70 ALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKI 129
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG ++ LS E + + G GQLG G ++ +Q P+ +
Sbjct: 130 IQVSCGHYHSLALS--EDGHVFSWGRNSEGQLGLGKNS-------------RSQAIPQKV 174
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDEWVPRRVDVFQR 280
+L G + +VA G H+ A+ G + WG G+L G++ ++ + P + +
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
+V+ IS G +++ GQ++ +G N + P P
Sbjct: 235 LSVI----YISCGYEHTAVLTEEGQVFTFG---GNSSGQLQPSP 271
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%)
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ A G ++ L S + + G +GQLG D ++ RP
Sbjct: 23 ELLQAASGEHHSLLLFS--NHRVYSCGDNSWGQLGQRRD--------------QSTERPE 66
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQR 280
I AL + V+CG H+VAV KG V+ WG G G+LG E K+ ++P ++
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAG 126
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNL 333
++ +S G +S + G ++ WG+ L N P+ + L G L
Sbjct: 127 IKIIQ----VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGMHVISVAC 391
+ +G H F + + WG + G+L G ++ P + L+ + VI ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 392 GYGHSLVIVDRTNV 405
GY H+ V+ + V
Sbjct: 243 GYEHTAVLTEEGQV 256
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 219 RPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+PR + A +G +++ A G +H++ + S VY+ G +G+LG R + P +
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
+V ++S G +S G+++ WG + + P + L+G
Sbjct: 71 LNDLHV----DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAG 126
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + D SWG G+LG G +S A+P+KV LEG+ + V
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK-NSRSQAIPQKVKSLEGIPLAQV 185
Query: 390 ACGYGHSLVI 399
A G HS +
Sbjct: 186 AAGGTHSFAL 195
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
R V AG H V VE YTW G GQLGHGD+ +P V +L ++
Sbjct: 354 RQVCAG--DAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSE-VTATAC 168
K G TV +T++G +FG + +G LG +GS +EP V ++E V +C
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGS--EVLEPLLVDFFLNEPVDQVSC 469
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + L+ S+ + G +YG+LG ++++ + P+ + G
Sbjct: 470 GDSHIMALT--RSKSVYSWGCGEYGRLGLDSEDDVYS--------------PQKVEVQRG 513
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG++ + + G V G + +LG
Sbjct: 514 LCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLG 547
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 41/307 (13%)
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAF-----GWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
++ ++ AG +H VVT + + G HGQLG G + +P V L + V
Sbjct: 351 WRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSV 410
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG+DFTV ++ EG + + G YG LG N S L P +
Sbjct: 411 QKVSCGSDFTVCITD-EG-QLYSFGSDYYGCLG------VNQSAGSEVL------EPLLV 456
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
E + +V+CG +H +A+ VY+WG G YGRLG + D + P++V+V QR
Sbjct: 457 DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV-QRGLC 515
Query: 281 ----------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM--- 326
+ +L + A +N G Q Y G + + + Y L
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQ-YTAGIINHEAFQEVPYTTSLTLAK 574
Query: 327 DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
LS + +R + G H + +++G + G+LG G Y +K + L G
Sbjct: 575 QLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY-RKHLGINLLGGPLGGKQ 633
Query: 386 VISVACG 392
VI V+CG
Sbjct: 634 VIRVSCG 640
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 63/215 (29%)
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ G +GQLGHG Y +P+ + L G+++ KV+CG++ TV +
Sbjct: 378 MQGGSKLHGQLGHGDRASYR--------------QPKHVEKLQGKSVQKVSCGSDFTVCI 423
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
+G +Y++G YG LG V+ + VL P V
Sbjct: 424 TDEGQLYSFGSDYYGCLG------------VNQSAGSEVLEPLLV--------------- 456
Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
D+ +P+ +S C DS M + S SWG +YG LG
Sbjct: 457 -------------DFFLNEPVDQVS-----CGDSHIMA--LTRSKSVYSWGCGEYGRLGL 496
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ P+KV++ G+ +++V CG S ++
Sbjct: 497 D--SEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLL 529
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 12/204 (5%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
