Query 009250
Match_columns 539
No_of_seqs 502 out of 2266
Neff 11.2
Searched_HMMs 46136
Date Thu Mar 28 22:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009250.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009250hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.5E-43 1.4E-47 332.5 42.2 438 87-533 11-472 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 7.8E-43 1.7E-47 354.2 38.0 421 83-522 163-740 (742)
3 PRK10077 xylE D-xylose transpo 100.0 2.4E-40 5.1E-45 332.8 43.6 432 85-535 10-477 (479)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.3E-40 2.9E-45 334.6 33.9 430 83-528 12-501 (502)
5 TIGR00879 SP MFS transporter, 100.0 3.2E-39 6.8E-44 325.7 40.1 436 83-524 24-479 (481)
6 KOG0254 Predicted transporter 100.0 1.1E-38 2.3E-43 320.5 41.2 443 84-534 42-502 (513)
7 COG2271 UhpC Sugar phosphate p 100.0 1.9E-39 4.2E-44 294.1 19.8 398 83-516 25-435 (448)
8 COG2814 AraJ Arabinose efflux 100.0 1.1E-37 2.4E-42 287.6 30.5 373 84-515 10-386 (394)
9 PRK10642 proline/glycine betai 100.0 2.1E-37 4.5E-42 310.2 32.8 399 86-521 15-435 (490)
10 TIGR00898 2A0119 cation transp 100.0 2.9E-38 6.3E-43 319.4 26.5 391 108-524 110-503 (505)
11 PRK12307 putative sialic acid 100.0 5E-36 1.1E-40 296.7 32.3 376 84-498 15-391 (426)
12 KOG0253 Synaptic vesicle trans 100.0 1.5E-35 3.1E-40 261.6 30.2 417 83-523 74-527 (528)
13 PRK09556 uhpT sugar phosphate 100.0 7.7E-37 1.7E-41 304.7 24.8 396 85-512 27-446 (467)
14 PF00083 Sugar_tr: Sugar (and 100.0 1.7E-42 3.7E-47 345.4 -16.2 431 92-530 5-451 (451)
15 PRK03545 putative arabinose tr 100.0 9.4E-36 2E-40 290.6 31.3 373 85-515 7-380 (390)
16 PRK11663 regulatory protein Uh 100.0 1.8E-36 3.8E-41 299.1 25.6 401 85-519 21-428 (434)
17 PRK10406 alpha-ketoglutarate t 100.0 3.2E-35 7E-40 290.2 34.2 380 84-512 19-421 (432)
18 PRK09705 cynX putative cyanate 100.0 2.3E-35 5E-40 287.2 32.5 378 85-522 8-388 (393)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.4E-36 1.2E-40 293.1 27.6 395 84-504 5-410 (412)
20 PRK11551 putative 3-hydroxyphe 100.0 3.1E-35 6.7E-40 289.2 31.0 381 83-512 11-393 (406)
21 TIGR00891 2A0112 putative sial 100.0 8.5E-35 1.8E-39 286.6 33.7 388 83-498 8-399 (405)
22 TIGR00903 2A0129 major facilit 100.0 5E-35 1.1E-39 279.9 28.8 354 100-512 4-362 (368)
23 TIGR00890 2A0111 Oxalate/Forma 100.0 8.3E-35 1.8E-39 283.8 27.2 369 89-508 6-375 (377)
24 PRK09952 shikimate transporter 100.0 9.4E-34 2E-38 279.6 34.7 385 84-517 19-434 (438)
25 PRK03893 putative sialic acid 100.0 3.8E-34 8.3E-39 289.0 31.8 408 84-506 17-444 (496)
26 PRK14995 methyl viologen resis 100.0 5.7E-34 1.2E-38 285.5 29.9 388 84-490 3-413 (495)
27 PRK15075 citrate-proton sympor 100.0 1.9E-33 4.1E-38 277.7 32.9 361 85-494 13-398 (434)
28 PRK05122 major facilitator sup 100.0 9.4E-34 2E-38 277.9 30.3 364 87-513 15-387 (399)
29 PRK11273 glpT sn-glycerol-3-ph 100.0 1.3E-33 2.8E-38 280.3 29.1 397 85-516 27-436 (452)
30 TIGR00893 2A0114 d-galactonate 100.0 2.7E-34 5.8E-39 282.4 24.1 390 96-512 3-396 (399)
31 PRK15034 nitrate/nitrite trans 100.0 5.6E-33 1.2E-37 266.5 30.9 376 86-517 33-456 (462)
32 PRK10091 MFS transport protein 100.0 3.7E-33 8.1E-38 271.2 30.1 371 88-515 4-376 (382)
33 PRK10213 nepI ribonucleoside t 100.0 9.8E-33 2.1E-37 268.5 32.6 368 84-510 17-386 (394)
34 PRK12382 putative transporter; 100.0 1.3E-32 2.7E-37 269.1 32.8 363 89-514 17-388 (392)
35 KOG0252 Inorganic phosphate tr 100.0 1.4E-34 3E-39 263.7 17.4 439 82-532 36-514 (538)
36 KOG1330 Sugar transporter/spin 100.0 9.1E-35 2E-39 266.4 15.1 379 80-491 26-413 (493)
37 PRK03633 putative MFS family t 100.0 6.6E-32 1.4E-36 262.5 34.0 362 88-511 7-368 (381)
38 PRK03699 putative transporter; 100.0 1.3E-32 2.9E-37 268.5 28.9 370 84-511 4-376 (394)
39 PRK10489 enterobactin exporter 100.0 4.1E-34 8.9E-39 281.7 17.1 381 95-528 25-412 (417)
40 PLN00028 nitrate transmembrane 100.0 1.2E-32 2.7E-37 274.0 27.0 380 86-514 35-432 (476)
41 TIGR00892 2A0113 monocarboxyla 100.0 4.1E-33 9E-38 276.0 22.5 391 85-509 17-415 (455)
42 PRK10504 putative transporter; 100.0 6.9E-32 1.5E-36 270.5 31.4 385 88-494 11-419 (471)
43 KOG0255 Synaptic vesicle trans 100.0 8.9E-32 1.9E-36 272.4 31.8 414 91-531 89-508 (521)
44 PRK15402 multidrug efflux syst 100.0 2.2E-32 4.7E-37 268.6 26.6 377 83-507 9-387 (406)
45 TIGR00894 2A0114euk Na(+)-depe 100.0 7.5E-33 1.6E-37 276.6 23.3 394 82-512 14-447 (465)
46 TIGR00895 2A0115 benzoate tran 100.0 3.9E-32 8.4E-37 267.1 26.6 383 84-487 14-397 (398)
47 PRK09874 drug efflux system pr 100.0 1.4E-31 2.9E-36 263.8 30.0 374 89-514 16-397 (408)
48 TIGR00712 glpT glycerol-3-phos 100.0 7.7E-32 1.7E-36 266.6 26.7 403 85-519 25-437 (438)
49 TIGR00881 2A0104 phosphoglycer 100.0 3.3E-32 7.1E-37 265.7 22.6 374 95-497 3-379 (379)
50 TIGR00897 2A0118 polyol permea 100.0 4.6E-31 1E-35 258.2 30.5 377 89-512 15-398 (402)
51 TIGR00711 efflux_EmrB drug res 100.0 1E-31 2.2E-36 270.9 26.2 385 88-491 3-411 (485)
52 TIGR00899 2A0120 sugar efflux 100.0 8E-31 1.7E-35 255.4 29.6 361 94-511 4-370 (375)
53 TIGR00710 efflux_Bcr_CflA drug 100.0 1E-30 2.2E-35 255.7 30.4 352 88-489 6-360 (385)
54 PRK15403 multidrug efflux syst 100.0 1.9E-30 4.1E-35 253.9 31.6 375 84-508 13-390 (413)
55 COG2223 NarK Nitrate/nitrite t 100.0 1.6E-31 3.5E-36 243.4 22.3 384 85-517 12-403 (417)
56 TIGR00900 2A0121 H+ Antiporter 100.0 7.7E-32 1.7E-36 261.7 21.5 353 92-492 4-365 (365)
57 PRK11043 putative transporter; 100.0 1.9E-30 4.2E-35 254.5 30.6 353 89-494 8-361 (401)
58 PRK10133 L-fucose transporter; 100.0 2.2E-30 4.8E-35 254.5 30.2 370 85-508 24-426 (438)
59 PRK10473 multidrug efflux syst 100.0 2.1E-30 4.5E-35 253.4 29.4 353 91-502 7-361 (392)
60 cd06174 MFS The Major Facilita 100.0 4.4E-30 9.6E-35 248.0 29.5 345 91-512 3-349 (352)
61 PF07690 MFS_1: Major Facilita 100.0 1.5E-30 3.3E-35 251.2 22.6 348 93-481 2-352 (352)
62 PRK10054 putative transporter; 100.0 1.4E-29 3E-34 246.4 28.9 370 89-512 9-381 (395)
63 TIGR00883 2A0106 metabolite-pr 100.0 1.5E-29 3.3E-34 248.3 29.3 361 97-502 3-388 (394)
64 PRK11646 multidrug resistance 100.0 1.3E-29 2.8E-34 247.1 27.9 360 94-510 17-383 (400)
65 KOG2532 Permease of the major 100.0 1.3E-30 2.9E-35 252.2 20.3 365 114-515 65-447 (466)
66 PRK11195 lysophospholipid tran 100.0 1.7E-29 3.7E-34 245.6 28.3 371 90-514 6-379 (393)
67 TIGR00885 fucP L-fucose:H+ sym 100.0 1.9E-29 4.1E-34 245.7 28.6 357 89-501 5-398 (410)
68 PRK11010 ampG muropeptide tran 100.0 2.7E-29 5.8E-34 250.3 28.2 375 91-514 16-402 (491)
69 PRK11102 bicyclomycin/multidru 100.0 1.5E-29 3.3E-34 246.3 24.9 335 101-483 5-342 (377)
70 PRK11652 emrD multidrug resist 100.0 9.3E-29 2E-33 242.0 28.1 353 85-490 6-360 (394)
71 KOG2533 Permease of the major 100.0 5.6E-30 1.2E-34 248.1 17.3 374 86-497 44-438 (495)
72 PRK15011 sugar efflux transpor 100.0 5.3E-28 1.2E-32 235.9 31.1 362 91-512 19-388 (393)
73 TIGR00896 CynX cyanate transpo 100.0 2.2E-28 4.7E-33 235.8 27.6 333 102-493 15-351 (355)
74 TIGR00902 2A0127 phenyl propri 100.0 3.3E-28 7.2E-33 236.3 28.1 361 92-510 9-374 (382)
75 TIGR00886 2A0108 nitrite extru 100.0 9.2E-29 2E-33 240.0 22.7 347 90-476 4-365 (366)
76 PRK09528 lacY galactoside perm 100.0 4.5E-28 9.9E-33 238.9 27.5 381 91-517 14-405 (420)
77 TIGR00889 2A0110 nucleoside tr 100.0 7.5E-28 1.6E-32 235.5 25.3 376 92-520 7-407 (418)
78 KOG3764 Vesicular amine transp 100.0 2.7E-29 5.9E-34 225.2 10.7 345 119-513 101-452 (464)
79 PRK11128 putative 3-phenylprop 100.0 6.5E-27 1.4E-31 227.5 28.0 355 96-508 13-372 (382)
80 PRK11902 ampG muropeptide tran 100.0 5E-27 1.1E-31 229.9 27.2 367 94-511 6-386 (402)
81 TIGR00882 2A0105 oligosacchari 100.0 2.2E-26 4.7E-31 225.2 29.7 375 89-512 4-392 (396)
82 PF06609 TRI12: Fungal trichot 100.0 3.5E-26 7.6E-31 224.1 28.9 380 89-489 46-466 (599)
83 KOG2504 Monocarboxylate transp 100.0 6.4E-28 1.4E-32 236.6 16.6 401 85-511 44-472 (509)
84 COG0738 FucP Fucose permease [ 100.0 5.7E-26 1.2E-30 205.8 26.0 365 88-508 14-402 (422)
85 PRK06814 acylglycerophosphoeth 100.0 4.3E-26 9.2E-31 252.4 29.7 347 124-508 52-415 (1140)
86 PF05977 MFS_3: Transmembrane 99.9 4.4E-26 9.5E-31 224.9 25.0 374 89-512 12-391 (524)
87 PRK08633 2-acyl-glycerophospho 99.9 9.4E-26 2E-30 250.8 30.5 360 105-507 28-402 (1146)
88 TIGR00924 yjdL_sub1_fam amino 99.9 1.7E-25 3.7E-30 221.9 27.7 414 89-516 12-469 (475)
89 TIGR00806 rfc RFC reduced fola 99.9 2.4E-26 5.2E-31 215.9 18.8 372 90-482 30-407 (511)
90 TIGR00805 oat sodium-independe 99.9 1.4E-26 3.1E-31 235.6 17.9 306 89-412 35-415 (633)
91 PRK10207 dipeptide/tripeptide 99.9 1.3E-25 2.8E-30 222.6 24.1 409 88-513 15-474 (489)
92 COG2807 CynX Cyanate permease 99.9 2.8E-24 6.1E-29 191.7 28.7 368 86-511 11-381 (395)
93 TIGR00792 gph sugar (Glycoside 99.9 2.1E-25 4.5E-30 221.8 22.1 336 109-494 22-384 (437)
94 KOG2615 Permease of the major 99.9 6.4E-26 1.4E-30 202.4 16.1 334 122-490 66-414 (451)
95 TIGR00901 2A0125 AmpG-related 99.9 2.4E-25 5.2E-30 214.8 21.6 332 103-474 4-355 (356)
96 TIGR02718 sider_RhtX_FptX side 99.9 7.1E-24 1.5E-28 207.0 28.9 373 89-510 3-386 (390)
97 PTZ00207 hypothetical protein; 99.9 1.2E-23 2.7E-28 207.9 30.6 408 83-519 24-556 (591)
98 PRK09584 tppB putative tripept 99.9 5.6E-24 1.2E-28 212.3 22.3 409 89-513 23-477 (500)
99 TIGR01301 GPH_sucrose GPH fami 99.9 4E-21 8.6E-26 186.4 30.4 398 89-520 6-476 (477)
100 PF03825 Nuc_H_symport: Nucleo 99.9 8.9E-21 1.9E-25 182.0 30.2 372 94-517 9-397 (400)
101 KOG4686 Predicted sugar transp 99.9 2.9E-23 6.3E-28 177.4 11.3 390 80-511 37-439 (459)
102 KOG2563 Permease of the major 99.9 2E-20 4.4E-25 171.9 26.7 401 80-524 38-459 (480)
103 PRK15462 dipeptide/tripeptide 99.9 5.6E-20 1.2E-24 179.2 29.9 169 89-260 11-184 (493)
104 PRK09669 putative symporter Ya 99.9 1.2E-20 2.5E-25 187.3 23.4 334 109-494 32-392 (444)
105 TIGR00788 fbt folate/biopterin 99.9 5.1E-21 1.1E-25 189.5 19.2 384 89-501 28-429 (468)
106 PRK10429 melibiose:sodium symp 99.9 3.7E-20 7.9E-25 184.8 22.5 356 94-493 13-396 (473)
107 PF13347 MFS_2: MFS/sugar tran 99.8 2.7E-19 5.9E-24 176.7 25.3 337 108-494 23-388 (428)
108 PF01306 LacY_symp: LacY proto 99.8 9.8E-20 2.1E-24 171.0 19.1 383 89-520 9-405 (412)
109 PRK09848 glucuronide transport 99.8 1.2E-18 2.5E-23 173.4 26.0 348 95-493 16-391 (448)
110 KOG2325 Predicted transporter/ 99.8 2.2E-19 4.7E-24 170.5 15.0 398 83-514 30-474 (488)
111 PRK11462 putative transporter; 99.8 4.7E-18 1E-22 168.3 25.0 333 109-493 32-390 (460)
112 PF11700 ATG22: Vacuole efflux 99.8 2.4E-17 5.3E-22 161.3 29.3 362 124-520 70-472 (477)
113 TIGR01272 gluP glucose/galacto 99.8 2.9E-18 6.2E-23 160.3 19.1 277 172-501 5-301 (310)
114 COG2211 MelB Na+/melibiose sym 99.8 1.1E-17 2.3E-22 158.8 21.1 334 111-493 37-399 (467)
115 COG3104 PTR2 Dipeptide/tripept 99.8 6.3E-17 1.4E-21 152.0 24.4 416 89-515 23-487 (498)
116 COG2270 Permeases of the major 99.8 3.1E-16 6.7E-21 144.0 24.6 353 122-520 56-433 (438)
117 KOG3626 Organic anion transpor 99.8 6.1E-17 1.3E-21 160.2 19.8 309 87-412 97-477 (735)
118 PF03137 OATP: Organic Anion T 99.7 3.2E-19 6.9E-24 177.0 -0.1 391 89-491 5-515 (539)
119 PRK10642 proline/glycine betai 99.7 8.3E-17 1.8E-21 161.6 13.3 181 107-289 270-459 (490)
120 PF03209 PUCC: PUCC protein; 99.7 4.6E-14 1E-18 130.4 25.9 330 112-490 5-363 (403)
121 TIGR00880 2_A_01_02 Multidrug 99.6 2.4E-15 5.1E-20 124.0 9.3 134 130-264 4-137 (141)
122 KOG2816 Predicted transporter 99.6 1.4E-13 3E-18 133.3 17.1 362 87-490 22-392 (463)
123 PRK15011 sugar efflux transpor 99.5 1.6E-13 3.5E-18 134.0 16.4 155 108-266 237-392 (393)
124 TIGR01299 synapt_SV2 synaptic 99.5 7.9E-14 1.7E-18 143.1 14.5 140 127-268 598-737 (742)
125 PRK09528 lacY galactoside perm 99.5 4.9E-14 1.1E-18 139.2 12.4 145 122-267 260-406 (420)
126 TIGR00889 2A0110 nucleoside tr 99.5 2.1E-14 4.6E-19 140.8 8.3 160 108-267 229-405 (418)
127 PRK11551 putative 3-hydroxyphe 99.5 1.7E-13 3.6E-18 134.9 14.4 158 108-267 241-398 (406)
128 TIGR00890 2A0111 Oxalate/Forma 99.5 7.2E-14 1.6E-18 136.2 10.6 148 108-258 226-375 (377)
129 cd06174 MFS The Major Facilita 99.5 3.3E-13 7.1E-18 130.1 14.3 168 94-264 182-351 (352)
130 PRK05122 major facilitator sup 99.5 3.4E-13 7.3E-18 132.4 13.7 156 107-267 236-391 (399)
131 PRK12382 putative transporter; 99.5 4.4E-13 9.6E-18 131.2 12.8 153 106-263 235-387 (392)
132 TIGR00902 2A0127 phenyl propri 99.5 6.9E-13 1.5E-17 129.1 13.7 162 95-261 213-375 (382)
133 PRK09874 drug efflux system pr 99.5 5.6E-13 1.2E-17 131.4 12.9 158 105-263 237-396 (408)
134 TIGR00892 2A0113 monocarboxyla 99.4 5.2E-13 1.1E-17 132.7 12.0 163 95-259 249-415 (455)
135 TIGR00899 2A0120 sugar efflux 99.4 1.4E-12 3.1E-17 126.9 14.9 150 112-265 225-374 (375)
136 PF01770 Folate_carrier: Reduc 99.4 1.4E-11 3E-16 115.6 18.1 368 89-478 7-390 (412)
137 PF05631 DUF791: Protein of un 99.4 1.1E-11 2.5E-16 112.8 16.5 246 104-392 51-304 (354)
138 PF03092 BT1: BT1 family; Int 99.4 2.4E-12 5.2E-17 125.9 12.6 357 108-492 11-382 (433)
139 PRK10054 putative transporter; 99.4 1E-11 2.2E-16 121.3 15.6 162 341-517 22-184 (395)
140 PRK09556 uhpT sugar phosphate 99.4 6E-12 1.3E-16 125.9 14.4 172 89-263 260-447 (467)
141 TIGR00893 2A0114 d-galactonate 99.4 5.6E-12 1.2E-16 123.8 14.0 169 90-261 218-395 (399)
142 TIGR00883 2A0106 metabolite-pr 99.4 2.7E-12 5.8E-17 125.9 11.2 158 96-255 228-391 (394)
143 PRK03699 putative transporter; 99.4 7.6E-12 1.6E-16 122.4 14.2 166 97-266 215-381 (394)
144 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1.4E-11 3E-16 121.0 14.9 179 326-519 8-193 (412)
145 PRK03893 putative sialic acid 99.4 3.5E-12 7.6E-17 129.1 11.0 147 106-255 294-443 (496)
146 PRK03633 putative MFS family t 99.3 8.7E-12 1.9E-16 121.4 13.0 151 108-264 221-371 (381)
147 PRK11663 regulatory protein Uh 99.3 1.2E-11 2.5E-16 122.6 13.9 161 342-517 39-200 (434)
148 TIGR00891 2A0112 putative sial 99.3 9.2E-12 2E-16 122.7 13.0 136 112-249 264-400 (405)
149 COG2271 UhpC Sugar phosphate p 99.3 8.1E-12 1.8E-16 115.1 11.4 163 341-518 44-209 (448)
150 PRK10489 enterobactin exporter 99.3 8.5E-12 1.8E-16 123.2 12.4 158 107-267 243-402 (417)
151 PRK03545 putative arabinose tr 99.3 2.2E-11 4.9E-16 119.0 15.1 150 110-264 229-379 (390)
152 TIGR00895 2A0115 benzoate tran 99.3 1.6E-11 3.4E-16 120.7 13.9 163 341-518 32-195 (398)
153 TIGR00897 2A0118 polyol permea 99.3 2.8E-11 6E-16 118.7 15.0 163 97-264 232-400 (402)
154 PRK11128 putative 3-phenylprop 99.3 2.1E-11 4.6E-16 118.7 13.9 150 106-260 224-374 (382)
155 COG2814 AraJ Arabinose efflux 99.3 3.9E-11 8.4E-16 112.1 14.8 161 341-516 28-189 (394)
156 TIGR00710 efflux_Bcr_CflA drug 99.3 2.4E-11 5.2E-16 118.8 14.1 164 342-520 21-185 (385)
157 PRK10077 xylE D-xylose transpo 99.3 4.7E-11 1E-15 120.4 16.3 159 106-267 290-460 (479)
158 PRK09705 cynX putative cyanate 99.3 2.7E-11 5.8E-16 118.3 13.9 164 101-268 219-385 (393)
159 TIGR00879 SP MFS transporter, 99.3 1.5E-11 3.2E-16 124.1 12.2 178 87-267 284-473 (481)
160 PRK10213 nepI ribonucleoside t 99.3 4.8E-11 1E-15 116.4 14.9 158 347-518 41-198 (394)
161 PLN00028 nitrate transmembrane 99.3 1.3E-10 2.9E-15 116.2 18.0 159 342-515 52-219 (476)
162 PRK09952 shikimate transporter 99.3 4.6E-11 1E-15 118.3 13.3 154 112-267 276-435 (438)
163 PF05977 MFS_3: Transmembrane 99.3 2.6E-11 5.6E-16 120.5 11.1 158 101-261 232-390 (524)
164 TIGR00881 2A0104 phosphoglycer 99.3 4.2E-11 9.1E-16 116.8 12.1 162 342-518 11-174 (379)
165 PRK10473 multidrug efflux syst 99.3 6.9E-11 1.5E-15 115.7 13.4 172 333-519 10-182 (392)
166 PRK15462 dipeptide/tripeptide 99.3 2.5E-10 5.3E-15 112.1 17.0 156 341-510 24-184 (493)
167 TIGR00882 2A0105 oligosacchari 99.2 9.5E-11 2.1E-15 114.8 13.8 139 122-261 252-391 (396)
168 TIGR00903 2A0129 major facilit 99.2 9.6E-11 2.1E-15 112.6 13.2 163 342-519 7-169 (368)
169 PRK11646 multidrug resistance 99.2 2.3E-10 5E-15 111.9 15.6 156 346-517 30-187 (400)
170 TIGR00711 efflux_EmrB drug res 99.2 4.6E-11 1E-15 120.7 10.6 166 338-518 14-180 (485)
171 PF06813 Nodulin-like: Nodulin 99.2 6E-10 1.3E-14 98.5 16.1 176 86-267 2-184 (250)
172 PRK10091 MFS transport protein 99.2 1.4E-10 3E-15 113.0 13.3 162 343-519 20-182 (382)
173 KOG2504 Monocarboxylate transp 99.2 8.9E-11 1.9E-15 116.1 11.9 176 88-265 299-476 (509)
174 PRK12307 putative sialic acid 99.2 1.6E-10 3.5E-15 114.5 13.9 137 107-246 251-389 (426)
175 PF11700 ATG22: Vacuole efflux 99.2 2.4E-10 5.2E-15 112.4 14.7 179 87-267 281-470 (477)
176 TIGR00900 2A0121 H+ Antiporter 99.2 2.9E-11 6.3E-16 117.3 8.2 130 108-239 232-363 (365)
177 PRK10504 putative transporter; 99.2 2.3E-10 5E-15 115.0 14.9 165 338-517 22-187 (471)
178 TIGR00924 yjdL_sub1_fam amino 99.2 5.9E-10 1.3E-14 111.2 17.3 155 341-510 25-187 (475)
179 PRK15402 multidrug efflux syst 99.2 2.7E-10 5.8E-15 112.1 14.5 163 342-519 29-192 (406)
180 PRK14995 methyl viologen resis 99.2 2.9E-10 6.2E-15 114.5 15.0 175 328-518 8-185 (495)
181 TIGR00886 2A0108 nitrite extru 99.2 4.1E-10 9E-15 109.2 15.6 163 341-517 16-190 (366)
182 PRK11652 emrD multidrug resist 99.2 3.4E-10 7.3E-15 110.9 14.8 160 345-519 27-187 (394)
183 PRK15403 multidrug efflux syst 99.2 3.6E-10 7.7E-15 111.0 15.0 157 349-519 39-195 (413)
184 PRK11273 glpT sn-glycerol-3-ph 99.2 2.8E-10 6.2E-15 113.4 14.4 157 105-264 271-434 (452)
185 PRK11010 ampG muropeptide tran 99.2 1.1E-09 2.4E-14 109.8 18.6 155 110-267 246-405 (491)
186 TIGR00712 glpT glycerol-3-phos 99.2 1.3E-10 2.9E-15 115.2 11.8 162 345-518 46-209 (438)
187 PF07690 MFS_1: Major Facilita 99.2 7.2E-11 1.6E-15 113.8 9.1 160 342-516 12-173 (352)
188 PRK10207 dipeptide/tripeptide 99.1 1.5E-09 3.2E-14 108.3 17.2 151 341-505 29-184 (489)
189 TIGR02718 sider_RhtX_FptX side 99.1 5.1E-10 1.1E-14 109.4 13.4 149 109-260 230-386 (390)
190 PRK15034 nitrate/nitrite trans 99.1 2.5E-09 5.4E-14 103.9 17.4 182 326-517 34-234 (462)
191 KOG3762 Predicted transporter 99.1 5.5E-10 1.2E-14 105.9 12.2 153 345-511 390-543 (618)
192 TIGR00887 2A0109 phosphate:H+ 99.1 9.1E-10 2E-14 111.3 14.8 161 108-268 309-492 (502)
193 PRK11102 bicyclomycin/multidru 99.1 4E-10 8.7E-15 109.8 11.8 158 346-518 11-169 (377)
194 PRK15075 citrate-proton sympor 99.1 1.3E-09 2.9E-14 108.0 15.6 136 104-241 255-396 (434)
195 PRK11043 putative transporter; 99.1 1.8E-09 3.9E-14 106.1 16.2 152 349-515 29-181 (401)
196 COG2223 NarK Nitrate/nitrite t 99.1 1.3E-09 2.8E-14 100.9 13.9 172 332-516 20-194 (417)
197 TIGR00898 2A0119 cation transp 99.1 2.9E-10 6.3E-15 115.3 10.4 138 128-268 359-498 (505)
198 COG2270 Permeases of the major 99.1 9.5E-10 2.1E-14 101.8 12.5 177 88-267 255-431 (438)
199 KOG1330 Sugar transporter/spin 99.1 9.8E-11 2.1E-15 109.2 5.6 167 343-525 50-219 (493)
200 TIGR01272 gluP glucose/galacto 99.1 1.5E-09 3.3E-14 101.7 13.7 160 88-253 141-303 (310)
201 PRK11195 lysophospholipid tran 99.1 2.5E-09 5.3E-14 104.4 15.0 153 347-518 24-176 (393)
202 PRK10406 alpha-ketoglutarate t 99.1 2.5E-09 5.5E-14 105.9 15.1 156 108-266 264-425 (432)
203 TIGR00792 gph sugar (Glycoside 99.1 1.7E-09 3.8E-14 107.6 13.9 118 122-239 255-380 (437)
204 TIGR00896 CynX cyanate transpo 99.1 6.8E-10 1.5E-14 107.1 10.6 136 106-244 216-353 (355)
205 PRK09584 tppB putative tripept 99.1 2.7E-09 5.8E-14 107.1 15.1 154 341-508 36-194 (500)
206 KOG3098 Uncharacterized conser 99.0 8.8E-08 1.9E-12 91.9 23.0 106 130-236 56-161 (461)
207 TIGR00880 2_A_01_02 Multidrug 99.0 1.6E-09 3.5E-14 88.9 10.0 125 383-517 15-140 (141)
208 KOG0637 Sucrose transporter an 99.0 2.4E-09 5.3E-14 99.7 11.9 147 89-237 34-203 (498)
209 PF06963 FPN1: Ferroportin1 (F 99.0 2.1E-07 4.5E-12 89.6 25.5 378 89-483 4-411 (432)
210 KOG0569 Permease of the major 99.0 6.5E-09 1.4E-13 100.6 14.6 161 104-268 287-458 (485)
211 TIGR00894 2A0114euk Na(+)-depe 99.0 3.2E-09 6.9E-14 106.5 13.2 174 89-265 263-450 (465)
212 PRK08633 2-acyl-glycerophospho 99.0 3.1E-09 6.7E-14 119.1 14.3 143 111-256 257-401 (1146)
213 PF03825 Nuc_H_symport: Nucleo 99.0 1E-08 2.2E-13 99.1 15.7 171 91-263 211-393 (400)
214 KOG4686 Predicted sugar transp 99.0 6.8E-09 1.5E-13 90.2 12.6 178 81-264 261-442 (459)
215 PRK06814 acylglycerophosphoeth 99.0 2.8E-09 6.1E-14 119.0 13.1 148 108-257 246-414 (1140)
216 TIGR00885 fucP L-fucose:H+ sym 99.0 6.2E-09 1.4E-13 101.9 13.7 158 342-511 19-203 (410)
217 KOG2615 Permease of the major 99.0 3.3E-09 7.2E-14 96.3 10.5 110 363-489 72-181 (451)
218 TIGR01301 GPH_sucrose GPH fami 99.0 1.8E-08 3.8E-13 98.7 16.1 189 325-519 4-222 (477)
219 TIGR00926 2A1704 Peptide:H+ sy 99.0 5E-08 1.1E-12 99.5 19.8 152 108-262 9-179 (654)
220 PRK11902 ampG muropeptide tran 99.0 7.9E-09 1.7E-13 101.5 13.6 147 111-264 234-389 (402)
221 TIGR00901 2A0125 AmpG-related 98.9 1.4E-08 3E-13 98.1 14.0 162 344-518 6-181 (356)
222 PF06609 TRI12: Fungal trichot 98.9 5.4E-09 1.2E-13 103.9 11.1 153 346-515 64-217 (599)
223 COG0477 ProP Permeases of the 98.9 1.4E-08 3E-13 96.1 13.9 161 94-257 9-177 (338)
224 KOG3574 Acetyl-CoA transporter 98.9 1.1E-07 2.3E-12 86.4 17.4 355 87-492 31-433 (510)
225 KOG0253 Synaptic vesicle trans 98.9 4E-09 8.6E-14 95.2 7.3 132 134-268 391-522 (528)
226 PRK09848 glucuronide transport 98.9 8.2E-09 1.8E-13 102.9 10.2 121 115-237 257-386 (448)
227 PF13347 MFS_2: MFS/sugar tran 98.9 1.4E-08 3.1E-13 100.5 11.5 146 89-237 227-382 (428)
228 PTZ00207 hypothetical protein; 98.9 1.1E-07 2.4E-12 95.3 17.6 164 342-517 43-207 (591)
229 TIGR00805 oat sodium-independe 98.9 1.4E-08 3.1E-13 104.3 11.4 176 331-511 38-277 (633)
230 PF01306 LacY_symp: LacY proto 98.9 5.6E-09 1.2E-13 98.9 7.6 142 122-264 257-399 (412)
231 KOG3764 Vesicular amine transp 98.9 4E-09 8.6E-14 96.5 6.1 148 362-522 106-254 (464)
232 TIGR00769 AAA ADP/ATP carrier 98.8 6.3E-06 1.4E-10 80.5 28.4 145 89-237 9-189 (472)
233 TIGR00806 rfc RFC reduced fola 98.8 7.1E-08 1.5E-12 92.3 14.4 158 343-516 43-203 (511)
234 PRK10133 L-fucose transporter; 98.8 3.1E-08 6.6E-13 98.0 12.5 141 114-259 287-427 (438)
235 COG3104 PTR2 Dipeptide/tripept 98.8 5.1E-08 1.1E-12 92.7 10.5 124 383-514 78-205 (498)
236 PF02487 CLN3: CLN3 protein; 98.7 9.2E-07 2E-11 83.6 18.2 135 127-267 62-197 (402)
237 COG2807 CynX Cyanate permease 98.7 2.6E-07 5.7E-12 84.0 13.4 157 104-263 225-383 (395)
238 PRK10429 melibiose:sodium symp 98.7 6.4E-08 1.4E-12 97.0 10.4 116 122-237 264-391 (473)
239 PF06779 DUF1228: Protein of u 98.7 8.3E-08 1.8E-12 68.2 7.0 80 99-180 4-83 (85)
240 PRK09669 putative symporter Ya 98.7 3.9E-07 8.4E-12 90.8 13.8 114 125-238 265-387 (444)
241 KOG3762 Predicted transporter 98.6 3.8E-08 8.3E-13 93.7 5.7 164 97-263 381-545 (618)
242 KOG2532 Permease of the major 98.6 4.2E-07 9.1E-12 89.1 12.9 142 363-516 74-217 (466)
243 KOG3810 Micronutrient transpor 98.5 3.8E-07 8.3E-12 81.9 8.8 357 130-511 48-417 (433)
244 KOG4332 Predicted sugar transp 98.5 6.8E-07 1.5E-11 77.3 9.7 100 104-206 54-154 (454)
245 PF06813 Nodulin-like: Nodulin 98.5 2.1E-06 4.5E-11 76.3 12.6 143 338-490 14-157 (250)
246 TIGR00788 fbt folate/biopterin 98.5 3.1E-07 6.7E-12 91.5 8.3 150 115-266 281-447 (468)
247 KOG0255 Synaptic vesicle trans 98.5 5E-07 1.1E-11 92.0 9.7 123 383-518 135-257 (521)
248 KOG2533 Permease of the major 98.5 1E-06 2.3E-11 86.6 10.9 129 383-520 98-232 (495)
249 KOG2816 Predicted transporter 98.5 1.9E-06 4.2E-11 84.1 12.1 128 383-522 79-206 (463)
250 PF13000 Acatn: Acetyl-coenzym 98.4 1.1E-05 2.3E-10 77.0 15.9 144 90-237 3-178 (544)
251 COG2211 MelB Na+/melibiose sym 98.4 2.2E-06 4.7E-11 82.5 11.5 145 91-236 240-393 (467)
252 PF05978 UNC-93: Ion channel r 98.4 7.3E-06 1.6E-10 67.0 12.5 108 128-236 41-148 (156)
253 KOG0252 Inorganic phosphate tr 98.4 4.1E-07 8.8E-12 85.2 5.4 178 87-268 304-501 (538)
254 KOG2325 Predicted transporter/ 98.4 1.1E-06 2.5E-11 84.6 8.6 151 361-520 70-234 (488)
255 KOG0254 Predicted transporter 98.4 2.5E-06 5.4E-11 86.5 11.3 138 365-518 92-232 (513)
256 PF00083 Sugar_tr: Sugar (and 98.4 8.7E-09 1.9E-13 103.0 -6.7 158 106-268 272-440 (451)
257 PRK11462 putative transporter; 98.3 1.3E-05 2.7E-10 80.0 15.0 114 123-236 262-384 (460)
258 COG0738 FucP Fucose permease [ 98.3 6E-06 1.3E-10 76.6 11.2 166 87-258 236-402 (422)
259 KOG1237 H+/oligopeptide sympor 98.3 4.7E-05 1E-09 76.6 17.7 156 104-262 55-242 (571)
260 PF03209 PUCC: PUCC protein; 98.3 2.9E-05 6.2E-10 72.8 14.5 149 111-261 233-394 (403)
261 PF12832 MFS_1_like: MFS_1 lik 98.2 7.6E-06 1.6E-10 58.0 6.5 70 93-164 6-75 (77)
262 PF00854 PTR2: POT family; In 98.0 6.3E-05 1.4E-09 72.9 12.8 108 155-263 2-121 (372)
263 KOG1479 Nucleoside transporter 98.0 0.0011 2.4E-08 62.5 19.5 167 97-268 28-207 (406)
264 PF03219 TLC: TLC ATP/ADP tran 98.0 0.0018 3.9E-08 63.9 21.6 149 86-238 23-205 (491)
265 COG3202 ATP/ADP translocase [E 98.0 0.0032 7E-08 60.5 22.1 173 87-263 27-243 (509)
266 PF05631 DUF791: Protein of un 98.0 0.00033 7.1E-09 64.8 14.9 159 348-520 56-221 (354)
267 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00025 5.5E-09 72.9 15.3 129 383-513 40-180 (654)
268 TIGR00939 2a57 Equilibrative N 97.8 0.0011 2.4E-08 65.0 15.8 49 436-484 379-428 (437)
269 PF03092 BT1: BT1 family; Int 97.6 0.00077 1.7E-08 66.5 12.1 157 350-518 14-178 (433)
270 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0024 5.1E-08 56.2 11.8 55 209-264 2-61 (267)
271 PF02487 CLN3: CLN3 protein; 97.4 0.00046 1E-08 65.6 7.1 141 89-236 249-394 (402)
272 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0015 3.2E-08 46.3 6.9 64 337-405 11-74 (77)
273 KOG2563 Permease of the major 97.1 0.0061 1.3E-07 58.0 11.6 117 363-491 83-203 (480)
274 PRK03612 spermidine synthase; 97.1 0.013 2.7E-07 59.1 14.8 135 115-252 43-185 (521)
275 PF05978 UNC-93: Ion channel r 97.1 0.014 2.9E-07 48.0 11.6 95 383-487 54-148 (156)
276 PF06963 FPN1: Ferroportin1 (F 97.0 0.018 3.9E-07 56.0 14.0 149 89-239 260-418 (432)
277 KOG3098 Uncharacterized conser 96.5 0.16 3.6E-06 49.6 15.9 105 130-235 285-410 (461)
278 TIGR00769 AAA ADP/ATP carrier 96.4 0.063 1.4E-06 53.0 13.1 106 383-489 61-190 (472)
279 PF00854 PTR2: POT family; In 96.1 0.019 4.1E-07 55.7 7.8 117 397-514 2-122 (372)
280 PF01733 Nucleoside_tran: Nucl 95.9 0.0018 3.8E-08 60.8 -0.4 52 433-484 252-304 (309)
281 PF03137 OATP: Organic Anion T 95.9 0.0023 4.9E-08 64.6 0.1 162 347-513 24-248 (539)
282 PF01770 Folate_carrier: Reduc 95.8 0.091 2E-06 50.4 10.7 123 383-516 58-182 (412)
283 KOG3626 Organic anion transpor 95.8 0.12 2.6E-06 53.2 11.9 165 348-518 119-345 (735)
284 COG0477 ProP Permeases of the 95.6 0.25 5.4E-06 46.0 13.0 143 347-501 23-171 (338)
285 PRK03612 spermidine synthase; 95.2 0.29 6.3E-06 49.5 12.2 50 462-511 143-193 (521)
286 KOG3097 Predicted membrane pro 95.1 1 2.2E-05 41.4 13.9 72 134-206 68-139 (390)
287 KOG3880 Predicted small molecu 94.6 0.04 8.7E-07 49.6 3.8 137 127-268 65-202 (409)
288 TIGR00939 2a57 Equilibrative N 93.7 0.36 7.7E-06 47.6 8.9 107 127-234 310-429 (437)
289 KOG1237 H+/oligopeptide sympor 93.1 3.6 7.9E-05 42.1 15.1 130 383-512 90-242 (571)
290 PF03219 TLC: TLC ATP/ADP tran 92.8 0.6 1.3E-05 46.5 8.9 107 383-489 76-205 (491)
291 KOG3574 Acetyl-CoA transporter 92.8 1.3 2.7E-05 41.9 10.1 136 341-484 46-189 (510)
292 KOG3880 Predicted small molecu 92.7 0.066 1.4E-06 48.3 1.9 142 89-237 253-402 (409)
293 PF01733 Nucleoside_tran: Nucl 92.4 0.045 9.8E-07 51.3 0.5 107 129-235 187-306 (309)
294 KOG0637 Sucrose transporter an 91.6 0.18 3.8E-06 48.5 3.4 132 127-258 335-489 (498)
295 PF06779 DUF1228: Protein of u 90.6 1.7 3.7E-05 31.3 6.8 67 344-415 10-76 (85)
296 KOG1479 Nucleoside transporter 90.6 5 0.00011 38.6 11.9 19 341-359 33-51 (406)
297 COG3202 ATP/ADP translocase [E 88.0 15 0.00033 36.3 13.2 109 382-490 78-210 (509)
298 KOG4332 Predicted sugar transp 87.0 9.1 0.0002 34.4 10.2 134 125-259 283-425 (454)
299 PF07672 MFS_Mycoplasma: Mycop 84.5 5.3 0.00012 35.7 7.6 101 127-228 144-254 (267)
300 COG4262 Predicted spermidine s 83.9 16 0.00034 34.3 10.4 104 100-204 20-132 (508)
301 PF06912 DUF1275: Protein of u 75.9 52 0.0011 28.7 11.2 37 128-164 50-89 (209)
302 COG5336 Uncharacterized protei 74.7 7.8 0.00017 28.9 4.5 24 128-151 46-69 (116)
303 PF02535 Zip: ZIP Zinc transpo 70.9 72 0.0016 29.9 11.7 35 176-210 259-294 (317)
304 KOG3810 Micronutrient transpor 69.7 19 0.00042 33.9 7.0 97 125-221 272-370 (433)
305 PF11947 DUF3464: Protein of u 69.6 30 0.00064 28.2 7.2 52 175-229 95-146 (153)
306 PF11947 DUF3464: Protein of u 68.9 16 0.00034 29.7 5.5 35 445-479 111-145 (153)
307 PF02990 EMP70: Endomembrane p 68.4 50 0.0011 33.7 10.4 13 315-327 251-263 (521)
308 KOG2881 Predicted membrane pro 68.2 78 0.0017 28.3 9.9 23 386-408 260-282 (294)
309 KOG2601 Iron transporter [Inor 64.8 58 0.0013 31.2 9.0 40 467-506 178-217 (503)
310 PF13000 Acatn: Acetyl-coenzym 59.8 44 0.00096 33.4 7.7 50 180-229 408-457 (544)
311 KOG2601 Iron transporter [Inor 58.7 1.7E+02 0.0037 28.3 10.8 165 90-256 30-217 (503)
312 PF11151 DUF2929: Protein of u 57.3 34 0.00073 22.5 4.6 48 219-267 8-55 (57)
313 COG5336 Uncharacterized protei 54.8 21 0.00046 26.7 3.6 34 459-492 37-70 (116)
314 COG3619 Predicted membrane pro 53.9 1.6E+02 0.0034 26.1 14.2 67 122-188 53-126 (226)
315 PRK10263 DNA translocase FtsK; 52.4 72 0.0016 36.0 8.6 19 475-493 142-160 (1355)
316 PF06027 DUF914: Eukaryotic pr 52.3 70 0.0015 30.3 7.6 19 481-499 273-291 (334)
317 COG4769 Predicted membrane pro 50.4 31 0.00068 28.2 4.2 55 132-192 81-135 (181)
318 KOG4830 Predicted sugar transp 49.0 1.2 2.6E-05 39.4 -4.1 380 73-538 3-412 (412)
319 COG4262 Predicted spermidine s 45.4 2.6E+02 0.0057 26.7 9.8 16 472-487 147-162 (508)
320 COG1230 CzcD Co/Zn/Cd efflux s 43.3 1.9E+02 0.0042 26.8 8.7 82 84-173 22-106 (296)
321 PF02632 BioY: BioY family; I 42.6 1.1E+02 0.0023 25.0 6.4 26 130-155 59-84 (148)
322 PRK15015 carbon starvation pro 39.7 4.7E+02 0.01 27.4 14.1 98 134-235 11-110 (701)
323 TIGR01667 YCCS_YHJK integral m 34.5 2.8E+02 0.0061 29.6 9.6 54 143-196 42-100 (701)
324 TIGR00844 c_cpa1 na(+)/h(+) an 34.3 6.4E+02 0.014 27.4 19.5 33 221-254 109-141 (810)
325 COG1268 BioY Uncharacterized c 33.1 1.3E+02 0.0029 25.5 5.6 24 130-153 88-111 (184)
326 PF02694 UPF0060: Uncharacteri 32.8 80 0.0017 23.8 3.7 50 125-174 55-104 (107)
327 TIGR01666 YCCS hypothetical me 32.1 3.8E+02 0.0082 28.7 10.0 51 144-194 43-98 (704)
328 PF10785 NADH-u_ox-rdase: NADH 32.1 1.4E+02 0.0031 21.6 5.0 42 136-177 30-78 (86)
329 PF07857 DUF1632: CEO family ( 31.6 2.4E+02 0.0052 25.5 7.3 23 243-265 114-136 (254)
330 PRK14229 camphor resistance pr 31.4 2E+02 0.0044 21.9 5.9 47 161-207 33-79 (108)
331 PF10183 ESSS: ESSS subunit of 30.2 56 0.0012 24.8 2.7 36 486-521 52-87 (105)
332 PRK10263 DNA translocase FtsK; 29.3 1E+02 0.0022 34.9 5.5 19 134-152 62-80 (1355)
333 PF10066 DUF2304: Uncharacteri 28.9 72 0.0016 24.6 3.2 21 474-494 43-63 (115)
334 PF14012 DUF4229: Protein of u 28.8 1.4E+02 0.0031 20.5 4.3 25 504-528 40-64 (69)
335 PF09527 ATPase_gene1: Putativ 28.6 1.7E+02 0.0036 18.9 5.4 34 132-165 8-42 (55)
336 PF06570 DUF1129: Protein of u 28.4 4E+02 0.0086 23.2 8.2 18 247-264 180-197 (206)
337 PRK10692 hypothetical protein; 27.1 1.8E+02 0.004 20.8 4.5 19 153-171 3-21 (92)
338 COG1288 Predicted membrane pro 27.0 4.4E+02 0.0095 26.0 8.5 100 160-268 141-245 (481)
339 TIGR02230 ATPase_gene1 F0F1-AT 26.7 2.6E+02 0.0056 21.0 5.6 29 384-412 61-89 (100)
340 PRK02237 hypothetical protein; 26.7 1.5E+02 0.0032 22.5 4.3 50 126-175 58-107 (109)
341 PRK11588 hypothetical protein; 26.0 7.1E+02 0.015 25.3 13.5 40 144-183 136-177 (506)
342 KOG2765 Predicted membrane pro 25.7 93 0.002 29.6 3.8 37 128-166 190-226 (416)
343 PRK11469 hypothetical protein; 25.4 3.4E+02 0.0073 23.2 7.0 76 86-170 105-181 (188)
344 PF11299 DUF3100: Protein of u 24.8 28 0.00061 30.4 0.4 50 182-232 176-225 (241)
345 PF01914 MarC: MarC family int 24.6 3.7E+02 0.0079 23.4 7.2 60 451-511 26-86 (203)
346 KOG3097 Predicted membrane pro 24.4 6.3E+02 0.014 24.1 10.8 25 383-407 75-99 (390)
347 PF05313 Pox_P21: Poxvirus P21 23.0 4.6E+02 0.01 22.1 8.6 22 457-478 110-131 (189)
348 PF12805 FUSC-like: FUSC-like 22.7 3.7E+02 0.008 24.8 7.3 39 157-195 2-41 (284)
349 COG2274 SunT ABC-type bacterio 22.5 7.9E+02 0.017 26.4 10.3 34 455-488 243-276 (709)
350 PF03606 DcuC: C4-dicarboxylat 22.0 2.1E+02 0.0045 28.8 5.9 20 247-266 5-24 (465)
351 PF04226 Transgly_assoc: Trans 21.9 2E+02 0.0043 18.1 3.7 14 479-492 6-19 (48)
352 PRK14199 camphor resistance pr 21.9 4.1E+02 0.0088 21.0 6.4 24 184-207 69-92 (128)
353 PF07456 Hpre_diP_synt_I: Hept 21.6 2.1E+02 0.0046 23.3 4.7 52 130-187 67-118 (148)
354 KOG2887 Membrane protein invol 21.3 5E+02 0.011 21.8 8.0 61 145-212 100-162 (175)
355 PF07760 DUF1616: Protein of u 21.3 3.9E+02 0.0086 24.7 7.2 57 180-237 22-78 (287)
356 PF13829 DUF4191: Domain of un 21.1 2.1E+02 0.0045 25.2 4.8 73 213-289 25-99 (224)
357 COG1422 Predicted membrane pro 21.0 5.4E+02 0.012 22.2 8.4 40 221-266 30-70 (201)
358 PRK03818 putative transporter; 20.8 7.4E+02 0.016 25.6 9.6 80 125-205 436-516 (552)
359 PF06123 CreD: Inner membrane 20.7 5.1E+02 0.011 25.7 7.9 28 383-410 308-335 (430)
360 COG0387 ChaA Ca2+/H+ antiporte 20.5 7.7E+02 0.017 23.7 8.7 44 84-129 218-261 (368)
361 PF10762 DUF2583: Protein of u 20.3 2.5E+02 0.0053 20.1 4.1 18 153-170 3-20 (89)
362 PRK11715 inner membrane protei 20.2 5.5E+02 0.012 25.5 8.0 27 383-409 314-340 (436)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-43 Score=332.50 Aligned_cols=438 Identities=32% Similarity=0.559 Sum_probs=366.0
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHH--------HHHhCCCCCch----hhHHHHHHHHHHHHHHHhhhhhhhhhhcch
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSI--------AKELGFEGNPI----LEGLVVSIFIAGAFVGSISSGSLADKLGCR 154 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 154 (539)
......+++.+-.++....+++..+.+ .+.+|...++. ..+.+.+++.+|.++|+++.|.++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 345556666677888888888876644 34455333443 457789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh---hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHH
Q 009250 155 RTFQIDTIPLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (539)
Q Consensus 155 ~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 231 (539)
..+.++.++..++.+++.++ +++.+++++|++.|+..|........++.|..|++.||....+.+.+..+|.+++..
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877764 789999999999999999999999999999999999999999999999999999977
Q ss_pred hcCC--CCCCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHh-cCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcC
Q 009250 232 LGIP--AEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCK-GGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDG 308 (539)
Q Consensus 232 ~~~~--l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (539)
++.. +.+... |++.+....+++++..+...++||+|||+.. +++.++|++.++.+++.++++++.++..++.++++
T Consensus 171 ~~l~~ilGt~~~-W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~ 249 (485)
T KOG0569|consen 171 LGLPSLLGTEDL-WPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEE 249 (485)
T ss_pred HccHHhcCCCcc-hHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhc
Confidence 7743 334444 9999999999999999999999999999988 89999999999999999877666655444443333
Q ss_pred C--CCcchhhhhhccCchhH-HHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhcccccccchh
Q 009250 309 S--DLDSQWSELLEEPHSRV-AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 309 ~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
. +.+.+++++++++..+. ..+...+....++.+.+...+|...++++.|.+.. ..+....+...++. .
T Consensus 250 ~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~-------t 322 (485)
T KOG0569|consen 250 LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLS-------T 322 (485)
T ss_pred cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH-------H
Confidence 2 36678899999987665 45566777788899999999999999999998755 56667777777777 9
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCc-cchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDE-DFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
+++.++.||+|||++++.+..++.+..+++.......... .+..+..+...+.+...++.|.+|+.+.+.+|++|++.|
T Consensus 323 ~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 323 LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence 9999999999999999999999988887777654332111 122233456777788888999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHHHHHHHhccC
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSLNAN 533 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (539)
..+.++...+..+..++-...+..+.+..|. ..|.++.+.+++..+..++.+||||+|+.+|+.++.+++
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999997 778888999999999999999999999999998887766
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.8e-43 Score=354.17 Aligned_cols=421 Identities=19% Similarity=0.220 Sum_probs=315.3
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
+..|.++++++++.+..+++...++..+|.+.+++++ +..+.+++.+++.++.+++++++|+++||+|||++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4567777888888888999999999999999999999 88889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC----
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---- 238 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---- 238 (539)
++++++++++++++++.++++|+++|++.|+..+...+++.|++|+++|++.++++.++..+|.++++.++..+..
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876543322
Q ss_pred ---------CcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcch----HHH---HHHHHH
Q 009250 239 ---------DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEI----NKA---IEEFQL 302 (539)
Q Consensus 239 ---------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~ 302 (539)
..+ ||+.+++.+++.++.+++.+++||+|+|+..+++.+++.+.++++.+.+.. +.. .+..+.
T Consensus 321 ~~~~g~~~~~~g-WR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHS-WRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhcccccccccc-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 234 999999999988888888888999999999999999999999888765421 110 001110
Q ss_pred HHHh------c-CCCC----------------cchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc---
Q 009250 303 VIKK------D-GSDL----------------DSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV--- 356 (539)
Q Consensus 303 ~~~~------~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 356 (539)
.... + .... ...++++++.+..+..+++..+++...+ .++.+..+.|.+++..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000 0134556666666666666666555444 5667777777664331
Q ss_pred ---------------------------------------CC-----C---------------h-----------------
Q 009250 357 ---------------------------------------GI-----T---------------D----------------- 360 (539)
Q Consensus 357 ---------------------------------------~~-----~---------------~----------------- 360 (539)
+. . .
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 00 0 0
Q ss_pred -------------------------------h----HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHH
Q 009250 361 -------------------------------G----ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLG 405 (539)
Q Consensus 361 -------------------------------~----~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 405 (539)
. ........+..+. .+++.+++|+++||+|||+++.++.++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~----~i~G~il~g~L~Dr~GRr~~l~~~~~l 634 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLA----VLPGNIVSALLMDKIGRLRMLAGSMVL 634 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 0 0001111122222 233399999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHH
Q 009250 406 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 485 (539)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 485 (539)
.+++.+++.+.. . ...++...++..++..+..+...++++|.+|++.|++++|+.+....+|++++|.+.+
T Consensus 635 sai~~ll~~~~~--------s-~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g 705 (742)
T TIGR01299 635 SCISCFFLSFGN--------S-ESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFG 705 (742)
T ss_pred HHHHHHHHHHHc--------c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877766532 1 1222222222233333445667788999999999999999999999999999999999
Q ss_pred HHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCC
Q 009250 486 DLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRS 522 (539)
Q Consensus 486 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (539)
.+.+. +...+|++.+++.++++++.+ ++||++++.
T Consensus 706 ~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 706 SFVGI-TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred HHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 88774 455677777777777666554 558888764
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.4e-40 Score=332.84 Aligned_cols=432 Identities=29% Similarity=0.509 Sum_probs=319.0
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHh--------CCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL--------GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (539)
..+.+++.+++.+.++++...+++..|.++++| ++ ++.+.+++.+++.++..++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 455677778889999999999999999999988 55 77888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHH
Q 009250 157 FQIDTIPLILGAIISAQA------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL 224 (539)
Q Consensus 157 l~~~~~~~~~~~~~~~~a------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 224 (539)
++.+.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999999888863 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHH
Q 009250 225 GIITSLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKA 296 (539)
Q Consensus 225 G~~~~~~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (539)
|.++++.++..+. +..+ ||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++..........
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999887765432 3445 999999998888887777778999999998888888877776666544433222
Q ss_pred HHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhc
Q 009250 297 IEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFA 374 (539)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 374 (539)
.++.....+++... .+..+. ..............+.....++...++.|.+.++.+.+.. .......++..++
T Consensus 247 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 247 LQEIKHSLDHGRKT----GGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred HHHHHHHHHHhhhh----hhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHH
Confidence 22221111111100 011111 0111111112222333333455566778888888776533 2333344444444
Q ss_pred ccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccc
Q 009250 375 GLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIP 454 (539)
Q Consensus 375 ~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (539)
+ .++.++++||+|||+.+..+.++.+++.+++....... ...........++..+++....+..+.++.
T Consensus 322 ~-------~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (479)
T PRK10077 322 F-------TVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ----APGIVALLSMLFYVAAFAMSWGPVCWVLLS 390 (479)
T ss_pred H-------HHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC----cccHHHHHHHHHHHHHHhccccchhHHHhH
Confidence 4 89999999999999999999988888877765432111 111222233344444444445577788999
Q ss_pred cccCcccccchhhHHHHHHHHHHHHHHHHHHHHH------HHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHHHHHH
Q 009250 455 ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV------ETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEM 528 (539)
Q Consensus 455 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (539)
|.+|++.|+++.|+.+.+.+++.++++.+.+.+. +..++...|++.+++++++.++.+++.+|+|+++.+|.++
T Consensus 391 e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 470 (479)
T PRK10077 391 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEA 470 (479)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 9999999999999999999999999987776544 5678888888888888888777777889999999888877
Q ss_pred HhccCCC
Q 009250 529 SLNANST 535 (539)
Q Consensus 529 ~~~~~~~ 535 (539)
+.+++.+
T Consensus 471 ~~~~~~~ 477 (479)
T PRK10077 471 LWEPETK 477 (479)
T ss_pred HHhhccc
Confidence 7655443
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.3e-40 Score=334.57 Aligned_cols=430 Identities=20% Similarity=0.233 Sum_probs=304.8
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhC---CCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELG---FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 159 (539)
+..+..+.++.++.+.++++...++...|.+.+++. .+.++.+.+++.+.+.+++.++++++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 345567788889999999999999999998877531 11245577899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc------HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhc
Q 009250 160 DTIPLILGAIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 233 (539)
+.+++.+++++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876 789999999999999999999999999999999999999999999999999988876
Q ss_pred CCCCC-----------------------CcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChh-HHHHHHHHHcC
Q 009250 234 IPAED-----------------------DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLN-DAKAVIANLWG 289 (539)
Q Consensus 234 ~~l~~-----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~ 289 (539)
..+.. ..+ ||+.|.+.++++++..+..+++||+|||+..+++.+ ++.+.+.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 54321 124 999999999988888888888999999998887764 45655555543
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc---hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhH--H-
Q 009250 290 ESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH---SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGA--L- 363 (539)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 363 (539)
.+..++. ++.++. +++.+..+.+++++++.+. .++..+......+.....++....+.|.++++.+.+... .
T Consensus 251 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~ 328 (502)
T TIGR00887 251 VKIEAEP-DEVEKA-STAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNN 328 (502)
T ss_pred cccccCc-ccccch-hccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchh
Confidence 2211110 111100 0111111235667765422 212222222222222222334455577777777764320 0
Q ss_pred -----------HHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHH
Q 009250 364 -----------ASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSIL 432 (539)
Q Consensus 364 -----------~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (539)
...+..+..+++ .++.++++||+|||+.+..+..+..++..++...... ........
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~i~g-------~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~ 396 (502)
T TIGR00887 329 AYEELYKTAVGNLIIALAGTVPG-------YWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH-----LSTHGFLA 396 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh-----cchhHHHH
Confidence 011111222223 8889999999999999888887777766655543210 01111111
Q ss_pred HHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh----------CcchhhHHHHH
Q 009250 433 GTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF----------GVAPVYAGFGG 502 (539)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~----------g~~~~~~~~~~ 502 (539)
...+....+..+..+..+.+..|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+.. ++...|.++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 476 (502)
T TIGR00887 397 IYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFAL 476 (502)
T ss_pred HHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHH
Confidence 22222223344556677788899999999999999999999999999999999998743 44557788887
Q ss_pred HHHHHHHhhheeeeCCCCCCHHHHHH
Q 009250 503 VSLLSALFAYYFIVETKGRSLEEIEM 528 (539)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (539)
+++++.++ ++++||+++++++|+++
T Consensus 477 ~~~~~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 477 FMFLGILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHH-heEeccCCCCCHHhhhC
Confidence 77777664 46779999998877643
No 5
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3.2e-39 Score=325.73 Aligned_cols=436 Identities=33% Similarity=0.614 Sum_probs=321.5
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCC------CCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE------GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (539)
++.+....++.++.++..++...+.+..+.+..+++.+ .+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 34455566667777888899999999999999999884 447899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh---hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhc
Q 009250 157 FQIDTIPLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (539)
Q Consensus 157 l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 233 (539)
+..+.++++++.+++.++ .+++.++++|+++|++.+...+...+++.|++|+++|++++++++.+..+|..+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999654 34568999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCCCCCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHH----HHHHHHh
Q 009250 234 ---IPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEE----FQLVIKK 306 (539)
Q Consensus 234 ---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 306 (539)
.......+ ||+.|++.++..++..+..+++||+|+++..+++.+++.+...+....++.+....+ .......
T Consensus 184 ~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 76666667 999999987777777777778999998887777766665555444332221111110 0111111
Q ss_pred cCCCCcchhhhhhccCc--hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhh
Q 009250 307 DGSDLDSQWSELLEEPH--SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCAL 384 (539)
Q Consensus 307 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 384 (539)
+.+..+..++++++..+ .+..++...+..+..........++.+.+.++.+.+.. ..........+.+.++ .+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~----~~ 337 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTD-HAFLVSIIVGAVNFAF----TF 337 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCch-HHHHHHHHHHHHHHHH----HH
Confidence 11111122344443322 23444444444444444455667788888888887653 3344444444433333 89
Q ss_pred hHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc--chhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 385 CASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED--FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 385 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
+.+++.||++||+.+..+.++..++.+++........... ......+....++..+++.+..+....+..|.+|++.|
T Consensus 338 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 417 (481)
T TIGR00879 338 VAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLR 417 (481)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHH
Confidence 9999999999999988887777777666653221111000 01333344444555556666667777888999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHH
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLE 524 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (539)
+++.|+.+...+++++++|.+.+.+.++.|+...|++.++++++++++.+++.+|+++++.+
T Consensus 418 ~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 418 PKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 99999999999999999999999999999999999999988888888877778888776543
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=320.51 Aligned_cols=443 Identities=35% Similarity=0.627 Sum_probs=359.3
Q ss_pred chHHHHHHHHHHHhhhhhc--ccccchhHHHHHHHhCCCC---Cc--hhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHH
Q 009250 84 PAFPHVLIASMSNFLFGYH--IGVMNGPIVSIAKELGFEG---NP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (539)
..........++.+..+++ .....+....+.++...+. +. .+.+|+.+++.++..++++++|+++|++|||+.
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3344556666777777776 5667777777777543221 22 345899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 157 FQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 157 l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
++++.+++.++.+++++++|+++++++|+++|+|.|........+++|..|++.||...+..+....+|..++..++...
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997777666
Q ss_pred CCC-cchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcC--CcchHHHHHHHHHHH-Hhc-CCCC
Q 009250 237 EDD-PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG--ESEINKAIEEFQLVI-KKD-GSDL 311 (539)
Q Consensus 237 ~~~-~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~-~~~~ 311 (539)
.+. .+ ||..+.+..+++++..+..+++||+|+|+.++++.+++++.+.++++ +.+.+.+.+...... .+. ....
T Consensus 202 ~~~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 202 SKVYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred ccCCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 543 35 99999999999999988888899999999999999999999999998 334444333333111 111 1122
Q ss_pred cchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh-HHHHHHHHHHHhcccccccchhhhHHHHh
Q 009250 312 DSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG-ALASLLVGVTNFAGLRSEKYCALCASYLM 390 (539)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~g~l~ 390 (539)
+..+.++++....++..+...+..+.++++++...+|.+.+++..+.... .....+.++..+.+ ..++.++.
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~-------t~~~~~lv 353 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLG-------TLVATYLV 353 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHH-------HHHHHHHH
Confidence 22466666655666677788888899999999999999999999988865 56666777777777 88889999
Q ss_pred hhcCCchhhHhhHHHHHHHHHHHHHHhcCCCC----ccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchh
Q 009250 391 DKEGRQKLLIGSYLGMAISMLLVVGATSLPLD----EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIM 466 (539)
Q Consensus 391 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 466 (539)
||+|||+.++.+...+.++.++++........ .....+..+...+++...+..+..++.+.+.+|.+|.+.|+.+.
T Consensus 354 d~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~ 433 (513)
T KOG0254|consen 354 DRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGA 433 (513)
T ss_pred HHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhH
Confidence 99999999999999999999888876543221 22345667777788888888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHH-hhheeeeCCCCCCHHHHHHHhccCC
Q 009250 467 GFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSAL-FAYYFIVETKGRSLEEIEMSLNANS 534 (539)
Q Consensus 467 g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (539)
++......+...+....+..+.+..+....|..+++++.+... ..+.+.||+|+++++++++.+++..
T Consensus 434 s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~ 502 (513)
T KOG0254|consen 434 SLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGI 502 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCC
Confidence 9999999998888877777766665545667777777777777 7888999999999999998776653
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=294.13 Aligned_cols=398 Identities=17% Similarity=0.153 Sum_probs=298.3
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
+.|+.++..+.+++...++.+..++...|.+.++.++ |..|.|++.+++.++|.++..+.|.++||.++|+.+..+++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 3456778899999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhc--CCCCCCc
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG--IPAEDDP 240 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~~~~ 240 (539)
+.++.+++++++++.+.+.++-+++|..+|.-.|.+...+..|++++|||+..++++++.++|..+.+++. +++..+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 7887777
Q ss_pred chhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCC-----cch
Q 009250 241 HWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDL-----DSQ 314 (539)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 314 (539)
+ ||..|++.++++++..+..++ .+|+|+-. +....++..++..+..+++++.+ ..-
T Consensus 183 ~-w~~~f~~pgiiaiival~~~~~~rd~Pqs~-----------------GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~ 244 (448)
T COG2271 183 G-WRAAFYFPGIIAIIVALILLFLLRDRPQSE-----------------GLPPIEEYRGDPLEIYEEEKENEGLTAWQIF 244 (448)
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHhCCCcccc-----------------CCCCHHHhhcCchhhhhhhccCCCccHHHHH
Confidence 7 999999999999888766654 67777411 11111111111111111111111 122
Q ss_pred hhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc-
Q 009250 315 WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE- 393 (539)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~- 393 (539)
++.+++||..|.+.+...+... .-..+..+.|.|+.+...-+...+...++...+++..| .+++||++||+
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYi----vR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G----~Ll~GwlSDklf 316 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYV----VRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPG----TLLAGWLSDKLF 316 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHH----HHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHH----HHHHHHHHHHhc
Confidence 3445677666655444443333 44556777788776665444446666677777777555 99999999996
Q ss_pred -CCchhhHhhHHHHH-HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHH-HhcccccccccccccccCcccccchhhHHH
Q 009250 394 -GRQKLLIGSYLGMA-ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFT-FAIGAGPVTGLVIPELSSNRTRGKIMGFSF 470 (539)
Q Consensus 394 -g~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 470 (539)
|||....+.+.+.. ++++.+...+ +....+...+++..+ +-.|-.-+......|..|++..|++.|+..
T Consensus 317 kgrR~p~~~i~~~~i~~~~~~~w~~~--------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~G 388 (448)
T COG2271 317 KGRRGPMALIFMLLITASLVLYWLAP--------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVG 388 (448)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCC--------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhh
Confidence 56665544333333 3333322211 122233333333333 333334444566779999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeee
Q 009250 471 SVHWV-CNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 471 ~~~~~-g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
.+.++ |.+.+....|.+.|.+||...|.+..+.++++.+++....+
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999 88889999999999999999999888888887776655443
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=287.64 Aligned_cols=373 Identities=20% Similarity=0.229 Sum_probs=292.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
..+..++.+.++.|..+....+....+|++.+|+|+ +..+.|++.|.|.+++.++.++...+.||+.||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 345568888999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
+.++++++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+..++.++|.++|.++.+..| |
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-W 166 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-W 166 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 244 RTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
|+.|++.+.++++..+..+. +| |+. ..++...+..+..+.++++
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~---------------------------------~~~~~~~~~~~~~~~l~~p 211 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSE---------------------------------ISGSLPGPLRTLLRLLRRP 211 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--Ccc---------------------------------CCCCCCcchhHHHHHhcCc
Confidence 99999999999988776654 66 210 0011111222355667777
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhH
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLI 400 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~ 400 (539)
..+..++...+.+..+ +..++|.-|.+.+..+++.. ....+.+++..++| ..++|++.|| +.|+.+.
T Consensus 212 ~v~~~l~~t~l~~~g~---F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~G-------n~~gGrl~dr-~~~~~l~ 280 (394)
T COG2814 212 GVLLGLLATFLFMTGH---FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIG-------NLLGGRLADR-GPRRALI 280 (394)
T ss_pred hHHHHHHHHHHHHcch---hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHH-------HHHHhhhccc-cchhHHH
Confidence 7776666555554433 33455555666666666544 23334445555555 9999999999 8888888
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-cccccccccccCcccccchhhHHHHHHHHHHHH
Q 009250 401 GSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 479 (539)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 479 (539)
....+..+..+.+.+.. ++........+..++..... ........+.. ++.++.+.+++....|+|..+
T Consensus 281 ~~~~l~a~~~l~l~~~~---------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 281 AALLLLALALLALTFTG---------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred HHHHHHHHHHHHHHHhc---------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHH
Confidence 88787877777766633 22222222333233333222 22223344533 456999999999999999999
Q ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheee
Q 009250 480 VGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 480 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 515 (539)
|..+.|.+.|+.|+....++.+.+.+++.++.+...
T Consensus 351 GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 351 GAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888888777664443
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.1e-37 Score=310.19 Aligned_cols=399 Identities=16% Similarity=0.163 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchh--hHH--HHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPIL--EGL--VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDT 161 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 161 (539)
++.+....++.+++++|..+++...|.+.++|+.+.++.. .+. +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3457777889999999999999999999999976434421 222 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcHHH--------HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhc
Q 009250 162 IPLILGAIISAQAHSLDE--------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (539)
Q Consensus 162 ~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 233 (539)
++++++++++++++|+++ ++++|+++|++.|+.++...+++.|++|+++|+++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 888999999999999999999999999999999999999988888888887554
Q ss_pred CCC----C----CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 009250 234 IPA----E----DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIK 305 (539)
Q Consensus 234 ~~l----~----~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (539)
..+ . ...+ ||+.|++.+++.++..++...+||+|+|...+++.++.. .+
T Consensus 175 ~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------------------~~ 231 (490)
T PRK10642 175 VLISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------------------RE 231 (490)
T ss_pred HHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------------------cc
Confidence 332 1 2456 999999988777766666667899998653321111000 00
Q ss_pred hcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhh
Q 009250 306 KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCAL 384 (539)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 384 (539)
...+..+.+++++++. ..+.........++ ....++....+.|.++++ .+.+.. ..........+... ++.+
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~-~~~~~~~~~~~~~~----~~~~ 304 (490)
T PRK10642 232 GLQDGPKVSFKEIATK-HWRSLLTCIGLVIA-TNVTYYMLLTYMPSYLSHNLHYSED-HGVLIIIAIMIGML----FVQP 304 (490)
T ss_pred cccccccCCHHHHHHH-hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHH----HHHH
Confidence 0001112245555543 22222222222222 222344555677777754 465543 23333333333332 2288
Q ss_pred hHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccc
Q 009250 385 CASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGK 464 (539)
Q Consensus 385 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 464 (539)
+.|+++||+|||+.+..+.++..+....+..... ...........++...+.+.+ ......+..|.+|++.|++
T Consensus 305 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~-~g~~~~~~~~~~p~~~Rg~ 378 (490)
T PRK10642 305 VMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN-----SNVIGLIFAGLLMLAVILNCF-TGVMASTLPAMFPTHIRYS 378 (490)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCccchH
Confidence 9999999999999887776544333222111110 001111122222222222211 2234456778999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhhheeeeCCCCC
Q 009250 465 IMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVETKGR 521 (539)
Q Consensus 465 ~~g~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (539)
+.|+.+.+..+++.++|.+.+++.+..+ +..++++..+.+++..+.. ++.||++++
T Consensus 379 ~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~~ 435 (490)
T PRK10642 379 ALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccccCC
Confidence 9998777788888999999999988765 4545554444444444433 445776543
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.9e-38 Score=319.38 Aligned_cols=391 Identities=23% Similarity=0.291 Sum_probs=289.2
Q ss_pred hhHHHHHHHhCCC-CCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009250 108 GPIVSIAKELGFE-GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (539)
Q Consensus 108 ~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (539)
+..+.+.+|||++ .++.+.+++.+++.++..++++++|+++||+|||++++++.++.+++++++++++|++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999992 117888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccccc
Q 009250 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (539)
Q Consensus 187 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (539)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+..+++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999876643 999999999998888877788999
Q ss_pred chHHHHhcCChhHHHHHHHHHcCCcchH--HHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHH
Q 009250 267 SPRWLCKGGMLNDAKAVIANLWGESEIN--KAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGING 344 (539)
Q Consensus 267 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (539)
+|+|+..+++.+++.+..++..+.+... .+........+.+.+..+..++++++++..+...+.....++... .
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~ 341 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTA----F 341 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHH----H
Confidence 9999999999988887766554322111 111111101111111123467788888877766554443333222 1
Q ss_pred HHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 345 VLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
..+..+.+....+.+. .....+.++..+++ .++.+++.||+|||+.+.++.++.+++++++.....
T Consensus 342 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~------ 407 (505)
T TIGR00898 342 SYYGLVLDLGNLGGNI-YLDLFISGLVELPA-------KLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV------ 407 (505)
T ss_pred HHHHHhccccccCCCh-HHHHHHHHHHHHHH-------HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC------
Confidence 2222333333344332 24444555555555 899999999999999999888888877766655321
Q ss_pred chhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 504 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 504 (539)
..........+...+...+..+..+.+..|.+|++.|+++.|+.+.+..+|++++|.+.+ + +..++..++.+++++.
T Consensus 408 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~ 484 (505)
T TIGR00898 408 -DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLA 484 (505)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHH
Confidence 111122222222222222234556788899999999999999999999999999999998 4 4456667777777777
Q ss_pred HHHHHhhheeeeCCCCCCHH
Q 009250 505 LLSALFAYYFIVETKGRSLE 524 (539)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~ 524 (539)
+++.++. +++||+++++++
T Consensus 485 ~~~~~~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 485 LLAGILT-LFLPETKGVPLP 503 (505)
T ss_pred HHHHHHH-HcCcCCCCCCCC
Confidence 7776654 567888877653
No 11
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5e-36 Score=296.73 Aligned_cols=376 Identities=16% Similarity=0.207 Sum_probs=270.6
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
.+++.+..+.++.+.++++.....+..|.+.+++|+ ++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 445567788888899999999999999999999999 888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
.++++++++++++++.++++|+++|++.+..++....++.|++|+++|++++++...+..+|.++++.+.+.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-W 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888888777 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
|+.|++.++..++...+....||++++..++.+ .+++ ..+...+..+..++++++++.
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~------------~~~~----------~~~~~~~~~~~~~~~~~~~~~ 229 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS------------GKGK----------HSQSAWSVFSLSMKGLFNRAQ 229 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh------------cccc----------ccccchhhhhHHHHHHHhhch
Confidence 999998655444333332234555432211000 0000 000000011124566777666
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
.+.........+. .+.....+..+.|.++++.+.+.. ..+....+..+.+.++ .++.|++.||++||+.+..+.
T Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~g----~~~~g~l~dr~~~~~~~~~~~ 303 (426)
T PRK12307 230 FPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGFDTG-VVSNLMTAAAFGTVLG----NIVWGLCADRIGLKKTFSIGL 303 (426)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhccHHHHHHHH
Confidence 6544433322222 222233345567777777766543 3444444444444333 999999999999999888777
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
++..+..+.+.... ...........+..++ ..+..+....++.|.+|++.||++.|+.+.+.++++.++|.
T Consensus 304 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 304 LMSFLFIFPLFRIP--------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred HHHHHHHHHHHHHc--------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHH
Confidence 76655544443311 1111122222222222 22333444566789999999999999999999999999999
Q ss_pred HHHHHHHHhCcchhhH
Q 009250 483 FFLDLVETFGVAPVYA 498 (539)
Q Consensus 483 ~~~~l~~~~g~~~~~~ 498 (539)
+.|.+.+..|+.....
T Consensus 376 ~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 376 AATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHHcccHHHHHH
Confidence 9999999988655433
No 12
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.5e-35 Score=261.57 Aligned_cols=417 Identities=18% Similarity=0.219 Sum_probs=320.3
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
+..|.......++...+.+......-+.|.+.+.+|. +..|..++......|..+++..+|.++|++|||+.+.+..+
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 4456667777888888887777777888999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 242 (539)
..++...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+......+.|
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g- 228 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG- 228 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-
Confidence 9999999999999999999999999999998 999999999999999999887777 9999999999999988888888
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchH---------------HHHHHHHHHHHhc
Q 009250 243 WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEIN---------------KAIEEFQLVIKKD 307 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 307 (539)
|||.......+..+.+.+.+++||+|||+..+++.++|.+.+.++.+.+..+ ++..+..+...+.
T Consensus 229 wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a 308 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSA 308 (528)
T ss_pred HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcc
Confidence 9999999998888888889999999999999999999998887775443211 1111111111122
Q ss_pred CCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcC--------------------CC--hhHHHH
Q 009250 308 GSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG--------------------IT--DGALAS 365 (539)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~--~~~~~~ 365 (539)
.++......+++..+..+..++....++...+. ++........+++... .+ ....-.
T Consensus 309 ~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdl 387 (528)
T KOG0253|consen 309 AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDL 387 (528)
T ss_pred ccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHH
Confidence 233344555666655555555555444443333 4344444433333221 00 112334
Q ss_pred HHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc
Q 009250 366 LLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA 445 (539)
Q Consensus 366 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (539)
++.....++| .++.+++.||+|||+.+...+++.++..+++.... ......+..+..-.+ ..+.
T Consensus 388 litslaefPG-------lLIt~~iverlGRKkTMal~l~~f~iflfll~~c~--------~rn~~tvllf~araf-isg~ 451 (528)
T KOG0253|consen 388 LITSLAEFPG-------LLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK--------TRNAYTVLLFTARAF-ISGA 451 (528)
T ss_pred HHHHHhhCCc-------hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc--------CcchhHHHHHHHHHH-Hhch
Confidence 5666777777 99999999999999999999988888777766532 222233333333333 3344
Q ss_pred ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCH
Q 009250 446 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSL 523 (539)
Q Consensus 446 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (539)
....+.|..|++|+..|+++.|....+..+|+++.|.++ +........+..+++++++++++...++--|+|+|..
T Consensus 452 fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 452 FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 446789999999999999999999999999999999998 5555566677888899999998888777778988753
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=7.7e-37 Score=304.66 Aligned_cols=396 Identities=13% Similarity=0.066 Sum_probs=268.3
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
.+.++.++.+++++..+++..+++..|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 45567788888888889999999999999999999 8889999999999999999999999999999999999998888
Q ss_pred HHHHHHHHh-----hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 165 ILGAIISAQ-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 165 ~~~~~~~~~-----a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
++++++.++ ++|++.++++|+++|++.+...+...+++.||+|+++||++++++..+.++|.++++++..++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 887776665 589999999999999999999999999999999999999999999999999999999887655443
Q ss_pred c--chhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcch-h
Q 009250 240 P--HWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ-W 315 (539)
Q Consensus 240 ~--~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (539)
. ++||..|.+.+++.++..+..++ .+++|+.. +..++ ++. .. +....+ +...++++...... .
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~---~~-~~~~~~-----~~~~~~~~~~~~~~~~ 251 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEI---FG-EPISEE-----DKETESTDMTKWQIFV 251 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhc---cc-Cccchh-----hhccccccCcHHHHHH
Confidence 1 23999999888887766555444 46665321 10000 000 00 000000 00000000000011 1
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
+..++++..+...+...+ ....+.....+.|.++++ .+.+.. ..+.......+.+.++ .++.|+++||++
T Consensus 252 ~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~p~yl~~~~g~s~~-~a~~~~~~~~~~~~ig----~~~~G~lsDr~g 322 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIF----LYIVRIGIDNWSPVYAFQELGFSKE-DAINTFTLFEIGALVG----SLLWGWLSDLAN 322 (467)
T ss_pred HHHHcChHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHccCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHC
Confidence 224555555443332222 222344466677877754 565543 4444444444444333 999999999999
Q ss_pred CchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCcccccchhhHHHHHH
Q 009250 395 RQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVH 473 (539)
Q Consensus 395 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 473 (539)
||+.+........++...+.... ...........+..++ ..+..........|.+|++.+|++.|+.+...
T Consensus 323 ~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g 394 (467)
T PRK09556 323 GRRALVACIALALIIFTLGVYQH--------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFA 394 (467)
T ss_pred CCchHHHHHHHHHHHHHHHHHHh--------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 98876655443333322222211 1111122122222222 12222222345669999999999999999999
Q ss_pred HH-HHHHHHHHHHHHHH------------HhCcchhhHHHHHHHHHHHHhhh
Q 009250 474 WV-CNFLVGLFFLDLVE------------TFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 474 ~~-g~~~~~~~~~~l~~------------~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
++ |++++|.+.|.+.| ..||...|.+..++.+++.++.+
T Consensus 395 ~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 395 YLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 97 77999999999999 57888889888777777665543
No 14
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.7e-42 Score=345.42 Aligned_cols=431 Identities=34% Similarity=0.577 Sum_probs=330.7
Q ss_pred HHHHHhhhhhcccccchhHHHHH--HHhCCCCC-------chhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 92 ASMSNFLFGYHIGVMNGPIVSIA--KELGFEGN-------PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
..++.+..+++...++...+... .+++.+.+ +.+.+++.+...+|..+|++++|.++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34556788888888777766554 33333222 2356899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh---cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 163 PLILGAIISAQAH---SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 163 ~~~~~~~~~~~a~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
+..+++++.++++ |++.++++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++......
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999998887665332
Q ss_pred cc--hhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhh
Q 009250 240 PH--WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSE 317 (539)
Q Consensus 240 ~~--~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (539)
.+ .||+.+++.++++++..+...++||+|+|+..++|.+++++.+++.++.+..+++.++..++.++.+ +.+..+++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 243 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQ-ESKASWRD 243 (451)
T ss_pred cccccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccccc-ccceeeee
Confidence 21 3999999999999888888889999999999999999999999887665444333333222222211 11256777
Q ss_pred hhccCc-hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCc
Q 009250 318 LLEEPH-SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQ 396 (539)
Q Consensus 318 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r 396 (539)
+++++. .++......+..+..+.+.....++.+.+++..+.+..........+..+++ .+++.++.||+|||
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~GRr 316 (451)
T PF00083_consen 244 LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLG-------TLLAIFLIDRFGRR 316 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccc
Confidence 887765 3444444555555556666677778888888777766533333444444444 77778999999999
Q ss_pred hhhHhhHHHHHHHHHHHHH-HhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHH
Q 009250 397 KLLIGSYLGMAISMLLVVG-ATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV 475 (539)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 475 (539)
++++.+..+..++.+.+.. .......+.......+....+....+..+..+..+.+..|.+|++.|+++.|+...++++
T Consensus 317 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i 396 (451)
T PF00083_consen 317 KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI 396 (451)
T ss_pred cccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 9999888888877776651 111110000112333344444445566677788888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHHHHHHHh
Q 009250 476 CNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSL 530 (539)
Q Consensus 476 g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (539)
++++++.+...+.+..+....+.+.++++++..++.++++||+|+++++|+++++
T Consensus 397 ~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 397 GGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred cccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 9999999999888887766778888888888888888999999999999998753
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=9.4e-36 Score=290.63 Aligned_cols=373 Identities=17% Similarity=0.162 Sum_probs=265.4
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
+|..++.+.++.++.........+.+|.+.+++|. ++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 45555666666566545545566678999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
+++++++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+.++|..++|++++.+.+..+ ||
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 163 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WR 163 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888777 99
Q ss_pred HHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 245 TMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
+.|++.+++.++..+..+. +||+|+ + + +......++.++++.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~----~-~--------------------------------~~~~~~~~~~~~~~~ 206 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS----E-H--------------------------------SGSLKSLPLLFRRPA 206 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC----C-C--------------------------------cchHHHHHHHHhCcH
Confidence 9999998887776554433 454431 0 0 000112345666665
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
.+.......+.... .+....+..+++.+..+.+.. ..+.......+.+.++ +++.+++.||+++|... .+.
T Consensus 207 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~g~s~~-~~~~~~~~~~~~~~~g----~~~~g~l~dr~~~~~~~-~~~ 277 (390)
T PRK03545 207 LVSLYLLTVVVVTA---HFTAYSYIEPFVQQVAGLSEN-FATLLLLLFGGAGIIG----SVLFSRLGNRHPSGFLL-IAI 277 (390)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCcc-HHHHHHHHHHHHHHHH----HHHHHHHhhccchhHHH-HHH
Confidence 55433332222221 122223333433333455433 4444444444444333 99999999999987643 344
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLF 483 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 483 (539)
.+..++...+.... .+.+.......+.+.+. ....+.....+.+..| +.++++.|+.+...++|..+||.+
T Consensus 278 ~~~~~~~~~l~~~~-------~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 278 ALLLVCLLLLLPAA-------NSEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred HHHHHHHHHHHHHh-------chHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433332211 01122222222222222 2233444456667766 468999999999999999999999
Q ss_pred HHHHHHHhCcchhhHHHHHHHHHHHHhhheee
Q 009250 484 FLDLVETFGVAPVYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 484 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 515 (539)
.|.+.++.|++..++..+.+.+++.++.+...
T Consensus 349 ~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 349 GNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998888888777665544
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.8e-36 Score=299.14 Aligned_cols=401 Identities=15% Similarity=0.121 Sum_probs=273.2
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
++..+....++.++..++...++..+|.+.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 44556667777788888888889999999999999 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
+++++++++++|++.+++.|++.|++.|...+...+++.|++|+++|++++++++.+.++|..+++.+++.+.+..+ ||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888877 99
Q ss_pred HHHHhhHHHHHHHHH-HhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh-hhhhccC
Q 009250 245 TMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW-SELLEEP 322 (539)
Q Consensus 245 ~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 322 (539)
+.|++.+++.++..+ ..++++|+|++...+...++.. +. ++...+.+.+..+.+..+ ...++++
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-----------DA---LELAQQQEGAGLSRKEILTKYVLLNP 243 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-----------cc---cccchhccccCCChhhhHHHHHhcCh
Confidence 999998887665543 3445677764321110000000 00 000000000000000111 1133444
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc--CCchhh
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE--GRQKLL 399 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~--g~r~~~ 399 (539)
..+....... ........+..+.|.+++ +.+.+.. ..+.......+.+.++ +++.|+++||+ ++|+..
T Consensus 244 ~~~~~~~~~~----~~~~~~~~~~~~~p~~l~~~~g~s~~-~a~~~~~~~~~~~~~g----~~~~g~l~dr~~~~~r~~~ 314 (434)
T PRK11663 244 YIWLLSFSYV----LVYVVRAAINDWGNLYMSETLGVDLV-TANSAVSMFELGGFIG----ALVAGWGSDKLFNGNRGPM 314 (434)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCHH-HHHHHHHHHHHHHHHH----HHHHhhhHHHhccCCccHH
Confidence 4333322222 222234445556777774 4465543 4445555555554444 99999999998 333332
Q ss_pred -HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCcccccchhhHHHHHHHHHH
Q 009250 400 -IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 400 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 477 (539)
....+...+....+..... .+..... ..++..++. .+..........|.+|++.++++.|+.+++.++|+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 386 (434)
T PRK11663 315 NLIFAAGILLSVGSLWLMPF-------ASYVMQA-ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGA 386 (434)
T ss_pred HHHHHHHHHHHHHHHHHccc-------ccHHHHH-HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHH
Confidence 2222222222222211110 1111111 122222221 11222233456799999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCC
Q 009250 478 FLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 478 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (539)
+++|.+.|.+.|..|+...|.+.+++.+++.+..+...++++
T Consensus 387 ~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 387 ALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred HHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999888888887766654444443
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.2e-35 Score=290.16 Aligned_cols=380 Identities=15% Similarity=0.142 Sum_probs=247.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCC-CCchhhHHHHHHH---HHHHHHHHhhhhhhhhhhcchHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIF---IAGAFVGSISSGSLADKLGCRRTFQI 159 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~---~~~~~~~~~~~g~l~dr~Grr~~l~~ 159 (539)
+++..+...+++.+++.+|...++...|.+.+|++.+ .+..+.+...+++ +++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4555677778889999999999999999999999631 1444444444444 44555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcHH--------HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHH
Q 009250 160 DTIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 231 (539)
+.++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|+++.++.+.+...|.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 58899999999999999999999999999999999999998888888888876
Q ss_pred hcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009250 232 LGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (539)
Q Consensus 232 ~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (539)
++..+. ...+ ||+.|++.+++.++...+....||+|++.. .