VSC H +A+ Y+WG E G+LG + P V I G +
Sbjct: 467 VSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGS 526
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW-LSSVEG 181
++T G LA G N+H +LG I V T+ + + + S+
Sbjct: 527 FLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISP 586
Query: 182 ASILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
A + + G+L G + D L P L G+ +++V+CG
Sbjct: 587 GRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGP-----LGGKQVIRVSCGD 641
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLG 262
T A + +++ WG GG GRL
Sbjct: 642 EFTTAATADNHIFAWGNGGNGRLA 665
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG-WN 332
+V + R+N P ++ + + T+ ++Y+WG K P+ L G W
Sbjct: 300 KVSMLNRSNKKPRTGTVTEAPI-AVVTSRSSEVYVWGGGKTT------PQKLDVFKGGWR 352
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQ-----YGELGYGPYGQKSSAMPKKVDILEGMHV 386
R + +G+ H V + +W + Q +G+LG+G + S PK V+ L+G V
Sbjct: 353 ARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHG--DRASYRQPKHVEKLQGKSV 410
Query: 387 ISVACGYGHSLVIVD 401
V+CG ++ I D
Sbjct: 411 QKVSCGSDFTVCITD 425
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKA 115
I+ V C + + +G +T+GR + G+LG G++ + + P +V L + I
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS---------EVTA 165
+G H++V+T G +FG N GQLG G N+ P ++ + +
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+ G ++ +S + G YG LG D + D ++ + +
Sbjct: 458 VSAGGYHSIAIS--DNNDTYAWGRSDYGVLGTSIDVQ---GDRNLPVLINSNS-----VV 507
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ + V+ G H VA+ G +Y+WG RLG + +++ P++
Sbjct: 508 VDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 116/310 (37%), Gaps = 73/310 (23%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTIVS--------- 105
+R V+ H +A+ + G+ Y+WG N+ QLG G+ P +++
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNN 302
Query: 106 -------------------------------ELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
+K KI K G + + V+T+ G F
Sbjct: 303 NNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTF 362
Query: 135 GWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL--NAGL- 189
G HG+LG G S+ + P V+ L F + +SS G S++ N GL
Sbjct: 363 GRGDHGRLGLGEQSLLMQSTPKLVQSLQGH---------FIIDMSSGGGHSLVLTNKGLV 413
Query: 190 -----PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
GQLG G + T ++ +Q I+KV+ G H++A+
Sbjct: 414 FSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQ-----QQQQQPINIIKVSAGGYHSIAI 468
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCT 300
Y WG YG LG D R + V +N + + V +S+G ++
Sbjct: 469 SDNNDTYAWGRSDYGVLG--TSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAM 526
Query: 301 AGGGQLYMWG 310
+ G LY WG
Sbjct: 527 SIDGSLYSWG 536
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
IVK++CGTN + + KG ++T+G G +GRLG EQ + P+ V Q + ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID--- 396
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGW--------NL 333
+S+G +S G ++ +G+ + PK + N+
Sbjct: 397 -MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINI 455
Query: 334 RCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVD----ILEGMHVIS 388
+ +G H +D++ +WG + YG LG Q +P ++ +++ + I
Sbjct: 456 IKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFID 515
Query: 389 VACGYGHSLVI-VDRT------NVGERL 409
V+ G+ H++ + +D + N G+RL
Sbjct: 516 VSSGFQHNVAMSIDGSLYSWGCNAGQRL 543
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSE----LSK 109
++I V+AG H +A+ Y WGR++ G LG +Q DR P +++ +
Sbjct: 453 INIIKVSAG--GYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDN 510
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT--- 166
K +G H V ++ DG+ ++G N +LG S N++ +P +C ++ +
Sbjct: 511 VKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQL--TPKKCFINSKDSKPLL 568
Query: 167 -ACGADFTV 174
CG T+
Sbjct: 569 FTCGEIITI 577
Score = 35.8 bits (81), Expect = 0.89, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKK 114
I ++ G + H + +G YT+G G+LGHG+ P +V ++
Sbjct: 190 IVLISTGAI--HSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G H++ +T G ++G N QLG G+
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 28/241 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V + IK+ + H+V +++ G G
Sbjct: 146 YTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHG 205
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLG 196