T Consensus 179 ~~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------------------------------~ 227 (432)
T PRK10406 179 VVVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQET------------------------------R 227 (432)
T ss_pred HHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHH------------------------------h
Confidence 654332 1345 999999988888776655555677653210 0
Q ss_pred HHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccch
Q 009250 304 IKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYC 382 (539)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 382 (539)
.++ ++.+++++++++..+...+. ..+.....++....+.|.++++ .+.+.. ..+....+..+.+.++
T Consensus 228 ~~~----~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~lp~~l~~~~g~s~~-~~~~~~~i~~~~~~i~---- 295 (432)
T PRK10406 228 ALK----EAGSLKGLWRNRRAFIMVLG---FTAAGSLCFYTFTTYMQKYLVNTAGMHAN-VASGIMTAALFVFMLI---- 295 (432)
T ss_pred hhc----ccccHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----
Confidence 000 11245566665443322221 1221122233445566666654 565543 3334444433333222
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.++.|+++||++||+.+....++..+....+...... .......+..............+....+.+|.+|++.|
T Consensus 296 ~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r 370 (432)
T PRK10406 296 QPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN-----VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVR 370 (432)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc-----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcc
Confidence 7888999999999987766555433332222111100 01111111111111111111223455678899999999
Q ss_pred cchhhHHHHHHHH-HHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhhh
Q 009250 463 GKIMGFSFSVHWV-CNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 463 ~~~~g~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 512 (539)
+++.|+.+.+.++ .+...|.+.+. .+..| +...++..+++.+++.+..+
T Consensus 371 ~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 371 ALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred chhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999988775 34457777774 45566 44445555555555544443
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.3e-35 Score=287.21 Aligned_cols=378 Identities=13% Similarity=0.089 Sum_probs=266.4
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
.|.....++++.+..... ...++.+|.+++|+|+ |..+.|++.+.+.+++.+++++.|+++||+|||+++..+..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~ 84 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLI 84 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHH
Confidence 344455555544443333 6778999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
+++.+++++++|++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++++.++..+||
T Consensus 85 ~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 85 AVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 9999999999999999999999999999999999999999997 779999999999999999999999988877653399
Q ss_pred HHHHhhHHHHHHHHHHhcccc-cchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 245 TMLYIASLPGFILALGMQFTV-ESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
+.+.+.++..++..+..+... +.|+ +++++ +....+.++++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~--~~~~~~~l~~~~ 206 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVA-----------------------------------SSHKT--TTTPVRVVFTPR 206 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc-----------------------------------cccCC--CcCCcccccCHh
Confidence 998776665554433332221 1110 00000 011122333443
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
.+...+.. .+ ....+.....+.|.++++.+.+.. ..+....+..+.+.++ +++.+++.||++||+....+.
T Consensus 207 ~~~l~~~~---~~-~~~~~~~~~~~lp~~l~~~g~s~~-~ag~~~~~~~i~~i~g----~~~~g~l~~r~~~~~~~~~~~ 277 (393)
T PRK09705 207 AWTLGVYF---GL-INGGYASLIAWLPAFYIEIGASAQ-YSGSLLALMTLGQAAG----ALLMPAMARHQDRRKLLMLAL 277 (393)
T ss_pred HHHHHHHH---HH-HHHHHHHHHHHHHHHHHHcCCChh-hhhHHHHHHHHHHHHH----HHHHHHHHhhccchHHHHHHH
Confidence 33322222 11 222344555677777777766543 4444444444444333 999999999999999888887
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccccc-CcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELS-SNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
.+..++..++.... ..... ....+.+.+.+. ..+.......+.. |++.+++..|+.+...++++.++|.
T Consensus 278 ~l~~~~~~~~~~~~--------~~~~~-~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~ 347 (393)
T PRK09705 278 VLQLVGFCGFIWLP--------LQLPV-LWAMVCGLGLGG-AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPW 347 (393)
T ss_pred HHHHHHHHHHHHcc--------chHHH-HHHHHHHHhccc-hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666655543311 11111 112222222222 2343444445555 4678999999999999999999999
Q ss_pred HHHHHHHHhC-cchhhHHHHHHHHHHHHhhheeeeCCCCCC
Q 009250 483 FFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVETKGRS 522 (539)
Q Consensus 483 ~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (539)
+.|++.|..| +...|.+.+.++++..+..+.+.+|+++|.
T Consensus 348 ~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 348 FSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 9999999987 666677777777776666667778877664
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=5.4e-36 Score=293.13 Aligned_cols=395 Identities=14% Similarity=0.107 Sum_probs=267.9
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
.+|+.+.++++.+++++++....+...|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 357788888899999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC-----
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED----- 238 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----- 238 (539)
++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|..+++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887653
Q ss_pred -CcchhHHHHHhhHHHHHHHHHH-hcccccchHHHHhcCChhHHHH-HHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh
Q 009250 239 -DPHWWRTMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKA-VIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (539)
Q Consensus 239 -~~~~wr~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (539)
..+ ||+.|++.++++++..++ .++++|+|+.. +...++.++ ..+..+......++ .+...+++....+..+
T Consensus 163 ~~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 236 (412)
T TIGR02332 163 ALKG-WQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLTLEQ---PEGAFAHAAMPQRSML 236 (412)
T ss_pred Cccc-hhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhccccccc---cccccccccccHHHHH
Confidence 245 999999988887766544 45578877420 000011111 11111000000000 0000000000001123
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCC-ChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGI-TDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
++++ ++..+ . ..+..+.....+..+..+.|.++++.+. .+....+.......+.+.++ .++.|+++||++
T Consensus 237 ~~~~-~~~~~---~-~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g----~l~~g~l~dr~~ 307 (412)
T TIGR02332 237 REIF-TPAIM---L-YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFG----MIWWSRHSDRLK 307 (412)
T ss_pred HHhc-ChHHH---H-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHH----HHHHHHHhcccC
Confidence 3333 22222 2 2222223333455667788888887532 22234444444444444333 999999999999
Q ss_pred Cchh-hHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHH
Q 009250 395 RQKL-LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVH 473 (539)
Q Consensus 395 ~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 473 (539)
+|+. .....+...++. ++.... . ..........+...+.. ...+.......|.+|++.|+++.|+.+...
T Consensus 308 ~r~~~~~~~~~~~~~~~-~~~~~~--~-----~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~ 378 (412)
T TIGR02332 308 ERKHHTALPYLFAAAGW-LLASAT--D-----HNLIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATG 378 (412)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHhc--C-----CHHHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhh
Confidence 7774 333333333332 221110 0 11111111111111111 112333345567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC-cchhhHHHHHHH
Q 009250 474 WVCNFLVGLFFLDLVETFG-VAPVYAGFGGVS 504 (539)
Q Consensus 474 ~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~ 504 (539)
++|++++|.+.|.+.+..| |...+++.+++.
T Consensus 379 ~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 379 NIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 9999999999999999876 887777665543
No 20
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3.1e-35 Score=289.18 Aligned_cols=381 Identities=20% Similarity=0.244 Sum_probs=274.3
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
+++|..+.+.++..++++++....++..|.+.+++|. ++.+.+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 3677788888899999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 242 (539)
+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+.+..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 167 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA- 167 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988887777
Q ss_pred hHHHHHhhHHHHHHHHHH-hcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhcc
Q 009250 243 WRTMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (539)
||+.|++.++..++..+. ..++||+|++..++.+.++. +...+..++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~ 216 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------------------------APVLRALFGE 216 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-------------------------------hhhHHHHhhh
Confidence 999999987766655543 34578876543221100000 0001111111
Q ss_pred CchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh
Q 009250 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG 401 (539)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~ 401 (539)
+..+........ .+...........+.|.+.++.+.+.. ..+.......+.+.++ .++.|++.||++||+.+..
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~g~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~~~~~~~ 290 (406)
T PRK11551 217 GRATATLLLWIS-YFFTLIVLYFLLNWLPSLLVGQGLSRS-QAGLVQIAFNIGGALG----SLLIGALMDRLRPRRVVLL 290 (406)
T ss_pred hhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCChh-hhhHHHHHHHHHHHHH----HHHHHHHHHHHhHHHHHHH
Confidence 111111111111 111122233445567788887776544 4444444444444333 9999999999999998877
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
+.+...++.+.+... .+........++......+..+...++..|.+|++.|+++.|+.+.+.+++..++|
T Consensus 291 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 361 (406)
T PRK11551 291 IYAGILASLAALAAA---------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGP 361 (406)
T ss_pred HHHHHHHHHHHHHhc---------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHh
Confidence 666555554444331 11111222222222222233455667888999999999999999999999999999
Q ss_pred HHHHHHHHHhCc-chhhHHHHHHHHHHHHhhh
Q 009250 482 LFFLDLVETFGV-APVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 482 ~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~ 512 (539)
.+.|.+.++.+. ...+.......+++.++.+
T Consensus 362 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 362 LLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999987553 3444444444444444433
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=8.5e-35 Score=286.58 Aligned_cols=388 Identities=16% Similarity=0.184 Sum_probs=269.0
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
+++|+.+..+.++.+.++++....++..|.+.+++|+ ++.+.+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4677888899999999999999999999999999999 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc-
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH- 241 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~- 241 (539)
+.++++++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhcc
Q 009250 242 WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (539)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (539)
+||+.|++.++..++..+.....||++++...+.+.++..+..++..+..... +...++.....+.. .
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--~ 233 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRI----------ANIVMTLAAAMVQS--A 233 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhh----------hhhhhhhhHHhhhh--h
Confidence 39999998777766666666667887654432222111111111111000000 00000000001110 1
Q ss_pred CchhHHH-HHHHHHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhh
Q 009250 322 PHSRVAF-IGGALFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLL 399 (539)
Q Consensus 322 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~ 399 (539)
...+... .......+.... ......+.|.++ ++.+.+.. ..+.+.....+.+.++ .++.+++.||++||+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~g----~~~~g~l~dr~g~~~~~ 307 (405)
T TIGR00891 234 GKRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGLSPH-TVANIVVFSNIGAIVG----GCVFGFLGDWLGRRKAY 307 (405)
T ss_pred hhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCchhhh
Confidence 1111111 111111111221 222333445554 44565543 4444444444444333 99999999999999988
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHH
Q 009250 400 IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 479 (539)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 479 (539)
..+.+...+....+.... ...........+......+..+....++.|.+|++.|+++.|+.+.+.++++.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 379 (405)
T TIGR00891 308 VCSLLAGQLLIIPVFAIG--------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGAL 379 (405)
T ss_pred HHHHHHHHHHHHHHHHhC--------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHH
Confidence 777665433332222210 111122222122223333444556677889999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-cchhhH
Q 009250 480 VGLFFLDLVETFG-VAPVYA 498 (539)
Q Consensus 480 ~~~~~~~l~~~~g-~~~~~~ 498 (539)
+|.+.|.+.|+.| |...+.
T Consensus 380 g~~~~g~l~~~~g~~~~~~~ 399 (405)
T TIGR00891 380 APIIGALLAQRLDEYGTALA 399 (405)
T ss_pred HHHHHHHHHHhccccchhHH
Confidence 9999999999998 665444
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5e-35 Score=279.91 Aligned_cols=354 Identities=12% Similarity=0.036 Sum_probs=247.1
Q ss_pred hhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHH
Q 009250 100 GYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDE 179 (539)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~ 179 (539)
......+++.+|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..+......+.+....++|++.
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455678899999999999 8899999999999999999999999999999998876665555554443344489999
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 259 (539)
++++|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++.++.+..+ ||+.|++.++++++..+
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHH
Confidence 99999999999986 55666677999999999999999999999999999999999988888 99999998888776655
Q ss_pred H-hcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhh
Q 009250 260 G-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQ 338 (539)
Q Consensus 260 ~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (539)
+ .+++||+|++. ++.. + . ++ ....++++++++..+...+...+...
T Consensus 160 ~~~~~lp~~p~~~---~~~~-------------~-~---~~-----------~~~~~~~ll~~~~~~~~~~~~~~~~~-- 206 (368)
T TIGR00903 160 LVLAALPALPFQA---AEGF-------------G-F---KD-----------AVKEFGALAGRKDLWIIGAILGFGVA-- 206 (368)
T ss_pred HHHHHcCCCCCCC---CCCc-------------c-h---HH-----------HHHHHHHHHcChhHHHHHHHHHHHHH--
Confidence 4 44578877531 0000 0 0 00 00135667777766555444333333
Q ss_pred hhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCc---hhhHh-hHHHHHHHHHHHH
Q 009250 339 FAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQ---KLLIG-SYLGMAISMLLVV 414 (539)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r---~~~~~-~~~~~~~~~~~~~ 414 (539)
.+..+..|.|.++++.+.+.. .+....+..+.+ .+..++++||..|| +.... ..++.++....+.
T Consensus 207 --~~~~~~~wlp~~L~~~g~s~~--~~~~~~l~~~~g-------~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~ 275 (368)
T TIGR00903 207 --LFDNLAIWLEAALRPAGLEDI--AGDAVALAILAG-------LIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALA 275 (368)
T ss_pred --HHHHHHHHHHHHHHHCCCChH--HHHHHHHHHHHH-------HHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 444566788888887776532 344455555555 45567888887653 32222 2333333222222
Q ss_pred HHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Q 009250 415 GATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVA 494 (539)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~ 494 (539)
.. .+.. ..+........+.....+..+++.+|.+|++.|+++.|+.+..++++++++|.+.+.+.. |..
T Consensus 276 ~~--------~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~ 344 (368)
T TIGR00903 276 FE--------LNRL-ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAE 344 (368)
T ss_pred Hc--------cccH-HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHH
Confidence 10 0111 112122222222222335566788999999999999999999999999999999988773 666
Q ss_pred hhhHHHHHHHHHHHHhhh
Q 009250 495 PVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~ 512 (539)
..|.++++..+++.+...
T Consensus 345 ~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 345 AYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 778888877777766653
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=8.3e-35 Score=283.83 Aligned_cols=369 Identities=18% Similarity=0.143 Sum_probs=261.2
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+....+..+..+. ....++..|.+.+++|+ ++.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.++++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~ 82 (377)
T TIGR00890 6 LVGTVIMCFTSGY-VYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGF 82 (377)
T ss_pred eHHHHHHHHHhhH-HhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHH
Confidence 3333333333333 55678889999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009250 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (539)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 248 (539)
+++++++|++.++++|++.|++.+..++.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..+ ||+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~ 160 (377)
T TIGR00890 83 TFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFI 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHH
Confidence 999999999999999999999999988888889999997 569999999999999998877666666666666 999999
Q ss_pred hhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHH
Q 009250 249 IASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (539)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (539)
+.+++.++..+..++ ++++|+. ..+.+ ++.+.++...++.++++..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~ 210 (377)
T TIGR00890 161 YMGIIFLLVIVLGAFLIGYPPGQ-LIKTN-----------------------------IEVSVKDYTVWEMLRTPQFWVL 210 (377)
T ss_pred HHHHHHHHHHHHHHHheecCchh-ccccC-----------------------------cccchhhhhHHHHHcCccHHHH
Confidence 999888877665544 4433310 00000 0000011123455566555543
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
........+ .......+.+.+.++.+.+.. ..+....+..+...++ +++.|++.||++||+.+..+.++..
T Consensus 211 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~~~~~~~~~~~~~ 281 (377)
T TIGR00890 211 YLSFFLNAV----SGLLLIGLYKPYGQSLGLSDG-FLVLAVSISSIFNGGG----RPFLGALSDKIGRQKTMSIVFGISA 281 (377)
T ss_pred HHHHHHHhH----HHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 332222221 122223344445566665543 3344444444444333 9999999999999999888887777
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 408 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
++.+.+..... ...........+...+.+ ...+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+
T Consensus 282 ~~~~~~~~~~~------~~~~~~~~~~~~~g~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 354 (377)
T TIGR00890 282 VGMAAMLFIPM------LNDVLFLATVALVFFTWG-GTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA 354 (377)
T ss_pred HHHHHHHHccc------chhHHHHHHHHHHHHHhc-cchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 77665544211 011111111222222222 22344456788999999999999999999999999999999999
Q ss_pred HHHhCcchhhHHHHHHHHHHH
Q 009250 488 VETFGVAPVYAGFGGVSLLSA 508 (539)
Q Consensus 488 ~~~~g~~~~~~~~~~~~~~~~ 508 (539)
.+..||...|.+.+++.+++.
T Consensus 355 ~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 355 LTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HhhhchhhHHHHHHHHHHHhc
Confidence 999999998888777666543
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=9.4e-34 Score=279.62 Aligned_cols=385 Identities=18% Similarity=0.132 Sum_probs=253.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHH-HHHHh--CCCCCchhhHHHH-----HHHHHHHHHHHhhhhhhhhhhcchH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVS-IAKEL--GFEGNPILEGLVV-----SIFIAGAFVGSISSGSLADKLGCRR 155 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~ 155 (539)
++++.+....++.+++.+|...++...|. +.+++ +. ++. .+++. ++.+++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV--SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 44556778888999999999998888774 55666 55 444 35553 3455667789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcHH--------HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHH
Q 009250 156 TFQIDTIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII 227 (539)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 227 (539)
++..+.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 4888999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHH
Q 009250 228 TSLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEE 299 (539)
Q Consensus 228 ~~~~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (539)
++..+...+. ...+ ||+.|++.+++.++...+....||+|+|...+++.+
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~--------------------- 233 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA--------------------- 233 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc---------------------
Confidence 8876655443 2345 999999988877665554455778775432211000
Q ss_pred HHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhH--HHHHHHHHHHhccc
Q 009250 300 FQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGA--LASLLVGVTNFAGL 376 (539)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~ 376 (539)
+.+++....+.++++++.+.... ....+..+ .......+.+.+.+ ..+.+... ....+.++..+++
T Consensus 234 -------~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~- 302 (438)
T PRK09952 234 -------AAKKRIPVIEALLRHPGAFLKII--ALRLCELL-TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLT- 302 (438)
T ss_pred -------cccccCCHHHHHHHchHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-
Confidence 00000111222344443332221 11222222 23334445555554 44555431 1222233333333
Q ss_pred ccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-ccccccccccc
Q 009250 377 RSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPE 455 (539)
Q Consensus 377 i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 455 (539)
.++.|+++||++||+.+..+.++..++...+..... .......+.......+++.+ ..+..+++..|
T Consensus 303 ------~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e 370 (438)
T PRK09952 303 ------IPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTE 370 (438)
T ss_pred ------HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999887776655444333322111 01111121212222222222 23445678899
Q ss_pred ccCcccccchhhHHHHHHH-HHHHHHHHHHHHHHHHhC--cchhhHHHHHHHHHHHHhhheeeeC
Q 009250 456 LSSNRTRGKIMGFSFSVHW-VCNFLVGLFFLDLVETFG--VAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 456 ~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
.+|++.|+++.|+.+.... +++.++|.+.+.+.+..+ |...+.+.+++.+++.+.. +..++
T Consensus 371 ~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~ 434 (438)
T PRK09952 371 MFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKD 434 (438)
T ss_pred HCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHccc
Confidence 9999999999999776655 899999999999988653 6666666666666665544 34444
No 25
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.8e-34 Score=289.01 Aligned_cols=408 Identities=14% Similarity=0.161 Sum_probs=273.6
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
++|+.+..++++.+++.++.....+.+|.+.+++|+ ++.+.+++.+.+.+++.+++++.|+++||+|||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 456678888899999999999999999999999999 888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
.+++.+++++++|++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-W 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888888 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHH-HHH---HHHHhcCCCCcchhh---
Q 009250 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIE-EFQ---LVIKKDGSDLDSQWS--- 316 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~--- 316 (539)
|+.|++.++..++..+....+||++++..++++.++..+..+.....+....... ... .............+.
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAV 253 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH
Confidence 9999886655554444445567766543322221111111111100000000000 000 000000000000000
Q ss_pred ----------h--hhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchh
Q 009250 317 ----------E--LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 317 ----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
. .......+..........+..+........+.|.+++ +.+.+.. ..+.+.....+.+.++ .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~-~~g~~~~~~~~~~~~g----~ 328 (496)
T PRK03893 254 LGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPH-TVANVLFFSGFGAAVG----C 328 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHH-HHHHHHHHHHHHHHHH----H
Confidence 0 0000011111111111111111111223456677774 6666544 4555555555554434 9
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccc
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRG 463 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 463 (539)
++.|++.||++||+.+..+..+..+..+.+.... ...........+...+.+.+..+....++.|.+|++.|+
T Consensus 329 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (496)
T PRK03893 329 CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG-------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRA 401 (496)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc-------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhh
Confidence 9999999999999988777655554443332211 011112222222222333344455556788999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Q 009250 464 KIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLL 506 (539)
Q Consensus 464 ~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 506 (539)
+++|+.+....+|+.++|.+.|.+.+..|+...+...++.+.+
T Consensus 402 ~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 402 AGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777655544433
No 26
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=5.7e-34 Score=285.52 Aligned_cols=388 Identities=11% Similarity=-0.011 Sum_probs=273.1
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
++|..+..++++.++..++.++++..+|.+.+|+|. +..+.+|+.+.|.+++.++++++|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 456789999999999999999999999999999998 888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC-CCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 242 (539)
+.++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.++.+
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 9999999999999999999999999999999998888887776 67899999999999999999999999999999888
Q ss_pred hHHHHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHH---------HHHc---CCcchHHHHHH---------H
Q 009250 243 WRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVI---------ANLW---GESEINKAIEE---------F 300 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~---------~ 300 (539)
|||.|++...+.++..++. +++|++++. ++.+.+...... .... ........... .
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG 237 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 9999999887777665544 446665421 111111111100 0000 00000000000 0
Q ss_pred HHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhccccccc
Q 009250 301 QLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEK 380 (539)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 380 (539)
.....+.+...+....++++++.+....+....... ......++.|.+++.....+....+.......+...++
T Consensus 238 ~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~-- 311 (495)
T PRK14995 238 LFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMI----TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFS-- 311 (495)
T ss_pred HHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH--
Confidence 000011111112222456676655443333322222 33345567777777654444445555555554444333
Q ss_pred chhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcc
Q 009250 381 YCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNR 460 (539)
Q Consensus 381 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 460 (539)
.++.|++.||+|+|+.+..+.++..++..++..... ....+.......+.+.+.+.. .+.......+..|++
T Consensus 312 --~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~l~G~g~g~~-~~~~~~~~~~~~~~~ 383 (495)
T PRK14995 312 --GPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF-----STQQWQAWGLMALLGFSAASA-LLASTSAIMAAAPPE 383 (495)
T ss_pred --HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHhHHHH-HHHHHHHHHhcCCHH
Confidence 899999999999999888888777776665544211 011222222333333333322 233445566788999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009250 461 TRGKIMGFSFSVHWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 461 ~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~ 490 (539)
+++.+.++.++..++|+.+|+.+.|.+.++
T Consensus 384 ~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 384 KAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998764
No 27
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=277.75 Aligned_cols=361 Identities=15% Similarity=0.160 Sum_probs=233.1
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHH-HHHH-----HHHHHHHHhhhhhhhhhhcchHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLV-VSIF-----IAGAFVGSISSGSLADKLGCRRTFQ 158 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~-----~~~~~~~~~~~g~l~dr~Grr~~l~ 158 (539)
|++....++++.+++.+|...++...|.+.+|++. ++.+.+.+ .+.. .++..+++++.|+++||+|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP--AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 44468888999999999999999999999999998 55444333 3322 2233478999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcHHH--------HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHH
Q 009250 159 IDTIPLILGAIISAQAHSLDE--------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL 230 (539)
Q Consensus 159 ~~~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 230 (539)
.+.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874 688999999999999999999999999999999999999888888877777
Q ss_pred HhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHH
Q 009250 231 FLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQL 302 (539)
Q Consensus 231 ~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (539)
.+++.+. +..+ ||+.|++.++...+........||++++..+
T Consensus 171 ~~g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~----------------------------- 220 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLAR----------------------------- 220 (434)
T ss_pred HHHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHh-----------------------------
Confidence 6666542 3456 9999998654432222221222332211000
Q ss_pred HHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccc
Q 009250 303 VIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKY 381 (539)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~ 381 (539)
+++.+.+..++...+++ ..........+.....+.....+.|.++++ .+.+.. .......+..+.+.++
T Consensus 221 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~-~~~~~~~~~~~~~~~~--- 290 (434)
T PRK15075 221 ---KHRPSMREIFRSLAANW---RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAA-DSLLVTLCVGVSNFIW--- 290 (434)
T ss_pred ---hhccccccHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH---
Confidence 00000111122222221 222221222222333455667778888776 466543 3333333333333222
Q ss_pred hhhhHHHHhhhcCCchhhHhhHHHHHHHHHH-HHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcc
Q 009250 382 CALCASYLMDKEGRQKLLIGSYLGMAISMLL-VVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNR 460 (539)
Q Consensus 382 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 460 (539)
.++.|+++||++||+.+..+..+..+.... +..... ............+...+++ ...+....+..|.+|++
T Consensus 291 -~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~ 363 (434)
T PRK15075 291 -LPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA-----APSFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAE 363 (434)
T ss_pred -HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc-----CCchHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCC
Confidence 899999999999999877665443322211 111111 0011111111122222222 22333446778999999
Q ss_pred cccchhhHHHHHHHH-HHHHHHHHHHHHHHHhCcc
Q 009250 461 TRGKIMGFSFSVHWV-CNFLVGLFFLDLVETFGVA 494 (539)
Q Consensus 461 ~~~~~~g~~~~~~~~-g~~~~~~~~~~l~~~~g~~ 494 (539)
.|+++.|+.+.+... ++.++|.+.|.+.|..|+.
T Consensus 364 ~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 364 VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 999999997666654 5888999999999998864
No 28
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.4e-34 Score=277.85 Aligned_cols=364 Identities=20% Similarity=0.204 Sum_probs=259.1
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
+.+..+++..++..++..+..+.+|. +.+++|. ++.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 34666777888888888888999986 6788999 88899999999999999999999999999999999999999998
Q ss_pred HHHHHHHhh--------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 166 LGAIISAQA--------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 166 ~~~~~~~~a--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
++.++++++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 887776654 256788999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhh
Q 009250 238 DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSE 317 (539)
Q Consensus 238 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (539)
+..+ ||+.+++.++..++..+.....|++++ .+ +++.++++
T Consensus 173 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------------------------~~~~~~~~ 213 (399)
T PRK05122 173 HWGG-LAGLGLLIMLLALLGLLLARPRPAVPP-----VK---------------------------------GERLPFRR 213 (399)
T ss_pred Hccc-HHHHHHHHHHHHHHHHHHHhcCCCCCC-----CC---------------------------------ccchhHHH
Confidence 8888 999998877665554443332333210 00 00001111
Q ss_pred hhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCch
Q 009250 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQK 397 (539)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~ 397 (539)
.++. .+.......+..+ .+.....+.+.+..+.+............+..+++ .++.+++.||+++|+
T Consensus 214 ~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 214 VLGR--VWPYGMGLALASI----GFGTIATFITLYYAARGWDGAALALTLFGVAFVGA-------RLLFGNLINRLGGLR 280 (399)
T ss_pred HHHH--HHHHHHHHHHHHH----HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHH-------HHHHHHHHHHhccHH
Confidence 1111 1111111111111 22233345555555555433322223334444444 899999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHH
Q 009250 398 LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 477 (539)
.+..+..+..++..++.... +.+.......+.+.+.+ ...+.......|..|++.|+++.|+.+...++|.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 281 VAIVSLLVEILGLLLLWLAP--------SPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 88887777777665554411 12222222222222222 2234444556688899999999999999999999
Q ss_pred HHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhe
Q 009250 478 FLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYY 513 (539)
Q Consensus 478 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 513 (539)
.+++.+.|.+.+..|++..+++.+++.+++.++.+.
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888777777665543
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=280.33 Aligned_cols=397 Identities=15% Similarity=0.130 Sum_probs=253.9
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
+|..+....+......++...+....|.+.++ |+ +..+.+++.+++.+++.+++++.|+++||+|||++++.+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34445555566666666666677788988888 88 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHH-HHHHhcCCCCCC
Q 009250 165 ILGAIISAQAH----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII-TSLFLGIPAEDD 239 (539)
Q Consensus 165 ~~~~~~~~~a~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~l~~~ 239 (539)
+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999988764 7888999999999999988888888999999999999999999999998864 455543333233
Q ss_pred cchhHHHHHhhHHHHHHHHH-HhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh-hh
Q 009250 240 PHWWRTMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW-SE 317 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (539)
.+ ||+.|++.+++.++..+ ..++++|+|+....+. .++..+ +.++ +. ...++++.+.++.+ +.
T Consensus 184 ~g-w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~---------~~~~---~~-~~~~~~~~~~~~~~~~~ 248 (452)
T PRK11273 184 ND-WHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYKN---------DYPD---DY-NEKHEQELTAKQIFMQY 248 (452)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhhh---------cccc---cc-ccccCCCccHHHHHHHH
Confidence 35 99999998887776544 4455777764311100 000000 0000 00 00000000001111 22
Q ss_pred hhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc--C
Q 009250 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE--G 394 (539)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~--g 394 (539)
.++++..+...+...+... .......+.|.++++. +.+.. ..+....+..+.+.++ .++.|+++||+ +
T Consensus 249 ~~~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~-~~~~~~~~~~~~~~~g----~~~~G~l~dr~~~~ 319 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYL----LRYGILDWSPTYLKEVKHFALD-KSSWAYFLYEYAGIPG----TLLCGWMSDKVFRG 319 (452)
T ss_pred HHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHccC
Confidence 4455554443333322222 2334556778877764 55533 3333333333333333 89999999999 4
Q ss_pred CchhhH-hhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccCcccccchhhHHHHH
Q 009250 395 RQKLLI-GSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSV 472 (539)
Q Consensus 395 ~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 472 (539)
||.... ....+..++.+.+.... ..+.... ...++..+... +.......+..|.+|++.+|++.|+.+..
T Consensus 320 r~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 391 (452)
T PRK11273 320 NRGATGVFFMTLVTIATIVYWLNP-------AGNPTVD-MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 391 (452)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhc-------ccChHHH-HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHH
Confidence 444322 22222222222221111 0111111 11122222211 11222234566999999999999999999
Q ss_pred HHHHHHH-HHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeee
Q 009250 473 HWVCNFL-VGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 473 ~~~g~~~-~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
.++|+.+ +|.+.|.+.|..||...|++.+++++++.+....+.+
T Consensus 392 ~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 392 GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred HHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998765 7999999999999999999888887777666554433
No 30
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.7e-34 Score=282.43 Aligned_cols=390 Identities=17% Similarity=0.116 Sum_probs=268.7
Q ss_pred HhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh
Q 009250 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (539)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 175 (539)
+++..++...++...|.+.+++|+ ++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 345567778888899999999999 888999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009250 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (539)
Q Consensus 176 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (539)
|++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.+++.+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888878 9999999888877
Q ss_pred HHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHH
Q 009250 256 ILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALF 334 (539)
Q Consensus 256 ~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (539)
+..+..++ .+|+|+. +...++..+.... +.. ..+...+++.+..+...++.++++..+...+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQK---AKWLTEEEKYIVV-------GGL--LAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLV 227 (399)
T ss_pred HHHHHhhheecCCCCc---cccCCHHHHhhcc-------hhh--ccccccccccCCCccchHHHhcCHHHHHHHHHHHHH
Confidence 76655544 5554421 1100110000000 000 000000111122233455666665544433322222
Q ss_pred HHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh-hHHHHHHHHHH
Q 009250 335 LLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG-SYLGMAISMLL 412 (539)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~ 412 (539)
.........+.|.++++ .+.+.. ..+.......+.+.++ .++.+++.||++||+.... ......++.+.
T Consensus 228 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 228 ----NIGLGFFLTWFPTYLVQERGLSIL-EAGFMASLPGIVGFIG----MILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred ----HhHHHHHHHHHHHHHHHHhcccHH-HhhHHHHHHHHHHHHH----HHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 22344555566666654 444432 4444444444444333 9999999999999862111 11111111111
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009250 413 VVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 492 (539)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g 492 (539)
........ ................++..+..+....+..|..|++.|+++.|+.+.+.++|..++|.+.|.+.+..|
T Consensus 299 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 299 LSLLMFAT---NYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHHHHHHh---ccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 11100000 001112222222233333344567778889999999999999999999999999999999999999988
Q ss_pred -cchhhHHHHHHHHHHHHhhh
Q 009250 493 -VAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 493 -~~~~~~~~~~~~~~~~~~~~ 512 (539)
+...+.+.+++.+++.++.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 376 SFAGALMVVAALALIGALSYL 396 (399)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 88888888777777665543
No 31
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.6e-33 Score=266.53 Aligned_cols=376 Identities=15% Similarity=0.059 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHH-HhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
++.+.+..++.++......+.+++.+.+.+ |+|+ ++.|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 456777788888888888999999998876 8999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC--
Q 009250 165 ILGAIISAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-- 237 (539)
Q Consensus 165 ~~~~~~~~~a-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-- 237 (539)
++.+++++++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999987 8999999999999998 6799999999999999999999999997677777665544443211
Q ss_pred ----------------CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHH
Q 009250 238 ----------------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQ 301 (539)
Q Consensus 238 ----------------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (539)
+..+ ||.++++..++.++..++.++..++++
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~-~~~~~~~~~~~~iv~~i~~~~~~~~~~-------------------------------- 236 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMS-LANAAWIWVPLLAIATIAAWSGMNDIA-------------------------------- 236 (462)
T ss_pred HHHHHhccccccccccchHH-HHHHHHHHHHHHHHHHHHHHHhCCCcc--------------------------------
Confidence 1223 899998888888777766665544321
Q ss_pred HHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccc
Q 009250 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKY 381 (539)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 381 (539)
+.+.......+.+|++..|...+.+.+ .+..+..+.++.|++.++.. +.. .......+..+++.+
T Consensus 237 -----~~~~~~~~~~~vlk~~~~Wllslly~~----tFG~fvg~s~~lp~~~~~~~-~~~-~~l~~~~l~~l~~~l---- 301 (462)
T PRK15034 237 -----SSRASIADQLPVLQRLHLWLLSLLYLA----TFGSFIGFSAGFAMLAKTQF-PDV-NILRLAFFGPFIGAI---- 301 (462)
T ss_pred -----ccccCHHHHHHHhCCCchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHc-ChH-HHHHHHHHHHHHHHH----
Confidence 011112345567777776665554433 34466667777777776633 221 111111222233322
Q ss_pred hhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHH--HHHhcccccccccccccccCc
Q 009250 382 CALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYI--FTFAIGAGPVTGLVIPELSSN 459 (539)
Q Consensus 382 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~ 459 (539)
.++++|+++||+|+++++.++++.+.+....+.... +... ..........++. ...+.+.. ..+-++.+.+|+
T Consensus 302 ~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~l--p~~~--~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~ 376 (462)
T PRK15034 302 ARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTL--PGTG--SGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQ 376 (462)
T ss_pred HHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cccc--ccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhh
Confidence 289999999999999999988877766654433322 1111 1122222222222 23333333 344566666664
Q ss_pred ---------------------ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhhheeeeC
Q 009250 460 ---------------------RTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 460 ---------------------~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
++.|.+.|+...++.+|+++.|.++|...+..| +...|+.+.+..+++.++.++.+.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 377 ITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred hhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 157889999999999999999999999988877 6667888888888877777665543
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=3.7e-33 Score=271.21 Aligned_cols=371 Identities=11% Similarity=0.110 Sum_probs=258.9
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.+..+++..+..+.......+.+|.+++|+|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 35667778888888888899999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
.+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++++++.+.+..+ ||+.|
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f 160 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTF 160 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777 99999
Q ss_pred HhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhH
Q 009250 248 YIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (539)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (539)
++.+++.++..+.. .++||.++ +.+. +.+..+ +.++++..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~----~~~~--------------------------------~~~~~~-~~~~~~~~~~ 203 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD----EAKG--------------------------------GLREQF-HFLRSPAPWL 203 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----cccc--------------------------------CHHHHH-HHhcChHHHH
Confidence 99888777665443 34565431 0000 000011 1233333332
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHH
Q 009250 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGM 406 (539)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 406 (539)
..... .......+....+..+++.+..+.+.. ..+.......+...++ .++.+++.||+++|+.+..+..+.
T Consensus 204 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~ig----~~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 204 IFAAT---MFGNAGVFAWFSYIKPYMMFISGFSET-SMTFIMMLVGLGMVLG----NLLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----hHHHheeccccCchhHHHHHHHHH
Confidence 22211 111111122233334444444565543 4445444444444333 999999999999999888887777
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHH
Q 009250 407 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD 486 (539)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 486 (539)
+++.+++..... ..+......++...+......+.......+..+++.++.+ ..+...++|.+++|.+.|.
T Consensus 276 ~i~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~ 346 (382)
T PRK10091 276 VLALLMLFFFGG-------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGM 346 (382)
T ss_pred HHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHH
Confidence 766655433211 1222222222222222221222222333444444444443 4467788999999999999
Q ss_pred HHHH-hCcchhhHHHHHHHHHHHHhhheee
Q 009250 487 LVET-FGVAPVYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 487 l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 515 (539)
+.|. .+|...+.+.+++..+.......+.
T Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 347 MLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9996 5788888877666666555443333
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=9.8e-33 Score=268.45 Aligned_cols=368 Identities=15% Similarity=0.117 Sum_probs=256.4
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
+.|+.+..+.+..+..........+.+|.+.+++|+ ++.+.++..+++.++..+++++.|+++||+|||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 345555666666555555555666678999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
.+++.+++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w 173 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-W 173 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998888 9
Q ss_pred HHHHHhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 244 RTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
|+.|++.+++.++..+... ..||+|+. +++.....++.++++
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~-------------------------------------~~~~~~~~~~~l~~~ 216 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGE-------------------------------------PSHQKQNTFRLLQRP 216 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCcc-------------------------------------cccchhHHHHHhcCH
Confidence 9999998877766554433 24554310 000011233455555
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhh
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGS 402 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~ 402 (539)
..+...+...+.... .+....+..|.+.++.+.+.. ..+.......+.+.++ .++.+++.||.+ |+.+..+
T Consensus 217 ~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~g~s~~-~~g~~~~~~~~~~iig----~~~~~~l~~r~~-~~~l~~~ 287 (394)
T PRK10213 217 GVMAGMIAIFMSFAG---QFAFFTYIRPVYMNLAGFGVD-GLTLVLLSFGIASFVG----TSLSSFILKRSV-KLALAGA 287 (394)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCChh-HHHHHHHHHHHHHHHH----HHHHHHHHhccc-hhHHHHH
Confidence 554433322222221 122233445777777776654 3344444433333333 889999999954 4433333
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHH
Q 009250 403 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
..+..+..+.+.... ...+.......+. +++.+. .+...+++.+..|+ .++.+.++.....++|..+||
T Consensus 288 ~~~~~~~~~~l~~~~-------~~~~~~~~~~~l~--G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~ 357 (394)
T PRK10213 288 PLVLAVSALVLTLWG-------SDKIVATGVAIIW--GLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGA 357 (394)
T ss_pred HHHHHHHHHHHHHHh-------hhHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 333333322222211 0222222222222 333222 34444456677764 467888888888899999999
Q ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHh
Q 009250 482 LFFLDLVETFGVAPVYAGFGGVSLLSALF 510 (539)
Q Consensus 482 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 510 (539)
.+.|.+.|..|+...+...+.+.++..+.
T Consensus 358 ~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 358 AIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 99999999999888777766665555443
No 34
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.3e-32 Score=269.08 Aligned_cols=363 Identities=16% Similarity=0.135 Sum_probs=253.9
Q ss_pred HHHHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
+..+.++.++..+...+..|.+|. +.+|+|. |..+.|++.+++.+++.++++++|+++||+|||+++..+.++..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 445555666667777788888885 6789999 8999999999999999999999999999999999999998887776
Q ss_pred HHHHH---h-----hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 168 AIISA---Q-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 168 ~~~~~---~-----a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
.+.+. + .++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++++++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55332 2 357899999999999999999999999999999999999999999999999999999999988887
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhh
Q 009250 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (539)
.+ ||+.+++..+..++........||.++ + + +.+.+.++..
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------------------~---~~~~~~~~~~ 215 (392)
T PRK12382 175 FG-FAALALTTMVLPLLAWAFNGTVRKVPA----H-------------------------------A---GERPSLWSVV 215 (392)
T ss_pred cC-hHHHHHHHHHHHHHHHHHHHhccCCCC----C-------------------------------c---ccCchHHHHH
Confidence 77 999877665554433332222232210 0 0 0000111111
Q ss_pred ccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhh
Q 009250 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLL 399 (539)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~ 399 (539)
+. .+...+...+.. ........+.+.++++.+...........++..+.+ .++.|++.||+++|+.+
T Consensus 216 ~~--~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 216 GL--IWKPGLGLALQG----VGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLM-------RVLFGWMPDRFGGVKVA 282 (392)
T ss_pred HH--HHHhHHHHHHHH----HHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-------HHHHHHHHHhcCCCeeh
Confidence 10 011011111111 122234445566666666544323222333333333 89999999999999988
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHH
Q 009250 400 IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 479 (539)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 479 (539)
..+..+..++.+++.... +.+.......+...+.+ ...+.......+..|+++||++.|+.+...++|..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 283 IVSLLVETVGLLLLWLAP--------TAWVALAGAALTGAGCS-LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV 353 (392)
T ss_pred HHHHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 888877777766554411 12222222222222222 123445566678889999999999999999999999
Q ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 480 VGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 480 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+|.+.|.+.++.||+..|.+.+++.+++.++.+..
T Consensus 354 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 354 SGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999888887777665443
No 35
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=263.75 Aligned_cols=439 Identities=21% Similarity=0.246 Sum_probs=308.0
Q ss_pred CCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHh-CCC-----CCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchH
Q 009250 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL-GFE-----GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR 155 (539)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 155 (539)
.++..+.+.+..++.+.++++...++.+.+.+...+ |-+ ..+...+.+..+..+|..+||+++|+++||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 356677888999999999999999999999888765 322 34556688999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-------cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHH
Q 009250 156 TFQIDTIPLILGAIISAQAH-------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (539)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 228 (539)
++...++++.+++++++++. =..++...|++.|+|.|+-+|...++.+|...+++||...+.+.+..++|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999888762 25678889999999999999999999999999999999999998888888887
Q ss_pred HHHhcCCCC--------C-----C-cchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcC-ChhHHHHHHHHHcCCcch
Q 009250 229 SLFLGIPAE--------D-----D-PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGG-MLNDAKAVIANLWGESEI 293 (539)
Q Consensus 229 ~~~~~~~l~--------~-----~-~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 293 (539)
|.+++..+. . + .+-||..|.+.+++.++.....+.+||+++|..... +.+.+. .+..+....
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~~~ 272 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVLSV 272 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcccccccc
Confidence 776664332 1 1 112999999999999999998999999998863322 212221 111111111
Q ss_pred HHHHHHHHHHHHhcCCCCcch---hhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHH----H
Q 009250 294 NKAIEEFQLVIKKDGSDLDSQ---WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALAS----L 366 (539)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 366 (539)
+-+ +.+ ......+.++.. +...+..+.-+. ++.....++..-..++....+...+++..+........ .
T Consensus 273 ~~~--~~~-~~~~~~~~~~~~~~~F~~~f~~~hg~~-Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~ 348 (538)
T KOG0252|consen 273 DIE--AES-TAESDVPPPSNSFGLFSRLFLRWHGKH-LLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFK 348 (538)
T ss_pred ccc--hhh-ccccCCCCcccccchHHHHHHHHHHHH-HHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHH
Confidence 000 000 001111111112 222222222223 33333333333334556666777788766654321111 0
Q ss_pred HHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc
Q 009250 367 LVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG 446 (539)
Q Consensus 367 ~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (539)
.--...++...+.+.+..+...++|++||+++.+.++.++.+..+.+...+.. ........+...+..+....|-.
T Consensus 349 vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~----~~~~~Gf~v~y~l~~ff~NFGPn 424 (538)
T KOG0252|consen 349 VAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ----LENTIGFVVLYSLTFFFGNFGPN 424 (538)
T ss_pred HHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc----ccccCceeehHHHHHHHHhcCCC
Confidence 11111112222222337888899999999999999999999888877663321 11122222333333344445566
Q ss_pred cccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH-----HhCcchhhHHHHHHHHHHHHhhheeeeCCCCC
Q 009250 447 PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE-----TFGVAPVYAGFGGVSLLSALFAYYFIVETKGR 521 (539)
Q Consensus 447 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (539)
.....+.+|.+|.+.|++..|+....+-.|++++...+.++.+ ..|.+..+++++++.+++.++. +++||+++|
T Consensus 425 ~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~ 503 (538)
T KOG0252|consen 425 ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGK 503 (538)
T ss_pred ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeeccccc
Confidence 6777888999999999999999999999999999999999999 7889999999999988887765 667799999
Q ss_pred CHHHHHHHhcc
Q 009250 522 SLEEIEMSLNA 532 (539)
Q Consensus 522 ~~~~~~~~~~~ 532 (539)
++++++.+.+.
T Consensus 504 ~leei~~e~~~ 514 (538)
T KOG0252|consen 504 SLEEISNEEES 514 (538)
T ss_pred CHHHhcChhhc
Confidence 99988655443
No 36
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-35 Score=266.36 Aligned_cols=379 Identities=16% Similarity=0.137 Sum_probs=258.7
Q ss_pred CCCCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH
Q 009250 80 LGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 159 (539)
..+...++.+.++++.+.++.++...+....+.+++.||+ ++...|++.+.+.+.+.+++|++|+++|||.||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni--~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI--SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC--CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 3445566779999999999999999999999999999999 77777999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 160 DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
|..+|.++.++++++..||+++++|.+.|+|.+...+++..+++|.+|..+|++++++++.+..+|..+|.+++..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhh
Q 009250 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (539)
.++|||.|++.++++++..++.+++.++|+ ++..++... +.. .........++.+.+.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~----rga~~~~~~-------~~~-----------~~~~~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPE----RGARDEVDG-------ENK-----------MVKPFTSVWKDLKVLA 241 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcc----ccccccccc-------CCc-----------CCCCccchHHHHHHHH
Confidence 888999999999999999887766555452 110000000 000 0001111112223333
Q ss_pred ccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh----cCC
Q 009250 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK----EGR 395 (539)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr----~g~ 395 (539)
+++......+.+....+...+.-++...+.++..+-.+.+. .......++....+.+| .+.+|.++|| +.+
T Consensus 242 ~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~-~~~~ifg~vt~~~G~lG----vl~Ggiisd~~~~~~~~ 316 (493)
T KOG1330|consen 242 KIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDH-NATLIFGGVTCAGGSLG----VLFGGIISDKLSRIFPN 316 (493)
T ss_pred ccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCcc-ccchhhhhHHHhhchhh----heehHHHHHHHHHhccc
Confidence 43444333333333333222222333333333333333322 24445566666666666 5666666666 333
Q ss_pred chhhHh----hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHH
Q 009250 396 QKLLIG----SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFS 471 (539)
Q Consensus 396 r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 471 (539)
-..... +......+..++...+... .......+.+++++............-+..|++|++.|.++.++...
T Consensus 317 ~~~~~~~q~~~~~g~~~s~~~L~~~~~~~----~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~ 392 (493)
T KOG1330|consen 317 SGTLRASQLSAALGAPLSIPFLFLFPAFT----SSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTV 392 (493)
T ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHH
Confidence 122221 1111222222222221111 12222222233333333333334455667799999999999999998
Q ss_pred HHHHHHHH-HHHHHHHHHHHh
Q 009250 472 VHWVCNFL-VGLFFLDLVETF 491 (539)
Q Consensus 472 ~~~~g~~~-~~~~~~~l~~~~ 491 (539)
+..+.+-. +|.+.|.+.|+.
T Consensus 393 ~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 393 FEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHhccCCCcceehhHHHHh
Confidence 88765555 555999998864
No 37
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=6.6e-32 Score=262.51 Aligned_cols=362 Identities=15% Similarity=0.137 Sum_probs=259.6
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.++.+.++.++..+......+.+|.+.+++|. +..++|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36677788888999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
.+++++++|++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+... |...+
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 163 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVLPW 163 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chHHH
Confidence 99999999999999999999999999999988888899999999999999999999999999999998876532 32222
Q ss_pred HhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHH
Q 009250 248 YIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (539)
..+........+. +.+.+++ + ++ +++..+.++.++++..+..
T Consensus 164 -~~~~~~~~~~~~~-~~~~~~~----~-------------------------------~~-~~~~~~~~~~~~~~~~~~~ 205 (381)
T PRK03633 164 -VTGLVLAAILPLL-FTRILNQ----Q-------------------------------AE-NHDSTSIWPMLKLRQARLG 205 (381)
T ss_pred -HHHHHHHHHHHHH-HhcccCC----C-------------------------------CC-CCCCCCHHHHHHhcchHHH
Confidence 2222221111111 1111110 0 00 0011233445566554433
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
......... .+.....+.|.+.++.+.+.. ..+.......+...++ ++..|++.||+++|+.+..+.....
T Consensus 206 ~~~~~~~~~----~~~~~~~~lp~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~dr~~~~~~l~~~~~~~~ 276 (381)
T PRK03633 206 VNGCIISGI----VLGSLYGLMPLYLNHQGMSDA-SIGFWMALLVSAGILG----QWPIGRLADRFGRLLVLRVQVFVVI 276 (381)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HhhhHHHHHHcCcHHHHHHHHHHHH
Confidence 222212111 223344567778777766544 4444444444444333 8999999999999998887777666
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 408 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
++.+.+.. . ........+.+.+ .....|.......|..|+++++...+..+...++|.+++|.+.|.+
T Consensus 277 ~~~~~~~~----------~-~~~~~~~~l~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l 344 (381)
T PRK03633 277 LGSIAMLS----------Q-AAMAPALFILGAA-GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAML 344 (381)
T ss_pred HHHHHHhh----------h-HHHHHHHHHHHHH-HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543321 1 1111122222221 2234566667777888888788888888888899999999999999
Q ss_pred HHHhCcchhhHHHHHHHHHHHHhh
Q 009250 488 VETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 488 ~~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
.|+.|+...|.+.+++.++..+..
T Consensus 345 ~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 345 MQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHH
Confidence 999999998888877777665543
No 38
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.3e-32 Score=268.51 Aligned_cols=370 Identities=15% Similarity=0.065 Sum_probs=262.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
.+++..+..++..++.+......++.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345667777888888889889999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC-Ccch
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DPHW 242 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~~ 242 (539)
.+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.. ..+
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g- 160 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE- 160 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 999999999999999999999999999999999999999999999999999999988899999999988877654 455
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 243 WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
||+.|++.+++.++..++.++ .+.|+. ++.+ + +++++ ..+..+ ++
T Consensus 161 w~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~---------------~------------~~~~~----~~~~~~-~~ 205 (394)
T PRK03699 161 WYWVYACIGLVYVAIFILTLF-SEFPAL--GKHA---------------P------------KADKP----VAKEKW-GI 205 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCccc--cccC---------------c------------cccCc----cccccC-Ch
Confidence 999999988877666544433 222210 0000 0 00000 000001 11
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG 401 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~ 401 (539)
.. +... +..+........+..+.|.++++ .+.+.. ..+...+...+...++ +++.+++.||+++|+.+..
T Consensus 206 ~~---~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~~~~~~~~~~~~~ig----~~~~g~l~dr~~~~~~l~~ 276 (394)
T PRK03699 206 GV---LFLA-IAALLYILAQLTFISWVPEYAQKKFGMSLE-DAGNLVSNFWMAYMVG----MWIFSFIVRFFDLQRILTV 276 (394)
T ss_pred HH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCChH-HhhHHHHHHHHHHHHH----HHHHHHHHHHhchhhHHHH
Confidence 11 1111 11122222334455677777754 465543 4444444444444333 9999999999999998877
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCcccccchhhHHHHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLV 480 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 480 (539)
...+..+...++.... +....... .+..++. .+..+...++..+..|.+ ++...+......++|..++
T Consensus 277 ~~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~ 345 (394)
T PRK03699 277 LAGLALVLMYLFVNTD--------DPSHLLYA--ILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLT 345 (394)
T ss_pred HHHHHHHHHHHHHHcC--------CchHHHHH--HHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHH
Confidence 6665555444433211 11111122 2222222 223344445556666544 6778899999999999999
Q ss_pred HHHHHHHHHHhCcchhhHHHHHHHHHHHHhh
Q 009250 481 GLFFLDLVETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 481 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
|.+.|.+.+..|++..+++.+++.+++.+.+
T Consensus 346 p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 346 FVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 9999999999999998888887777775543
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=4.1e-34 Score=281.70 Aligned_cols=381 Identities=14% Similarity=0.088 Sum_probs=274.3
Q ss_pred HHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHh-
Q 009250 95 SNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ- 173 (539)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~- 173 (539)
..++..+......+.+|.+.++++. ++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 3455556667777888999999887 8889999999999999999999999999999999999988888877766542
Q ss_pred ----hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 174 ----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 174 ----a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
.++++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..+|+.+++.+.+..+ |++.|++
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~ 181 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGL 181 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHH
Confidence 56889999999999999998889999999999999999999999999999999999999998887777 9999999
Q ss_pred hHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH
Q 009250 250 ASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI 329 (539)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (539)
.++..++..+..+.+|++++. +.+.+ + .. ++.+..++..++++..+..++
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~---~~~~~------------~----~~-----------~~~~~~~~~~~~~~~~~~~~~ 231 (417)
T PRK10489 182 AAAGTFITLLPLLRLPALPPP---PQPRE------------H----PL-----------RSLLAGFRFLLASPVVGGIAL 231 (417)
T ss_pred HHHHHHHHHHHHHhCCCCCCC---Ccccc------------c----ch-----------HHHHHHHHHHHcChHHHHHHH
Confidence 888777776666666665321 00000 0 00 000112334455555444333
Q ss_pred HHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 330 GGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
...+... ......+.|.+.++ .+.+.. ..+.+.....+...++ .++.+++.||.++++.+..+.++..+
T Consensus 232 ~~~~~~~-----~~~~~~~~p~~~~~~~g~~~~-~~g~~~~~~~~g~~ig----~~~~~~l~~~~~~~~~l~~~~~~~~~ 301 (417)
T PRK10489 232 LGGLLTM-----ASAVRVLYPALADEVWQMGAA-QIGLLYAAVPLGAALG----ALTSGWLAHSARPGLLMLLSTLGSFL 301 (417)
T ss_pred HHHHHHH-----HHhHHHhhHHHHHhccCCChh-HhHHHHHHHHHHHHHH----HHHHHHhhhccCcchHHHHHHHHHHH
Confidence 2222111 22344456777776 555433 4444444444444333 88999999997777777777766666
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
+.+++... + .........+..+++.+. .+...+++.|..|++.||++.|+.+...++|..++|.+.|.+
T Consensus 302 ~~~~~~~~---------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l 371 (417)
T PRK10489 302 AVGLFGLM---------P-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGL 371 (417)
T ss_pred HHHHHHcc---------c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHH
Confidence 65554331 1 122222223333333333 344557788999999999999999999999999999999999
Q ss_pred HHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHHHHHH
Q 009250 488 VETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEM 528 (539)
Q Consensus 488 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (539)
.+..|+...+...+++.++..++.+...++.|+++.+|.++
T Consensus 372 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 372 GAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 99999988888888877777777777778877766665543
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=273.98 Aligned_cols=380 Identities=14% Similarity=0.083 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
++.+....+..++..+......+..|.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3445555555566666666777889999999999 88889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC--------
Q 009250 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-------- 237 (539)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-------- 237 (539)
++.++++++++++.++++|+++|++.+.. .....+++|++|+++|++++++.....++|..+++.+.+.+.
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998865 445668999999999999999998777777766655443321
Q ss_pred -CCcchhHHHHHhhHHHHHHHHHHhcccccc-hHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh
Q 009250 238 -DDPHWWRTMLYIASLPGFILALGMQFTVES-PRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (539)
Q Consensus 238 -~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (539)
+..+ ||+.|++.+++.++..+..++++++ |+ ++.++.. ++.+.++.+....+
T Consensus 192 ~~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~--------------------~~~~~~~~~~~~~~ 245 (476)
T PLN00028 192 PSFTA-WRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK--------------------KSGTMPKDSFSKVL 245 (476)
T ss_pred cchhh-hHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH--------------------hcCccccccHHHHH
Confidence 1235 9999999999888776666555543 31 0000000 00000000111223
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
++.++++..+...+....... .......+.|.++. +.+.+.. ..+....+..+.+.++ +++.|+++||++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~-~a~~~~~~~~~~~~ig----~~~~G~lsDr~~ 316 (476)
T PLN00028 246 RYGVTNYRTWILALTYGYSFG----VELTMDNIIAEYFYDRFGLSLE-TAGAIAASFGLMNLFA----RPAGGYLSDVAA 316 (476)
T ss_pred HHHHcCchhHHHHHHHHHHHH----HHHHHHhHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HhhhHHHHHHHH
Confidence 444555554443332222211 22233444555554 4466543 4444444444444333 999999999998
Q ss_pred Cch-------hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhh
Q 009250 395 RQK-------LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMG 467 (539)
Q Consensus 395 ~r~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 467 (539)
||+ ...+...+.++..+++.. . .+........+++..+... ..+..+.+..+..| +.+|++.|
T Consensus 317 ~r~~~~~r~~~~~~~~~l~~i~~~~~~~----~----~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g 386 (476)
T PLN00028 317 RRFGMRGRLWALWIVQTLGGVFCIWLGR----A----NSLGAAIVVMILFSIFVQA-ACGATFGIVPFVSR-RSLGVISG 386 (476)
T ss_pred HhcCcchhHHHHHHHHHHHHHHHHHhcc----c----chHHHHHHHHHHHHHHHHH-hhhhhcccCcccCh-hhchhhhh
Confidence 652 111122221121111111 0 0111222222222222211 22234455566654 57999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 468 FSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 468 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+.+...++|++++|.+.+ ..+..+|...|.+.+++.+++.++.++.
T Consensus 387 ~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 387 LTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 998887788877776654 1123358888888887777776655443
No 41
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.1e-33 Score=275.98 Aligned_cols=391 Identities=15% Similarity=0.124 Sum_probs=256.5
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
+|.++....+...........++..+|.+.+++|+ +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 45555555555554444556677889999999999 8888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHH-HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 165 ILGAIISAQAHSLDEMLW-GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
++++++++++++++.+++ .|+++|++.+...+...+++.++++ ++|+++.++.+.+..+|..+++++++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-w 172 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-W 172 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-h
Confidence 999999999999999875 5799999999877778888899996 779999999999999999999999998888777 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCC-cchhhhhhccC
Q 009250 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDL-DSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 322 (539)
|+.|++.+++.++..+..+++.+.++.. .+.+.++.. ........+ +.. .+...++. +....++++++
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~ 241 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQ-RVSKSKSKE----GLPPDGSTK----KLS--KKSTAEKINRFLDFSLFTHR 241 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccc-ccccccccc----cCCCCCccc----ccc--ccchhhhhhhhcchHHhcCc
Confidence 9999999988776655444433222100 000000000 000000000 000 00000000 00012355665
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc--CCchhhH
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE--GRQKLLI 400 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~--g~r~~~~ 400 (539)
.++.......+... .+.....+.+.+.++.+.+.. ..+...++..+...++ +++.+++.||. ++|+...
T Consensus 242 ~~~~~~~~~~l~~~----~~~~~~~~l~~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~d~~~~~~~~~~~ 312 (455)
T TIGR00892 242 GFLVYLSGNVIMFL----GFFAPIIFLVPYAKDKGVDEY-EAAFLLSIIGFVDIFA----RPSCGLIAGLKWIRPHVQYL 312 (455)
T ss_pred hHHHHHHHHHHHHH----HccchHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHhcccccCHHHHHH
Confidence 55443332222222 233344566666777766543 4555555555544333 88899999973 3333333
Q ss_pred hhH--HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHH
Q 009250 401 GSY--LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 401 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 477 (539)
++. +..+++.+++... .+... +....+..+++.+ ..+...+.+.|.+|+++++++.|+.+...++|.
T Consensus 313 ~~~~~~~~~l~~ll~~~~---------~~~~~-~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 382 (455)
T TIGR00892 313 FSFALLFNGLTHLLCALA---------GDYTG-LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAV 382 (455)
T ss_pred HHHHHHHHHHHHHHHHHh---------chHHH-HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHH
Confidence 322 2222222222220 11222 2222222233332 345566778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHH
Q 009250 478 FLVGLFFLDLVETFG-VAPVYAGFGGVSLLSAL 509 (539)
Q Consensus 478 ~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~ 509 (539)
+++|.+.|.+.+..| |...|++.+++.+++.+
T Consensus 383 ~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 383 LIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999875 88888887777666554
No 42
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=6.9e-32 Score=270.47 Aligned_cols=385 Identities=16% Similarity=0.153 Sum_probs=267.1
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.++.++++.++..++...+.+.+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 35667778888889998999999999999999 8888899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988887 99999
Q ss_pred HhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHH---------HcCCcc---hHHHHHH----------HHHHH
Q 009250 248 YIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIAN---------LWGESE---INKAIEE----------FQLVI 304 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~----------~~~~~ 304 (539)
++......+..+.... .|+.+. .+.+.+........ ..+.+. ....... ....+
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9988776666554443 343321 11222222111000 000000 0000000 00000
Q ss_pred HhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchh
Q 009250 305 KKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
++...++.. ..++++++.+.......++... ......++.|++++. .+.+.. ..+.......+... ++.
T Consensus 245 ~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~----~~~ 314 (471)
T PRK10504 245 ARNNNRALF-SLKLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGFSPF-HAGLMMIPMVLGSM----GMK 314 (471)
T ss_pred HhcCCCCcc-CHHHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHH----HHH
Confidence 111111111 2246777766554443333332 344455667777775 455433 44444333333332 227
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccc
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRG 463 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 463 (539)
++.+++.||+++|+.+..+..+..+...++..... ............+.+.+.+.. .+.......+..|++.++
T Consensus 315 ~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g 388 (471)
T PRK10504 315 RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL-----LGWYYLLPFVLFLQGMVNSTR-FSSMNTLTLKDLPDNLAS 388 (471)
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc-----cccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCHHhcc
Confidence 88999999999999998888877776665544211 001111111122222222222 233456677888999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Q 009250 464 KIMGFSFSVHWVCNFLVGLFFLDLVETFGVA 494 (539)
Q Consensus 464 ~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~ 494 (539)
.+.|+.++...+|..+++.+.|.+.+..|+.
T Consensus 389 ~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 389 SGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999998887763
No 43
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=8.9e-32 Score=272.36 Aligned_cols=414 Identities=21% Similarity=0.198 Sum_probs=292.5
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (539)
..+.............++..+ .+.+.. +.....+..+++++|..+|++++|+++||+|||+++++++++..++.++
T Consensus 89 ~~~~~~~~~~~~~~~~s~~~~--~~~~c~--~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~ 164 (521)
T KOG0255|consen 89 VICLDGWVYDYGSSVYSIVSE--WNLVCD--SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGIL 164 (521)
T ss_pred ccccceeEecCCCCcccccch--hceeeC--cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHH
Confidence 333333333334444444433 344444 7777899999999999999999999999999999999999999999999
Q ss_pred HHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009250 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (539)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 250 (539)
+++++|++.+++.|+++|++.++...+...++.|++++++|+.+..+ ......+..+++..++++.. + ||+.+++.
T Consensus 165 ~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~ 240 (521)
T KOG0255|consen 165 TAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWII 240 (521)
T ss_pred HHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 66777777777777777665 4 99999999
Q ss_pred HHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCc----chHHHHHHH--HHHHHhcCCCCcchhhhhhccCch
Q 009250 251 SLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGES----EINKAIEEF--QLVIKKDGSDLDSQWSELLEEPHS 324 (539)
Q Consensus 251 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 324 (539)
.+++++.++..++.+|+|||+..+++.+++.+.+++..+.+ ...+..... ....+....+++..+.++++.+..
T Consensus 241 ~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 241 SIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRL 320 (521)
T ss_pred HHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHH
Confidence 99999888886667799999999999999999888875422 111111111 111112222233557788888754
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHH
Q 009250 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYL 404 (539)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~ 404 (539)
+...+...+..+ .+....+-........+.+.. ......+...... ....+...|+.|||.....+..
T Consensus 321 ~~~~~~~~~~~~----~~~~~y~gl~~~~~~lg~~~~-~~~~~~~~~~~p~-------~~~~~~~~~~~gR~~~~~~~~~ 388 (521)
T KOG0255|consen 321 RYRTLYLLFIWF----VFSLVYYGLSLNVSGLGGNIY-LNFTLSGLVELPA-------YFRNGLLLPEFGRRPPLFLSLF 388 (521)
T ss_pred HHHHHHHHHHHH----HHhHHHHhhhhhhhhcCchHH-HHHHHHHHHHhhH-------HHHHHHHHHHhCcHHHHHHHHH
Confidence 444333333332 122222223333344444433 3344444455555 7777899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 405 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
+..++++...+..... ..+.......+..++.+.+... .+.+..|++|+..|..+.+.......++++++|.+.
T Consensus 389 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 389 LAGIGLLLFGWLPDDL-----GGWLHWILPLLGKFFIGSAFNL-IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHhhccc-----hhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888755311 1112222333333333333333 478889999999999999999999999999999887
Q ss_pred HHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCCHHHHHHHhc
Q 009250 485 LDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSLN 531 (539)
Q Consensus 485 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (539)
..... ......+.+++....+.+++...++||++.+.+.+..++.+
T Consensus 463 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 463 LLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 64433 33333333356666666766778999999988765544443
No 44
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.2e-32 Score=268.57 Aligned_cols=377 Identities=15% Similarity=0.089 Sum_probs=263.0
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
++.+.....+.+..++..+....+.+.+|.+.+++|. ++.+.++..+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 4556667777888888888889999999999999999 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 242 (539)
+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|.+++++......+|..++|.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~- 165 (406)
T PRK15402 87 FFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP- 165 (406)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-
Confidence 9999999999999999999999999999998889999999999999999999999988888999999999998888777
Q ss_pred hHHHHHhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhcc
Q 009250 243 WRTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (539)
||+.|++.++..++..+..+ ..||+++.. ++ + . .. ++....++.++++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-------------~---~~-----------~~~~~~~~~~~~~ 214 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRV---GE-K-------------L---SL-----------KELGRDYKLVLKN 214 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc-c-------------c---cH-----------HHHHHHHHHHHcC
Confidence 99999998888777665443 355543210 00 0 0 00 0011234556666
Q ss_pred CchhHHHHHHHHHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhH
Q 009250 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLI 400 (539)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~ 400 (539)
+..+...+...+... .......+.|.++ +..+.+.. ..+.......+... ++.++.+++.||+++|+.+.
T Consensus 215 ~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~~~-~~g~~~~~~~~~~~----~g~~~~g~l~~r~~~~~~~~ 285 (406)
T PRK15402 215 RRFVAGALALGLVSL----PLLAWIALSPVILISGEQLSSY-EYGLLQVPVFGALI----AGNLTLARLTSRRPLRSLIR 285 (406)
T ss_pred cHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCCCHH-HHHHHHHHHHHHHH----HHHHHHHHHHHhcCHHHHHH
Confidence 665543333222221 1222333445554 44555543 33333222222222 22899999999999999888
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHH
Q 009250 401 GSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLV 480 (539)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 480 (539)
.+.+...++..++....... .....+......+...+.+.. .+........ .+++++|++.++.+....++..++
T Consensus 286 ~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g 360 (406)
T PRK15402 286 MGLWPMVAGLLLAALATVIS---SHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVG 360 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcc---cccHHHHHHHHHHHHHHHHHH-hhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHH
Confidence 88877777766665532111 011112222223333333222 2222232322 344789999999999999999999
Q ss_pred HHHHHHHHHHhCcchhhHHHHHHHHHH
Q 009250 481 GLFFLDLVETFGVAPVYAGFGGVSLLS 507 (539)
Q Consensus 481 ~~~~~~l~~~~g~~~~~~~~~~~~~~~ 507 (539)
+.+.+.+.+..+.....+..++..++.
T Consensus 361 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 361 IELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999888777554433333333333
No 45
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.5e-33 Score=276.63 Aligned_cols=394 Identities=14% Similarity=0.110 Sum_probs=267.4
Q ss_pred CCchHHHHHHHHHHHhhhhhcccccchhHHHHHH----------------------HhCCCCCchhhHHHHHHHHHHHHH
Q 009250 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAK----------------------ELGFEGNPILEGLVVSIFIAGAFV 139 (539)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~s~~~~~~~~ 139 (539)
.+.++.+..++.++..+...++..++...+.+.+ |+++ +..+.|++.+++.+++.+
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQII 91 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHH
Confidence 3456778888888888889999888888887766 6777 888899999999999999
Q ss_pred HHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh--hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhh
Q 009250 140 GSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTL 217 (539)
Q Consensus 140 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 217 (539)
++++.|+++||+|||+++..+.++++++++++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999999887654 5688899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCc-chhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHH
Q 009250 218 CQVGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINK 295 (539)
Q Consensus 218 ~~~~~~~G~~~~~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (539)
...+..+|.++++++++.+.+.. + ||+.|++.++++++..++.++ .+|+|+.. +...++.
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~--------------- 233 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCISKFE--------------- 233 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCCCHHH---------------
Confidence 99999999999999999988874 7 999999999988877666555 45555311 0000000
Q ss_pred HHHHHHHHHH--hcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHH
Q 009250 296 AIEEFQLVIK--KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTN 372 (539)
Q Consensus 296 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 372 (539)
.+..++..+ ++..+.+..++++++++..+...+.... .......+..+.|.++++ .+.+. ...+....+..
T Consensus 234 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lp~~l~~~~g~s~-~~~g~~~~~~~ 307 (465)
T TIGR00894 234 -KKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFG----HFWLYTILPTYLPTFISWVLRVSG-KENGLLSSLPY 307 (465)
T ss_pred -HHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCcCh-HHhHHHHHHHH
Confidence 000000000 1111123356777776655544433322 222445566677777755 45543 35555555555
Q ss_pred hcccccccchhhhHHHHhhhcCCchhh--------HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc
Q 009250 373 FAGLRSEKYCALCASYLMDKEGRQKLL--------IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG 444 (539)
Q Consensus 373 ~~~~i~~~~~~~~~g~l~dr~g~r~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (539)
+.+.++ .++.|+++||+++|+.. ..+......+...+.... .. ......+..+........+
T Consensus 308 ~~~~i~----~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~l~~~~~~~ 377 (465)
T TIGR00894 308 LFAWLC----SIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY-LS-----AAFYLTIIILTLANAVSSG 377 (465)
T ss_pred HHHHHH----HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-cC-----CchHHHHHHHHHHHHHhhh
Confidence 554433 89999999997654321 111111111111111111 00 1111112222222222222
Q ss_pred cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--C-cchhhHHHHHHHHHHHHhhh
Q 009250 445 AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF--G-VAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 445 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~--g-~~~~~~~~~~~~~~~~~~~~ 512 (539)
..+.......|..|+ .+|.+.|+.+....++++++|.+.|.+.+.. + |...|.+.+++.+++.++..
T Consensus 378 ~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 378 PLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred hhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 223333445566665 7999999999999999999999999887653 2 67778877777777766543
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.9e-32 Score=267.05 Aligned_cols=383 Identities=20% Similarity=0.284 Sum_probs=262.0
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
++++.+....+..+..+++.....+..|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 345566666777778888888888899999999999 888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+ |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~ 170 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-W 170 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988888 9
Q ss_pred HHHHHhhHHHHHHHH-HHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 244 RTMLYIASLPGFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
|+.|++.++..++.. +...++||++++..++ +.++..+..+........+... +.. +.+.+.+..+...+.+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-ALP-EQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-ccc-ccccccchhhHHHHHHhcch
Confidence 999999875555444 4445678877665444 2222222222111110000000 000 00000001111222333333
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhh
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGS 402 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~ 402 (539)
..+.......... ...........+.|.+.++.+.+.. ..+.......+...++ .++.+++.||+++|.... .
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~-~ 320 (398)
T TIGR00895 248 TARITVLLWLLYF-MLLVGVYFLTNWLPKLMVELGFSLS-LAATGGALFNFGGVIG----SIIFGWLADRLGPRVTAL-L 320 (398)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHhhcchHHHHH-H
Confidence 3333332222222 2223344555667777777776644 3444444444444333 999999999999984433 3
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 403 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
..+..+...++.... .+........++.+.+.+ ...+...++..|.+|++.|+++.|+.+.+..+|.+++|.
T Consensus 321 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 392 (398)
T TIGR00895 321 LLLGAVFAVLVGSTL-------FSPTLLLLLGAIAGFFVN-GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPI 392 (398)
T ss_pred HHHHHHHHHHHHHHh-------hCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333222211 022222222222222222 234556788899999999999999999999999999999
Q ss_pred HHHHH
Q 009250 483 FFLDL 487 (539)
Q Consensus 483 ~~~~l 487 (539)
+.|.+
T Consensus 393 ~~G~l 397 (398)
T TIGR00895 393 LAGYL 397 (398)
T ss_pred hHHhc
Confidence 99865
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.4e-31 Score=263.79 Aligned_cols=374 Identities=20% Similarity=0.215 Sum_probs=260.0
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCch---hhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPI---LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
...++++.++..+......+.+|.+.+++|++..+. ..|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 445566677778888888999999999999843321 35899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009250 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (539)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 245 (539)
++.++++++++++.+++.|++.|++.+ ..+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+ ||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHH
Confidence 999999999999999999999999865 567788889999999999999999999999999999999998887777 999
Q ss_pred HHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCch
Q 009250 246 MLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (539)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (539)
.|++.+++.++..+..++ ++|+++.. +.++ ..+ .....+.++++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~------------~~~~~~~~~~~~~ 220 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPV----SKKE-----------------MLH------------MREVVTSLKNPKL 220 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccc----cchh-----------------hhH------------HHHHHHhCcCCch
Confidence 999988887766655444 44432100 0000 000 0011122333333
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh---HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh
Q 009250 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG---ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG 401 (539)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~ 401 (539)
...+....+.. .. .......+.+.+..+...... ...+.+..+..+.+. ++.+..|++.||++||+.+..
T Consensus 221 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~----~~~~~~g~l~dr~g~~~~~~~ 293 (408)
T PRK09874 221 VLSLFVTTLII--QV-ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAAL----LSAPRLGKLGDRIGPEKILIT 293 (408)
T ss_pred HHHHHHHHHHH--HH-HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhccccchhHHH
Confidence 22222111111 11 122233344445444333221 112233333333332 228889999999999998888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLV 480 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 480 (539)
+..+..++.+.+... .+. ..+....+..+++.+ ..+.......+..|++.+|+..++.+.+..+|..++
T Consensus 294 ~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~g 363 (408)
T PRK09874 294 ALIFSVLLLIPMSFV---------QTP-LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTG 363 (408)
T ss_pred HHHHHHHHHHHHHHh---------ccH-HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhh
Confidence 777666555544331 111 222222222222222 234455566678888899999999999999999999
Q ss_pred HHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 481 GLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 481 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
|.+.|.+.+..|++..|.+.+++.+++.++.++.
T Consensus 364 p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 364 PLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888877765443
No 48
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=7.7e-32 Score=266.64 Aligned_cols=403 Identities=15% Similarity=0.119 Sum_probs=261.9
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
++..++...+...........+....|.+++ +|+ ++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3555666667777777777777777888776 588 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC-C
Q 009250 165 ILGAIISAQA----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-D 239 (539)
Q Consensus 165 ~~~~~~~~~a----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~ 239 (539)
+++.+++++. ++++.+.+.|++.|++.+..++.....+.|++|+++|++++++++.+..+|..+++.+.+.... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9999888765 4677888999999999999999999999999999999999999999999999998877654433 3
Q ss_pred cchhHHHHHhhHHHHHHHHH-HhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcch-hhh
Q 009250 240 PHWWRTMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ-WSE 317 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 317 (539)
.+ ||+.|++.++++++..+ ..++++|+|+....+. .+.. +.+.. +. ..+. .+.+.+.+.. .+.
T Consensus 182 ~~-w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~-~~----~~~~-~~~~~~~~~~~~~~ 246 (438)
T TIGR00712 182 ND-WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP--IEEY------RNDYP-DD----YNEK-AEQELTAKEIFMQY 246 (438)
T ss_pred hh-hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC--chhc------ccccc-cc----cccc-cccccchHHHHHHH
Confidence 45 99999998888777654 4455677664211000 0000 00000 00 0000 0000000111 123
Q ss_pred hhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCc
Q 009250 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQ 396 (539)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r 396 (539)
.++++..+...+...+... .......+.|.++++. +.+.. ..+....+..+.+.++ .+++|++.||++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~-~~~~~~~~~~~~~~ig----~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYL----LRYGVLDWSPTYLKEVKHFALD-KSSWAYFLYEYAGIPG----TLLCGWMSDKVFKG 317 (438)
T ss_pred HccCchHHHHHHHHHHHHH----HHHHHHHhHHHHHHHccCCChh-hHHHHHHHHHHHHHHH----HHHHHHHHHHhccC
Confidence 5566655554333322222 2334556778887764 44433 3344333333333333 99999999999654
Q ss_pred hhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCcccccchhhHHHHHHHH
Q 009250 397 KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV 475 (539)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 475 (539)
+....+.....+..+........+ ..+.... ...++..++. .+..........|.+|++.|+++.|+.+...++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 392 (438)
T TIGR00712 318 NRGATGVFFMTLVTIAVIVYWMNP----AGNPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYL 392 (438)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcC----CCchHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHh
Confidence 322223222222211111111001 0111111 1122222222 111122223566899999999999999999888
Q ss_pred HH-HHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCC
Q 009250 476 CN-FLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 476 g~-~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (539)
++ +++|.+.|.+.|+.|+...+.+.+++.+++.++.+.+.+|.|
T Consensus 393 gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 393 GGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 75 689999999999999999998888887777777766666654
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.3e-32 Score=265.69 Aligned_cols=374 Identities=17% Similarity=0.124 Sum_probs=251.7
Q ss_pred HHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh
Q 009250 95 SNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (539)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (539)
++++..++...++...|.+.+++|+ +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 3456677888888999999999999 88899999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHH-HhcCCCCCCcchhHHHHHhhHHH
Q 009250 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL-FLGIPAEDDPHWWRTMLYIASLP 253 (539)
Q Consensus 175 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~~~~~l~~~~~~wr~~f~~~~~~ 253 (539)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+ ||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 159 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGII 159 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 56666666666 99999998887
Q ss_pred HHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHH
Q 009250 254 GFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGA 332 (539)
Q Consensus 254 ~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (539)
.++..+.. ++.+|+|+....+...++. .++. ++.++..+++.+..+...+.+++++..+...+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMP---------NEEP----DGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYV 226 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCc---------cccc----ccccccccccccchHHHHHHHHhcchHHHHHHHHH
Confidence 76655444 4466655311000000000 0000 00000000111111223455666665554443333
Q ss_pred HHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHH
Q 009250 333 LFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISML 411 (539)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 411 (539)
+... .......+.|.++++ .+.+.. ..+.......+.+.++ .++.+++.||..+++..............
T Consensus 227 ~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~----~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 227 FVYV----VRTGILDWSPLYLTQEKGFSKE-KASWAFTLYELGGLVG----TLLAGWLSDKLFNGRRGPLAVFFMALIIV 297 (379)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHcchh----HHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 3222 233445556666654 455433 4555555555555444 99999999986433322222222111111
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 412 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
.+......+ ...........+.......+..+....+..|..|++.|+++.|+.+...++|+.++|.+.|.+.+..
T Consensus 298 ~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 298 SLLVYWLNP----AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHHHHhcCc----chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 111111000 0111111122222222222333444567789999999999999999999999999999999999999
Q ss_pred Ccchhh
Q 009250 492 GVAPVY 497 (539)
Q Consensus 492 g~~~~~ 497 (539)
||+..|
T Consensus 374 g~~~~f 379 (379)
T TIGR00881 374 GWAGAF 379 (379)
T ss_pred cccccC
Confidence 987653
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=4.6e-31 Score=258.23 Aligned_cols=377 Identities=16% Similarity=0.109 Sum_probs=249.1
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+....++.++.........+.++.+.+|+|. ++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4444444455555555555566777789998 88999999999999999999999999999999999999999999987
Q ss_pred HHHH---h-hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHH-HHHHHhcCCCCCCcchh
Q 009250 169 IISA---Q-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGI-ITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 169 ~~~~---~-a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~l~~~~~~w 243 (539)
+++. + .++++.+++.|+++|++.+...+...+.+.+++|+++|++++|+.+++.++|. .+++++++.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~ 171 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-E 171 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-h
Confidence 7653 3 35888899999999999998888888899999999999999999999999997 689999988887777 6
Q ss_pred HHHHHhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 244 RTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
+..+|......++..++.+ +.++.++.. ++++ + ++.++.+..++.+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~---------------~~~~~~~~~~~~~~~~~ 222 (402)
T TIGR00897 172 MNTLWSALAFVLTGGVIALFSNKDIFTPQ-HMQT-------------R---------------EKFSELGKAATILFTNP 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCcc-cccC-------------C---------------cchhhHHHHHHHHHcCh
Confidence 6665554443333333222 233321100 0000 0 00000112344566666
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhH-h
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLI-G 401 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~-~ 401 (539)
..+...+...+. .........+.|.+.++.+.+.. ..+...+...+.+.++ .+..|+++||++||+.+. .
T Consensus 223 ~~~~~~~~~~~~----~~~~~~~~~~~p~~~~~~g~s~~-~~~~~~~~~~~~~~ig----~~~~g~l~dr~~~~~~~~~~ 293 (402)
T TIGR00897 223 NVLLGGMVRIIN----TIGLFGFAVFLPMFVAELGFSTS-EWLQIWGTFFFTNIVF----NVIFGIVGDKLGWMNTVRWF 293 (402)
T ss_pred hHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCCChh-HHHHHHHHHHHHHHHH----HHHHHHHHHhhcchhHHHHH
Confidence 655433332222 22344456677888888776654 3444444444444333 999999999999888653 2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
+.+...++...+....... ....+.......+.+.+.+ +..+. .....|..| ++||++.|+.+...++++.++|
T Consensus 294 ~~l~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~G~~~~-~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp 367 (402)
T TIGR00897 294 GGVGCGIFTLALYYIPQHF---GHSFAVALIIAIALGIFLA-GYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAP 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHcc---CCcHHHHHHHHHHHHHHHH-HHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHH
Confidence 3333333333332211100 0011222222222222222 12332 344556555 5799999999999999999999
Q ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 482 LFFLDLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 482 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
.+.|.+.+..|+...+++.+++.+++.++..
T Consensus 368 ~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 368 AIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888777766543
No 51
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1e-31 Score=270.87 Aligned_cols=385 Identities=18% Similarity=0.157 Sum_probs=269.3
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.+..++++.++..++..+.++.+|.+.+++|. +..+.+|+.+.+.++..++.++.|+++||+|||+++..+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 46677788889999999999999999999999 7888899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
++++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+++.+++++.++.+ ||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 99999
Q ss_pred HhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHH----------HHcCCcch--HH-HHHHH---------HHHH
Q 009250 248 YIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIA----------NLWGESEI--NK-AIEEF---------QLVI 304 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~--~~-~~~~~---------~~~~ 304 (539)
++.++++++..++..+ .||+++ ..+++.+....... ...+.... +. ..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKP--AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCccc--cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9988887766654443 455432 11112221111000 00111000 00 00000 0000
Q ss_pred HhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchh
Q 009250 305 KKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
++...+.+....++++++.++...+...+..+ .+....++.|.++++. +.+. ...+.......+...++ .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~s~-~~~g~~~~~~~~~~~~~----~ 308 (485)
T TIGR00711 238 WELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL----GLYGSFYLLPLYLQQVLGYTA-LQAGLHILPVGLAPMLS----S 308 (485)
T ss_pred HHHcCCCCccCHHHHcCCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHH----H
Confidence 11111111222356666666554443333332 3334556677777664 4443 34555544444444333 9
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccc
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRG 463 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 463 (539)
++.|++.||++||+.+..+..+..++..++..... .....+.......+.+.+.+....+ ......+..|+++++
T Consensus 309 ~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~g~~~~~~~-~~~~~~~~~~~~~~g 383 (485)
T TIGR00711 309 PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT----PDTPFLAIALPQFIRGFGMGCFFMP-LTTIALSGLPPHKIA 383 (485)
T ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCHHHHh
Confidence 99999999999999988888777777666542111 1111222222223333333322223 334455778999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 464 KIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 464 ~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
++.|+.+..+++|+.+++.+.+.+.++.
T Consensus 384 ~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 384 RGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988753
No 52
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=8e-31 Score=255.38 Aligned_cols=361 Identities=16% Similarity=0.102 Sum_probs=250.9
Q ss_pred HHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH-HHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGAIIS 171 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~ 171 (539)
+.+++..+......|.+|. +++++|. +..+.|++.+++.+...+.+++.|+++||+||||.++. +.++..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 4466777778888888886 5788999 88999999999999999999999999999999887654 666667788889
Q ss_pred HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccc--hhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSL--GTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
++++|++.+++.|+++|.+.+...|...++..|+.++++|++. .+....+.++|..+++.+++.+.+..+ ||+.|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHH
Confidence 9999999999999999988888889888999999887777654 577888889999999999999988777 9999999
Q ss_pred hHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHH
Q 009250 250 ASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (539)
Q Consensus 250 ~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (539)
.++..++..+..+ ++||+|+...+ +....+.++.++++..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~ 205 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYPRGAPG-----------------------------------ALTRLEVRGLLASRDTRLLF 205 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcccCccc-----------------------------------ccCcchhhhhhcCcchHHHH
Confidence 9888776665544 46776531000 00001122344455444433
Q ss_pred HHHHHHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 329 IGGALFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
....+... .......+.|.++ ++.+.+.. ..+...........++ .++.|++.||++||+.+..+.+...
T Consensus 206 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~----~~~~g~l~~r~g~~~~~~~~~~~~~ 276 (375)
T TIGR00899 206 VACTLMWG----CNILYIINMPLLIIHELGLPDK-LAGLMMGTAAGLEIPF----MLLAGYLIKRFGKRRLMLLAALAGV 276 (375)
T ss_pred HHHHHHHH----HHHHHHhhhHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHhHHHHHHHhcchhHHHHHHHHHH
Confidence 33222222 1222233445454 44555543 4444444433333222 7889999999999998877666544
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 408 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
+....+.... +.+.......+...+.+. ..+....+..|..|++ ++++.++.+...++|..++|.+.|.+
T Consensus 277 ~~~~~~~~~~--------~~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~ 346 (375)
T TIGR00899 277 AFYTGLAADN--------SLWALLMLQLLNAIFIGI-LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHH--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433332211 112122222222222221 2344556677888765 67999999999999999999999999
Q ss_pred HHHhCcchhhHHHHHHHHHHHHhh
Q 009250 488 VETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 488 ~~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
.+..|++..+++.+++.+++.++.
T Consensus 347 ~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 347 AERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHhccchhHHHHHHHHHHHHHHHH
Confidence 999999999988888777776654
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1e-30 Score=255.72 Aligned_cols=352 Identities=14% Similarity=0.149 Sum_probs=249.7
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.+..+.+..++..+......+..|.+.+++|. ++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 34444555566777888889999999999999 8889999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 162 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIF 162 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777 99999
Q ss_pred HhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhH
Q 009250 248 YIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (539)
++.++..++..+..+ +.||+++. .+++ +.+ +....+++.++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------~~~---------------~~~~~~~~~~~~~~~~~ 210 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPY----EARI-------------QIS---------------TYFETFLLLLKSKMFWG 210 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC----cccC-------------CHH---------------HHHHHHHHHHcCchhHH
Confidence 998887776655544 35554320 0000 000 00112345556665554
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHH
Q 009250 327 AFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLG 405 (539)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 405 (539)
..+....... .......+.|.+++ +.+.+.. ..+.......+...++ .++.+++.||+++|+.+..+..+
T Consensus 211 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~----~~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 211 YALIYGASFG----GFFAFFSGAPFVYIDIMGVSPS-VFGLLFALNIIAMIFG----GFLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred HHHHHHHHHH----HHHHHHHcChHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHhcCHHHHHHHHHHH
Confidence 4333222222 22334445565554 4555443 4444444444444333 99999999999999988888777
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 406 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
..++.+++....... ..............+.+.+ ..+.......|..| +.++++.++.+.....++.+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~ 355 (385)
T TIGR00710 282 FAVSAVLLEITAILG-----LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV 355 (385)
T ss_pred HHHHHHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 776666554422100 1112222222222222222 23444556667776 4699999999999887777777777
Q ss_pred HHHHH
Q 009250 485 LDLVE 489 (539)
Q Consensus 485 ~~l~~ 489 (539)
+.+.+
T Consensus 356 ~~~~~ 360 (385)
T TIGR00710 356 SLIHG 360 (385)
T ss_pred Hhccc
Confidence 74433
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.9e-30 Score=253.88 Aligned_cols=375 Identities=14% Similarity=0.122 Sum_probs=247.4
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
........+.+..++..++...+.|.+|.+.+++|. +..+.++..+++.+++.++++++|+++||+|||++++.+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 90 (413)
T PRK15403 13 ATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALI 90 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHH
Confidence 333444555666667778889999999999999999 888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
++++++++++++|++.++++|+++|++.+...+...+++.|++++++|+++++++..+..+|..+||++++.+.+..+ |
T Consensus 91 ~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w 169 (413)
T PRK15403 91 FTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-W 169 (413)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-H
Confidence 999999999999999999999999999987777888889999999999999999999999999999999998887777 9
Q ss_pred HHHHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccC
Q 009250 244 RTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (539)
|+.|++.+++.++..+.. +++||+++. +++.. . .+.....++.+++++
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~-------------~---------------~~~~~~~~~~ll~~~ 218 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPF-------------S---------------AKSVLRDFRNVFRNR 218 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCC-------------C---------------hHHHHHHHHHHHcCH
Confidence 999999998877776543 446775420 00000 0 000012345667776
Q ss_pred chhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh
Q 009250 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG 401 (539)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~ 401 (539)
..+...+...+... .......+.|.++++. +.+.. ..+...........++ ..+.+++.++..+++....
T Consensus 219 ~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~-~~gl~~~~~~~~~~i~----~~l~~~~~~~~~~~~~~~~ 289 (413)
T PRK15403 219 LFLTGAATLSLSYI----PMMSWVAVSPVILIDAGGMTTS-QFAWTQVPVFGAVIVA----NAIVARFVKDPTEPRFIWR 289 (413)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhChHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHhccCCchhHHHH
Confidence 66554443322222 2334445567777665 44433 4444332222222111 5666665544444343322
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhH-HHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNL-SILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLV 480 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 480 (539)
...+..++.+++....... .+.+. ......++..+.+.. .|...... ..-....+|++.++.+.....+..++
T Consensus 290 ~~~~~~ig~~l~~~~~~~~----~~~~~~~~~~~~l~~~G~~~~-~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~ 363 (413)
T PRK15403 290 AVPIQLVGLALLIVGNLLW----PHVWLWSVLGTSLYAFGIGLI-FPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVS 363 (413)
T ss_pred HHHHHHHHHHHHHHHHHHc----cccHHHHHHHHHHHHHHHHHH-hHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 2223333333322211000 01111 122333333333322 22222111 11122247999999999999999999
Q ss_pred HHHHHHHHHHhCcchhhHHHHHHHHHHH
Q 009250 481 GLFFLDLVETFGVAPVYAGFGGVSLLSA 508 (539)
Q Consensus 481 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 508 (539)
+...+++.++ +....+...++++.+..
T Consensus 364 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 364 VEIGRWLWFN-GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHHc-CCchHHHHHHHHHHHHH
Confidence 9999987765 55666665555544443
No 55
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-31 Score=243.43 Aligned_cols=384 Identities=15% Similarity=0.121 Sum_probs=292.7
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
..+.+++-.+...+..+...+.+++.+.+.+|+|+ |+.|.+++.++..+...+..++.|.+.||||.|++..++.++.