+ G+LG G + P V L GA D TV L+ E + GL + QLG
Sbjct: 206 QGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLT--EDGYVYTFGLNTFHQLG 263
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ +S+V PR I A + G+T++ VA G HTV + +K VYT G
Sbjct: 264 ----IQPPPPNSNV---------PRQIQAKTMKGKTVLGVAAGRFHTV-LWTKDAVYTVG 309
Query: 255 FGGYGRLGHRE----QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG+ + +K PR+V ++ ++SA + C + G +Y+
Sbjct: 310 LNG-GQLGYLQDPNGEKFVSCPRQVSALHHKDI--NITLVSASDGATVCVSERGDIYLLS 366
Query: 311 K 311
+
Sbjct: 367 E 367
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G + G+LGHGD++ P +V L + + + HTVV+TED
Sbjct: 189 HSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTED 248
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G FG N QLG I+P P V + +++G ++L
Sbjct: 249 GYVYTFGLNTFHQLG-------IQPPPPNSNVPR----------QIQAKTMKGKTVLGVA 291
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-------PRAIAALAGE--TIVKVACGTN 239
++ + D Y + +L Y P PR ++AL + I V+
Sbjct: 292 AGRFHTVLWTKDAVYTVGLNGGQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDG 351
Query: 240 HTVAVDSKGYVY 251
TV V +G +Y
Sbjct: 352 ATVCVSERGDIY 363
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHGT + + E PR +G I ++ H+V + KG VYT G
Sbjct: 156 LGHGTQQSKHHPE-----LVEMFPR-------SGVYIKQMVLCKFHSVFLSQKGQVYTCG 203
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G GRLGH ++ VPR V+ + + P ++ ++ G +Y +G L
Sbjct: 204 HGQGGRLGHGDELTCLVPRLVEGLRGH----PCTQVAGAKDHTVVLTEDGYVYTFG-LNT 258
Query: 315 NGDDWMYPKP----------LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
+ P P + G + + +G H + + + G G+LGY
Sbjct: 259 FHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDAVYTVG-LNGGQLGY 317
Query: 365 --GPYGQKSSAMPKKVDIL--EGMHVISVACGYGHSLVIVDRTNV 405
P G+K + P++V L + +++ V+ G ++ + +R ++
Sbjct: 318 LQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDI 362
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YTWG LGH Q+ + P V++F R+ V + V+ +S + GQ+Y
Sbjct: 145 LYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC--KFHSVFLSQKGQVYTC 202
Query: 310 GKLK----NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGEL 362
G + +GD+ + P+ + L G + H V D ++G + +L
Sbjct: 203 GHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQL 262
Query: 363 GYGPYGQKSSAMPKKVD--ILEGMHVISVACGYGHSLV 398
G P +S +P+++ ++G V+ VA G H+++
Sbjct: 263 GIQP-PPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVL 299
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 34/263 (12%)
Query: 23 LFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
+F + D+ G +DGN +P L + G +A+G + H V + G+ +T
Sbjct: 147 VFAWGSFRDSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASG--ADHLVILTTAGKVFTV 202
Query: 83 GRNERGQLG---------HGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
G E+GQLG G + +RD RPT + +++ K +A ++ + E
Sbjct: 203 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI-ITRAKPFEAIWATNYCTFMRESQTQ 261
Query: 132 L--AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
+ A G N QL + E +P++ + ++ A G TV L++ S++ G
Sbjct: 262 VIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVV--GR 319
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
P+YG+LG G VK E +P + L E IV V CG + AV G
Sbjct: 320 PEYGRLGLG----------DVKDVVE---KPTIVKKLT-EKIVSVGCGEVCSYAVTIDGK 365
Query: 250 VYTWGFGGYGRLGHREQKDEWVP 272
+Y+WG G +LG + DE P
Sbjct: 366 LYSWGSGVNNQLGVGDGDDELEP 388
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 109/288 (37%), Gaps = 55/288 (19%)
Query: 63 AGCVSC---HCVAVDVEGRCYTWG--RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
A C+S H + +GR + WG R+ G +G I ++ T + + +
Sbjct: 128 ALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL--TIDGNKRTPIDLMEGTVCCSIAS 185
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGS-----------IRNEIEPSPVRCLVSEVTAT 166
G H V++T G G + GQLG S R+ + P+ + ++
Sbjct: 186 GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEA 245
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
++ ++ + I GL + QL H E + + A+ +
Sbjct: 246 IWATNYCTFMRESQTQVIWATGLNNFKQLAH-----------------ETKGKEFALTPI 288
Query: 227 AGET--IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
E I +A G +HTV + + G YGRLG + K DV ++ ++
Sbjct: 289 KTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVK--------DVVEKPTIV 340
Query: 285 P--PEAVISA--GSVNSSCTAGGGQLYMWGKLKNN------GDDWMYP 322