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 34456666677777777888899999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHH---HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc
Q 009250 165 ILGAIISAQAHSLD---EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (539)
Q Consensus 165 ~~~~~~~~~a~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 241 (539)
.+-++..+++.+++ ++++++++.|++.+ .+.+....+++|||++++|.++|+.. ..++|..+..+++..+....+
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 99999999986554 99999999999776 88899999999999999999999999 899998888888877776665
Q ss_pred --hhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCc-chhhh
Q 009250 242 --WWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD-SQWSE 317 (539)
Q Consensus 242 --~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 317 (539)
.||....+..+..++..+..++ +.|.|.. +...++.. .+.+.
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~----------------------------------r~~~~~~~~~~~~~ 213 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH----------------------------------RASVKPQLPAQLKA 213 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh----------------------------------hccccccchhHHHH
Confidence 3999999988888887666655 5555421 00111111 44666
Q ss_pred hhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCch
Q 009250 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQK 397 (539)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~ 397 (539)
++++++.|...+.+...+ ..+..+..+.|.++++....+...++.......+++.+. ++++|+++||+|.++
T Consensus 214 v~~~~~~W~lsllY~~tF----G~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~----Rp~GG~LsDR~Gg~r 285 (417)
T COG2223 214 VFSNKDTWLLSLLYFATF----GGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALA----RPLGGWLSDRIGGRR 285 (417)
T ss_pred HhcCcchHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHH----Hhccchhhhhccchh
Confidence 777777776655544444 467777888888887665554446556666666666444 999999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHH
Q 009250 398 LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 477 (539)
.+...+..+.++..++........ ...+........+......+.+.. ..+-++...+|++ .|.+.|+...++.+|+
T Consensus 286 v~~~~f~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~~~-~G~v~G~vga~G~lGG 362 (417)
T COG2223 286 VTLAVFVGMALAAALLSLFLTGFG-HGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFPKE-TGAVTGIVGAIGGLGG 362 (417)
T ss_pred HHHHHHHHHHHHHHHHHccccccc-cCcchHHHHHHHHHHHHHhccCcc-hheeechHHHHhh-hhHHHHHHHHhccccc
Confidence 999888888888777766331110 001122222222333333334333 4567787888764 8999999999999999
Q ss_pred HHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhhheeeeC
Q 009250 478 FLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 478 ~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
+.-|...+...+..| +...|+++..+.+++.++.+....+
T Consensus 363 f~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 363 FFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred cchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999 7778888888888887766555433
No 56
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=7.7e-32 Score=261.68 Aligned_cols=353 Identities=13% Similarity=0.082 Sum_probs=256.8
Q ss_pred HHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH
Q 009250 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (539)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (539)
+.++.++..+......+.+|.+..+++. ++.+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 4456677777788888899999999988 88999999999999999999999999999999999999999999999998
Q ss_pred Hhhh-----cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009250 172 AQAH-----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (539)
Q Consensus 172 ~~a~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~ 246 (539)
++++ +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+ ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHH
Confidence 8888 999999999999999999999999999999999999999999999999999999999999988777 9999
Q ss_pred HHhhHHHHHHHHHHhcccc--cchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCch
Q 009250 247 LYIASLPGFILALGMQFTV--ESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (539)
Q Consensus 247 f~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (539)
|++.++..++..+..+.++ |+++ + +.++ ..++..+ +.+..++.+++++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~------------~~~~~~~-----------~~~~~~~~~~~~~~~ 212 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAA----S-EIQA------------LSNAVLR-----------DTREGIKFVLKNPLL 212 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCC----c-cccc------------cchhHHH-----------HHHhHHHHHHcCcHH
Confidence 9998877666655444332 2211 0 0000 0000000 001234556666665
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
+.......+.... .......+.|.+.++ .+.+.. ..+.......+...++ .++.+++.||.+||+.+..+.
T Consensus 213 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~ 284 (365)
T TIGR00900 213 RTLLLLALLFNLV---FAPAIVALFPYVQSKYLGRGST-HYGWVLAAFGLGALLG----ALLLGLLGRYFKRMALMTGAI 284 (365)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHhHHHHHHHhCCchH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhchhHHHHHHH
Confidence 5544433333221 111222556777665 454433 4444444444444333 889999999999999888776
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
.+.+++...+.... . +........+..+++.+ ..+....+..|..|++.|+++.|+.+...+++..++|.
T Consensus 285 ~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~ 355 (365)
T TIGR00900 285 FVIGLAILVVGLTP--------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLI 355 (365)
T ss_pred HHHHHHHHHHHhhc--------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666655554421 1 12222222223333322 34556678889999999999999999999999999999
Q ss_pred HHHHHHHHhC
Q 009250 483 FFLDLVETFG 492 (539)
Q Consensus 483 ~~~~l~~~~g 492 (539)
+.|.+.|..|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999998764
No 57
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=1.9e-30 Score=254.46 Aligned_cols=353 Identities=16% Similarity=0.087 Sum_probs=247.5
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+..+.+...+..+...++.|.+|.+.+++|. ++.+.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 3344444555667778888999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009250 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (539)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 248 (539)
++++++++++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+..+ ||+.|+
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~ 164 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFA 164 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Confidence 9999999999999999999999988888888999999999999999999988899999999999999888888 999999
Q ss_pred hhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHH
Q 009250 249 IASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (539)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (539)
+.+++.++..+..++++|+++. .+ +++.+.+++++++++..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~----~~-------------------------------~~~~~~~~~~~~~~~~~~~~~ 209 (401)
T PRK11043 165 TLFAITLLLILPTLRLKPSKKA----RK-------------------------------QSQDALTFKQLLKSKTYLGNV 209 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCc----cc-------------------------------cchHHHHHHHHHcChhHHHHH
Confidence 9888887776666555554310 00 000112345556665544433
Q ss_pred HHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
+....... .+.....+.|.+.++.+.+.. ..+.......+...+ +.++.+++.||+++|+..........+
T Consensus 210 ~~~~~~~~----~~~~~~~~~p~~~~~~g~s~~-~~g~~~~~~~~~~~~----g~~~~~~l~~r~~~~~~~~~~~~~~~~ 280 (401)
T PRK11043 210 LIFAACSA----AFFAWLTGSPFILEQMGYSPA-DIGLSYVPQTIAFLV----GGYGCRAALQKWGGEQLLPWLLVLFAV 280 (401)
T ss_pred HHHHHHHH----HHHHHHHHhHHHHHHcCCCHH-HHHHHHHHHHHHHHH----HHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 32222111 223344556777777776544 334333332222222 288889999999998876655555544
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHH-HHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILG-TLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
+.+.+....... ......... ..+...+. ....+.......+..|+ .+|++.|+.+.+...++..++.+.|.+
T Consensus 281 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 281 SVIAIWLASLLS----HPSLVPLLIPFCVMAAAN-GAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHhc----cCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 443332221110 011222222 22222222 22334444555566664 699999999999999999999999988
Q ss_pred HHHhCcc
Q 009250 488 VETFGVA 494 (539)
Q Consensus 488 ~~~~g~~ 494 (539)
.+.....
T Consensus 355 ~~~~~~~ 361 (401)
T PRK11043 355 ISTPLLT 361 (401)
T ss_pred cCCChhH
Confidence 7644333
No 58
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.2e-30 Score=254.50 Aligned_cols=370 Identities=14% Similarity=0.091 Sum_probs=250.0
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
....+..+.+..++.++......+..|.+++++|+ ++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34456677777788888999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC----
Q 009250 165 ILGAIIS---AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE---- 237 (539)
Q Consensus 165 ~~~~~~~---~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~---- 237 (539)
+++++++ .++++++.++++|+++|+|.|...+..+.++.|+.++++|.+.+++.+..+.+|..+++.++..+.
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999886 468999999999999999999999999999999887777777899999999999999998875432
Q ss_pred -------------CC-cc-------hhHHHHHhhH-HHHHHHHHH-hcccccchHHHHhcCChhHHHHHHHHHcCCcchH
Q 009250 238 -------------DD-PH-------WWRTMLYIAS-LPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEIN 294 (539)
Q Consensus 238 -------------~~-~~-------~wr~~f~~~~-~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (539)
+. .+ +||++|+... +..++..+. ....||.+. + +.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~-~~----------------- 239 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----D-NH----------------- 239 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-cc-----------------
Confidence 00 01 2666776433 333332222 222343210 0 00
Q ss_pred HHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHH-HHH-cCCChhHHHHHHHHHHH
Q 009250 295 KAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLT-FQD-VGITDGALASLLVGVTN 372 (539)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 372 (539)
.+++..+.....+++++++.++...+..++... .......+.+.+ .++ .+.+.. ..+..+....
T Consensus 240 ---------~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~l~~~~~g~s~~-~ag~~~~~~~ 305 (438)
T PRK10133 240 ---------SDAKQGSFSASLSRLARIRHWRWAVLAQFCYVG----AQTACWSYLIRYAVEEIPGMTAG-FAANYLTGTM 305 (438)
T ss_pred ---------ccccccchhhhHHHHHhCchHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhcCCCCHH-HHHHHHHHHH
Confidence 000000111234566777776654443333322 222222334444 444 354433 5555555555
Q ss_pred hcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccc
Q 009250 373 FAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLV 452 (539)
Q Consensus 373 ~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (539)
+...++ +++++++.||+++|+++..+..+..+.+++..+. .....+....+.+.+. ....|..++.
T Consensus 306 ~~~~vG----~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~glg~-~~i~P~~~s~ 371 (438)
T PRK10133 306 VCFFIG----RFTGTWLISRFAPHKVLAAYALIAMALCLISAFA---------GGHVGLIALTLCSAFM-SIQYPTIFSL 371 (438)
T ss_pred HHHHHH----HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 544444 9999999999999998887776665554444331 1111222222222222 2335667777
Q ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHH
Q 009250 453 IPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSA 508 (539)
Q Consensus 453 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 508 (539)
..+..|++ .+++.++.. +..+|+.++|.+.|.+.|..| .+..|++.....+...
T Consensus 372 a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 372 GIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 77877764 778888876 455789999999999999887 5666665444444333
No 59
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=2.1e-30 Score=253.41 Aligned_cols=353 Identities=17% Similarity=0.207 Sum_probs=240.9
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (539)
......+..........+.+|.+.+++|. ++.+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33444455555556666889999999999 8889999999999999999999999999999999999999999999999
Q ss_pred HHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009250 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (539)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 250 (539)
+.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+ ||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 85 CSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988877777 99999998
Q ss_pred HHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH
Q 009250 251 SLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI 329 (539)
Q Consensus 251 ~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (539)
++..++..+.. ++++|+++. +.+ + +.......++.++++..+...+
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~---~~~-~-----------------------------~~~~~~~~~~~~~~~~~~~~~~ 210 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPA---RAP-A-----------------------------ASSKPRENSESLLNRFFLSRLV 210 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCc---ccC-C-----------------------------ccchHHHHHHHHhCHHHHHHHH
Confidence 88777665544 445554310 000 0 0000011223344444333222
Q ss_pred HHHHHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 330 GGALFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
...+... .......+.|.++ ++.+.+.. ..+.......+.+.++ .++.+++.||++||+.+..+..+..+
T Consensus 211 ~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~----~~~~~~l~~r~g~~~~~~~~~~~~~~ 281 (392)
T PRK10473 211 ITTLSVT----VILTFVNTSPVLLMEQMGFSRG-EYAIIMALTAGVSMTV----SFSTPFALGIFKPRTLMLTSQVLFLA 281 (392)
T ss_pred HHHHHHH----HHHHHHHhCHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2222111 1112223344444 44565543 3444444444444333 89999999999999998888887777
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 488 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~ 488 (539)
+.+.+.... ..+.......+...+++.+... ....+..|.+.++ |..+....++..+++.+.+.+.
T Consensus 282 ~~~~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~ 347 (392)
T PRK10473 282 AGITLALSP--------SHAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLA 347 (392)
T ss_pred HHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 766665522 1222222233333333332221 2223444544343 4445556677788888888888
Q ss_pred HHhCcchhhHHHHH
Q 009250 489 ETFGVAPVYAGFGG 502 (539)
Q Consensus 489 ~~~g~~~~~~~~~~ 502 (539)
+..|+.....+.+.
T Consensus 348 ~~~g~~~~~~~~~~ 361 (392)
T PRK10473 348 AVLGISAWNMLIGI 361 (392)
T ss_pred HHhccchhHHHHHH
Confidence 88887654444443
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=4.4e-30 Score=247.95 Aligned_cols=345 Identities=29% Similarity=0.375 Sum_probs=276.1
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (539)
.+.+..+...++.....+..|.+.+++|. ++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 45566777888888999999999999988 8889999999999999999999999999999999999999999999999
Q ss_pred HHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009250 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (539)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 250 (539)
+.++++++.++++|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+..+ ||+.|++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877 99999998
Q ss_pred HHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHH
Q 009250 251 SLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (539)
Q Consensus 251 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (539)
++..++..+...+++ +..+.
T Consensus 160 ~~~~~~~~~~~~~~~--------------------------------------------------------~~~~~---- 179 (352)
T cd06174 160 AILGLLLALLLLFLL--------------------------------------------------------RLLLL---- 179 (352)
T ss_pred HHHHHHHHHHHHHHH--------------------------------------------------------HHHHH----
Confidence 888777766554432 11111
Q ss_pred HHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCch-hhHhhHHHHHH
Q 009250 331 GALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQK-LLIGSYLGMAI 408 (539)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~ 408 (539)
.....+...........+.+.+.++. +.+.. ..+.......+...++ .++.+++.||++||+ .+..+..+..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAA-EAGLLLSLFGLGGILG----ALLGGLLSDRLGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 12222222334555666777777665 44433 4555555555544333 999999999999999 88888888888
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 488 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~ 488 (539)
+.+.+.... +...................+....+..|..|+++|++..|+.+...+++..++|.+.+.+.
T Consensus 255 ~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 255 GLLLLALAP---------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred HHHHHHHhc---------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777766521 12222222222222233345677788999999999999999999999999999999999999
Q ss_pred HHhCcchhhHHHHHHHHHHHHhhh
Q 009250 489 ETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 489 ~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
+..++...+.+.+++.+++.++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 326 DTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999988888888776543
No 61
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=1.5e-30 Score=251.19 Aligned_cols=348 Identities=24% Similarity=0.311 Sum_probs=248.9
Q ss_pred HHHHhhhhhcccccchhHH-HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH
Q 009250 93 SMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (539)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (539)
+++.++..+......+.+| .+.+++|. +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 4566777888888889999 89999999 88889999999999999999999999999999999999999999997777
Q ss_pred HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009250 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (539)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 251 (539)
.+++|++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+ ||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 7778888999999999999999999999999999999999999999999999999999999999998777 999999999
Q ss_pred HHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHH
Q 009250 252 LPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (539)
Q Consensus 252 ~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (539)
++.++..++. .+++++|+....+.+.++. ++.+++..+.++.+++++..+..+..
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESPKESE------------------------SKKPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccccccc------------------------cccccccccccccccccchhhhhhhh
Confidence 9998887642 3444433210000000000 00000001125556666655522222
Q ss_pred HHHHHHhhhhhhHHHHHhHHHH-HHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHH
Q 009250 331 GALFLLQQFAGINGVLYFSSLT-FQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAIS 409 (539)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 409 (539)
.....+ .......+.|.+ .+..+.+.....+...++..+.+.++ .++.+++.||+++|+..........+.
T Consensus 215 ~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 215 FFLFFF----VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIG----SLLAGRLSDRFGRRRRLLIAILLLILG 286 (352)
T ss_dssp HHHHHH----HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHH----HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 222222 333456666766 45556652235555555555555444 899999999999988777766666665
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHH
Q 009250 410 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
.+.+...... .+.........+.+.+ .....+....+..+..|++++|++.|+.+...++++.++|
T Consensus 287 ~~~~~~~~~~-----~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 287 ALGLLLLPFS-----SSPVWLIIALFLIGFG-FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCSHHH-----CHHHHHHHHHHHHHHH-HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555442210 0112222222222222 2223566778889999999999999999999999999987
No 62
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=246.45 Aligned_cols=370 Identities=12% Similarity=0.085 Sum_probs=257.3
Q ss_pred HHHHHHHHhhhhhcccccchhHH-HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
+..+.+..++.........+.+| .+.+++|+ +..++|++.+.+.++..+++++.|+++||+|||++++++.++.+++
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 33444556666777777777665 55678999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
.++.+++++++.++++|++.|.+.+...+...++..|.+++++|++++++.....++|..++|.+++.+.. .+ |+..|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f 164 (395)
T PRK10054 87 FIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPF 164 (395)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHH
Confidence 99999999999999999999988888888899999999999999999999999999999999999998875 45 99999
Q ss_pred HhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhH
Q 009250 248 YIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (539)
++.++..++..+... +++|+++. ++.+ + +...+.++.++++..+.
T Consensus 165 ~~~~~~~~i~~i~~~~~~~~~~~~----~~~~--------------------~----------~~~~~~~~~~~~~~~~~ 210 (395)
T PRK10054 165 WLAAICSAFPLVFIQIWVQRSEKA----IATE--------------------T----------GSVWSPSVLLQDKALLW 210 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc----cccc--------------------h----------hhhhhhhhhccCceehH
Confidence 998887777654443 34443210 0000 0 00011244566666655
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHH
Q 009250 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGM 406 (539)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 406 (539)
..+...+..+...........+.+.. ++.+.+. ...+.......+... ......|++.||.++|+.+..+..+.
T Consensus 211 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~l~~~~~~~ 284 (395)
T PRK10054 211 FTCSGFLASFVSGAFASCISQYVMVV-ADSDFAE-KVVAVVLPVNAAMVV----SLQYSVGRRLNAANIRPLMTAGTLCF 284 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHh-cccchHH-HHHHHHHHhhhhhee----eehhHHHHHHccCCchhHHHHHHHHH
Confidence 44433333222111111112222211 2222222 233344444333332 22678899999999999888887777
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHH
Q 009250 407 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 485 (539)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 485 (539)
.++...+... .+..+.+.......+.+.+. .|.....+.+..|++.++++.+..+ ...+|..++|.+.|
T Consensus 285 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 285 VIGLVGFIFS---------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSG 354 (395)
T ss_pred HHHHHHHHHc---------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHH
Confidence 7766555431 11122222222233333222 4556677888899999999998755 67799999999999
Q ss_pred HHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 486 DLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 486 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
.+.|+.|+...|++.+.+..++.++..
T Consensus 355 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 355 VILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 999999988888887776666665554
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.5e-29 Score=248.30 Aligned_cols=361 Identities=17% Similarity=0.167 Sum_probs=236.9
Q ss_pred hhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHH--H---HHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH
Q 009250 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSI--F---IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (539)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~---~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (539)
+.+.++...++...+.+.+++..+.++.+.+.+.+. + .++..+++++.|+++||+|||+++..+.++..++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 456777788888888888886543355655655443 3 33334689999999999999999999999999999999
Q ss_pred HhhhcHH--------HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC------
Q 009250 172 AQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------ 237 (539)
Q Consensus 172 ~~a~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~------ 237 (539)
+++++++ .++++|+++|++.+...+...+++.|++++++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999876 47889999999999999999999999999999999999999999999999988765442
Q ss_pred --CCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh
Q 009250 238 --DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (539)
Q Consensus 238 --~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (539)
+..+ ||+.|++.+++.++..+.....+|+|++..+ ++++++.+.+.
T Consensus 163 ~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~ 210 (394)
T TIGR00883 163 ALLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKA-------------------------------QEKHKKKRGPI 210 (394)
T ss_pred Hhhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHH-------------------------------HhccccccCCH
Confidence 2345 9999998887776665555556665532100 00111112334
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
++.++++... ......... ...........+.|.+. ++.+.+.. ..+.......+...++ .++.|++.||++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g 283 (394)
T TIGR00883 211 RETLTKHRKP-FLLGLGLVI-ATTTTFYLITTYLPTYLTQTLGLSAN-SALLVLMLSLILFFIT----IPLSGALSDRIG 283 (394)
T ss_pred HHHHHhchHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCChh-HHHHHHHHHHHHHHHH----HHHHHHHHHHhc
Confidence 4555544311 222222222 22223444555667776 44455443 4444444444444333 899999999999
Q ss_pred CchhhHhhHHHHHHHH-HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHH-HH
Q 009250 395 RQKLLIGSYLGMAISM-LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSF-SV 472 (539)
Q Consensus 395 ~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~ 472 (539)
||+.+.....+..+.. ..+..... ....+.......+...+.+ ...+...++..|.+|++.|+++.++.+ ..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 357 (394)
T TIGR00883 284 RRPVLIIFTVLAALLAVPLLMALLD-----SGSFTLFFFLVLGLALIGG-MYTGPMGSFLPELFPTEVRYTGASLAYNLA 357 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-----CCchHHHHHHHHHHHHHHH-HHhhhHHHHHHHhCCccceeeEeeehhHhH
Confidence 9997765544443322 22221110 0011112222222222222 234556688899999999999999854 44
Q ss_pred HHHHHHHHHHHHHHHHHHhC-cchhhHHHHH
Q 009250 473 HWVCNFLVGLFFLDLVETFG-VAPVYAGFGG 502 (539)
Q Consensus 473 ~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~ 502 (539)
..+|..++|.+.|.+.++.| +...++....
T Consensus 358 ~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 358 GAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 56788899999999999988 5555444443
No 64
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.3e-29 Score=247.13 Aligned_cols=360 Identities=14% Similarity=0.081 Sum_probs=247.0
Q ss_pred HHHhhhhhcccccchhHH-HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 172 (539)
...++.........+.++ .+.+++|+ +..+.|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 444555555555566665 46788999 999999999999999999999999999999999999999999999999999
Q ss_pred hhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHH
Q 009250 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASL 252 (539)
Q Consensus 173 ~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~ 252 (539)
++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++. ..+ ||+.|++.++
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~ 172 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAV 172 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHH
Confidence 99999999999999999999889999999999999999999999999999999999999999988 556 9999999887
Q ss_pred HHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHH
Q 009250 253 PGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (539)
Q Consensus 253 ~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (539)
..++..++. ++.||.+. .+ ..++.+..+++.++++..+...+..
T Consensus 173 ~~~~~~i~~~~~~~~~~~-----~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
T PRK11646 173 LFVLAAAFNAWLLPAYKL-----ST------------------------------VRTPVREGMTRVLRDKRFVTYVLTL 217 (400)
T ss_pred HHHHHHHHHHHhCCcccc-----cc------------------------------cchhhHHHHHHHHcCchHHHHHHHH
Confidence 776655443 33443210 00 0000112345556666544333222
Q ss_pred HHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHh-hhcCCchhhHhhHHHHHHHH
Q 009250 332 ALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLM-DKEGRQKLLIGSYLGMAISM 410 (539)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~-dr~g~r~~~~~~~~~~~~~~ 410 (539)
..... .......+.|.+.++.+..+. ..+....+..+.+..+ ....+++. ||++.++.+..+..+.+++.
T Consensus 218 ~~~~~----~~~~~~~~~p~~~~~~~~~~~-~~g~l~~~~~~~~~~~----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 218 TGYYM----LAVQVMLMLPIMVNDIAGSPS-AVKWMYAIEACLSLTL----LYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHH----HHHHHHHhhhhhHHhhcCCch-HHHHHHHHHHHHHHHH----HHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 22111 122234466777777655443 4444444433332111 33344444 45665666666666666665
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009250 411 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~ 490 (539)
+++.... +.+.......++..+.+ ...|...++..+..|++++|++.|+.+....+|..++|.+.|.+.|+
T Consensus 289 ~~l~~~~--------~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 289 FPIGMVS--------NLQQLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHhh--------hHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 5554321 11222222222222222 22355567788999999999999999999999999999999999987
Q ss_pred hC----cchhhHHHHHHHHHHHHh
Q 009250 491 FG----VAPVYAGFGGVSLLSALF 510 (539)
Q Consensus 491 ~g----~~~~~~~~~~~~~~~~~~ 510 (539)
.+ ....+...+++.++..+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHH
Confidence 53 234444444444444433
No 65
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.3e-30 Score=252.17 Aligned_cols=365 Identities=19% Similarity=0.202 Sum_probs=263.2
Q ss_pred HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh--cHHHHHHHHHHhhhch
Q 009250 114 AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGI 191 (539)
Q Consensus 114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~ 191 (539)
..++++ ++.+.+++.+++++|+.+++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||++.
T Consensus 65 ~~~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 346677 888889999999999999999999999999999999999999999999999874 5567899999999999
Q ss_pred hhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC-cchhHHHHHhhHHHHHHHHHHhcc-cccchH
Q 009250 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWWRTMLYIASLPGFILALGMQF-TVESPR 269 (539)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~ 269 (539)
|..+|+...+.+.|.|++||++..++..++..+|.+++.++++++.+. .| |+++|++.++.+++..+++++ ..|+|.
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999998 66 999999999999998877755 556663
Q ss_pred HHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCC--CcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHH
Q 009250 270 WLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSD--LDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLY 347 (539)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (539)
. ++. ..++|.+..++...++..+ .+.+++++++++..|..++..+.... .+..+..
T Consensus 222 ~--h~~----------------is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~----~~~~l~~ 279 (466)
T KOG2532|consen 222 K--HPN----------------ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNW----GFYLLLT 279 (466)
T ss_pred c--CCC----------------CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHH----HHHHHHH
Confidence 1 111 1111122222222222222 46789999999887776665544444 5667778
Q ss_pred hHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCc---------hhhHhhHHHHHHHHHHHHHHhc
Q 009250 348 FSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQ---------KLLIGSYLGMAISMLLVVGATS 418 (539)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~~~~~~~~~~ 418 (539)
|.|.|+++.-.-+....+...++..+...+. .+++|.++||+.+| ..-.++....++.++.+.+...
T Consensus 280 y~PtY~~~VL~f~v~~~G~~salP~l~~~~~----k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~ 355 (466)
T KOG2532|consen 280 YLPTYLKEVLGFDVRETGFLSALPFLAMAIV----KFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD 355 (466)
T ss_pred HhhHHHHHHhCCChhhhhHHHHHHHHHHHHH----HHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC
Confidence 8888888764444445556666666655444 89999999998653 1223344444444444443221
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH---HhCcch
Q 009250 419 LPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE---TFGVAP 495 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~---~~g~~~ 495 (539)
...+..+.+..+. .++.....+..+.-..+. .+++.+..+|+.+.+..+.++++|.+.|.+.. ...|+.
T Consensus 356 ------~~~~~a~~~l~~~-~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 356 ------EHRLLAVILLTIA-IGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred ------CcchHHHHHHHHH-HHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 1111222222222 222221222222222232 45679999999999999999999999999884 346899
Q ss_pred hhHHHHHHHHHHHHhhheee
Q 009250 496 VYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~ 515 (539)
.|++.+++.+++.++..++-
T Consensus 428 VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHhchheeEee
Confidence 99999999998887655443
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=1.7e-29 Score=245.65 Aligned_cols=371 Identities=18% Similarity=0.119 Sum_probs=248.5
Q ss_pred HHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 169 (539)
..++++.++..+.........+.+.++++. ++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.+++++
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~ 83 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL 83 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH
Confidence 345666777777665566666777888888 788889999999999999999999999999999999999999999999
Q ss_pred HHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 170 ~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
+++++.+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. . |+..+.+
T Consensus 84 ~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~-~~~~~~i 158 (393)
T PRK11195 84 LMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-H-AEAALAV 158 (393)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHH
Confidence 88887664 77899999999999999999999999999999999999999999999999999998874 3 7777777
Q ss_pred hHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH
Q 009250 250 ASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI 329 (539)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (539)
.+...++..+....+||+|+.. +.+.++... ..++. +..++.+++++..+....
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~-------------~~~~~-----------~~~~~~l~~~~~~~~~~~ 212 (393)
T PRK11195 159 CALIYLLAALFNLFIPRLGARR--PGQSWNPIA-------------LLRDF-----------FHACRVLWRDKLGRFSLA 212 (393)
T ss_pred HHHHHHHHHHHHhcCCCCcccc--cccCCCHHH-------------HHHHH-----------HHHHHHHHhCchhHHHHH
Confidence 7666555555556677765210 000000000 00000 012345566666554433
Q ss_pred HHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 330 GGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
...+... ......+..+.+.++. +.+. ...+.......+...++ .++.+++.||.++++.+..+.. .++
T Consensus 213 ~~~~~~~----~~~~~~~~~~~~~~~~lg~s~-~~~G~~~~~~~~g~i~g----~~~~~~l~~~~~~~~~~~~g~~-~~~ 282 (393)
T PRK11195 213 GTTLFWG----AGATLRFLVLAWAPVALGITL-NQPAYLQAVVAIGIAVG----AGAAARLVTLETVLRVLPAGIL-MGL 282 (393)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHcCCCh-hHHHHHHHHHHHHHHHH----HHHHHHHhcCCcccchHHHHHH-HHH
Confidence 3222222 1222333444444443 4433 35555555555444333 8889999999888877766643 333
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccc-ccchhhHHHHHHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRT-RGKIMGFSFSVHWVCNFLVGLFFLD 486 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~ 486 (539)
....+.. .+..+......+..+++.+. .+...+...+..|++. +|++.++.+...+++..++..+.+.
T Consensus 283 ~~~~~~~----------~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~ 352 (393)
T PRK11195 283 VVLLMAL----------QHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSL 352 (393)
T ss_pred HHHHHHH----------HhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHH
Confidence 3222222 11122222222222332222 2334455667666554 7999999999999999999999985
Q ss_pred HHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 487 LVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 487 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+ +..|-+..+.+.+...++...+.+.+
T Consensus 353 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 353 L-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred H-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 77887777776665555555544433
No 67
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.9e-29 Score=245.68 Aligned_cols=357 Identities=14% Similarity=0.069 Sum_probs=251.1
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+.++++..++.++..+...+.+|.+++++|+ +..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 5677778888899999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc-----
Q 009250 169 IISAQ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP----- 240 (539)
Q Consensus 169 ~~~~~---a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~----- 240 (539)
+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.++..+....
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 4689999999999999999999999999999999999999999999999999999998887653210
Q ss_pred --------------------chhHHHHHhhHHHHHHHHHHhcc--cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHH
Q 009250 241 --------------------HWWRTMLYIASLPGFILALGMQF--TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIE 298 (539)
Q Consensus 241 --------------------~~wr~~f~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (539)
.+||++|++.+++.++..++..+ .|+.++ +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--------~-------------------- 214 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH--------S-------------------- 214 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------c--------------------
Confidence 13999999988877766544433 232110 0
Q ss_pred HHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCC-hhHHHHHHHHHHHhcccc
Q 009250 299 EFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT-DGALASLLVGVTNFAGLR 377 (539)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i 377 (539)
++++.......+++++++..+...+..+++... ......+.+.+.++.+.. +................+
T Consensus 215 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~----e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~v 284 (410)
T TIGR00885 215 ------DAKQISFSASLSRLARIRHYREGVIAQFFYVGV----QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFI 284 (410)
T ss_pred ------ccccccchhhHHHHHhChhHHHHHHHHHHHHHH----HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 000001112334556666655544443343332 223334555665554322 222222222222222222
Q ss_pred cccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccccc
Q 009250 378 SEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELS 457 (539)
Q Consensus 378 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (539)
| +++++++.||+++|+.+.+..++..+..++.... +....... +.....+....+|..++...+..
T Consensus 285 G----R~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~---------~~~~~~~~-l~~~glf~s~~fp~i~sl~~~~~ 350 (410)
T TIGR00885 285 S----RFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA---------GGHVGLYC-LTLCSAFMSLMFPTIYGIALKGL 350 (410)
T ss_pred H----HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHHHHH-HHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 9999999999999998887777777666665542 11222222 22333334444578888888888
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh------CcchhhHHHH
Q 009250 458 SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF------GVAPVYAGFG 501 (539)
Q Consensus 458 p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~------g~~~~~~~~~ 501 (539)
+++.+..+.++... .+|+++.|.+.|.+.|.. +++..|.+..
T Consensus 351 g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 351 GQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred hhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 87755445554443 399999999999999964 3656665433
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=2.7e-29 Score=250.34 Aligned_cols=375 Identities=14% Similarity=0.114 Sum_probs=253.9
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-----cchHH-HHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRT-FQIDTIPL 164 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~ 164 (539)
.+.+..+..++......+.+|...++.|. +..++|.+ +.....+ ++.+++|+++||+ |||+. ++.+.++.
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 34444456666777888889999999888 77777876 4444444 6899999999999 99885 66777777
Q ss_pred HHHHHHHHhh---hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC-Cc
Q 009250 165 ILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DP 240 (539)
Q Consensus 165 ~~~~~~~~~a---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~~ 240 (539)
+++..++++. ++++.+.+.+++.|++.+...+...+++.|++|++||+++.++...+..+|.++++.++.++.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7887777775 4788899999999999999999999999999999999999999999999999999999988887 45
Q ss_pred chhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhc
Q 009250 241 HWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLE 320 (539)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (539)
+ ||..|++.+++.++..+..++.+|+++.. .+.++ . ++....+++++++
T Consensus 172 G-Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~----------------~-----------~~~~~~~l~~~~~ 220 (491)
T PRK11010 172 G-WQGMYWLMAALLIPCIIATLLAPEPTDTI---PVPKT----------------L-----------EQAVVAPLRDFFG 220 (491)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccc----------------h-----------hhhHHHHHHHHHc
Confidence 6 99999999988777766666667654210 00000 0 0000123455665
Q ss_pred cCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHH-HHHHhcccccccchhhhHHHHhhhcCCchhh
Q 009250 321 EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLV-GVTNFAGLRSEKYCALCASYLMDKEGRQKLL 399 (539)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~ 399 (539)
++..+.......+.... ......+..+++.+..+.+.. ..+... ....+...++ .+++|+++||+++|+.+
T Consensus 221 ~~~~~~~ll~~~l~~~~---~~~~~~~~~~~l~~~~G~s~~-~~g~~~~~~g~i~~iiG----~ll~G~L~dr~g~~~~l 292 (491)
T PRK11010 221 RNNAWLILLLIVLYKLG---DAFAMSLTTTFLIRGVGFDAG-EVGLVNKTLGLLATIVG----ALYGGILMQRLSLFRAL 292 (491)
T ss_pred CcCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHH----HHHHHHHHHHHhHHHHH
Confidence 55554443333222221 122223344444455676655 344433 2333333233 99999999999998877
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHH-HHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHH
Q 009250 400 IGSYLGMAISMLLVVGATSLPLDEDFSHNLSIL-GTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNF 478 (539)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 478 (539)
.++.++..+..+.+....... .+...+. ..++.....+.+. +...++..+..+++.+++..|+.+....+|..
T Consensus 293 ~i~~~l~~l~~l~~~~l~~~~-----~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~ 366 (491)
T PRK11010 293 MIFGILQGVSNAGYWLLSITD-----KNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRV 366 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence 766555554443332211100 1111111 1222111122222 23456677888998999999999999999999
Q ss_pred HHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 479 LVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 479 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+++.+.|.+.|..||...|.+.+++.+.+.++....
T Consensus 367 ~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 367 YVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888887776665443
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.5e-29 Score=246.33 Aligned_cols=335 Identities=14% Similarity=0.195 Sum_probs=228.0
Q ss_pred hcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHH
Q 009250 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (539)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (539)
+....+.|.+|.+.+++|+ ++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 4456677899999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009250 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (539)
Q Consensus 181 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (539)
++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.+++.++..+.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998888777 999999988887766544
Q ss_pred h-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhh
Q 009250 261 M-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQF 339 (539)
Q Consensus 261 ~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (539)
. ++.+|+++. .+++ +.+. ++....+++.++++..+...+...+. +
T Consensus 162 ~~~~~~~~~~~----~~~~-----------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 207 (377)
T PRK11102 162 VFFFIPETLPK----ERRQ-----------PFHL---------------RTTIRNFASLFRHKRVLGYMLASGFS----F 207 (377)
T ss_pred HHHhCCccCcc----cccC-----------CCCh---------------HHHHHHHHHHHcChHHHHHHHHHHHH----H
Confidence 4 445664310 0000 0000 00011234455555444333222211 1
Q ss_pred hhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhc
Q 009250 340 AGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATS 418 (539)
Q Consensus 340 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 418 (539)
........+.|.++ +..+.+.. ..+.......+...++ .++.+++.||+|+|+.+..+..+..+..+.+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQ-NFGYYFALNIVFLFVM----TIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSAL 282 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222333334444 44565543 5555555555554333 999999999999999888777665444333322111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHH-HHHHHHHHH
Q 009250 419 LPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHW-VCNFLVGLF 483 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~ 483 (539)
.. ...+........+..+.+. ..+.......|..| +.++++.++.+.... ++..+++.+
T Consensus 283 ~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 283 LD----LGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred Hh----hhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0111122222222222221 22233345567666 679999999877654 445555544
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=9.3e-29 Score=241.95 Aligned_cols=353 Identities=15% Similarity=0.114 Sum_probs=239.1
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
.++.+.++.+..++..+......|.+|.+.+++|. ++.+.+++.+++.+++.++++++|+++||+|||+++..+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 44556666666667777888888999999999999 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
.++.+++.++++++.+++.|++.|++.+...+....+..|++++++|+++.++...+..+|..++|.+++.+.+..+ ||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99999999999999999999999999998888888999999999999999999999999999999999998888777 99
Q ss_pred HHHHhhHHHHHHHHHH-hcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 245 TMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 245 ~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
+.|++.++..++..+. .++.||+++.. + + +++.+..+++.++++.
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----------------------------~~~~~~~~~~~~~~~~ 208 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPAD----A-R-----------------------------RTRVLASYRTLLSNRR 208 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCccc----c-c-----------------------------hhHHHHHHHHHHcChH
Confidence 9999988776655443 34566654200 0 0 0001123445556655
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhh
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGS 402 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~ 402 (539)
.+...+....... .......+.+.++++ .+.+.. ..+.......+.. +++..+.+++.||.+++.. ..
T Consensus 209 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~----~~g~~~~~~l~~~~~~~~~--~~ 277 (394)
T PRK11652 209 FNCYLLMLIGTLA----GIAVFEACSGVLMGAVLGLSSM-TVSILFILPIPAA----FFGAWFAGRPNKRFSTLMW--QS 277 (394)
T ss_pred HHHHHHHHHHHHH----HHHHHHHhChHHHHHHcCCCHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH--HH
Confidence 5543332222211 222333344555555 455443 3344333322222 2227777888888773222 22
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 403 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
.....++.+.+....... ....+.......+...+.+. ..+....+..|..|+ ++|++.++.+....+|+.+++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 278 VICCLLAGLLMWIPGWFG---VMNVWTLLVPAALFFFGAGM-LFPLATSGAMEPFPY-LAGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred HHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHH
Confidence 222222222221111000 00112222222222222222 345556667787774 6899999999999999999999
Q ss_pred HHHHHHHH
Q 009250 483 FFLDLVET 490 (539)
Q Consensus 483 ~~~~l~~~ 490 (539)
+.+.+...
T Consensus 353 ~~~~~~~~ 360 (394)
T PRK11652 353 LSAMLPQT 360 (394)
T ss_pred HHHHccCC
Confidence 88876543
No 71
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.6e-30 Score=248.08 Aligned_cols=374 Identities=17% Similarity=0.151 Sum_probs=244.0
Q ss_pred HHHHHHHHHHHhhhhhccccc-chhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVM-NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
+.++..+++.++....+...+ .+.+..+.+|.+. ...+.+++.++|+++++++++++|.|.||++..+.+....+++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 344555566666666655333 3333445688887 7778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC------C
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------D 238 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~------~ 238 (539)
++..++.....|++.+++.|++.|+.++..+|....+++.||.++||+..++++.+..++|.++|++++..+. .
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 9999999889999999999999999999999999999999999999999999999999999999999998853 2
Q ss_pred CcchhHHHHHhhHHHHHHHHHHh-cccccchHH--HHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhc--CCCCcc
Q 009250 239 DPHWWRTMLYIASLPGFILALGM-QFTVESPRW--LCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKD--GSDLDS 313 (539)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 313 (539)
..+ |||.|++.++++++..++. +++|+.|.- ...+.+.+- ..++.++..... ++.++.
T Consensus 202 ~~g-W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~----------------~~~~~~~~~~~~~~~~~~~~ 264 (495)
T KOG2533|consen 202 LAG-WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKEL----------------VVERLRESPSGGIENKFKWK 264 (495)
T ss_pred cCC-ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHH----------------HHHHHHhccCCCcccccCHH
Confidence 344 9999999999999887665 458888841 110000000 001111111111 113455
Q ss_pred hhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh
Q 009250 314 QWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK 392 (539)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr 392 (539)
.+++.++++..|...+..++... ..+.+.+++|.++++. +.+.. .+..+.....+.++++ .+++|+++||
T Consensus 265 ~~~~a~~dp~vw~~~l~~~~~~l----v~~~~~~~lpl~l~~~~~~s~~-~a~~ls~~~~~~g~v~----~i~ag~lsdr 335 (495)
T KOG2533|consen 265 GFKEALKDPGVWPFSLCYFFLKL----VNYGFSYWLPLYLKSNGGYSEL-QANLLSTPYDVGGIVG----LILAGYLSDR 335 (495)
T ss_pred HHHHHHhchhHHHHHHHHHHHhh----ccccHHHHHHHHHHcCCCcChH-HhccccchHHhhhHHH----HHHHHHHHHH
Confidence 67778888877766554444444 4556778888888883 24332 4444444444444333 9999999999
Q ss_pred ----cCCchhhHhhHHHHHHHH-HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcc-cccch
Q 009250 393 ----EGRQKLLIGSYLGMAISM-LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNR-TRGKI 465 (539)
Q Consensus 393 ----~g~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~-~~~~~ 465 (539)
..+|........+..+.. ..+.. ..........++.+.++.. ..+......++....+ .+-+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~g~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~ 405 (495)
T KOG2533|consen 336 LKTIFARRLLFIVFLCLYAIIGAISLLA----------AAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTT 405 (495)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHh----------hccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHH
Confidence 445555544444443333 33322 1111122222222222222 2334445555544443 34444
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHhCcchhh
Q 009250 466 MGFSFSVHWVCNFLVGLFFLD-LVETFGVAPVY 497 (539)
Q Consensus 466 ~g~~~~~~~~g~~~~~~~~~~-l~~~~g~~~~~ 497 (539)
.+........+++++|.+.-. ....+++...|
T Consensus 406 ~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 406 VSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred HhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 455555555555555554433 22335666666
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=5.3e-28 Score=235.86 Aligned_cols=362 Identities=13% Similarity=0.088 Sum_probs=231.3
Q ss_pred HHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHH-HHHHHHhhhhhhhhhhcchHHH-HHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTF-QIDTIPLILG 167 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~ 167 (539)
...+..++..+......|.+|. +.+++|+ +..++|++.+.+.+ ++.+++++.|+ +||+||||.+ ..+.++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~ 95 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLA 95 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHH
Confidence 3444466677777777787765 6788999 88899999876655 55566655555 9999999875 5566667788
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccc--cchhhhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG--SLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 245 (539)
..+.+++++++.+++.+.+.|...+...+...+++.|+.++++|. ...++.+.+.++|.+++|++++.+.++.+ ||.
T Consensus 96 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~ 174 (393)
T PRK15011 96 CTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTV 174 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHH
Confidence 888889999999877665555555677888888888888766553 44578888999999999999999988878 999
Q ss_pred HHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc-
Q 009250 246 MLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH- 323 (539)
Q Consensus 246 ~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 323 (539)
.|++.++..++..+.. .++||.++. +. ++ +++ .+...++++
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~-------------------------~~~-------~~~~~~~~~~ 217 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMRKE---LP--LA-------------------------TGT-------LEAPRRNRRD 217 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCCC---Cc--cc-------------------------ccc-------cccccccccc
Confidence 9999988777666554 446665410 00 00 000 000011111
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhh
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGS 402 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~ 402 (539)
.+..+...... +..+.....+.|.+.++ .+.+.. ..+...+...+...++ .++.|+++||++||+.+..+
T Consensus 218 ~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~~~~~~-~~g~~~~~~~~~~i~~----~~~~G~l~dr~g~~~~~~~~ 288 (393)
T PRK15011 218 TLLLFVICTLM----WGTNSLYIINMPLFIINELHLPEK-LAGVMMGTAAGLEIPT----MLIAGYFAKRLGKRFLMRVA 288 (393)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhChHHHHHHH
Confidence 11111111111 11233344456666644 455543 4444444443333222 89999999999999877766
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 403 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
.....+....+.. . .+.+..+....+...+.+.. .+....+..|..|++ ++++.++.+...++|..++|.
T Consensus 289 ~~~~~~~~~~~~~-~-------~~~~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~ 358 (393)
T PRK15011 289 AVAGVCFYAGMLM-A-------HSPAILLGLQLLNAIYIGIL-GGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGS 358 (393)
T ss_pred HHHHHHHHHHHHH-H-------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHH
Confidence 5544443332221 1 01121222112111222211 122335567888865 999999999999999999999
Q ss_pred HHHHHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 483 FFLDLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 483 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
+.|.+.+..|++..+.+.+++.+++.++.+
T Consensus 359 l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 359 LAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888877777666655443
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=2.2e-28 Score=235.80 Aligned_cols=333 Identities=17% Similarity=0.169 Sum_probs=233.1
Q ss_pred cccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHH
Q 009250 102 HIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEML 181 (539)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 181 (539)
......+.+|.+.+++|+ +..+.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+++ .+++++.++
T Consensus 15 ~~~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred ccccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 336778999999999999 88899999999999999999999999999999999999999998888887 789999999
Q ss_pred HHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch-hHHHHHhhHHHHHHHHHH
Q 009250 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW-WRTMLYIASLPGFILALG 260 (539)
Q Consensus 182 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-wr~~f~~~~~~~~~~~~~ 260 (539)
+.|++.|++.+...+....++.|+++ ++|++++++++.+.++|..+++.+++.+.+..+. ||+.|.+.++..++...
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999999988888889999986 5799999999999999999999988877665433 99999877665444322
Q ss_pred hcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhh
Q 009250 261 MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFA 340 (539)
Q Consensus 261 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (539)
.++++.++ +. +++++..+...++.++++..+...+...+. ..
T Consensus 170 -~~~~~~~~----~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 211 (355)
T TIGR00896 170 -AWIPQVRR----RV-----------------------------AANQTTTRLTPVRIWRSPLAWQVTVFFGLQ----SG 211 (355)
T ss_pred -HHhhhhcc----cc-----------------------------CCCCCCCCCCCchhhcCHhHHHHHHHHHHH----HH
Confidence 22333210 00 000001112344556665544333322222 22
Q ss_pred hhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC-CchhhHhhHHHHHHHHHHHHHHhcC
Q 009250 341 GINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG-RQKLLIGSYLGMAISMLLVVGATSL 419 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~~~~~~ 419 (539)
.+.....+.|.++++.+.+.. ..+....+..+...++ +++.|++.||++ ||+.+..+.++..++.+.+.+..
T Consensus 212 ~~~~~~~~lp~~~~~~g~~~~-~~g~~~~~~~~~~i~~----~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-- 284 (355)
T TIGR00896 212 LYYSLIGWLPAILISHGASAA-TAGSLLALMQLAQAAS----ALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-- 284 (355)
T ss_pred HHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh--
Confidence 334455677888877766543 4455555555554333 999999999994 56666666666666665554421
Q ss_pred CCCccchhhHHHHHHHHHHHHHhccc-ccccccccc-cccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 009250 420 PLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIP-ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGV 493 (539)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~ 493 (539)
.+.... ...+ .+++.+. .+....... +..+++.++...++.+.+.+++.+++|.+.|.+.|+.|.
T Consensus 285 ------~~~~~~-~~~l--~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 285 ------MHGLWA-WALV--LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred ------hhHHHH-HHHH--HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111111 2222 2333322 343334443 334456678999999999999999999999999998873
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=3.3e-28 Score=236.34 Aligned_cols=361 Identities=14% Similarity=0.047 Sum_probs=253.9
Q ss_pred HHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHH----HHHHHHHHHH
Q 009250 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF----QIDTIPLILG 167 (539)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~ 167 (539)
+.+.++...+...+..|.+|.+.+++|. +..++|++.+++.+...++++++|+++||+||++.. ..+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 4556667777778889999999999999 999999999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
..+.++++++.+++.|+++|.+.+...|...++..++ +++|+++.+....+.++|.+++|++++.+.+..+ ||..|
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f 161 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL 161 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence 2445788999999999999999988899988887665 4679999999999999999999999999999888 99999
Q ss_pred HhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHH
Q 009250 248 YIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (539)
++.++..++..+ .+.++|+++ +++.+ ++++.......+++++++..+..
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~--------------------------~~~~~~~~~~~~~~l~~~~~~~~ 210 (382)
T TIGR00902 162 AILTAGLAFMLI-GFLIKPTIP----PKDAI--------------------------PEDESQGDSAFIALLKNPMNLRF 210 (382)
T ss_pred HHHHHHHHHHHH-HHHcCCCCC----CCccc--------------------------cccccccchhHHHHHcChHHHHH
Confidence 887655333333 223333320 00000 00000112245677777776665
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
.+...+... .......+.+.+.++.+.+.. ..+...++..+.. +++.++.+++.||+++|+.+.++.+...
T Consensus 211 l~~~~l~~~----~~~~~~~~~~~~l~~~g~s~~-~~g~l~~~~~~~~----i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 211 LAAVCLIQG----AHAAYYGFSAIYWQAAGISAS-ATGLLWGIGVLAE----IIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHCCCCHh-HHHHHHHHHHHHH----HHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 554444333 333444466777777777654 4455544444443 3338899999999999999999998888
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHH-HHHHHHHHHHHHHHH
Q 009250 408 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFS-VHWVCNFLVGLFFLD 486 (539)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~~~ 486 (539)
+....+.... +.+..+....+....++.. .+....++.+. |++.++++.++++. ...+|..++|.+.|.
T Consensus 282 ~~~~~~~~~~--------~~~~~~~~q~l~g~~~~~~-~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 282 GRWAIIGAIE--------AFPLIFLLQILHCGTFAVC-HLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHhHh--------hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877775521 2222333334444444332 33345667777 88889999999874 556899999999999
Q ss_pred HHHHhCcchhhHHHHHHHHHHHHh
Q 009250 487 LVETFGVAPVYAGFGGVSLLSALF 510 (539)
Q Consensus 487 l~~~~g~~~~~~~~~~~~~~~~~~ 510 (539)
+.|+.|+ ..|++.+++.+++.++
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 352 IYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999986 6677777777665443
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=9.2e-29 Score=239.96 Aligned_cols=347 Identities=19% Similarity=0.193 Sum_probs=225.3
Q ss_pred HHHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+..+++.++.........+..|. +++++|+ ++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 44666666777777888899995 9999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC---------
Q 009250 169 IISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED--------- 238 (539)
Q Consensus 169 ~~~~~a~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------- 238 (539)
+++++++ +++.+++.|+++|++.+ ..+....++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999 99999999999999866 456678899999999999999999987777777777666654432
Q ss_pred -CcchhHHHH-HhhHHHHHHHH-HHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchh
Q 009250 239 -DPHWWRTML-YIASLPGFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (539)
Q Consensus 239 -~~~~wr~~f-~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (539)
..+ ||+.| +..+++.++.. +...+.+|+|+. +. ++.+.. ..... ....++.....
T Consensus 161 ~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~---~~~~~-------------~~~~~~~~~~~ 218 (366)
T TIGR00886 161 AHLA-WGWAFVIVPAGILLLPALLIFFVGADTPPG---KP--ATGKLS---FKGAR-------------WSVGTGALGDQ 218 (366)
T ss_pred cccc-ccchhHHHHHHHHHHHHHHHHHhcccCCcc---cc--cchhcc---ccccc-------------ccccchhHHHH
Confidence 235 99999 44344444433 333445665421 00 000000 00000 00000001133
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
.+.++++..+...+....... .......+.+.++++. +.+.. ..+....+..+.+.++ +++.|++.||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~----~~~~g~l~~r~g 289 (366)
T TIGR00886 219 LKVFRDRHTWILALLYSVTFG----SFLGVSSIFAMFFKDQFGLSKV-TAGAYASLGGLLGSLA----RPLGGAISDRLG 289 (366)
T ss_pred HHHHhccchhhHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHHH----hhccchHHHhhc
Confidence 455666655544333222222 2334445566666544 54443 4444444444444333 899999999999
Q ss_pred CchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHH
Q 009250 395 RQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHW 474 (539)
Q Consensus 395 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 474 (539)
+|+.+..+......+..++..... +............+.....+.+ .+..+....+..| +++|++.|+.+.+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 363 (366)
T TIGR00886 290 GARKLLMSFLGVAMGAFLVVLGLV----SPLSLAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGN 363 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCC----CcchHHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhcc
Confidence 998777776666555555443211 0001111122222222222322 2345567778877 579999999998877
Q ss_pred HH
Q 009250 475 VC 476 (539)
Q Consensus 475 ~g 476 (539)
+|
T Consensus 364 ~g 365 (366)
T TIGR00886 364 LG 365 (366)
T ss_pred CC
Confidence 65
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=4.5e-28 Score=238.85 Aligned_cols=381 Identities=15% Similarity=0.040 Sum_probs=229.0
Q ss_pred HHHHHHhhhhhcccccchhHHHH-HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 169 (539)
.+.+..++..+......+.+|.. .+++|+ ++.+.|++.+++.++..++++++|+++||+|||++++++..+.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGL--SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33344455555555566666654 555899 999999999999999999999999999999999999887766655443
Q ss_pred HHH---hhhc-----HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc
Q 009250 170 ISA---QAHS-----LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (539)
Q Consensus 170 ~~~---~a~~-----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 241 (539)
... .++. +...++++++.|.+.....+....+..+ . .+++++.++......++|..+++++++.+.+. +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~ 168 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N 168 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C
Confidence 221 1111 1112233444444333333333333322 2 34578888999999999999999999988764 5
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhcc
Q 009250 242 WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (539)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (539)
|++.|++.+++.++..++.++.+++++..... .++ +.+++++.......+.+++
T Consensus 169 -~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------------~~~~~~~~~~~~~~~~l~~ 222 (420)
T PRK09528 169 -PQINFWLGSGSALILLVLLFFAKPDAPSTAKV--ANA-----------------------LGANASAVSLKDALALLKL 222 (420)
T ss_pred -chHhHHHHHHHHHHHHHHHhcccccccchhhh--ccc-----------------------hhcccccccHHHHHHHccC
Confidence 99999998888877766665544332100000 000 0000011111233456666
Q ss_pred CchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHh
Q 009250 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIG 401 (539)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~ 401 (539)
+..+...+..................+...+..+.+.+ ....+.+.++..+...++ .++.|++.||+++|+.+..
T Consensus 223 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~----~~~~g~l~dr~g~~~~~~~ 297 (420)
T PRK09528 223 PKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQG-TRVFGYLNSFQVFLEALI----MFFAPFIINRIGAKNALLL 297 (420)
T ss_pred CCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCcchhhHH
Confidence 66554433222222211111111222222222222222 224444444444433333 8999999999999999888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhH-HHHHHHHHHHH
Q 009250 402 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGF-SFSVHWVCNFL 479 (539)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~ 479 (539)
+.++..+..+++.+.. +.+.......+ .+...+. .+....+..|..|++.+++..+. .+....+|.++
T Consensus 298 ~~~l~~~~~~l~~~~~--------~~~~~~~~~~l--~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 298 AGTIMAVRIIGSGFAT--------GPLEVSILKLL--HAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred HHHHHHHHHHHHHhcc--------cHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH
Confidence 8887777766655421 11222222222 2222222 23344667788899989888766 67778899999
Q ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeC
Q 009250 480 VGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 480 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
+|.+.|.+.|..||+..|.+.+++.++..++.+...++
T Consensus 368 g~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 368 LSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998888877776665554443
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=7.5e-28 Score=235.54 Aligned_cols=376 Identities=14% Similarity=0.076 Sum_probs=243.8
Q ss_pred HHHHHhhhhhcccccch-hHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcc-hHHHHHHHHHHHHHHH
Q 009250 92 ASMSNFLFGYHIGVMNG-PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIPLILGAI 169 (539)
Q Consensus 92 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~ 169 (539)
+++..+.......+..| ..+.+.+++|+ +..++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHF--SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 34445555556666544 44567778899 89999999999999999999999999999965 7888889999989999
Q ss_pred HHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhc--------CCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc
Q 009250 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEV--------APTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (539)
Q Consensus 170 ~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 241 (539)
++.+.++++.+++.|++.|++.+...+...++..++ .....|.+..| .+|.++++.+++.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 999999999999999999998877777666554322 22233455554 3677777777776633333
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhcc
Q 009250 242 WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (539)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (539)
|+. |++.++..++..++.+++||+|+. +.+++. +. ++ ..+...++++++
T Consensus 159 -~~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~-------------------~~----~~---~~~~~~~~~~k~ 207 (418)
T TIGR00889 159 -NIQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKM-------------------SI----KV---MLGLDAFILFKN 207 (418)
T ss_pred -hHH-HHHHHHHHHHHHHHHhcCCCCCCC---cccccc-------------------CH----HH---HhhhhHHHHhcC
Confidence 554 555565555555556677776520 000000 00 00 001123456666
Q ss_pred CchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCCh-------hHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITD-------GALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
+.++..++..++... .......+.+.+.++.+.+. ....+...++..+...++ .+..|++.||+|
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~----~~~~g~l~dr~g 279 (418)
T TIGR00889 208 KRMAIFFFFSMLLGA----PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFF----ILTIPFFLKRFG 279 (418)
T ss_pred CCeeeHHHHHHHHHh----HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHH----HHHHHHHHHHhC
Confidence 665554444333322 12223344566666655332 123344444444444333 899999999999
Q ss_pred CchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHH-HH
Q 009250 395 RQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSF-SV 472 (539)
Q Consensus 395 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~-~~ 472 (539)
+|+.+..+.++..+...++..... ............+..+.+.+ ..+....++.|.+|++.|+++.|+.+ ..
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~~~~------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~ 353 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAYGDP------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMC 353 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCc------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 999999998888777655544110 01111212222222222222 23445567889999999999999997 56
Q ss_pred HHHHHHHHHHHHHHHHHHh------CcchhhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 473 HWVCNFLVGLFFLDLVETF------GVAPVYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 473 ~~~g~~~~~~~~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
..+|.+++|.+.|.+.++. ||+..|.+.+++.++..++.+++.+++++
T Consensus 354 ~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 354 NGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 7899999999999999984 47788888888888887777777776543
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.7e-29 Score=225.23 Aligned_cols=345 Identities=16% Similarity=0.091 Sum_probs=239.0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhH
Q 009250 119 FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLV 198 (539)
Q Consensus 119 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~ 198 (539)
.+.++.++|++.+++.+...+.+++.|.+.||+|+|..+++|++++..+++++++.++|+.++++|.+||+|.++..+++
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 34467789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCC-ccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCCh
Q 009250 199 PIYISEVAPTK-YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGML 277 (539)
Q Consensus 199 ~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 277 (539)
.++++|.+|++ +|++++|+.-.+.++|.++||++|+.+.+..| .+.+|++.+++.++-..+.+++.|+.+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~-------- 251 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPTE-------- 251 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCccc--------
Confidence 99999999965 47999999999999999999999999999999 999999999999999888877665421
Q ss_pred hHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcC
Q 009250 278 NDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG 357 (539)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (539)
.+++...+..+++++++.+..+.... ...+.+.+ .....-..+.++.+.-
T Consensus 252 --------------------------~~~~~~~~~~~~~~Ll~dP~I~~~ag---ai~~~n~~-lafLePtlslwm~e~m 301 (464)
T KOG3764|consen 252 --------------------------MDPDSTEQGTPMWSLLMDPYILLIAG---AITFSNSS-LAFLEPTLSLWMLETM 301 (464)
T ss_pred --------------------------cCccccccCccHHHHHhCchHhhhhc---chhhccch-HHHhCcccHHHHHHhc
Confidence 01112233345777787776443222 11221111 1111112233333322
Q ss_pred CChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhh--HhhHHHHHHHHHHHHHHhcCCCCccchh-hHHHHHH
Q 009250 358 ITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLL--IGSYLGMAISMLLVVGATSLPLDEDFSH-NLSILGT 434 (539)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 434 (539)
.......++ ..+...++..++..+.|.+.||++..+.+ ..+++..++++....+.. .... +.....+
T Consensus 302 ~~p~w~~G~----~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~------~~~~L~vp~~~l 371 (464)
T KOG3764|consen 302 FTPGWEVGL----AFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT------SIAQLWVPNFGL 371 (464)
T ss_pred cCCCcceee----eecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh------hHHHHhhhhHHH
Confidence 232212222 22233333334499999999999943333 333333333333333321 1111 1111111
Q ss_pred HHHHHHHhcccccccccccccccCcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhh
Q 009250 435 LFYIFTFAIGAGPVTGLVIPELSSNR---TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
.+.+........|.. .+..+....+ .-|.+.++......+|.++||.+.|.+.+..|+.+...+.++..++..-++
T Consensus 372 ~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 372 GFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred HHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHH
Confidence 111111222223433 3333433333 678999999999999999999999999999999998888888887776654
Q ss_pred he
Q 009250 512 YY 513 (539)
Q Consensus 512 ~~ 513 (539)
.+
T Consensus 451 ~l 452 (464)
T KOG3764|consen 451 LL 452 (464)
T ss_pred HH
Confidence 43
No 79
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=6.5e-27 Score=227.46 Aligned_cols=355 Identities=15% Similarity=0.068 Sum_probs=239.4
Q ss_pred HhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcch----HHHHHHHHHHHHHHHHH
Q 009250 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR----RTFQIDTIPLILGAIIS 171 (539)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~ 171 (539)
++...+..+++.|.+|.+.+|+|. +..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 344455668888999999999999 999999999999999999999999999999984 3333222222 22334
Q ss_pred HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009250 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (539)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 251 (539)
..+++++.+++.|++.|++.+...+...+++.++ .++|+++.+......++|..+||++++++.++.+ ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 4568899999999999999998999888888776 3568889999999999999999999999998888 999999877
Q ss_pred HHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHH
Q 009250 252 LPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (539)
Q Consensus 252 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (539)
+..++..+...+.||+++ +++. +++.++...+++++++++..+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~---------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGES---------------------------RQQESAGWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccc---------------------------ccccccccchHHHHHcChhHHHHHHHH
Confidence 655554444334444211 0000 000011124567788887776655544
Q ss_pred HHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHH
Q 009250 332 ALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISML 411 (539)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 411 (539)
.+.... ......+.+.+.++.+.+.. ..+...++..+.. ++..++.+++.||+++|+.+..+.+..++..+
T Consensus 215 ~l~~~~----~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~----~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~ 285 (382)
T PRK11128 215 SLLQGS----HAAYYGFSAIYWQAAGYSAS-TIGYLWSLGVVAE----VLIFAFSNRLFRRWSARDLLLLSAICGVVRWG 285 (382)
T ss_pred HHHHHH----hHhHHHHHHHHHHHCCCCHh-HHHHHHHHHHHHH----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 433332 22333455666677776644 4455545444443 33388999999999999998888887777665
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHH-HHHHHHHHHHHHHHHHHH
Q 009250 412 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSV-HWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~l~~~ 490 (539)
++.... +.+..+...++.+.+++. ..+....+..+. +++++++..++.+.. ..+|..++|.+.|.+.|.
T Consensus 286 ~~~~~~--------~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 286 LMGSTT--------ALPWLIVIQILHCGTFTV-CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred HHHhhh--------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554311 223233333333333332 233444555565 455578888888644 456778999999999999
Q ss_pred hCcchhhHHHHHHHHHHH
Q 009250 491 FGVAPVYAGFGGVSLLSA 508 (539)
Q Consensus 491 ~g~~~~~~~~~~~~~~~~ 508 (539)
.|+ ..++..+++.+++.
T Consensus 356 ~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 356 LGA-GVFWVMALVALPAL 372 (382)
T ss_pred ccH-HHHHHHHHHHHHHH
Confidence 886 45665555555443
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=5e-27 Score=229.88 Aligned_cols=367 Identities=15% Similarity=0.072 Sum_probs=246.4
Q ss_pred HHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-----cchH-HHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRR-TFQIDTIPLILG 167 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~ 167 (539)
..++..++........+|.+.++.|+ +..++|++..+... .+.++++|+++||+ |||| ++..+.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 34566677778888899999999999 99999999777776 59999999999999 8875 788888888888
Q ss_pred HHHHHhh---hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc-chh
Q 009250 168 AIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-HWW 243 (539)
Q Consensus 168 ~~~~~~a---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-~~w 243 (539)
..+.++. .+++.+++..++.++..+...+...+++.|++|++||+++.++...+..+|.++++.++..+.+.. + |
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-W 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-H
Confidence 8888877 357778888888899999999999999999999999999999999999999999999888887754 6 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
|..|++.++..++..+..++.+|+++. +++.++ .. ++.+..++++++++.
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~--------------------~~-------~~~~~~~~~l~~~~~ 210 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRS--------------------LG-------EAVVGPLRDFFSRRG 210 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc---ccccch--------------------hH-------HHHHHHHHHHHhCcC
Confidence 999999888877666655556665421 000000 00 001234566778877
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHH-hcccccccchhhhHHHHhhhcCCchhhHhh
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTN-FAGLRSEKYCALCASYLMDKEGRQKLLIGS 402 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~ 402 (539)
++..++...+....... ...+..+.+.++.+.+.. ..+...+... +...+ +.++++++.||+++|+.+..+
T Consensus 211 ~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~~~~-~~g~~~~~~~~~~~i~----g~~~~g~l~~r~g~~~~l~~~ 282 (402)
T PRK11902 211 AWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGFSAG-EVGIVNKTLGLAATIV----GALAGGTLMVRLGLYRSLMLF 282 (402)
T ss_pred HHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCCCHH-HHHHHHhHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHH
Confidence 76655544333322211 112233445555666654 4444433222 22222 289999999999999887766
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHH--HHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHH
Q 009250 403 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLF--YIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 479 (539)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 479 (539)
..+..+..+.+......+ .+.+.......+ +..+...+ .......++.+.+|. +..++.+.+..++..+
T Consensus 283 ~~~~~l~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~ 354 (402)
T PRK11902 283 GVLQAVSNLGYWVLAVTP----KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA----TQYALLSALASVGRVY 354 (402)
T ss_pred HHHHHHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH----HHHHHHHHHHHHHHHH
Confidence 666555544333211111 011211111111 11122211 123344555555554 4456666677788887
Q ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHhh
Q 009250 480 VGLFFLDLVETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 480 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
++.+.|.+.|..|+...|.+.+.+++++.++.
T Consensus 355 ~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 355 VGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 78899999999999998988887777776554
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=2.2e-26 Score=225.19 Aligned_cols=375 Identities=12% Similarity=0.044 Sum_probs=241.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHH-HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
++.+....++.......+.|.+|.+ .+++|. +..+.|++.+++.++..+++++.|+++||+|||+.++.+....+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4455556666677777777888765 556888 8899999999999999999999999999999999999887776654
Q ss_pred HHHHH---hh-----hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 168 AIISA---QA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 168 ~~~~~---~a-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
..... +. +.+..+++.|++.|++.+...+....+..|.. ++++...+......++|..+++.+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 159 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI 159 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc
Confidence 44321 22 12334566788999988888888888877753 3345677888888899999999999987654
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccc-cchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhh
Q 009250 240 PHWWRTMLYIASLPGFILALGMQFTV-ESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSEL 318 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (539)
+ ||+.|++.+++.++..++.++.. |+|+. ++.. + ..+.++.+.+..+.+++
T Consensus 160 -~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-----------------~--~~~~~~~~~~~~~~~~~ 211 (396)
T TIGR00882 160 -D-PQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVA-----------------N--ALGANASAFSLKLALEL 211 (396)
T ss_pred -C-chHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhh-----------------c--ccccccCCCCHHHHHHH
Confidence 5 99999999888887765554433 33210 0000 0 00000111122345677
Q ss_pred hccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCC---ChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCC
Q 009250 319 LEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGI---TDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGR 395 (539)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~ 395 (539)
++++..+...+....... .+.....+.+.+.++... .+....+....+..+...++ .+..+++.||+++
T Consensus 212 l~~~~~~~~~l~~~~~~~----~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~----~~~~g~l~~r~g~ 283 (396)
T TIGR00882 212 FRQRKFWMFVLYVVGVAC----VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALI----MFCAPLIINRIGA 283 (396)
T ss_pred HcCCcHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH----HHHHHHHHHHhcc
Confidence 777765544332222211 222222233444443321 11223344444444443222 7889999999999
Q ss_pred chhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhH-HHHHHH
Q 009250 396 QKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGF-SFSVHW 474 (539)
Q Consensus 396 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~ 474 (539)
|+.+.++..+.++...+..... +.+.......+...+.... ......+..+..+++.++++.+. .+....
T Consensus 284 ~~~l~~~~~l~~l~~~~~~~~~--------~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~at~~~~~~~~~~~ 354 (396)
T TIGR00882 284 KNALLIAGTIMSVRIIGSSFAT--------TALEVVILKMLHAFEVPFL-LVGCFKYITSQFDVRLSATIYLIGFQFAKQ 354 (396)
T ss_pred chhHHHHHHHHHHHHHHHHhcC--------ChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCcceEEEeehHHHHHHHH
Confidence 9998888877777665544311 1222222222222221111 11233445666788888887776 677889
Q ss_pred HHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 475 VCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 475 ~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
+|+++++.+.|.+.|..|+...|.+.+++.++..+...
T Consensus 355 lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 355 LAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888877766543
No 82
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=3.5e-26 Score=224.06 Aligned_cols=380 Identities=16% Similarity=0.110 Sum_probs=231.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+..+++......+.....+..++.+..|+|- .....|+.+.+.++.+++.++.|+++|.||||.+++.+.++..+|+
T Consensus 46 ~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~---~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~ 122 (599)
T PF06609_consen 46 FAAFSLAVIAAYFVLVLPASILPYINADIGG---SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGS 122 (599)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHhcCC---CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHH
Confidence 3334444444455666667788999999985 4456899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009250 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (539)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 248 (539)
+.++.++|...++++..+.|+|.|.... ....++|..|.|.|+...++......+...+++.++..+..+.+ |||.|+
T Consensus 123 Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~ 200 (599)
T PF06609_consen 123 IVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFY 200 (599)
T ss_pred HHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHH
Confidence 9999999999999999999999886664 45568999999999888877776666666677777776666666 999999
Q ss_pred hhHHHHHHHHHHhcccccchHHHHhcCC---hhHHHHHHHHH------------------cCCcch----HHHHHHH---
Q 009250 249 IASLPGFILALGMQFTVESPRWLCKGGM---LNDAKAVIANL------------------WGESEI----NKAIEEF--- 300 (539)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~------------------~~~~~~----~~~~~~~--- 300 (539)
+.++...+.++..+++..+|++-..+++ ..+..+.++.+ .+.... .......
T Consensus 201 ~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG 280 (599)
T PF06609_consen 201 IFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIG 280 (599)
T ss_pred HHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHH
Confidence 9998877776555444334433322221 12222222221 010000 0000000
Q ss_pred ----H--HHHHhc-CCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCCh-----hHHHHHHH
Q 009250 301 ----Q--LVIKKD-GSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITD-----GALASLLV 368 (539)
Q Consensus 301 ----~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 368 (539)
. .-.+.. ..+.+.-..+++++++. ........+......+....+|......-++.+. ........
T Consensus 281 ~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~--~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~ 358 (599)
T PF06609_consen 281 FVLLVAFVVWEWFGAPKDPLFPHRLFKDRRG--FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPV 358 (599)
T ss_pred HHHHHHHHHhhhhccCCCCcCCHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhH
Confidence 0 001111 11222334456665322 1111112222222122223333333333232221 12233344
Q ss_pred HHHHhcccccccchhhhHHHHhhhcCCch-hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccc
Q 009250 369 GVTNFAGLRSEKYCALCASYLMDKEGRQK-LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGP 447 (539)
Q Consensus 369 ~~~~~~~~i~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (539)
+.....+ .++.|.+..+++|-| .++++.+++.+.+.++.... . .+....+...++.+.+.+....
T Consensus 359 ~fg~~~g-------~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~---~---~n~~~~i~~~~l~g~giG~~~~- 424 (599)
T PF06609_consen 359 GFGSCAG-------AVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR---P---DNKNAAIAFLVLAGFGIGGILV- 424 (599)
T ss_pred HHHHHHH-------HHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc---C---CCcchHHHHHHHHHHhHHHHHH-
Confidence 4444444 788888988887754 44566666555544444321 1 1112222223333333322222
Q ss_pred ccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009250 448 VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 489 (539)
Q Consensus 448 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~ 489 (539)
.......-..|++.-|++.|+..+++.+|+.++..++..+..
T Consensus 425 ~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 425 PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 233455567889999999999999999999999988876553
No 83
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=6.4e-28 Score=236.59 Aligned_cols=401 Identities=17% Similarity=0.165 Sum_probs=275.8
Q ss_pred hHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
.|.+.+...+......-....++...+.++++|+- +..+++|+.++....+.+.+++.+.+.||||.|.+.+.|.++.
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~--s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS--SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVA 121 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC--CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHH
Confidence 34444444444444444445566788999999998 7777899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHH-HHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 165 ILGAIISAQAHSLDEMLWG-RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
+++.++.+|++++|++++. -++.|+|.|..+.....++..||++| |+.+.|+...+.++|.++-|.+...+.+..| |
T Consensus 122 ~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~ 199 (509)
T KOG2504|consen 122 ALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYG-W 199 (509)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhC-c
Confidence 9999999999999998885 79999999999999999999887655 9999999999999999999999999999999 9
Q ss_pred HHHHHhhHHHHHHHHHHhccccc-chHHHHhcCChhHHHHHHHH-----------HcCCcc---hH---HHHHHHHHHHH
Q 009250 244 RTMLYIASLPGFILALGMQFTVE-SPRWLCKGGMLNDAKAVIAN-----------LWGESE---IN---KAIEEFQLVIK 305 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~---~~~~~~~~~~~ 305 (539)
|+.+++.+.+.+-.++....+.+ .++. .+. .++..+.... ...... .+ ......+...+
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPK--KPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCC--Cch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 99999988888766665555433 2110 000 0000000000 000000 00 00000000000
Q ss_pred hcC-CCCcchh----hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhccccccc
Q 009250 306 KDG-SDLDSQW----SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEK 380 (539)
Q Consensus 306 ~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 380 (539)
+.. ...+... .++++++.+....+ .......++.....+++.+....+.++. .+..+.++.++...++
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~----~~~~~~~g~~~p~~~l~~~~~~~g~~~~-~aa~l~Siigi~~i~g-- 349 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLAL----SNLFAYLGFNVPFVYLPSYAKSLGLSSN-DAAFLLSIIGVSDIIG-- 349 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCChh-hhHHHHHHHHHhhhhh--
Confidence 000 0111111 45666654443333 3333333677777888888888888765 4444444444444433
Q ss_pred chhhhHHHHhhhcCC--chhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-ccccccccccc
Q 009250 381 YCALCASYLMDKEGR--QKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELS 457 (539)
Q Consensus 381 ~~~~~~g~l~dr~g~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 457 (539)
+++.|+++|+... +....++.+..+++.+.+.. ......+......+++..+.. ......+.|+.
T Consensus 350 --Ri~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~----------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~ 417 (509)
T KOG2504|consen 350 --RIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF----------ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLV 417 (509)
T ss_pred --hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999874 34455555555555544444 222233444444444444443 34445778999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhh
Q 009250 458 SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 458 p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~ 511 (539)
+.++-..+.|+...+..++..++|++.|.+.|..| |...|...+...+++..+.
T Consensus 418 g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 418 GLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred ChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 99999999999999999999999999999999988 8888888887777776544
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.7e-26 Score=205.76 Aligned_cols=365 Identities=17% Similarity=0.142 Sum_probs=272.0
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
.+..++...++.++......+.+|.+++.|++ +..+++++..+++.||.+.+++.|++.+|+|+|+-++.|+.+++++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 35666667788899999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC-----
Q 009250 168 AIISA---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD----- 239 (539)
Q Consensus 168 ~~~~~---~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~----- 239 (539)
+.+.. -..+|..++++-++.|.|.+...+.++.+++...++++-.+.+++.+..+++|.+++|++++.+..+
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99985 5578999999999999999999999999999999999899999999999999999999999887762
Q ss_pred -------------cchhHHHHHhhHHHHHHHHHHhcc--cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHH
Q 009250 240 -------------PHWWRTMLYIASLPGFILALGMQF--TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVI 304 (539)
Q Consensus 240 -------------~~~wr~~f~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (539)
...||++|...+...++..+.... .|+.+. ..
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------~~ 218 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------AA 218 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc---------------------------------cc
Confidence 112888888887777766665544 333210 00
Q ss_pred HhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchh
Q 009250 305 KKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
.++.+..+....+++++++.+...+..+++...... ...+++.++.+ .+.+. .......+......++| +
T Consensus 219 ~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva----~gsfl~~y~~~~~g~~~-~~aa~~~s~~~~~~~vG----R 289 (422)
T COG0738 219 PSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVA----IGSFLVSYLEELLGLNE-QQAAYYLSFFWVGFMVG----R 289 (422)
T ss_pred ccccccccchHHHHHhChHHHHHHHHHHHHHhHHHH----HHHHHHHHHHhcCCccH-HHHHHHHHHHHHHHHHH----H
Confidence 111111112567888888888777766666664443 44455666666 44333 24444444444444333 9
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccc
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRG 463 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 463 (539)
+++.++..|+...+.+....++..+.++...+. +....+......+.+.....|..++...+..| + ..
T Consensus 290 Fig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~----------~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~-~t 357 (422)
T COG0738 290 FIGSALMSRIKPEKYLAFYALIAILLLLAVALI----------GGVVALYALFLIGLFNSIMFPTIFSLALKNLG-E-HT 357 (422)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh----------cChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-c-cc
Confidence 999999999999888887776666655555552 12333333334444444557888888888888 3 34
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHH
Q 009250 464 KIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 508 (539)
Q Consensus 464 ~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 508 (539)
...|....+.-+|+++.|++.|++.|..|....+.....+|.+..
T Consensus 358 s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 358 SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred cccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 444445566779999999999999999998777765555555554
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=252.35 Aligned_cols=347 Identities=16% Similarity=0.059 Sum_probs=227.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH---HHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHH
Q 009250 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI---DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPI 200 (539)
Q Consensus 124 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~ 200 (539)
...++..+++.+++.++++++|+++||+|||+++.. +.++..+..+.+...+|+++++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457889999999999999999999999999997533 32333333333444589999999999999999999999999
Q ss_pred HHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHH
Q 009250 201 YISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDA 280 (539)
Q Consensus 201 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 280 (539)
++.|++++++|++++++.+++.++|.++||++++++....+ |++.|+..++..++.+++.+++++++.- .++...+
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 207 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKTGNA--APDLKID- 207 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec-
Confidence 99999999999999999999999999999999999988877 9999966666666666666666665310 0000000
Q ss_pred HHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCC
Q 009250 281 KAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT 359 (539)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 359 (539)
..... .....++.+.+++.++...+...+..+ ....+..+.|.++++. +.+
T Consensus 208 -------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 208 -------------RNIIR-----------STITLLKYAKADKRIWLAILGISWFWL----VGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred -------------cchHH-----------HHHHHHHHHhcCchHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHcCCc
Confidence 00000 001245566666666655544433332 2233444566666654 444
Q ss_pred hhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcC-CC-----------Cccchh
Q 009250 360 DGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSL-PL-----------DEDFSH 427 (539)
Q Consensus 360 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~ 427 (539)
. ...+.+.+...+++.++ .++.|++.++..+++.+..+.++.++..+.+.+.... .. ....+.
T Consensus 260 ~-~~~g~~~~~~~~g~~ig----~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 260 E-NVATLFLAVFSVGVAVG----SFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred h-HHHHHHHHHHHHHHHHH----HHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccccc
Confidence 3 35555555555555444 9999999988777666655555554444433321000 00 000122
Q ss_pred hHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHH
Q 009250 428 NLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET-FGVAPVYAGFGGVSLL 506 (539)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~ 506 (539)
+...+..++++.+.+ ...+...+++.+..|++.+|+++|+.+++.+++..+++.+.+.+.+. .++...+++.+.+.++
T Consensus 335 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 335 WRILIDLFGLAAAGG-LYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 222222222322222 22344668888999999999999999999999999999999988753 3455555544444344
Q ss_pred HH
Q 009250 507 SA 508 (539)
Q Consensus 507 ~~ 508 (539)
..
T Consensus 414 ~~ 415 (1140)
T PRK06814 414 VA 415 (1140)
T ss_pred HH
Confidence 33
No 86
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=4.4e-26 Score=224.86 Aligned_cols=374 Identities=19% Similarity=0.140 Sum_probs=268.7
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+..++++.++..+...+....++.+..+..- |+...+++.++..+...+.++++|.++||++||++++.+-++.++..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~--S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTG--SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 4455666777777777777778877776644 89999999999999999999999999999999999999998887665
Q ss_pred HHHHhh-----hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 169 IISAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 169 ~~~~~a-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
+..++. .+.+.+++.-++.|++.+...|+..+++.|..|+++...++++.+...++..++||.++|.+....| -
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~ 168 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-A 168 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-H
Confidence 555432 4788899999999999999999999999999999999999999999999999999999999888777 7
Q ss_pred HHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCc
Q 009250 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
.+.|++.++..++..+.....+++++ +.+. . .++..+..+..++-+.+++.
T Consensus 169 ~~~f~inalsfl~~i~~l~~~~~~~~----~~~~-~------------------------~e~~~~~l~~G~ryv~~~~~ 219 (524)
T PF05977_consen 169 AAAFLINALSFLISILALLRWKPPPP----PSSL-P------------------------RERFFSALREGLRYVRSSPP 219 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccc----cccc-c------------------------hhhhhhhHHHHHHHHhcchH
Confidence 88888887766655444433332210 0000 0 00001112234455555555
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
.+..++...++.+ ....+...+|.+.++.-..++...+++.+...+++++| .++.+++.+|+++++++..+.
T Consensus 220 l~~~l~~~~~~~l----~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~G----al~~~~l~~~~~~~~lv~~~~ 291 (524)
T PF05977_consen 220 LRSVLLRSFLFNL----FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILG----ALLLPRLRRRLSSRRLVLLAS 291 (524)
T ss_pred HHHHHHHHHHHHH----hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHH----HHHHHHhhcccCcchhhHHHH
Confidence 5544443333222 12223345677766543344446677766666666444 888899999999888888888
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
++.+++.+.+.+. ...++.+..++..|.+.. ......+...+..|++.||+++++++++...+..+|..
T Consensus 292 ~~~a~~~~~lal~----------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsl 361 (524)
T PF05977_consen 292 LLFALALLLLALS----------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSL 361 (524)
T ss_pred HHHHHHHHHHhcc----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 8777777766652 222222333333333222 23445577889999999999999999999999999999
Q ss_pred HHHHHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 483 FFLDLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 483 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
+.|.+.+..|....+.+.++..+++.++.+
T Consensus 362 l~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 362 LWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888777666555555443
No 87
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=9.4e-26 Score=250.78 Aligned_cols=360 Identities=15% Similarity=0.006 Sum_probs=233.1
Q ss_pred ccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH---hhhcHHHHH
Q 009250 105 VMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA---QAHSLDEML 181 (539)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~l~ 181 (539)
......+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++++.++..++.+++. ++++++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAF 107 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 33445566777777754556679999999999999999999999999999999998877666555443 457899999
Q ss_pred HHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC--------cchhHHHHHhhHHH
Q 009250 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD--------PHWWRTMLYIASLP 253 (539)
Q Consensus 182 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--------~~~wr~~f~~~~~~ 253 (539)
++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++... .++|++.+.+.++.
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988765 23255555444433
Q ss_pred H-HHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHH
Q 009250 254 G-FILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGA 332 (539)
Q Consensus 254 ~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (539)
. ++.+++.+++|+.|+....+.+.++ . .........++.+++++..+..++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDKKK----------Y---------------LFPKLLWRNLKLLRSDRVLWLAIIGLS 242 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccccc----------c---------------ccHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3 3334444556766532100000000 0 000000123445566665554444333
Q ss_pred HHHHhhhhhhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHH
Q 009250 333 LFLLQQFAGINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISML 411 (539)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 411 (539)
+..+ .......+.+.++ +..+.+.....+.+.....+..+++ .++.+++.||+++++.+.++.++.+++.+
T Consensus 243 ~~~~----~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g----~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 314 (1146)
T PRK08633 243 YFWF----ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIG----SLLAGRLSGRHIELGLVPLGALGLALSLF 314 (1146)
T ss_pred HHHH----HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH----HHHHHHHhCCceEccchhHHHHHHHHHHH
Confidence 3322 2222333444444 4445544314444444444444333 89999999999998888877777776666
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 412 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
++.... +.+..++..++++.+.+. ..+...+++.+..|++.||+++|+.+++.+++.++++.+.+.+.. .
T Consensus 315 ~~~~~~--------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~ 384 (1146)
T PRK08633 315 LLPTAP--------SLASVLVLFFLFGFSAGL-FIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-L 384 (1146)
T ss_pred HHHHhh--------hHHHHHHHHHHHHHHHHH-hhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 555421 112222222222222222 234456778899999999999999999999999888777665543 3
Q ss_pred C--cchhhHHHHHHHHHH
Q 009250 492 G--VAPVYAGFGGVSLLS 507 (539)
Q Consensus 492 g--~~~~~~~~~~~~~~~ 507 (539)
+ +...+++.+.+.++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 385 GLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 3 333444444443333
No 88
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.7e-25 Score=221.86 Aligned_cols=414 Identities=12% Similarity=0.061 Sum_probs=252.2
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHH-H--hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAK-E--LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPL 164 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~ 164 (539)
+..+.+..++..+......+.+|.+.+ + +|+ +..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 455556666777776666777776644 4 788 88899999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCc---cccchhhhHHHHHHHHHHHHHhcCCCCCCcc
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 241 (539)
+++.++.+++++++.++++|++.|+|.|...+...++++|++|+++ |+.++++++.+.++|.++|+++++++.+..+
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998764 8889999999999999999999999988777
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccc----cchHHHHhcCChhHHHHHHH-------------H-H-cCCcchHHHHHH---
Q 009250 242 WWRTMLYIASLPGFILALGMQFTV----ESPRWLCKGGMLNDAKAVIA-------------N-L-WGESEINKAIEE--- 299 (539)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~~~~-------------~-~-~~~~~~~~~~~~--- 299 (539)
||+.|++.++..++..+...+.. +.|+. .++.+.++...... . . ............
T Consensus 170 -~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (475)
T TIGR00924 170 -YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSV-PDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVT 247 (475)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcccccccCCCC-CCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999998865555444333322 11110 00000000000000 0 0 000000000000
Q ss_pred ----HHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CCC--h-hHHHHHHHHHH
Q 009250 300 ----FQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--D-GALASLLVGVT 371 (539)
Q Consensus 300 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~ 371 (539)
........++ ......+.+ ... ++...+.....+..+.......+.+.++. +.. . ......+..+.
T Consensus 248 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~-~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n 321 (475)
T TIGR00924 248 LAVIIFFFRLAFKP----RLDAVARNK-MYA-YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLN 321 (475)
T ss_pred HHHHHHHHHHHHhc----cCCHHHHhH-HHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhh
Confidence 0000000000 000011111 111 12222222222223333333344443332 211 0 00122222222
Q ss_pred HhcccccccchhhhHHHHhhhcCC-----chhh--HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc
Q 009250 372 NFAGLRSEKYCALCASYLMDKEGR-----QKLL--IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG 444 (539)
Q Consensus 372 ~~~~~i~~~~~~~~~g~l~dr~g~-----r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (539)
.+...+. .++..++..|.+| +... .+|+++.+++++.+.+...........+.++++...++.......
T Consensus 322 ~~~iil~----~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~ 397 (475)
T TIGR00924 322 PFWVVVG----SPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELM 397 (475)
T ss_pred HHHHHHH----HHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 2222111 4443333333333 3333 667777777776665432111111112333344444444444455
Q ss_pred cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeee
Q 009250 445 AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 445 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
..|...++..+..|++.||+.+|+......+|..+++.+.....+..++...|...++++++..++.++..|
T Consensus 398 ~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 398 ISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 568888999999999999999999999999999999999887777777777777777777766665544433
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=2.4e-26 Score=215.85 Aligned_cols=372 Identities=11% Similarity=0.059 Sum_probs=233.0
Q ss_pred HHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchh-hHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPIL-EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
+++|+-.|+.- .+...+...|.+.+|+|+ ++.+ .|.+.++++.+|++++++.|+++||+|.|+++.++.+.+++.+
T Consensus 30 ~~lC~fGF~~e-~R~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 30 LYLCFYGFMAQ-FRPGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHH-hhchHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 33444444433 456667788999999999 8888 8999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009250 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (539)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 248 (539)
++.++++++..+.+.|++.|+++|... +...++..|+|++||+++.+++.++..+|.+++++++++ ....+ ||+.+.
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~ 183 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHH
Confidence 999999999999999999999999999 999999999999999999999999999999999999998 44556 887654
Q ss_pred h---hHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHH-HHHH-HHHHHHhcCCCCcchhhhhhccCc
Q 009250 249 I---ASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINK-AIEE-FQLVIKKDGSDLDSQWSELLEEPH 323 (539)
Q Consensus 249 ~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 323 (539)
+ ......+++++.+++|..++-+.-+++.+...............+. ...+ .+......-......+++..+++.
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~ 263 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ 263 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc
Confidence 4 3344445556667777655433222211000000000000000000 0000 000000000000112223334433
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhH
Q 009250 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSY 403 (539)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~ 403 (539)
. +...+++....+++..+..|...+.+....+...+.+.+-++..+.+++. .+..|++-.++.+-..+.++.
T Consensus 264 v----l~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~----a~~ag~~~~~w~~~~~l~l~v 335 (511)
T TIGR00806 264 L----LLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAIT----SFIAGFVNIRWARWSKLLIAV 335 (511)
T ss_pred h----hhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHH----HHHHHhhcCCchhhHHHHHHH
Confidence 2 22334444555577777888888877765432226666666666666555 888888866553333333333
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
....-+.+++.... ..+.+...+..+++...+... .++....+++....+.-|..+|+++++.-+-..+-..