E ++S G V S G+LY WG NN GDD + P
Sbjct: 341 KKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 197/490 (40%), Gaps = 45/490 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGR 78
G +L CG+ +G L +++ RL P+ G+ D ++AG + H + + G
Sbjct: 42 GNVLVCGNGDVGQLG-----LGEDILERKRLSPVAGIPDAVDISAGGM--HNLVLTKSGD 94
Query: 79 CYTWGRNERGQLGH--GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG- 135
Y++G N+ G LG + +P ++ K AG SH+ + EDG A+G
Sbjct: 95 IYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC--ISAGDSHSACLLEDGRVFAWGS 152
Query: 136 -WNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYG 193
+ HG +G N+ +P+ + V + A GAD V L++ + G + G
Sbjct: 153 FRDSHGNMGLTIDGNK--RTPIDLMEGTVCCSIASGADHLVILTT--AGKVFTVGCAEQG 208
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV-YT 252
QLG ++ + + K RP + + + T +S+ V +
Sbjct: 209 QLGRLSERSISGEGRRGKRDLL---RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWA 265
Query: 253 WGFGGYGRLGHREQKDEW--VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G + +L H + E+ P + ++ ++ + + + C+ G Y
Sbjct: 266 TGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRL 325
Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
L + D P + L+ + + V D SWG +LG G +
Sbjct: 326 GLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDE 385
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQLDVYDGKASSQDNEEIDRN 430
+ +G H++ + G H++ +V ++ DQ + K S + I +
Sbjct: 386 LEPIVVVSKNTQGKHMLLASGGGQHAIFLVK----ADKQDQKENVPVKVSG--SSSISKK 439
Query: 431 STVPPKKGAAKVSNNSKKRK-------KSKDSSEEEEE--EENSDYESDDSEEQANGQSE 481
PP+ K + N K++ K+ SS++ + ++N+D E+++ ++Q E
Sbjct: 440 DKTPPQDNVDKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEAENVDKQ-----E 494
Query: 482 RKKQAGGKAS 491
+K+ KAS
Sbjct: 495 QKENLPAKAS 504
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 28/240 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWG 254
SS + PR I A L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSSCNV-------PRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMG 308
Query: 255 FGGYGRLGHRE----QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG +K PR+V ++ ++++A + C G +Y+
Sbjct: 309 LNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDI--ALSLVAASDGATVCVTTRGDIYLLA 365
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G G+LGHGD+ P +V L+ + + A + HTVV+TED
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
G FG N QLG I P P C
Sbjct: 248 GCVYTFGLNIFHQLG-------IIPPPSSC 270
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDD--WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + L+G N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVD--ILEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 33/269 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLG-HGDKIQRDR-PTIVSELSKYKIK 113
++ A +SC A+ G Y WG R G LG + DKI+ + P V SKY I
Sbjct: 168 VQLAATDNMSC---ALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIV 224
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR----NEIEPSPVRCLVSEVTATACG 169
+ G+ H + + E+G A+G + QLG + ++P P + V A G
Sbjct: 225 QLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFG--LRHVKYIASG 282
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ L+ + +++ GL Q+GQ G D E D ++ +P+ +A
Sbjct: 283 ENHCFALT--KDNKLVSWGLNQFGQCGVSEDVE----DGALVT------KPKRLALPDNV 330
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWV-------PRRVDVFQRN 281
I +A G +H++ + G +Y+ G +G ++ E+ R V + +
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKL 390
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
N +P ++AGS +S A G Y WG
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 27/251 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE--LSKYKIKKAGAGRSHTVVVT 126
H + +D EG + WG ++ QLG ++R R + +K +G +H +T
Sbjct: 232 HILFLDEEGMVFAWGNGQQNQLGR-KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALT 290
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-----PSPVRCLVSE---VTATACGADFTVWLSS 178
+D +++G N+ GQ G + ++E P R + + + + A G ++ LS
Sbjct: 291 KDNKLVSWGLNQFGQCG---VSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS- 346
Query: 179 VEGASILNAGLPQYGQLGHGTDN--EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + + G ++G DN EY KD K A P P + + VA
Sbjct: 347 -QDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKA--RAVPLPTKLNNVP--KFKSVAA 401
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSV 295
G++H+VAV G Y+WGFG +G +D+ VP R+ +N +I G
Sbjct: 402 GSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRI----KNTATQDHNIILVGCG 457
Query: 296 NSSCTAGGGQL 306
+GG +L
Sbjct: 458 GQFSVSGGVKL 468
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG--GYGRLGHREQKDEW--VPR 273
PR G +V++A N + A+ S G VY WG G LG + K + P
Sbjct: 154 PRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPW 213
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM--YPKPLMDLS 329
+V F + N++ ++ G + G ++ WG + N G M + +D
Sbjct: 214 KVPTFSKYNIVQ----LAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPR 269
Query: 330 GWNLR---CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM--PKKVDILEG 383
+ LR + SG H F + D+ +SWG Q+G+ G + + + PK++ + +
Sbjct: 270 PFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDN 329
Query: 384 MHVISVACGYGHSLVIV---DRTNVGERLDQLDV 414
+ + S+A G HSL++ D + G RLD +V
Sbjct: 330 VVIRSIAAGEHHSLILSQDGDLYSCG-RLDMFEV 362
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 20/134 (14%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---------- 92
NL P + L IR V+ C H +A+ E Y WG N+ GQL +
Sbjct: 216 NLNEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSN 275
Query: 93 ---------GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG-NSLAFGWNKHGQL 142
D + +D P +++ ++ KI + G HT+++ + N L+FG NK GQL
Sbjct: 276 NNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQL 335
Query: 143 GSGSIRNEIEPSPV 156
G+G+ ++ P +
Sbjct: 336 GNGNFIDQSNPCVI 349
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 28/134 (20%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGHGDK 95
G D ++ +PT + P G + V CH + + G YT+G N+ GQLG
Sbjct: 17 GNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLYTFGSNDSGQLGINSN 76
Query: 96 ------------------------IQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTEDG 129
+ PTI++ +++ KIK G +H++ +G
Sbjct: 77 EQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKNCSGGWAHSLACDNNG 136
Query: 130 NSLAFGWNKHGQLG 143
N ++G N HGQLG
Sbjct: 137 NIYSWGSNSHGQLG 150
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 219 RPRAIAALAGETI--VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L I V V+CG H++A+ S+ VY WG +G+L +
Sbjct: 219 EPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSN 265
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 78 RCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSL 132
+ Y+WG GQLG G+ PT+V K + G H++++ ++G+
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 133 AFGWNKHGQLGSGS 146
FG N GQLG S
Sbjct: 62 TFGSNDSGQLGINS 75
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 135/351 (38%), Gaps = 67/351 (19%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L PL+ ++ A G H V + G+ Y++G N+ G LG ++ +
Sbjct: 62 LVPLLQDVVQAEAGGM---HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ 118
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGS-GSIRNEIEPSPVRCLVSEVTAT 166
K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L + V
Sbjct: 119 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVKV 177
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G D V L++ + G + GQLG + + L PR + +
Sbjct: 178 ASGNDHLVMLTN--DGDLYTLGCGEQGQLGR-VPELFANRGGRQGLGRLLVPRCVLLKSR 234
Query: 227 AGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
V+ CG T A+ +G+VY +G Y +LG ++P+ + F
Sbjct: 235 GTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSF----- 289
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
KN+ W+ G+ SG HH
Sbjct: 290 -----------------------------KNSTKSWV---------GF------SGGQHH 305
Query: 344 FVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V DS S G A+YG LG G G + ++P + L V SVACG
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLP--VVSSVACG 353
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-----------PT 102
V +D V + H V + +G YT G E+GQLG ++ +R P
Sbjct: 168 VQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPR 227
Query: 103 IVSELSK-----YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
V S+ + + A G T ++ +G+ FG + + QLG+ + P +
Sbjct: 228 CVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLT 287
Query: 158 CLVSEV---TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ + G TV + S EG + + G +YG+LG G E + S+
Sbjct: 288 SFKNSTKSWVGFSGGQHHTVCMDS-EGKAY-SLGRAEYGRLGLGEGAE----EKSI---- 337