T Consensus 336 ~s~~~~gll~~m~~------t~~Iw~~Y~~yvlf~~~y~fl-itia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 336 VSAIQAGLVFWMSQ------SHDIWVLYVTYVLFRGIYQFL-VPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred HHHHHHHHhhhhhc------ccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 32222222222211 113333333334443333332 2334455556666676799999988877665554443
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.4e-26 Score=235.65 Aligned_cols=306 Identities=18% Similarity=0.140 Sum_probs=212.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
++.+++..+...+..+..++.++.++++|++ ++.+.|++.+.+.++++++.++.|+++||+|||+++.++.+++++++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 3445556677777788999999999999999 88888999999999999999999999999999999999999999999
Q ss_pred HHHHhhh---------------------------------------------------cHHHHHHHHHHhhhchhhhhhh
Q 009250 169 IISAQAH---------------------------------------------------SLDEMLWGRFLVGLGIGVNTVL 197 (539)
Q Consensus 169 ~~~~~a~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~ 197 (539)
+++++.+ .+..++++|+++|+|.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9998763 2456788999999999999999
Q ss_pred HHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc---------------------chhHHHHHhhHHHHHH
Q 009250 198 VPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFI 256 (539)
Q Consensus 198 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~ 256 (539)
+.+++.|++|+++|+++++++..+..+|.++|+++++++.+.. +.||..|++.+++.++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998776432 1278889988888887
Q ss_pred HHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHH
Q 009250 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLL 336 (539)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (539)
..+..+++|++.+....+.+.+..++. ... ..+.+ ...+ .....++.....+.+++++.++...+...+...
T Consensus 273 ~~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~-~~~~~-~~~~----~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~ 344 (633)
T TIGR00805 273 TSIPFFFFPKALPKEGKRVNVDVHETE--KLE-KSEDK-SRKK----NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSL 344 (633)
T ss_pred HHHHHHhCccccCCcccccchhhhhhh--ccc-ccccc-cchh----hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 776666666542100000000000000 000 00000 0000 000001112345667787766554444333333
Q ss_pred hhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhc-ccccccchhhhHHHHhhhcCC--chhhHhhHHHHHHHHHH
Q 009250 337 QQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFA-GLRSEKYCALCASYLMDKEGR--QKLLIGSYLGMAISMLL 412 (539)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~g~l~dr~g~--r~~~~~~~~~~~~~~~~ 412 (539)
.+..+..+.|.++++....+...++.+.++..++ .+++ .+++|+++||++. |+.+..+.++..++.++
T Consensus 345 ----~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG----~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 345 ----AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLG----YLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred ----HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHH----HhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 4555666788888764333444565555544432 2223 8999999999984 45666666666665444
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=1.3e-25 Score=222.63 Aligned_cols=409 Identities=13% Similarity=0.051 Sum_probs=242.6
Q ss_pred HHHHHHHHHhhhhhcccccchhH-HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLI 165 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~ 165 (539)
.++.+++..+...+....+.+.+ ..+.+++|+ +..+.+++.+.+.....+..+++|+++|| +||||+++++.++++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 35555555566666655444444 566788998 78888999999998888999999999999 999999999999999
Q ss_pred HHHHHHHhhhcHHH-HHHHHHHhhhchhhhhhhHHHHHHhcCCCC--ccccchhhhHHHHHHHHHHHHHhcCCCCCCcch
Q 009250 166 LGAIISAQAHSLDE-MLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (539)
Q Consensus 166 ~~~~~~~~a~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 242 (539)
+++++++++++... ++++|+++|+|.|...+...+++.|.+|++ +|++++++++++.++|..+||.+++++.++.+
T Consensus 93 ~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g- 171 (489)
T PRK10207 93 IGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG- 171 (489)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 99999999877555 557999999999999999999999999877 45889999999999999999999999999888
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccchHHHH--hcCChhHHHHHH-------------HHHcCCcchHHHH-HH---HH--
Q 009250 243 WRTMLYIASLPGFILALGMQFTVESPRWLC--KGGMLNDAKAVI-------------ANLWGESEINKAI-EE---FQ-- 301 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~---~~-- 301 (539)
||+.|++.++..++..+...+.++..+... .+++..+..... ............. .. ..
T Consensus 172 w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (489)
T PRK10207 172 YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTI 251 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999976543333333333322111000 001111110100 0000000000000 00 00
Q ss_pred HHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHH-cCCC------hhHHHHHHHHHHHhc
Q 009250 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT------DGALASLLVGVTNFA 374 (539)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~ 374 (539)
.-..++.+. .+.+|++.+....+ .+.....+..+.......+.+.++ .... .+.....+..+..++
T Consensus 252 ~f~~~~~~~-----~~~~r~r~~~~~~l--~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii 324 (489)
T PRK10207 252 IFFREAFKL-----DKTGRNKMFVAFVL--MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVV 324 (489)
T ss_pred HHHHHHhcC-----CHHHHHHHHHHHHH--HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHH
Confidence 000001111 02233322221111 111222222233333344444442 2221 111111222223323
Q ss_pred ccccccchhhhHHHHhhhcCCchh-------hHhhHHHHHHHHHHHHHHhc-CCCCccchhhHHHHHHHHHHHHHhcccc
Q 009250 375 GLRSEKYCALCASYLMDKEGRQKL-------LIGSYLGMAISMLLVVGATS-LPLDEDFSHNLSILGTLFYIFTFAIGAG 446 (539)
Q Consensus 375 ~~i~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (539)
. .++.+++.||+++|+. +.+|+++.+++++.+..... ....+...+.++++...++.........
T Consensus 325 ~-------~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~ 397 (489)
T PRK10207 325 A-------SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFIS 397 (489)
T ss_pred H-------HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 3 7788999999998873 66777777777654432111 1101111122223323222222223335
Q ss_pred cccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH----------HhCcchhhHHHHHHHHHHHHhhhe
Q 009250 447 PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE----------TFGVAPVYAGFGGVSLLSALFAYY 513 (539)
Q Consensus 447 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 513 (539)
+.....+.+..|++.+|.++|+.+...++|+.++..+...... ...+...|...++..++..++.+.
T Consensus 398 ~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 398 ALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6667778889999999999999999999999999888765421 112445566666666655555443
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.8e-24 Score=191.67 Aligned_cols=368 Identities=19% Similarity=0.198 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
+..+..+.+..+-.--..+..+|.++.+++|+|+ +...+|+++++..+...+.+++..+++.|+|.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 3334444444454555668889999999999999 88899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009250 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (539)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 245 (539)
++.++-... +.+.++.+-.+.|.|.+...+....++-+.||+| -+..+++|.+..++|..+++.+...+.++.++||.
T Consensus 89 ~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 89 AGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 999999887 8888999999999999999999999999999976 89999999999999999999999988888755999
Q ss_pred HHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchh
Q 009250 246 MLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (539)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (539)
...+-+.++++.++.++.-...++ ....+.+..+...+++++.-|
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~-----------------------------------~~~~~~~~~~~~~vw~~~~aW 211 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQ-----------------------------------AASIATKLVSVRKVWRSPLAW 211 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhccccc-----------------------------------ccccccccccccccccCchhH
Confidence 999999998888776654321110 011112223345577887766
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc-CCchhhHhhHH
Q 009250 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE-GRQKLLIGSYL 404 (539)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 404 (539)
...+...+ +...++....++|.++.+.|.+.. .++.+.++..+..... ++....+.+|. .+|+.......
T Consensus 212 ~vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~-~aG~llsl~~l~~~~~----~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 212 QVTLFMGL----QSLLYYIVIGWLPAILIDRGLSAA-EAGSLLSLMQLAQLPT----ALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred HHHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHH-HhhhHHHHHHHHHHHH----HHHHHHHHHHhcccchHHHHHHH
Confidence 65444333 344677788899999999999876 7777777777776555 88888998875 45666666667
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccc-cccCcccccchhhHHHHHHHHHHHHHHHH
Q 009250 405 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIP-ELSSNRTRGKIMGFSFSVHWVCNFLVGLF 483 (539)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 483 (539)
++.++.+.+.+.+. . ..+...++++.+.+ +..+.....+. +...++..+.-.|+.+.++++-.++||.+
T Consensus 283 ~~l~G~~G~~~~P~-------~--~~~lw~~llG~G~G-~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l 352 (395)
T COG2807 283 LMLVGLVGLLLAPG-------Q--LPILWALLLGLGQG-GAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWL 352 (395)
T ss_pred HHHHHHHHHHHhhh-------h--HHHHHHHHHhCccc-hHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhh
Confidence 77777776665331 1 12222233322222 23344444443 34456678888999999999999999999
Q ss_pred HHHHHHHhC-cchhhHHHHHHHHHHHHhh
Q 009250 484 FLDLVETFG-VAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 484 ~~~l~~~~g-~~~~~~~~~~~~~~~~~~~ 511 (539)
+|.+.|..| |...+.....+.++..+.-
T Consensus 353 ~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 353 FGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999987 5555555554444444433
No 93
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=2.1e-25 Score=221.76 Aligned_cols=336 Identities=17% Similarity=0.149 Sum_probs=220.5
Q ss_pred hHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh----hcch-HHHHHHHHHHHHHHHHHHhhhc------H
Q 009250 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCR-RTFQIDTIPLILGAIISAQAHS------L 177 (539)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~ 177 (539)
..+.+.+++|+ ++.++|++.++..+..++..++.|+++|| +||| +.++.+....+++.+++.+.++ .
T Consensus 22 l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 44667788999 89999999999999999999999999997 6874 4677788888888888877664 4
Q ss_pred HHHHHHHHHhhhchhhhhhhHHHHHHhcC-CCCccccchhhhHHHHHHHHHHHHHhcCCCC-------CCcchhHHHHHh
Q 009250 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-------DDPHWWRTMLYI 249 (539)
Q Consensus 178 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-------~~~~~wr~~f~~ 249 (539)
..+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+ ||+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i 178 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHH
Confidence 56677888999988888888888888887 4688999999988888888766655443322 2345 9999999
Q ss_pred hHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHH
Q 009250 250 ASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (539)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (539)
.++++++..+.. ++.+|+++. ..+ .++++.+.++.++.+++++.++...
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~-----~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSE-----IPK-------------------------NIEKKLSLKQIFKALFKNDQLLILC 228 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCC-----CCc-------------------------ccccCCCHHHHHHHHhCCHHHHHHH
Confidence 998887776554 445654310 000 0000111123455666776665544
Q ss_pred HHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
....+... .......+.+++.+..... ....+....+..+...++ .++.+++.||+|+|+.+..+..+..+
T Consensus 229 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ii~----~~~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 229 LAYLFYNL----AFNIKNGVQVYYFTYVLGD-PELFSYMGSIAIVAGLIG----VLLFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHH----HHHHHcchhheeEeeecCC-hHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 43333332 2222222334443332222 223333333333333333 89999999999999998888877777
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------cccccchhhHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
+.+.+.+.. .+.+.......+...+.+. ..+..+++.+|..+ ++.+|.+.|+.+.+..+|..+++
T Consensus 300 ~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 300 GYLIFFFAG-------SNLPLILVLIILAGFGQNF-VTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHHHHHHcc-------hhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 666554411 0112222222222222221 23455566666654 55689999999999999999999
Q ss_pred HHHHHHHHHhCcc
Q 009250 482 LFFLDLVETFGVA 494 (539)
Q Consensus 482 ~~~~~l~~~~g~~ 494 (539)
.+.|.+.+..||.
T Consensus 372 ~i~g~ll~~~G~~ 384 (437)
T TIGR00792 372 FLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999988764
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=6.4e-26 Score=202.41 Aligned_cols=334 Identities=16% Similarity=0.073 Sum_probs=204.0
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHH
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~ 201 (539)
+....|.+.+.|++...+.++.+|.++||+|||+++++|++..++..++.+++.|+..++++|++.|+..| ...+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHH
Confidence 45567999999999999999999999999999999999999999999999999999777777999999988 67788899
Q ss_pred HHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC---CcchhHHHH--HhhHHHHHH-HHHHhcccccchHHHHhcC
Q 009250 202 ISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---DPHWWRTML--YIASLPGFI-LALGMQFTVESPRWLCKGG 275 (539)
Q Consensus 202 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---~~~~wr~~f--~~~~~~~~~-~~~~~~~~~~~p~~~~~~~ 275 (539)
++|.+++|+|+++++.+...+++|.++||.+|+++.. ..+.+...+ ++..++... .....+++||+-+ .++
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~---~rk 221 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP---LRK 221 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc---chh
Confidence 9999999999999999999999999999999999987 233121221 222222222 3345566788732 111
Q ss_pred ChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH---HHHHHHHhhhhhhHHHHHhHHHH
Q 009250 276 MLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI---GGALFLLQQFAGINGVLYFSSLT 352 (539)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 352 (539)
+.++... ..+..++. ++..+..........+++.....+. ...+..+.....+....++...+
T Consensus 222 ~~~~~~~----------~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l 287 (451)
T KOG2615|consen 222 RNDEHST----------LQEAADDR----LALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFL 287 (451)
T ss_pred hcccccc----------hhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHh
Confidence 1111100 00000000 0000000011112233333222111 11122222222333334444444
Q ss_pred H-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCch-----hhHhhHHHHHHHHHHHHHHhcCCCCccch
Q 009250 353 F-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQK-----LLIGSYLGMAISMLLVVGATSLPLDEDFS 426 (539)
Q Consensus 353 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (539)
. +..++++. +.+-++...++.+ .++.+.+..+..|.+ .+.....++.-.++++... .
T Consensus 288 ~~~rfg~ss~-~~G~vl~~tGl~m-------~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~---------~ 350 (451)
T KOG2615|consen 288 THGRFGYSSM-QQGKVLSTTGLLM-------LVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA---------R 350 (451)
T ss_pred hcCccCCChh-hheeeeehhhHHH-------HHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc---------c
Confidence 2 33444443 5555566666655 555555555544433 3333333333333333321 1
Q ss_pred hhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009250 427 HNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~ 490 (539)
....+.....+-...+....+....++....|+++||++.|+..+...++.++||.+.|.+..+
T Consensus 351 ~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 351 TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 1122222222222222223455567788999999999999999999999999999999877654
No 95
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=2.4e-25 Score=214.79 Aligned_cols=332 Identities=14% Similarity=0.088 Sum_probs=218.0
Q ss_pred ccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-----cchHH-HHHHHHHHHHHHHHHHhh--
Q 009250 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRT-FQIDTIPLILGAIISAQA-- 174 (539)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a-- 174 (539)
.....+.+|.+.+|+|+ |..++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34567788999999999 88899998755 455554 99999999998 89887 567788888887788887
Q ss_pred -hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcch-------hHHH
Q 009250 175 -HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW-------WRTM 246 (539)
Q Consensus 175 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-------wr~~ 246 (539)
.+++.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+....+. ||..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 46666777888899999999999999999999999999999999999999999999999877665442 9999
Q ss_pred HHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchh
Q 009250 247 LYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (539)
Q Consensus 247 f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (539)
|++.++..++..+..++ .+|+++. +. ++ +++.. +.+..++++++++..+
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~---~~--~~--------------~~~~~-----------~~~~~~~~~~~~~~~~ 209 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQED---AS--VP--------------KPLTQ-----------AVLKPIREFFQRKNMI 209 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcc---cc--cc--------------hhHHH-----------HHHHHHHHHHHhcCch
Confidence 99999887776655554 4453210 00 00 00000 0112345555655433
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHH-hcccccccchhhhHHHHhhhcCCchhhHhhHH
Q 009250 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTN-FAGLRSEKYCALCASYLMDKEGRQKLLIGSYL 404 (539)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~ 404 (539)
..........+... .+.....+.+.+.++.+.+.. ..+.+..+.. +.+.++ .++++++.||+|+|+.+..+.+
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~-~~g~~~~~~~~~~~~~g----~~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 210 QALLLLLLIVLYKL-GDSAATVLTTLFLLDMGFSKE-EIALVAKINGLLGAILG----GLIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHH-HHHHHhHHHHHHHHHHH----HHHHHHHHhhhhHHHHHHHHHH
Confidence 33222222222222 333444566666666666654 4443333222 222222 8999999999999998888887
Q ss_pred HHHHHHHHHHHHhcCCCCc-cchhhHHHHHHHHHHHHHhc-ccccccccccccccCcccccchhhHHHHHHH
Q 009250 405 GMAISMLLVVGATSLPLDE-DFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSVHW 474 (539)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 474 (539)
+.+++..++.+........ ........+....+..+++. ...+...++..|.+|+++||+..|+.+...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 7776655544421100000 00011122222222223322 2345667889999999999999999887654
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.93 E-value=7.1e-24 Score=207.01 Aligned_cols=373 Identities=11% Similarity=0.000 Sum_probs=243.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHH--HHHHHHHHHHHHhhh-hhhhhhhcchHHHHHHHHHH-
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLV--VSIFIAGAFVGSISS-GSLADKLGCRRTFQIDTIPL- 164 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~-g~l~dr~Grr~~l~~~~~~~- 164 (539)
+..+...++..++..+...|.+|.+.+|.|. +..++|++ .+...+...+.++++ ++..||+||||.+++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 4556667788888889999999999999998 88999997 466677777888888 45799999999876665432
Q ss_pred HHHHHHHH-h--hhc-HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc
Q 009250 165 ILGAIISA-Q--AHS-LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (539)
Q Consensus 165 ~~~~~~~~-~--a~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 240 (539)
++.....+ + ..+ ...++..-++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 2 222 3344555666777778888888889999999998898888888888999999998888888888
Q ss_pred chhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhc
Q 009250 241 HWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLE 320 (539)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (539)
+ ||..|++.+++.++..+..++++|+++ ++.+ .++....+.++.++
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~~~~---~~~~------------------------------~~~~~~~~~~~~l~ 206 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKDRAV---ASPE------------------------------APLARRASLFRFFR 206 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCCCCc---Cccc------------------------------cchhhHHHHHHHHc
Confidence 8 999999999888776666555544321 0000 00001123556777
Q ss_pred cCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHh-cccccccchhhhHHHHhhhcCCchhh
Q 009250 321 EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNF-AGLRSEKYCALCASYLMDKEGRQKLL 399 (539)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~g~l~dr~g~r~~~ 399 (539)
++..+.......+.... ......+.+.++++.+.+.. ..+........ ... ++.++.|++.||+|+|+.+
T Consensus 207 ~~~~~~~~~~~~l~~~~----~~~~~~~~~~~l~~~G~s~~-~ig~~~~~~~~~~~~----~g~~~~g~l~~r~g~~~~l 277 (390)
T TIGR02718 207 RPLAWSLLALALLSAMT----AVSGFGLSKLYLVDAGWPLE-WIGRLGMAGGAVTVL----LGCGGGAWLVRRAGLWRTF 277 (390)
T ss_pred CcCHHHHHHHHHHHHHH----HHHHHHHhhHHHHhcCCCHH-HHHHHHhHHHHHHHH----HHHHHHHHHHHHhhHHHHH
Confidence 77665555444333332 22233355666677777665 44444443322 222 2278999999999999988
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCc-ccccchhhHHHHHHHHHH
Q 009250 400 IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSN-RTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~ 477 (539)
..+.++.++..+.......... .... ..........++..+. .+.......+..++ +.+++.+++.+.+.++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 278 ILGVGLAGSLALLWFAQAAFWL---APGI-AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHccc---CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 8776655333322222111000 0111 1111111111111111 22333444455554 789999999999999999
Q ss_pred HHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHh
Q 009250 478 FLVGLFFLDLVETFGVAPVYAGFGGVSLLSALF 510 (539)
Q Consensus 478 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 510 (539)
.++|.+.|.+.|..|+...|.+.+++.+++.++
T Consensus 354 ~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 354 LIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888877766665543
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=1.2e-23 Score=207.86 Aligned_cols=408 Identities=13% Similarity=0.089 Sum_probs=246.9
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
.++|..+....+...+.+.. ..++...+.+.+++|+ +..+.+++.++. ..+..++++.|++.||+|||+++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgl--s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNL--TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc--CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 45666555555444444333 3445677899999999 888899988774 4556788889999999999999999999
Q ss_pred HHHHHHHHHHhh------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHH-HHHhcCC
Q 009250 163 PLILGAIISAQA------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT-SLFLGIP 235 (539)
Q Consensus 163 ~~~~~~~~~~~a------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~~~ 235 (539)
++++++++++++ ++++.+++.|+++|+|.+...+.....+.+|+| ++||++.|+...+.++|..+ +++..++
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997 689999999999999999999999999999997 67999999999999999975 4555444
Q ss_pred CCCCcchhHHHHHhhHHHHHHHHHHhcc-c--ccchHHHHhcCChhHHHHHHHHHcCC----------------------
Q 009250 236 AEDDPHWWRTMLYIASLPGFILALGMQF-T--VESPRWLCKGGMLNDAKAVIANLWGE---------------------- 290 (539)
Q Consensus 236 l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~--~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------- 290 (539)
+. .+ |+..|++.+++.++..++.+. + |+.|++..++++.++.++..++.++.
T Consensus 179 ~~--~~-~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l 255 (591)
T PTZ00207 179 FS--DN-TSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIIL 255 (591)
T ss_pred HH--Hh-HHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHH
Confidence 43 34 888888888887776655443 3 33444433333223322221110000
Q ss_pred ----------------cch-----------------------------------HHHHHHH-HHH---HHhc--------
Q 009250 291 ----------------SEI-----------------------------------NKAIEEF-QLV---IKKD-------- 307 (539)
Q Consensus 291 ----------------~~~-----------------------------------~~~~~~~-~~~---~~~~-------- 307 (539)
... +.+..+. +.. .+.+
T Consensus 256 ~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (591)
T PTZ00207 256 IVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDV 335 (591)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccc
Confidence 000 0000000 000 0000
Q ss_pred C---CCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc-CC-Chh--HH-HHHHHHHHHhcccccc
Q 009250 308 G---SDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GI-TDG--AL-ASLLVGVTNFAGLRSE 379 (539)
Q Consensus 308 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~-~~~~~~~~~~~~~i~~ 379 (539)
+ .+...++.+.+++..+|..++..++... ........+.++.+.. |. .+. .. ...+.++.+..|
T Consensus 336 ~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g----~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~G---- 407 (591)
T PTZ00207 336 DYIAPQFQETFIEGLKTARLWCLLWSIFCCVG----AHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVG---- 407 (591)
T ss_pred cCCCCCCcchHHHHHhchhHHHHHHHHHHhhC----chheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhh----
Confidence 0 0001134444444555544443333322 3334445566677777 54 222 11 334556666655
Q ss_pred cchhhhHHHHhhhcCCc--------hhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccc
Q 009250 380 KYCALCASYLMDKEGRQ--------KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGL 451 (539)
Q Consensus 380 ~~~~~~~g~l~dr~g~r--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (539)
++..|.+.....+| ...+....++.++.+++.+.. +.....+..++.+++.+.. .++...
T Consensus 408 ---Rl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~--------p~~~L~~~~~lvg~~~G~~-~~~~~~ 475 (591)
T PTZ00207 408 ---RLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL--------PKAALPLPYFIAAFANGFM-AATIAL 475 (591)
T ss_pred ---HHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC--------CccHhHHHHHHHHHHhhHh-HHHHHH
Confidence 88888776222221 122222222444444443311 1122233333333333322 355667
Q ss_pred ccccccCcccccchhhHHHHHHHHHHHHH-HHHHHHHHHHh----------C---cchhhHHHHHHHHHHHHhhheeeeC
Q 009250 452 VIPELSSNRTRGKIMGFSFSVHWVCNFLV-GLFFLDLVETF----------G---VAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 452 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~-~~~~~~l~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
.+.|++. ++-|+-.-+.....-+|..+. -.++|.++|.- | +..+|.+.+++++++.++...+.-+
T Consensus 476 i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R 554 (591)
T PTZ00207 476 VTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQ 554 (591)
T ss_pred HHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeee
Confidence 7889999 767777777766666776665 56777787652 2 6778999999999998876655544
Q ss_pred CC
Q 009250 518 TK 519 (539)
Q Consensus 518 ~~ 519 (539)
+|
T Consensus 555 ~r 556 (591)
T PTZ00207 555 YR 556 (591)
T ss_pred hH
Confidence 43
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=5.6e-24 Score=212.29 Aligned_cols=409 Identities=14% Similarity=0.069 Sum_probs=229.7
Q ss_pred HHHHHHHHhhhhhcccccchhH-HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLIL 166 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~ 166 (539)
++.+++..+...+....+...+ ..+.+++|+ +..+.+++.+.+........+++|+++|| +|||+++..+.++.++
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 3444455555555554444444 455688999 77777888888777766777899999999 5999999999999999
Q ss_pred HHHHHHhhh-cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCc--cccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 167 GAIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY--RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 167 ~~~~~~~a~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
+.+++++++ +.+.++++|+++|+|.|...+...+++.|++|+++ |..++++++++.++|..+||.+++++.+..+ |
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~ 179 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-W 179 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-H
Confidence 999999874 56677788999999999999999999999998653 4568899999999999999999999998888 9
Q ss_pred HHHHHhhHHHHHHHHHHhcc----cccchHHHHhcCChhHHHHHH-----------HH-HcCCcchHHHHHHH------H
Q 009250 244 RTMLYIASLPGFILALGMQF----TVESPRWLCKGGMLNDAKAVI-----------AN-LWGESEINKAIEEF------Q 301 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~------~ 301 (539)
|+.|++.++..++..+...+ ++|.++. ..+++.+...... .. .....+........ .
T Consensus 180 ~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (500)
T PRK09584 180 SVAFALSVVGMLITVVNFAFCQRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVV 258 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999987655544333222 2221100 0000011100000 00 00000000000000 0
Q ss_pred HHHHhcCCCCcchhhhhhccCchhHHHHH--HHHHHHhhhhhhHHHHHhHHHHHHH-c-----CCC-hhHHHHHHHHHHH
Q 009250 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIG--GALFLLQQFAGINGVLYFSSLTFQD-V-----GIT-DGALASLLVGVTN 372 (539)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~~~ 372 (539)
.......+. .+. ..++.+.. .++.....+..+.........+..+ . +.. .......+..+..
T Consensus 259 ~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~i 329 (500)
T PRK09584 259 IFGKEAFAM-----KGA----ARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWI 329 (500)
T ss_pred HHHHHHhhc-----CHH----HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHH
Confidence 000000000 000 01111111 1111111111111111122211111 1 111 1112222222222
Q ss_pred hcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccc
Q 009250 373 FAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLV 452 (539)
Q Consensus 373 ~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (539)
+.. .++.....+++.+|.+..+.+.+++++.+++++.+.............+.++.+...++.........|....+
T Consensus 330 il~---~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~ 406 (500)
T PRK09584 330 MIG---SPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAM 406 (500)
T ss_pred HHH---HHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 222 11113333555555555577888888888888887664432211111122334444444444445557778888
Q ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH----------HhCcchhhHHHHHHHHHHHHhhhe
Q 009250 453 IPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE----------TFGVAPVYAGFGGVSLLSALFAYY 513 (539)
Q Consensus 453 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 513 (539)
+.+..|++.||+.+|+......+|..++..+.+.... ..++...|...++++++.+++.+.
T Consensus 407 ~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 407 VAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877776776666666542211 123556676666665555444433
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=4e-21 Score=186.40 Aligned_cols=398 Identities=14% Similarity=0.088 Sum_probs=248.8
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh----hhcchHHHHHH-HHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTFQID-TIP 163 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~ 163 (539)
++.++...+-..+......+.++.+.+++|. +....+++..+..+...+.+++.|.++| |+|||+.++.+ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 4444445555566677777788888899999 8899999999999999999999999999 59999998874 666
Q ss_pred HHHHHHHHHhhhcHH-----------------HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCcc--ccchhhhHHHHHH
Q 009250 164 LILGAIISAQAHSLD-----------------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR--GSLGTLCQVGTCL 224 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~ 224 (539)
..++.++.++++++. .++++-.+..++.....+...++++|.+|+++| +.+.++.+...++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 677777777877653 223333444557888888899999999998865 5799999999999
Q ss_pred HHHHHHHhcCCCC--CCc------------chhHHHHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcC
Q 009250 225 GIITSLFLGIPAE--DDP------------HWWRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWG 289 (539)
Q Consensus 225 G~~~~~~~~~~l~--~~~------------~~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 289 (539)
|.++|+.++++.. +.. .+.|..|++.++..++..+.. ++.+|.|... .++.++
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~---------- 231 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN---------- 231 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh----------
Confidence 9999999987641 110 137999999888777766554 4577765210 000000
Q ss_pred CcchHHHHHHHHHHHHhc-CCCCcchhhhhhccCc-hhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCC-C------
Q 009250 290 ESEINKAIEEFQLVIKKD-GSDLDSQWSELLEEPH-SRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGI-T------ 359 (539)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~------ 359 (539)
++.++..+.+ ....+.-++.+.+-|+ .+...+ ..++..+ +...+..|.+.+.. +... +
T Consensus 232 --------~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~---vqffsW~-a~f~~~~y~T~~vg~~v~~~~~~~~~~ 299 (477)
T TIGR01301 232 --------SEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLL---VTCLNWI-AWFPFILFDTDWMGREVYGGSVNQGAK 299 (477)
T ss_pred --------hhcccccccchhhhHHHHHHHHHHCCHHHHHHHH---HHHHHHH-HHHHHHHhccHHHHHHHcCCCCcchhH
Confidence 0000000000 0000112222322232 222222 2222222 33334444444433 2211 1
Q ss_pred --h----hHHHHHHHHHHHhcccccccchhhhHHHHhhhcCC-chhhHhhHHHHHHHHHHHHHHhcCCCC----------
Q 009250 360 --D----GALASLLVGVTNFAGLRSEKYCALCASYLMDKEGR-QKLLIGSYLGMAISMLLVVGATSLPLD---------- 422 (539)
Q Consensus 360 --~----~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 422 (539)
+ ......+.++...+. +++..++.+|+|+ |+...++.++.++++....+.......
T Consensus 300 y~~gvr~G~~~l~~~s~~~~i~-------s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~ 372 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLGIT-------SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGES 372 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 0 112223333333333 7788899999985 667688877777777777654321100
Q ss_pred --ccch-hhHHHHHHHHHHHHHhcccccccccccccccCc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC--cch
Q 009250 423 --EDFS-HNLSILGTLFYIFTFAIGAGPVTGLVIPELSSN--RTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG--VAP 495 (539)
Q Consensus 423 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g--~~~ 495 (539)
+... .+..++.....+..++. ...+.++++++..++ +..|..+|+.|.+..+...+.....|.+.+..| ...
T Consensus 373 ~~~~~~~~~~~l~~~~~~Gi~~A~-~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~ 451 (477)
T TIGR01301 373 LPPPTGIKASALIVFAILGIPLAI-TYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLP 451 (477)
T ss_pred cCcchhhHHHHHHHHHHhhHHHHH-HHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCee
Confidence 0000 12222222223223222 245677888888884 456999999999999999999998898777666 556
Q ss_pred hhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 496 VYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
.+.+.++..++++++.++.+|+.+.
T Consensus 452 ~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 452 AFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 6777778888888888888887654
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=8.9e-21 Score=182.02 Aligned_cols=372 Identities=16% Similarity=0.150 Sum_probs=247.2
Q ss_pred HHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhc-chHHHHHHHHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-CRRTFQIDTIPLILGAIISA 172 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~ 172 (539)
..+++..+..+...|..+.+-++.|. |..|+|.+.++..+...++++++|.++||++ +|+++.+..++.++..+...
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33455555667777888999999998 9999999999999999999999999999986 57888888888888887888
Q ss_pred hhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHh-----cCCCCCCcchhHHHH
Q 009250 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL-----GIPAEDDPHWWRTML 247 (539)
Q Consensus 173 ~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~-----~~~l~~~~~~wr~~f 247 (539)
..++++.+++.-++..+......|...++..+...+ ++.-.|-.-...++|.+++... .+.. +..+ ..+.+
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~-~~~~-~~~~~ 162 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYL-GISG-TSLIF 162 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhh-cccc-ccHHH
Confidence 889999999888888888888889999888888763 4445555666666666666332 2221 1111 33456
Q ss_pred HhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHH
Q 009250 248 YIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (539)
++.+..+++.....+.+|+.|+. +. .++..++....+..+++++|+....
T Consensus 163 ~i~~~~~~ll~~~~l~lp~~~~~---~~---------------------------~~~~~~~~~~~~~~~llk~~~~~~F 212 (400)
T PF03825_consen 163 YIAAILSLLLAGFALFLPKTPPK---RS---------------------------AKESVKKLLGLDALKLLKNPRFLVF 212 (400)
T ss_pred HHHHHHHHHHHHHHHhCCCCccc---cc---------------------------cCCCcccccchHHHHHhcCccHHHH
Confidence 66666666655556667776510 00 0000011111233467888876665
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
++...+... .......+.+.++++.+.......+...++..+ ++++.-...+++.+|+|.++++.++.+..+
T Consensus 213 ll~~~l~~~----~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~----aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~ 284 (400)
T PF03825_consen 213 LLAAFLIGI----SHAAYYTFFSIYLQELGGYSGSTIGILWALGVV----AEIPFFFFSGRFLKRFGIKWLLLLALVAYA 284 (400)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHH----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 554444333 344566677888888884322233333333322 234447889999999999999999999988
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHH----HHHHHHhcccccccccccccccCcccccchhhHHHHHH-HHHHHHHHH
Q 009250 408 ISMLLVVGATSLPLDEDFSHNLSILGTL----FYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVH-WVCNFLVGL 482 (539)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~ 482 (539)
+=..++..... +.+....... +.+..++.. ......++.+..|++.|+++.++++... .+|..+|..
T Consensus 285 vR~~l~a~~~~-------~~~~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ 356 (400)
T PF03825_consen 285 VRWLLYAYFSD-------PWPFIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL 356 (400)
T ss_pred HHHHHHHHhcC-------CcHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH
Confidence 88877776311 1122222222 123333322 2344578889999999999999988875 589999999
Q ss_pred HHHHHHHHhCcchh------hHHHHHHHHHHHHhhheeeeC
Q 009250 483 FFLDLVETFGVAPV------YAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 483 ~~~~l~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~ 517 (539)
+.|+++|+.|.+.. +.+.+++.++..++.+++.|+
T Consensus 357 igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 357 IGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999885543 344444444444444444444
No 101
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.9e-23 Score=177.44 Aligned_cols=390 Identities=15% Similarity=0.048 Sum_probs=243.4
Q ss_pred CCCCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHH
Q 009250 80 LGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQ 158 (539)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~ 158 (539)
.+..+|...+..+|+..|-.+++....+....+...|.++ +.++..++.++|.....+.++++|++.|| +|-|..-+
T Consensus 37 S~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gti 114 (459)
T KOG4686|consen 37 SALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTI 114 (459)
T ss_pred hhhhhHHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHH
Confidence 3445678888899999999999999888888888888888 77788999999999999999999999996 78887777
Q ss_pred HHHHHHHHHHHHHH---hhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC
Q 009250 159 IDTIPLILGAIISA---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 159 ~~~~~~~~~~~~~~---~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 235 (539)
+-+....+|.+.++ ..+.+|.+.++||+.|+|.-..-++-+.+..-|+..||.+.++|+......+|..+-..+.++
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ 194 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPF 194 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHH
Confidence 77777777777766 468999999999999999988888999999999999999999999999999998877666666
Q ss_pred CCCCcchhHHHHHhhHHHHHHHHHHh---cccccchHHHHhcCCh-hHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCC
Q 009250 236 AEDDPHWWRTMLYIASLPGFILALGM---QFTVESPRWLCKGGML-NDAKAVIANLWGESEINKAIEEFQLVIKKDGSDL 311 (539)
Q Consensus 236 l~~~~~~wr~~f~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (539)
+.+..+. ++-...-+.+.+.+. ..+..+-.-....+-. +.+++. ...++....+.+
T Consensus 195 ly~~~~~----~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAeri----------------lh~e~g~~Ge~p 254 (459)
T KOG4686|consen 195 LYDTMGR----MFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERI----------------LHLEEGFLGEEP 254 (459)
T ss_pred HHHHHHH----hcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH----------------HhhhcCcccCCc
Confidence 6543320 000000000000000 0000000000000000 001110 011111111111
Q ss_pred cchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhh
Q 009250 312 DSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMD 391 (539)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d 391 (539)
+-.-..-+ .+.+|...+.+.++... ..-+....|.++++...-++..++.+.+....+.++. +++.|.++|
T Consensus 255 kLtdv~~f-~ppfw~~~iicv~yyva----~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~----spvfg~i~D 325 (459)
T KOG4686|consen 255 KLTDVNTF-YPPFWVLVIICVLYYVA----WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVL----SPVFGAISD 325 (459)
T ss_pred cccccccc-CccHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhh----hhhHHHhHh
Confidence 11111112 23344444444443332 2223334455665544334435566666666666555 899999999
Q ss_pred hcCCchhhHhhHHHHHH-HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHH
Q 009250 392 KEGRQKLLIGSYLGMAI-SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSF 470 (539)
Q Consensus 392 r~g~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 470 (539)
|+|++...+.+..+..+ +-..+.+ +.+.+.....+.+..+..-. ...+..++.+.|++..|++.|..+
T Consensus 326 k~G~n~~wv~~a~~~tl~~H~~l~F----------t~lsPy~~m~~lGLsysllA-cslWP~va~~vpE~qLGTaygf~q 394 (459)
T KOG4686|consen 326 KYGFNLWWVASACILTLLGHSGLFF----------TFLSPYTSMTFLGLSYSLLA-CSLWPCVASLVPEEQLGTAYGFIQ 394 (459)
T ss_pred hhcceehhHHHHHHHHHHHhhhHHh----------hhccHHHHHHHHhhhHHHHH-HHHhhhhhhhCCHHHhcchHHHHH
Confidence 99998776655444433 3333333 12222333333333332211 224566778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-cc---hhhHHHHHHHHHHHHhh
Q 009250 471 SVHWVCNFLVGLFFLDLVETFG-VA---PVYAGFGGVSLLSALFA 511 (539)
Q Consensus 471 ~~~~~g~~~~~~~~~~l~~~~g-~~---~~~~~~~~~~~~~~~~~ 511 (539)
.+.++|-++.|.+.|.+.|..| +. ..|...+.+++....+.
T Consensus 395 sIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil 439 (459)
T KOG4686|consen 395 SIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL 439 (459)
T ss_pred HHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776 22 22344444444444443
No 102
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=2e-20 Score=171.91 Aligned_cols=401 Identities=15% Similarity=0.098 Sum_probs=268.4
Q ss_pred CCCCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH
Q 009250 80 LGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 159 (539)
+-+.+||.++++.++..+.+++.+-.+++........++ +...+-|+..+|++.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 456788999999999999999999889888888888888 55556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh------hcHH--HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHH
Q 009250 160 DTIPLILGAIISAQA------HSLD--EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a------~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 231 (539)
+..+..+|+.+-..+ +.++ ....+..+.+.++-........+..-||+++||..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999988766 2344 66678899998888777777888999999999999999999999999999999
Q ss_pred hcCCCCCCc----c-hhHH--HHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009250 232 LGIPAEDDP----H-WWRT--MLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (539)
Q Consensus 232 ~~~~l~~~~----~-~wr~--~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (539)
+...+..+. + .|-. .|+....+..+.+++. +..++.|+.- . ....
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP------------------p---------s~s~ 247 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP------------------P---------SASQ 247 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC------------------C---------chhH
Confidence 998887654 1 2655 3444444433333322 2233322100 0 0000
Q ss_pred HHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchh
Q 009250 304 IKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCA 383 (539)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (539)
....+.+-..+.++.++++.+-...+.+..... .++.....+...+...++.. ..++.+.....+.|+++ +
T Consensus 248 ~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g----~F~~l~~~l~~~l~~sgY~~-~~aG~ig~l~iv~Gmlg----a 318 (480)
T KOG2563|consen 248 AALQDASFPKSIKSCFKNRQFIILAICYGIGLG----LFNSLSTLLNLALCPSGYEG-VFAGYIGALMIVAGMLG----A 318 (480)
T ss_pred hhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHH----HHHHHHHHhhhccccccCCc-cccchhHHHHHHHHHHH----H
Confidence 001112234566777777765554444333332 44445555544444445443 23444444444444333 9
Q ss_pred hhHHHHhhhcCCch-hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 384 LCASYLMDKEGRQK-LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 384 ~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.+.|.+.||.++-+ .+++......++...+...... ..+.+.+.......+.++.+..|+..-+..|..-|..-
T Consensus 319 ~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~-----~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E 393 (480)
T KOG2563|consen 319 LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLF-----LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE 393 (480)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-----CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC
Confidence 99999999987654 3444444433332222221111 12333444444455556667788888888888777778
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhC----cchhhHHHHHHHHHHHHhhheeeeCCCCCCHH
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFG----VAPVYAGFGGVSLLSALFAYYFIVETKGRSLE 524 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (539)
++..|+.+..+++-+++-..+.+...+..+ +...-+.....+++..++..++.++.|+++.+
T Consensus 394 ~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 394 GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 999999999999999999999998888776 44334444455555555554554444444433
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=5.6e-20 Score=179.20 Aligned_cols=169 Identities=14% Similarity=0.149 Sum_probs=131.9
Q ss_pred HHHHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-cchHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLIL 166 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~ 166 (539)
+..+++..+...+....+...+|. +.+++|+ ++.+.+.+.+.+.....++.+++|+++||+ |||++++++.++.++
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 444444444555555445555554 4567888 888889999999999999999999999999 999999999999999
Q ss_pred HHHHHHhhh-cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC--ccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 167 GAIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 167 ~~~~~~~a~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
+.+++++.+ +...+.++..+.++|.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+..+ |
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w 167 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-W 167 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-h
Confidence 988777643 2233444445555667777787888999999875 69999999999999999999999999988888 9
Q ss_pred HHHHHhhHHHHHHHHHH
Q 009250 244 RTMLYIASLPGFILALG 260 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~ 260 (539)
|+.|.+.++..++..+.
T Consensus 168 ~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999877654444333
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.87 E-value=1.2e-20 Score=187.35 Aligned_cols=334 Identities=15% Similarity=0.080 Sum_probs=207.9
Q ss_pred hHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh----hcch-HHHHHHHHHHHHHHHHHHhhhc------H
Q 009250 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCR-RTFQIDTIPLILGAIISAQAHS------L 177 (539)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~ 177 (539)
....+.+++|+ +..++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....++ +
T Consensus 32 l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 32 LAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 45677888999 89999999999999999999999999998 7874 5566777777777766555543 4
Q ss_pred HHHHHHHHHhhhchhhhhhhHHHHHHhcC-CCCccccchhhhHHHHHHHHHHHHHhcC----CCCC---CcchhHHHHHh
Q 009250 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGI----PAED---DPHWWRTMLYI 249 (539)
Q Consensus 178 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~----~l~~---~~~~wr~~f~~ 249 (539)
..+++..++.+++.......-.++..|+. +++||.+..++...+..+|..+++.+.. .+.. ..+ |+..+.+
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g-~~~~~~i 188 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKG-YFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh-HHHHHHH
Confidence 55666666777777777777788999988 4578998888887777777776654332 2221 234 9988888
Q ss_pred hHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHH
Q 009250 250 ASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (539)
Q Consensus 250 ~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (539)
.++++++..+..++ .+|.++. .++++.+.....+.+++++.++...
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~---------------------------------~~~~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTP---------------------------------EVDNSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCC---------------------------------CCcCCCCHHHHHHHHhCCchHHHHH
Confidence 88877766554443 4443110 0001111234566777888776655
Q ss_pred HHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHH
Q 009250 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
...++...... .......++.+..... ............+.+. ++.++.+++.||+|+|+.+..+.++..+
T Consensus 236 ~~~~~~~~~~~----~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~i----i~~~~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 236 IFNVVLLTAVV----TRGGATLYYVNYVLLR-PDLATLFLVTGMIAGL----FGALLSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred HHHHHHHHHHH----HHhhhhheeeeeecCC-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 54433332221 1112222222222112 2122222223333332 2278899999999999988877765554
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------cccccchhhHHHHHHHHHHHHHH
Q 009250 409 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
..+.+.+.. ..+.+...+...+...+.+ ...+..+++++|..+ .+..|...|+.+.+..+|.++++
T Consensus 307 ~~~~~~~~~------~~~~~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~ 379 (444)
T PRK09669 307 LSALIFFIP------PSNVWLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGG 379 (444)
T ss_pred HHHHHHHhC------cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHH
Confidence 333332211 0111222222222222222 234666777777764 33456678899999999999999
Q ss_pred HHHHHHHHHhCcc
Q 009250 482 LFFLDLVETFGVA 494 (539)
Q Consensus 482 ~~~~~l~~~~g~~ 494 (539)
.+.|.+.+..||.
T Consensus 380 ~i~g~ll~~~Gy~ 392 (444)
T PRK09669 380 AVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999988873
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.87 E-value=5.1e-21 Score=189.46 Aligned_cols=384 Identities=13% Similarity=0.002 Sum_probs=233.5
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhc-----chHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQIDTIP 163 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~ 163 (539)
+.++...++..++.........+.+.+++|+ +..+++...+...+...+-.+ +|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 4455556677777744444556777778999 889999999999999998666 999999998 77877888777
Q ss_pred HH-HHHHHHHhhhcHHHHHH-HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhh---HHHHHHHHHHHHHhcCCCCC
Q 009250 164 LI-LGAIISAQAHSLDEMLW-GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC---QVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 164 ~~-~~~~~~~~a~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~G~~~~~~~~~~l~~ 238 (539)
.+ ++....+..++.....+ ..++.+++.+...++..++..|..+ +++....+.. ....++|.++++.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 44344444456544444 8999999999999999999999998 5554443333 33445899999999999988
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhh
Q 009250 239 DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSEL 318 (539)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (539)
..+ ||..|++.+++.++..+...+++|++.....+.+.++... ..... . ......+ +.....+..