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I+ L + VACG + AV G V+ WG G +LG + +D W P
Sbjct: 338 -----PTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP 388
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 23/138 (16%)
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E +L G GQLG G K + V L + +V+ G
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---------------QDVVQAEAGGM 77
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HTV + G VY++G G LG + E VP +V++ ++ +SAG ++
Sbjct: 78 HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK------VVQVSAGDSHT 131
Query: 298 SCTAGGGQLYMWGKLKNN 315
+ G++++WG ++N
Sbjct: 132 AALTEDGRVFLWGSFRDN 149
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RSH TE G L G GQLG G E + + L+ +V G TV LS
Sbjct: 28 RSHN---TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLS- 83
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + + G G LG +D+SV+ E P + E +V+V+ G
Sbjct: 84 -QSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAGD 128
Query: 239 NHTVAVDSKGYVYTWG 254
+HT A+ G V+ WG
Sbjct: 129 SHTAALTEDGRVFLWG 144
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 135/353 (38%), Gaps = 65/353 (18%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
R +P LV + V A H V + G+ Y++G N+ G LG ++
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE 116
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGS-GSIRNEIEPSPVRCLVSEVT 164
+ K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V V
Sbjct: 117 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP-VV 175
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D V L++ + G + GQLG + + L P+ +
Sbjct: 176 KVASGNDHLVMLTA--DGDLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVMLK 232
Query: 225 ALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ V+ CG T A+ +G+VY +G Y +LG + ++P+ + F
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF--- 289
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
KN+ W+ G+ SG
Sbjct: 290 -------------------------------KNSTKSWV---------GF------SGGQ 303
Query: 342 HHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
HH V DS S G A+YG LG G G + ++P + L V SVACG
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLPA--VSSVACG 353
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 39/251 (15%)
Query: 44 LVSPTR--LRPL-VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
L+ P + + P+ V +D+ V + H V + +G YT G E+GQLG ++ +R
Sbjct: 155 LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 101 -----------PTIVSELSK-----YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
P V S+ + + A G T ++ +G+ FG + + QLG+
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGT 274
Query: 145 GSIRNEIEPSPVRCLVSEV---TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
+ P + + + G TV + S EG + + G +YG+LG G
Sbjct: 275 PGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDS-EGKA-YSLGRAEYGRLGLGE-- 330
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
E + P I+ L + VACG + AV G V+ WG G +L
Sbjct: 331 -----------GAEEKSIPTLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQL 377
Query: 262 GHREQKDEWVP 272
G + +D W P
Sbjct: 378 GTGQDEDAWSP 388
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RSH+ TE G L G GQLG G E + + + +V G TV LS
Sbjct: 28 RSHS---TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLS- 83
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + + G G LG +D+SV+ E P + E +V+V+ G
Sbjct: 84 -KSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAGD 128
Query: 239 NHTVAVDSKGYVYTWG 254
+HT A+ G V+ WG
Sbjct: 129 SHTAALTDDGRVFLWG 144
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 126/327 (38%), Gaps = 60/327 (18%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-- 158
P + + K+ + GR+H++V+T+ + G N HGQ G + +E+ +
Sbjct: 162 PLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHR 221
Query: 159 ---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+V CG D +++L+ + + + G GQ G G YN + KL +
Sbjct: 222 MQDFDGQVVQVVCGQDHSLFLT--DKGEVYSCGWGADGQTGLG---HYNITSTPSKLGGD 276
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRR 274
LAG T+V+VA + +A+ + G V+ WG Y +L + VPR
Sbjct: 277 ----------LAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPR- 325
Query: 275 VDVFQRNNVLPPEAV-----ISAGSVNSSCTAGGGQLYMWG--------KLKNNGDDWMY 321
LP V ++ G + G +++WG KL M
Sbjct: 326 --------CLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMI 377
Query: 322 PKPLMDLSGWN-------LRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSS 372
P L L+ +N +RC + HF + WG G LG G +
Sbjct: 378 PPTLFGLTEFNPEVQVSQIRC----GLSHFAALTNKGELFVWGKNIRGCLGIGRL--EDQ 431
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVI 399
P +V + + VACG H + +
Sbjct: 432 YFPWRVTMPG--EPVDVACGVDHMVTL 456
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 29/233 (12%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKK 114
D + V C H + + +G Y+ G GQ G G P+ + +L+ + +
Sbjct: 225 FDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQ 284
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGA 170
+ ++ DG FGW L S+ + + + RCL V +V ACG
Sbjct: 285 VATYGDCCLALSADGG--VFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGG 342
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAIAALAG 228
G ++LNA GH Y KL A P P + L
Sbjct: 343 T---------GCAVLNAE-------GHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTE 386
Query: 229 ET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ ++ CG +H A+ +KG ++ WG G LG +D++ P RV +
Sbjct: 387 FNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM 439
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 133/343 (38%), Gaps = 51/343 (14%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV + + G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQVYSFG 92
Query: 136 WNKHGQLGSGSIR--NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG + +E+ P V L +V + G T L+ E + G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALT--EDGRVFLWG----- 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+ + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 --------SFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTL 196
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI-----SAGSVNSSCTAGGGQL-- 306
G G G+LG + E R +L P+ V+ S G V G L
Sbjct: 197 GCGEQGQLG---RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTF 253
Query: 307 ------YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD---------SGNMHHFVGADSS- 350
+++G +N P NL SG HH + DS
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEG 313
Query: 351 -CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
S G A+YG LG G G + ++P + L V SVACG
Sbjct: 314 KAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLP--VVSSVACG 353
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-----------PT 102
V +D+ V + H V + +G YT G E+GQLG ++ +R P
Sbjct: 168 VQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPK 227
Query: 103 IVSELSK-----YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
V S+ + + A G T ++ +G+ FG + + QLG+ + P +
Sbjct: 228 CVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLT 287
Query: 158 CLVSEV---TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ + G T+ + S EG + + G +YG+LG G E + S+
Sbjct: 288 SFKNSTKSWVGFSGGQHHTICMDS-EGKAY-SLGRAEYGRLGLGEGAE----EKSI---- 337
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
P I+ L + VACG + AV G V+ WG G +LG + +D W P
Sbjct: 338 -----PTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVE 390
Query: 275 VDVFQRNN 282
+ Q N
Sbjct: 391 MTGKQLEN 398
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E +L G GQLG G K + V L + +V+ G
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---------------QDVVQAEAGGM 77
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HTV ++ G VY++G G LG + E VP +V++ ++ +SAG ++
Sbjct: 78 HTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK------VVQVSAGDSHT 131
Query: 298 SCTAGGGQLYMWGKLKNN 315
+ G++++WG ++N
Sbjct: 132 AALTEDGRVFLWGSFRDN 149
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RSH TE G L G GQLG G E + + L+ +V G TV L+
Sbjct: 28 RSHK---TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLN- 83
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + + G G LG +D+SV+ E P + E +V+V+ G
Sbjct: 84 -QSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAGD 128
Query: 239 NHTVAVDSKGYVYTWG 254
+HT A+ G V+ WG
Sbjct: 129 SHTAALTEDGRVFLWG 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,457,544
Number of Sequences: 539616
Number of extensions: 10552072
Number of successful extensions: 93193
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 1019
Number of HSP's that attempted gapping in prelim test: 68134
Number of HSP's gapped (non-prelim): 15727
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)