T Consensus 184 ~~~-~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~------~~~~~-~---~~~~~~~----~~~~~l~~~ 248 (468)
T TIGR00788 184 KTL-TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMN------MALLT-L---GVLANVK----VQILGLRGA 248 (468)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHhcccccccccccccccchhh------hhhhh-h---hHHHHHH----HHHHHHHHH
Confidence 878 9999999988888776666677775310000000000000 00000 0 0000000 001122333
Q ss_pred hccCchhHHHHHHHH-HHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCch
Q 009250 319 LEEPHSRVAFIGGAL-FLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQK 397 (539)
Q Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~ 397 (539)
++++..+..++..++ +... . .. ....+. ...+..+.+.. ..+.......+..+++ ..+.+++.+|++.|+
T Consensus 249 l~~~~i~~~l~fifl~~~~~-~-~~-~~~~f~-~~~~~lG~s~~-~~G~~~~~~~v~~i~g----~~~~~~~~~~~~~r~ 319 (468)
T TIGR00788 249 IQLLEIAKPLIFIFLSYANL-P-GA-SGSVFC-ATTQCLPGGPS-FSGMSKVVGNLGSLCG----VGGYDRFLKTFPYRL 319 (468)
T ss_pred HhcHHHHHHHHHHHHHHhhc-C-CC-CceeEE-EEcccCCCCcc-hhhhHHHHHHHHHHHH----HHHHHHHHhhCCHHH
Confidence 455544443332222 1111 1 11 101111 11123454443 4555544444444333 888888889999999
Q ss_pred hhHhhHHHHHHHHHHHHHHhcCCC-Ccc-chhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHH
Q 009250 398 LLIGSYLGMAISMLLVVGATSLPL-DED-FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV 475 (539)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 475 (539)
++.++.++.+++.+.......... ... ...+.......+...+.+....+. ..++.+..|++.+|+.+|+.+++.++
T Consensus 320 ~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~l 398 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHL 398 (468)
T ss_pred HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHH
Confidence 988888877776654322110000 000 011122222333333444444443 57788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-----cchhhHHHH
Q 009250 476 CNFLVGLFFLDLVETFG-----VAPVYAGFG 501 (539)
Q Consensus 476 g~~~~~~~~~~l~~~~g-----~~~~~~~~~ 501 (539)
|..+++.+.+.+.+..| +...+.+..
T Consensus 399 g~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~ 429 (468)
T TIGR00788 399 GSSVSGFLGVLLMETIGITCDNSNNLWLLIL 429 (468)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccchHHHHH
Confidence 99999999999999888 555444333
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.86 E-value=3.7e-20 Score=184.80 Aligned_cols=356 Identities=11% Similarity=0.029 Sum_probs=211.7
Q ss_pred HHHhhhhhcccccchhH-HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh----hhcc-hHHHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGC-RRTFQIDTIPLILG 167 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~ 167 (539)
++.+...+..+.+.+.+ ..+.+.+|+ +..++|.+..+..+.-++..|+.|.++| |+|| |+.++++.+..+++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 33333444444444444 456667798 9999999999999999999999999999 6698 66667788887877
Q ss_pred HHHHHhhhc------HHHHHHHHHHhhhchhhhhhhHHHHHHhcC-CCCccccchhhhHHHHHHHHHHHHHhcCC----C
Q 009250 168 AIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIP----A 236 (539)
Q Consensus 168 ~~~~~~a~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----l 236 (539)
.+++-..++ +..+++.-++.+++.....+...++..|.. +++||.+..++-..+.++|..+.+.+... +
T Consensus 91 ~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 91 LFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666644332 334555667778888888888889999998 58899998888666666665444333221 1
Q ss_pred ---CCCcchhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCc
Q 009250 237 ---EDDPHWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD 312 (539)
Q Consensus 237 ---~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (539)
.+..+ |+....+.+++.++..+..++ .+|.++. .. .+..++++.+.+
T Consensus 171 g~~~~~~g-~~~~~~i~~~~~~~~~~~~~~~~~e~~~~----~~------------------------~~~~~~~~~~~~ 221 (473)
T PRK10429 171 GGGDRGFG-FQMFTLVLIAFFIVSTIITLRNVHEVYSS----DN------------------------QVSAEGSHLTLK 221 (473)
T ss_pred CCCchhhh-HHHHHHHHHHHHHHHHHHHHcCceecCCc----cc------------------------cccccccCCCHH
Confidence 11223 888887777776665544433 5554210 00 000000111122
Q ss_pred chhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh
Q 009250 313 SQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK 392 (539)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr 392 (539)
+.++.+++++.++..+...++... .......+.+++.+....... ..+....+..+..++ +.++.+++.||
T Consensus 222 ~~~~~~~~n~~~~~ll~~~~~~~~----~~~~~~~~~~y~~~y~~~~~~-~~~~~~~~~~i~~ii----~~~~~~~l~~r 292 (473)
T PRK10429 222 DIVALIYKNDQLSCLLGMALAYNI----ASNIINGFAIYYFTYVIGDAD-LFPYYLSYAGAANLV----TLILFPRLVKS 292 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHH----HHHHHhhheeeEEEEECCCHH-HHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 334445566554444333333222 222333333444443333222 233333333333322 28899999999
Q ss_pred cCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------cccccch
Q 009250 393 EGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKI 465 (539)
Q Consensus 393 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~ 465 (539)
+|+|+.+..+..+..++.+.+....... ....+..++...+...+.+. ..+...++.+|..+ .+..|..
T Consensus 293 ~gkk~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~g~~~~~-~~~~~~am~ad~id~~e~~tG~R~~G~~ 368 (473)
T PRK10429 293 LSRRILWAGASIFPVLSCGVLLLMGLAA---PHNALLIVIAGILLNIGTAL-FWVLQVIMVADTVDYGEYKLGIRCESIA 368 (473)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhccC---chhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhHhcCccchhHH
Confidence 9999998877776665554443321111 11122222222222222222 23445667777754 3445668
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 009250 466 MGFSFSVHWVCNFLVGLFFLDLVETFGV 493 (539)
Q Consensus 466 ~g~~~~~~~~g~~~~~~~~~~l~~~~g~ 493 (539)
+|....+..++..+++.+.|.+.+..||
T Consensus 369 ~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 369 YSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999999999999988876
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.85 E-value=2.7e-19 Score=176.66 Aligned_cols=337 Identities=17% Similarity=0.158 Sum_probs=233.1
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh----hhcchHHH-HHHHHHHHHHHHHHHhh-h------
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTF-QIDTIPLILGAIISAQA-H------ 175 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~a-~------ 175 (539)
...+.+.+.+|+ ++...|.+..+..+-.++..|+.|.++| |+||||.. ++|.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 345677788899 8999999999999999999999999999 89976555 46778888888777765 4
Q ss_pred -cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCC-CCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc------hhHHHH
Q 009250 176 -SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH------WWRTML 247 (539)
Q Consensus 176 -~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~------~wr~~f 247 (539)
....+.+.-++..++.......-.++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23345677777799999899999999999998 5789999999988888988766666655543222 499999
Q ss_pred HhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhH
Q 009250 248 YIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (539)
++.+++.++..++..+ .+|+++ +.+.++++.+.++.++.+++++.++.
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~-------------------------------~~~~~~~~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSV-------------------------------EVTEQEKKISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred HHHHHHHHHHhhhhhheeeeccc-------------------------------cccccccccccccchhhhcccchHHH
Confidence 9988888877766555 455110 01112223334556778888888777
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHH
Q 009250 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGM 406 (539)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 406 (539)
......+.............++..+.+++ +. .......+..+.+.++ .++.++++||+|+|+.+..+.++.
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~----~~-~~~~~~~~~~~~~~v~----~~~~~~l~~r~gk~~~~~~~~~~~ 300 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGN----EG-LISIFMLIFFVASIVG----SPLWGRLSKRFGKKKVYIIGLLLA 300 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcC----ch-hhHHHHHHHHHHHHHH----HHHHHHHHHHccceeehhhhHHHH
Confidence 66665555443333333333333333322 21 2233333333333222 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccC-------cccccchhhHHHHHHHHHHH
Q 009250 407 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNF 478 (539)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~ 478 (539)
+++.+++.+... .............+.+. ......+++.+|..+ ++..|...|+.+....++..
T Consensus 301 ~~~~~~~~~~~~--------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~ 372 (428)
T PF13347_consen 301 ALGFLLLFFLGP--------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG 372 (428)
T ss_pred HHHHHHHHHHHh--------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH
Confidence 988888776431 12222222222333322 234666778888776 34568899999999999999
Q ss_pred HHHHHHHHHHHHhCcc
Q 009250 479 LVGLFFLDLVETFGVA 494 (539)
Q Consensus 479 ~~~~~~~~l~~~~g~~ 494 (539)
+++.+.+.+.+..|+.
T Consensus 373 la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 373 LAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHHHhCcC
Confidence 9999999998887754
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.84 E-value=9.8e-20 Score=170.97 Aligned_cols=383 Identities=15% Similarity=0.078 Sum_probs=233.7
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHH-HhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH--
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI-- 165 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~-- 165 (539)
.+......+...+..++..|..+...+ +-|+ +..++|.+.++..+...+.+++.|.++||+|.||-++..+.+..
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 444455555666667777788876665 4899 99999999999999999999999999999997776554433322
Q ss_pred HHHHHH-Hhh----hcH-HHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 166 LGAIIS-AQA----HSL-DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 166 ~~~~~~-~~a----~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
.+.... .+. .|. ...+++-+..|+...+..|+.-+++.++. ++.+.=.|-.-++.++|.+++..++|.+.+.
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 222221 222 232 23334445556655566666666665554 3345556667788889999998888888754
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCc---chh
Q 009250 240 PHWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD---SQW 315 (539)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 315 (539)
. -+..||+....+++..++..+ .|+.++..... +....++++ ...
T Consensus 165 ~--p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~ 213 (412)
T PF01306_consen 165 N--PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-----------------------------DALGAKKDKVSLKDV 213 (412)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-----------------------------TTSSS------HHHH
T ss_pred C--ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-----------------------------cccccCCCCCcHHHH
Confidence 3 467788766665555544433 33332100000 000001111 223
Q ss_pred hhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCC
Q 009250 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGR 395 (539)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~ 395 (539)
.++++++++|...+....... .+.......+.++.....+.. ....+++...-.+.+.+.+.-.+..++.+|+|.
T Consensus 214 ~~l~k~~~fw~~~l~v~g~~~----~Y~vfdqqf~~y~~~~f~~~~-~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~ 288 (412)
T PF01306_consen 214 LSLFKMRNFWFFVLFVIGVAA----IYDVFDQQFPIYFASFFQSAG-QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA 288 (412)
T ss_dssp HHHTTSHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTSSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHhcchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcccc-cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 466677766664443332222 344444445555555443332 333344444444444455558899999999999
Q ss_pred chhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHH-HHHHH
Q 009250 396 QKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFS-FSVHW 474 (539)
Q Consensus 396 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~ 474 (539)
|+.++++..++.+=....++.. +.+.....-.+-..-+.... ....-++++.+|++..++...+. +...+
T Consensus 289 k~~Lllag~i~~iRi~~~~~~~--------~~~~i~~~klLH~~e~~l~l-va~fkYI~~~fd~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 289 KNLLLLAGVIMAIRIIGSGFAT--------NPWVISLIKLLHALEFPLLL-VAAFKYITAHFDKRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----------SHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred HhHHHHHHHHHHHHHHHHhhhc--------chHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence 9999999998888887777632 22333333333333332222 23456788999999888888885 57778
Q ss_pred HHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 475 VCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 475 ~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
++.++.+.+.|.++|+.|++.+|++.+.+.+...++..+.+++.++
T Consensus 360 ~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 360 IGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9999999999999999999999999998888887777766655444
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=1.2e-18 Score=173.36 Aligned_cols=348 Identities=13% Similarity=0.090 Sum_probs=199.3
Q ss_pred HHhhhhhcccccchh-HHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh----cchHHH-HHHHHHHHHHH
Q 009250 95 SNFLFGYHIGVMNGP-IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL----GCRRTF-QIDTIPLILGA 168 (539)
Q Consensus 95 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~ 168 (539)
+.+..........+. .+.+.+.+|+ +..++|.+.+...+..++..++.|+++||. ||||.+ .++.+...+..
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 333333333333333 3567777899 899999999999999999999999999996 777654 55655555444
Q ss_pred HHH-Hh----hhc--HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCC-CccccchhhhHHH-----HHHHHHHHHHhcCC
Q 009250 169 IIS-AQ----AHS--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVG-----TCLGIITSLFLGIP 235 (539)
Q Consensus 169 ~~~-~~----a~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~~~~~~~~~ 235 (539)
++. .. +++ ...+++.-++.+++.+...+...++..+...+ ++|.+..++-..+ ..+|..++|.++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 94 VLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 443 22 111 23344456677888888887777777776654 6788776655433 33556666666654
Q ss_pred CCCCcc-hhHHHHHhhHHHHHHHHHHh-cccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcc
Q 009250 236 AEDDPH-WWRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDS 313 (539)
Q Consensus 236 l~~~~~-~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (539)
...... .|.....+.++++++..++. ...+|+++ .+.++...+.
T Consensus 174 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~----------------------------------~~~~~~~~~~ 219 (448)
T PRK09848 174 SPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVV----------------------------------RIVAQPSLKI 219 (448)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccC----------------------------------CCccCCCHHH
Confidence 322111 12222223333333332222 23444321 0001111223
Q ss_pred hhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc
Q 009250 314 QWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE 393 (539)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~ 393 (539)
.++.+++++.+....+...+... .........+++.++....+............+.. +++.++.+++.||+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~r~ 291 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLI----STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGT----VASAPLVPGMVARI 291 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHH----HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHh
Confidence 45667888776655444444333 22333334555555433333322222222112222 22388999999999
Q ss_pred CCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCc-------ccccchh
Q 009250 394 GRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSN-------RTRGKIM 466 (539)
Q Consensus 394 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~ 466 (539)
++|+.+.++.++..++.+.+.+.. ..+.+.......+...+.+. ..+...+...|..|. +..|...
T Consensus 292 g~~~~~~~g~~~~~i~~~~~~~~~------~~~~~~~~~~~~l~g~G~~~-~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 292 GKKNTFLIGALLGTCGYLLFFWVS------VWSLPVALVALAIASIGQGV-TMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcC------chhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 999999998888777766654421 01122222222222222222 234455666666654 3468999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 009250 467 GFSFSVHWVCNFLVGLFFLDLVETFGV 493 (539)
Q Consensus 467 g~~~~~~~~g~~~~~~~~~~l~~~~g~ 493 (539)
|+.+....+|..+++.+.+.+.+..||
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999888776
No 110
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.82 E-value=2.2e-19 Score=170.47 Aligned_cols=398 Identities=15% Similarity=0.184 Sum_probs=240.3
Q ss_pred CchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcc-hHHHHHHH
Q 009250 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDT 161 (539)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~ 161 (539)
+..|+.+.+..+.+++.....+++.+..-.+.++++.+.+....||+.++..++.+++++.+|++..|.+. |+.++.|.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 34566788888999999999999999887888887776688888999999999999999999999999997 88899999
Q ss_pred HHHHHHHHHH-Hhh---h-cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 162 IPLILGAIIS-AQA---H-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 162 ~~~~~~~~~~-~~a---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
++..+|+++. ++. + ..+.++++|++.|+|.| ......+|+++....++|.++++....+..+|.++||.++..+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999998 332 3 67889999999999987 6778889999998889999999999888888888887776544
Q ss_pred CCCc------------chhHHHHHhhHHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009250 237 EDDP------------HWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (539)
Q Consensus 237 ~~~~------------~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (539)
.... +-+-.+-|+.+++.++.++...+ +.|.++-...+. ..++
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~--------------------~~~~---- 244 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKK--------------------KRSV---- 244 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccc--------------------cccc----
Confidence 3211 11445667777777777665544 555442100000 0000
Q ss_pred HHhcCCCCcchhhhhhc-cCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh---HHHHHHHHHHHhcccccc
Q 009250 304 IKKDGSDLDSQWSELLE-EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG---ALASLLVGVTNFAGLRSE 379 (539)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~ 379 (539)
++. +....+... +..+...+++....+...+.....-....+......+.... ...+...++..+....-
T Consensus 245 --~~~---~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~- 318 (488)
T KOG2325|consen 245 --EEE---KSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVIL- 318 (488)
T ss_pred --hhh---ccchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHH-
Confidence 000 000001111 11122222333333333332222223333333333343322 23333333333333111
Q ss_pred cchhhhHHHHh-hhcCCchhhHhhHHHHHHHHHHHHHHhcCCCC-----c-----------cc------hhhHHHHHHHH
Q 009250 380 KYCALCASYLM-DKEGRQKLLIGSYLGMAISMLLVVGATSLPLD-----E-----------DF------SHNLSILGTLF 436 (539)
Q Consensus 380 ~~~~~~~g~l~-dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----------~~------~~~~~~~~~~~ 436 (539)
.+...... .++.+|..+..+++.......+......+... . ++ .+.........
T Consensus 319 ---~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i 395 (488)
T KOG2325|consen 319 ---LLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFI 395 (488)
T ss_pred ---HHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehh
Confidence 22222222 23344555555544333333322211110000 0 00 00111111111
Q ss_pred HHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 437 YIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 437 ~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+.++.+.-. .....++-+|...+..+++..|+.......+..++|.+...+....|+++...+.+...++...+...+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 112222111 123445667888999999999999999999999999999999999999887776666666555544333
No 111
>PRK11462 putative transporter; Provisional
Probab=99.82 E-value=4.7e-18 Score=168.32 Aligned_cols=333 Identities=13% Similarity=0.047 Sum_probs=200.3
Q ss_pred hHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh----hcchH-HHHHHHHHHHHHHHHHHhhhc------H
Q 009250 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRR-TFQIDTIPLILGAIISAQAHS------L 177 (539)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~------~ 177 (539)
....+.+.+|+ ++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+..+++.+++-..++ .
T Consensus 32 l~~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 32 MMFFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 34456677899 99999999999999999999999999995 78865 455577778877776654443 3
Q ss_pred HHHHHHHHHhhhchhhhhhhHHHHHHhcCC-CCccccchhhhHHHHHHHHHHHHHhcCCCCCC------cchhHHHHHhh
Q 009250 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------PHWWRTMLYIA 250 (539)
Q Consensus 178 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~~wr~~f~~~ 250 (539)
..+++.-++..++.......-.++..|..+ ++||.+..++...+..+|..+++.+...+... ..+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 445566667788888888888899999987 78899999999999888877775554322211 11388877777
Q ss_pred HHHHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH
Q 009250 251 SLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI 329 (539)
Q Consensus 251 ~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (539)
+++.++..++.++ .+|.++. ++++.+.+...+..++++.++....
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~----------------------------------~~~~~~~~~~l~~~~~Nk~~~~l~~ 235 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA----------------------------------PPTTTSMREDLRDIWQNDQWRIVGL 235 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC----------------------------------CccCCCHHHHHHHHhCChHHHHHHH
Confidence 7776666544443 3442210 0001112234556667766655544
Q ss_pred HHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHH
Q 009250 330 GGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAIS 409 (539)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 409 (539)
...+.............++..+++ .... ..........+.++++ .++++++.||+++|+.+..+..+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~----g~~~-~~~~~l~~~~i~~iig----~~l~~~l~~r~gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWIL----GTPE-VFVAFLTTYCVGNLIG----SALAKPLTDWKCKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhc----CChH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 333333332222233333333332 2222 2222223333333222 889999999999998876554443333
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------cccccchhhHHHHHHHHHHHHHHH
Q 009250 410 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
.+++.+.. ........+..++.+.+. ....+..+++.+|..+ .+..|..++.......+|.++++.
T Consensus 307 ~~~~~~~~------~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~ 379 (460)
T PRK11462 307 SLAMFFVP------MQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGA 379 (460)
T ss_pred HHHHHHhc------hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 33322211 011111222222222221 2223444555666554 333355567777889999999999
Q ss_pred HHHHHHHHhCc
Q 009250 483 FFLDLVETFGV 493 (539)
Q Consensus 483 ~~~~l~~~~g~ 493 (539)
+.|.+.+..||
T Consensus 380 i~g~iL~~~Gy 390 (460)
T PRK11462 380 LIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHcCC
Confidence 99999887776
No 112
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.81 E-value=2.4e-17 Score=161.33 Aligned_cols=362 Identities=16% Similarity=0.120 Sum_probs=223.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH-HHHHHHHHHHHHHhh-h-cHHHHHHHHHHhhhchhhhhhhHHH
Q 009250 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGAIISAQA-H-SLDEMLWGRFLVGLGIGVNTVLVPI 200 (539)
Q Consensus 124 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~a-~-~~~~l~~~r~l~G~~~~~~~~~~~~ 200 (539)
+..++..++..+..++..|+.|.++|+-|+||.++. ..++..+++.+..+. + +++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445778889999999999999999999987766555 555555666666664 3 4544555566666788888889999
Q ss_pred HHHhcCCCCcc--------------------------ccchhhhHHHHHHHHHHHHHhcCCCCCCcc-------hhHHHH
Q 009250 201 YISEVAPTKYR--------------------------GSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WWRTML 247 (539)
Q Consensus 201 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-------~wr~~f 247 (539)
++.|..+++++ ++..+.-.....+|.++...+...+....+ .-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 898888888888888777665543321111 158888
Q ss_pred HhhHHHHHHHHH-HhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhH
Q 009250 248 YIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (539)
Q Consensus 248 ~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (539)
.+.++.-++..+ ..+++||.|+. +.. +.... .... .-++....++++.+.+....
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~---~~~-~~~~~----------------~~~~----g~~~l~~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGP---RPL-PSGSS----------------YLRF----GFKRLWRTFKEIRKLRQLFL 285 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC---CCC-Ccchh----------------HHHH----HHHHHHHHHHHHHhChHHHH
Confidence 888887666554 44556666531 000 00000 0000 00001123334433333333
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCc--hhhHhhH
Q 009250 327 AFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQ--KLLIGSY 403 (539)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r--~~~~~~~ 403 (539)
.++.. +....+.+.+..+...+.. ..+++.. .......+.++.+.+| +++.|++.||+|.| +++..+.
T Consensus 286 fLia~----~l~~dg~~ti~~~~~i~a~~~lg~s~~-~l~~~~l~~~i~a~~G----a~~~g~l~~r~g~k~~~~l~~~l 356 (477)
T PF11700_consen 286 FLIAY----FLYSDGVNTIISFAGIYATEVLGMSTT-QLIVFGLVVQIVAIIG----ALLFGWLQDRFGPKTKRTLLISL 356 (477)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHhcCcCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCCchhHHHHHHH
Confidence 33322 2222344455555555554 6677655 3334444444444333 99999999999998 6666655
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLF 483 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 483 (539)
+...+..+...+.. .+..-...+.+......+..+.+..+.++..-++.+|+.|+++.+..+|++.......+.+||.+
T Consensus 357 ~~~~~i~~~g~~G~-~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 357 ILWIIIPLYGLFGF-WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred HHHHHHHHHHHHHh-hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 55532222211100 00000012222233333333333344467777899999999999999999999999999999999
Q ss_pred HHHHHHHhC-cchhhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 484 FLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 484 ~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
+|.+.+..| .+..+....++.+++.++. ..++..|+
T Consensus 436 ~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g 472 (477)
T PF11700_consen 436 FGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKG 472 (477)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhh
Confidence 999999988 6777777777777766655 44444433
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.80 E-value=2.9e-18 Score=160.32 Aligned_cols=277 Identities=16% Similarity=0.053 Sum_probs=178.0
Q ss_pred HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc-----------
Q 009250 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP----------- 240 (539)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~----------- 240 (539)
+...+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+..+++|..++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999998766321
Q ss_pred ----chhHHHHHhhHHHHHHHHHHhccc--ccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcch
Q 009250 241 ----HWWRTMLYIASLPGFILALGMQFT--VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ 314 (539)
Q Consensus 241 ----~~wr~~f~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (539)
.+|+++|++.+.+.++..+.+.+. ||..+ +.++ + ..+++ ...
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~-------------------~-----~~~~~--~~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA-------------------R-----VSSGD--TTQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc-------------------c-----ccccc--ccc
Confidence 239999997776655555444343 43210 0000 0 00000 001
Q ss_pred hhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc---CCChhHHHHHHHHHHHhcccccccchhhhHHHHhh
Q 009250 315 WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV---GITDGALASLLVGVTNFAGLRSEKYCALCASYLMD 391 (539)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d 391 (539)
.++.++++..+. ..+..+...+.-.....+.+.|+.+. +.+. ...+...+.......+| +++.+++.|
T Consensus 133 ~~~~~~~~~~~l----~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~-~~a~~~~s~~~~~~~iG----r~~~~~l~~ 203 (310)
T TIGR01272 133 KTSAFQFTHLVL----GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPE-DQAAHFTAYTWGGAMVG----RFIGSAVMP 203 (310)
T ss_pred hhhHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCH-HHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 122333333332 22333333333445555667777543 4443 34444455554444444 999999999
Q ss_pred hcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHH
Q 009250 392 KEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFS 471 (539)
Q Consensus 392 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 471 (539)
|+++|+.+.++..+..++.+++... +.....+...+.+ .+.....|...+...+..|++ .+++.++. .
T Consensus 204 r~g~~~~l~~~~~l~~~~~~l~~~~---------~~~~~~~~~~l~g-~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~ 271 (310)
T TIGR01272 204 MISQGRYLAFNAFLAVLLSIGAALT---------HGYVAMWFVLALG-LFNSIMFPTIFSLALNALGRH-TSQGSGIL-C 271 (310)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-H
Confidence 9999998887777666655443331 1111222222222 222334566666677777764 56777775 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Q 009250 472 VHWVCNFLVGLFFLDLVETFGVAPVYAGFG 501 (539)
Q Consensus 472 ~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 501 (539)
+..+|+++.|.+.|.+.|..|.+.++++..
T Consensus 272 ~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 272 LAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 788999999999999999999887776433
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.1e-17 Score=158.78 Aligned_cols=334 Identities=17% Similarity=0.145 Sum_probs=222.9
Q ss_pred HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh----hcc-hHHHHHHHHHHHHHHHHHHhhhc------HHH
Q 009250 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGC-RRTFQIDTIPLILGAIISAQAHS------LDE 179 (539)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~a~~------~~~ 179 (539)
-.+.+.+|+ ++..+|.+..+--+--++..|+.|.+.|| +|| |+.++++.+..++.+.++-.+++ ...
T Consensus 37 ~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~y 114 (467)
T COG2211 37 FFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIY 114 (467)
T ss_pred HHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHH
Confidence 456677888 89988999999999999999999999995 787 45666688889999998887774 444
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCC-CCccccchhhhHHHHHHHHHHHHHhcC----CCCCC--cchhHHHHHhhHH
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGI----PAEDD--PHWWRTMLYIASL 252 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~----~l~~~--~~~wr~~f~~~~~ 252 (539)
.++.-.+.+++.......-.++..|..+ ++||.+..++-+.+..+|..+...+.. .+.+. ..+|+...++.++
T Consensus 115 a~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~v 194 (467)
T COG2211 115 ALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGV 194 (467)
T ss_pred HHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHH
Confidence 6667888899999888888889999886 688999999999988888655433332 22222 1238888888888
Q ss_pred HHHHHHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHH
Q 009250 253 PGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (539)
Q Consensus 253 ~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (539)
++++..+.+++ ..|.+.. ....++..+.+.+..+..+++|+.+....+..
T Consensus 195 i~~i~~l~~~~~v~ER~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~ 245 (467)
T COG2211 195 IGVILLLFCFFNVKERVVE-----------------------------TQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMN 245 (467)
T ss_pred HHHHHHHHHHHHhhcccCc-----------------------------cccCcccccccHHHHHHHHHccchHHHHHHHH
Confidence 88877776665 4443210 00000001111222344567777666555544
Q ss_pred HHHHHhhhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHH
Q 009250 332 ALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAIS 409 (539)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 409 (539)
.+.............+|..+.+ +..+. ...........+++ .++..++.+|+|+|+++.++.++..++
T Consensus 246 l~~~~~~~i~~s~~~yy~~y~l---g~~~l~~~~~~~~~~~~~l~~-------~~~~p~L~~~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 246 LLLFIAFNIRGSIMVYYVTYVL---GDPELFAYLLLLASGAGLLIG-------LILWPRLVKKFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred HHHHHHHHHHhhhhheeEEEEc---CChHHHHHHHHHHHHHHHHHH-------HHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence 4433322222222233332222 22222 12233334444444 788999999999999999999999998
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccC-------cccccchhhHHHHHHHHHHHHHH
Q 009250 410 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVG 481 (539)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~ 481 (539)
.+++.+.. .+...++.+.....+.+.+ ..+..+++++|..+ .+..|...|...++.-+|.+++.
T Consensus 316 ~~~~~f~~--------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 316 YLLLYFTP--------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred HHHHHhhc--------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 88887744 2223333333233333333 35677888887754 44668889999999999999999
Q ss_pred HHHHHHHHHhCc
Q 009250 482 LFFLDLVETFGV 493 (539)
Q Consensus 482 ~~~~~l~~~~g~ 493 (539)
.+.|++.+..||
T Consensus 388 ~~~g~~L~~~Gy 399 (467)
T COG2211 388 FIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHcCC
Confidence 999999988875
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.78 E-value=6.3e-17 Score=151.96 Aligned_cols=416 Identities=15% Similarity=0.090 Sum_probs=253.9
Q ss_pred HHHHHHHHhhhhhccccc-chhHHHHHHHhC----CCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVM-NGPIVSIAKELG----FEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTI 162 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~ 162 (539)
+..+...-+...++..-+ .+..-++..+++ + |+.++.-+.+.|..-.-+..+++|+++|| +|+|+++..|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 555555666666655333 334456666666 6 77777888888888888999999999999 599999999999
Q ss_pred HHHHHHHHHHhhh--cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC--ccccchhhhHHHHHHHHHHHHHhcCCCCC
Q 009250 163 PLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 163 ~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 238 (539)
++.+|.++.+.+. +...++++-++.++|.|..=+....+++|.+|++ +|-..++++.++.++|..++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999984 7889999999999999999999999999999864 37788999999999999999999999999
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccc---------hHHHHhcCChhHHHHHH----HHH--cCCcchHH--HHHH--
Q 009250 239 DPHWWRTMLYIASLPGFILALGMQFTVES---------PRWLCKGGMLNDAKAVI----ANL--WGESEINK--AIEE-- 299 (539)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~~~~~~~~~----~~~--~~~~~~~~--~~~~-- 299 (539)
..+ |...|.+.++-..+.++..+..++. |..+..+.......... ... ...+.+.. ....
T Consensus 181 ~~g-~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 259 (498)
T COG3104 181 NYG-WHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVIS 259 (498)
T ss_pred hhC-HHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 9999999888877776665554321 11111111110000000 000 00000000 0000
Q ss_pred HHHHH---HhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHc--CCC-hhHHHHHHHHHHHh
Q 009250 300 FQLVI---KKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV--GIT-DGALASLLVGVTNF 373 (539)
Q Consensus 300 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~ 373 (539)
..... .+.-+.++.. .+..|......+++...+++....-..+.+..|.....++. |++ ++.+...+-.+..+
T Consensus 260 i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Ii 338 (498)
T COG3104 260 ILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFII 338 (498)
T ss_pred HHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHH
Confidence 00000 0000000100 11111111112222223333333323333444444333322 111 12222222233323
Q ss_pred cccccccchhhhHHHHhhhcCCc-------hhhHhhHHHHHHHHHHHHHHhcCCCC-ccchhhHHHHHHHHHHHHHhccc
Q 009250 374 AGLRSEKYCALCASYLMDKEGRQ-------KLLIGSYLGMAISMLLVVGATSLPLD-EDFSHNLSILGTLFYIFTFAIGA 445 (539)
Q Consensus 374 ~~~i~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 445 (539)
+. +++..++..|.+++ .-+.+++.+++.+++++......... +...+.++++...++....-...
T Consensus 339 i~-------~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~i 411 (498)
T COG3104 339 LF-------SPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFI 411 (498)
T ss_pred HH-------HHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 22 66666666664333 23556677777777766655222221 33344455555666666666777
Q ss_pred ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHH------HHHHhCcchhhHHHHHHHHHHHHhhheee
Q 009250 446 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD------LVETFGVAPVYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 446 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 515 (539)
.|+..+++....|+...+..+++.......+..++..+.+. ..+.......|+.++.+.++.........
T Consensus 412 SpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 412 SPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred CHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 88888999999999999999999888888888887777662 33444556677777777776666554443
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=3.1e-16 Score=144.00 Aligned_cols=353 Identities=16% Similarity=0.143 Sum_probs=223.5
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHH-HHHHHHHHHHHHHHHHhhhc--H-HHHHHHHHHhhhchhhhhhh
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT-FQIDTIPLILGAIISAQAHS--L-DEMLWGRFLVGLGIGVNTVL 197 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~a~~--~-~~l~~~r~l~G~~~~~~~~~ 197 (539)
++...+...++..+..++..|+.|.++|+.|+||. +-....+..+...+..++++ + +..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34566788889999999999999999999997654 44555666666666777655 4 44555678888899999999
Q ss_pred HHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhc---CCCC---------------CCcchhHHHHHhhHHHHHHHHH
Q 009250 198 VPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG---IPAE---------------DDPHWWRTMLYIASLPGFILAL 259 (539)
Q Consensus 198 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~---~~l~---------------~~~~~wr~~f~~~~~~~~~~~~ 259 (539)
-.+++.+..++++-++..++-.....+|..+.-++. .... +... =|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHh
Confidence 999999999998888877776666666655543332 0011 2223 78888888887776665
Q ss_pred Hhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhh
Q 009250 260 GMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQ 338 (539)
Q Consensus 260 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (539)
-.+ ..++.++ . +....++ . .+.-++.+.+++++.+.+....+++...++.
T Consensus 215 Pm~~~v~~~~~-~--~~~~~~~-------------------l----~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~--- 265 (438)
T COG2270 215 PMILNVHDAEK-I--SSPPPTA-------------------L----RNGFKELKSTFKEIRGRKNLVLFLIARFFYI--- 265 (438)
T ss_pred HHHhccccccc-c--cccchHH-------------------H----HHHHHHHHHHHHHHhcccchHHHHHHHHHHH---
Confidence 443 3444331 0 0000000 0 0000111234555555554444443333322
Q ss_pred hhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHh
Q 009250 339 FAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 417 (539)
Q Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 417 (539)
-+.+.+..+...+-. +.+.++. ...+.....++.+++| +++.|++.||+|.|+++..++++..+..+...+..
T Consensus 266 -DGv~til~~~~~fg~~~~gls~~-~lll~g~~~~vvA~lg----~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~ 339 (438)
T COG2270 266 -DGVNTILAMGGVFGAADLGLSST-ELLLIGIALSVVAALG----AIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE 339 (438)
T ss_pred -hhHHHHHHHHHHHHHHHcCccHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc
Confidence 245555555555555 6666654 3334444444444333 99999999999999998888887777666655521
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcc-hh
Q 009250 418 SLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVA-PV 496 (539)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~-~~ 496 (539)
.....+...+....+..+.+...-++..+..|+++.++.+|+++..+....+++|.+.+.+.+.+|.. ..
T Consensus 340 ---------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 340 ---------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred ---------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 12222333233333334456667789999999999999999999999999999999999999888743 33
Q ss_pred hHHHHHHHHHHHHhhheeeeCCCC
Q 009250 497 YAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
+.....+..++. +.+...|..++
T Consensus 411 ~~~i~vll~iGl-~~L~~v~~~~~ 433 (438)
T COG2270 411 VLSIIVLLLIGL-LLLLRVKVPGR 433 (438)
T ss_pred HHHHHHHHHhhH-hhEEeecCCCC
Confidence 444444444443 34455555433
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=6.1e-17 Score=160.21 Aligned_cols=309 Identities=17% Similarity=0.129 Sum_probs=217.1
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 166 (539)
..+.++++..+..++....+...+..+++.|++ ++.+.|++.+.+-++..+...+..+..-|.-|-+++.+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i--~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI--SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC--CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 446777888888888889999999999999999 777889999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--------------------h------------------------------c-HH-HHHHHHHHhhhchhhh
Q 009250 167 GAIISAQA--------------------H------------------------------S-LD-EMLWGRFLVGLGIGVN 194 (539)
Q Consensus 167 ~~~~~~~a--------------------~------------------------------~-~~-~l~~~r~l~G~~~~~~ 194 (539)
+++++++- + + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99999862 0 0 12 4667899999999999
Q ss_pred hhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC------------------cchhHHHHHhhHHHHHH
Q 009250 195 TVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------------------PHWWRTMLYIASLPGFI 256 (539)
Q Consensus 195 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------------------~~~wr~~f~~~~~~~~~ 256 (539)
++.+.+|+-|...+++-...+|++.....+|.++|.++|+++... .|.|+.-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865431 11288888899999888
Q ss_pred HHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHH
Q 009250 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLL 336 (539)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (539)
..+..+++|++.+-.. ++.++++ .+...+..+ .++......++-++.+...+.+++++.+ +...+...
T Consensus 335 ~a~p~f~fPk~lp~~~---~~~~~~~----~~~~k~~~~-~~~~~~~~~~~ikdfp~s~~~ll~N~if----~~~~l~~~ 402 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQ---KRKRARD----LHVLKTESG-GAKSDKTFGKKIKDFPKSIKRLLSNPIF----MLVVLASV 402 (735)
T ss_pred HHHHHHhCcccCcccc---ccchhhh----hcccccccc-cccCCcchhhhHHHHHHHHHHHhcCchH----HHHHHHHH
Confidence 8888888887642110 0000000 000000000 0000000000001122344556666544 33444444
Q ss_pred hhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCC--chhhHhhHHHHHHHHHH
Q 009250 337 QQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGR--QKLLIGSYLGMAISMLL 412 (539)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~--r~~~~~~~~~~~~~~~~ 412 (539)
.....+..+..|+|.|++.....++..+..+.+...+++ ..++.+++|++..|+.- |....+.++...+.++.
T Consensus 403 ~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~---~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 403 IESLAITGYITFLPKYLETQFGISASLANILTGSIGVPA---AAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhh---hhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 455567778889999998766555556666666655554 23448899999998754 44554444444444444
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.73 E-value=3.2e-19 Score=177.00 Aligned_cols=391 Identities=16% Similarity=0.143 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
++.+++..++..+..+.....+..+++.|++ ++.+.|++.+.+-++..+..++..++.+|..|-|.+..|.+++++++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~ 82 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHH
Confidence 4455666666677778888889999999999 89999999999999999999999999999888899999999999999
Q ss_pred HHHHhh----h----------------------------------------------cHHHHHHHHHHhhhchhhhhhhH
Q 009250 169 IISAQA----H----------------------------------------------SLDEMLWGRFLVGLGIGVNTVLV 198 (539)
Q Consensus 169 ~~~~~a----~----------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~ 198 (539)
+++++- + -+..++++.++.|+|....++.+
T Consensus 83 ~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 83 LLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred HHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 998751 0 02347788999999999999999
Q ss_pred HHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc---------------------chhHHHHHhhHHHHHHH
Q 009250 199 PIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFIL 257 (539)
Q Consensus 199 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 257 (539)
.+|+-|..++++-+..+|++.+...+|.++|.++|+.+...+ |.|..-|++.+++.++.
T Consensus 163 ~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 163 ITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998765310 12777777777777777
Q ss_pred HHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHh
Q 009250 258 ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQ 337 (539)
Q Consensus 258 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (539)
.+..+++|+.-+-..+ ..++.+....+....+..+...++......+..++.....+++++|+.+.. ..+....
T Consensus 243 aipl~~FPk~lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~----~~la~~~ 316 (539)
T PF03137_consen 243 AIPLFFFPKKLPGTSE--RQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMC----LILAGVF 316 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHcCCccCCCccc--ccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHH----HHHHHHH
Confidence 7777777765321100 000000000000000000000000000001112223344555666654433 3333344
Q ss_pred hhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC--CchhhHhhHHHHHHHHHHHHH
Q 009250 338 QFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG--RQKLLIGSYLGMAISMLLVVG 415 (539)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~ 415 (539)
.......+..+.|.|++.....++..+..+.++..+++ ..++.+++|++.+|++ .|..+....+...++.+.+..
T Consensus 317 ~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~---~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~ 393 (539)
T PF03137_consen 317 ESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPG---AALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSP 393 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcch---hheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHH
Confidence 44456677788999998765555556666666655544 3445899999999974 344444444444443333111
Q ss_pred H-----hc-------CCCC------c-------------------------cc-hhhHHHHHHH-HH-HHHHhccccccc
Q 009250 416 A-----TS-------LPLD------E-------------------------DF-SHNLSILGTL-FY-IFTFAIGAGPVT 449 (539)
Q Consensus 416 ~-----~~-------~~~~------~-------------------------~~-~~~~~~~~~~-~~-~~~~~~~~~~~~ 449 (539)
. .. .+.. . .. .......... ++ .+..+....|..
T Consensus 394 ~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~ 473 (539)
T PF03137_consen 394 LFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST 473 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh
Confidence 1 00 0110 0 00 0011111111 11 112222233433
Q ss_pred ccccccccCcccccchhhHHHHHHH-HHHHHHHHHHHHHHHHh
Q 009250 450 GLVIPELSSNRTRGKIMGFSFSVHW-VCNFLVGLFFLDLVETF 491 (539)
Q Consensus 450 ~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~l~~~~ 491 (539)
...-+.+|+++|+.+.|+...+.+ +|.+-+|.++|.++|..
T Consensus 474 -~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 474 -LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------------
T ss_pred -eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 445588999999999999998876 56678999999999863
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.71 E-value=8.3e-17 Score=161.62 Aligned_cols=181 Identities=15% Similarity=0.106 Sum_probs=139.6
Q ss_pred chhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH---HHhhhcHHHHHH
Q 009250 107 NGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII---SAQAHSLDEMLW 182 (539)
Q Consensus 107 ~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l~~ 182 (539)
...+|.+. +++|. +..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+++
T Consensus 270 ~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 270 LTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 34556544 56787 6666778888889999999999999999999999988887654443332 223456778888
Q ss_pred HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhc
Q 009250 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (539)
Q Consensus 183 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 262 (539)
++++.|++.+........++.|.+|++.|+.++++......++..++|.+.+++.+..++|+..+++..+.+++.++..+
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 99999998887777788889999999999999997544455556778888777766544488887777777777777777
Q ss_pred ccccchHHHHhc-----CChhHHHHHHHHHcC
Q 009250 263 FTVESPRWLCKG-----GMLNDAKAVIANLWG 289 (539)
Q Consensus 263 ~~~~~p~~~~~~-----~~~~~~~~~~~~~~~ 289 (539)
++||+|+|+.++ ++.+|+++.+.+++.
T Consensus 428 ~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 428 TMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred HhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 789999998755 888999999988873
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.68 E-value=4.6e-14 Score=130.36 Aligned_cols=330 Identities=18% Similarity=0.129 Sum_probs=212.4
Q ss_pred HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhc-----chHHHHH-HHHHHHHHHHHHHhh-----h-----
Q 009250 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQI-DTIPLILGAIISAQA-----H----- 175 (539)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~a-----~----- 175 (539)
.+..|+++ .....+.+.+...+.. ...+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 5 VMIvEL~v--pA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~ 81 (403)
T PF03209_consen 5 VMIVELGV--PAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS 81 (403)
T ss_pred hHHHHhcc--HHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 45678888 7777788887777654 46899999999999 8866665 556656655555543 2
Q ss_pred ---cH-H--HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 176 ---SL-D--EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 176 ---~~-~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
.+ + ...+.-.+.|+|.+...+...+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.+..-|..-.+
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 21 1 23446788999999999999999999999999999999999999999999999998877766533333333
Q ss_pred hH--HHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHH
Q 009250 250 AS--LPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (539)
Q Consensus 250 ~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (539)
.. ++.++..++..+-.|.+. .. .....++++......+++++.++..+++
T Consensus 162 ~~~a~i~~~l~~ia~wg~E~r~-~~---------------------------~~~~~~~~~~~f~~a~~~~~~~~~a~~f 213 (403)
T PF03209_consen 162 QGVALIALLLNLIALWGQEPRR-SR---------------------------RAAAAERPRPPFREAWRQVWASPQARRF 213 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccCC-cc---------------------------cccCCCCCCccHHHHHHHHHhCCChhHH
Confidence 22 222223333333334321 00 0001112223334567778888887776
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHH-HHcCCCh--hHHHHHHHHHHHhcccccccchhhhHHHHhh-hcCCchhhHhhH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTF-QDVGITD--GALASLLVGVTNFAGLRSEKYCALCASYLMD-KEGRQKLLIGSY 403 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d-r~g~r~~~~~~~ 403 (539)
+...++..+ .+......+..|- +.++.+. ........+...+.+ -.+.|++.. |.++++...+++
T Consensus 214 ~~fl~l~t~----a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G-------~~~~g~~l~~~~~~~~~a~~G~ 282 (403)
T PF03209_consen 214 FVFLFLGTL----AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLG-------MLLAGFLLSRRLGKKRTAALGC 282 (403)
T ss_pred HHHHHHHHH----HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCCchHHHHHHH
Confidence 665555444 2333333333333 3334442 233344455555555 666666655 678888888888
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-cccccccccccCcccccchhhHHHHHHHHHHHHHHH
Q 009250 404 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 482 (539)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 482 (539)
....+++.++....... ..+.+-...+.++++.|.. ....+...++..++..|..+|.....+.+...++..
T Consensus 283 ~~~~~~f~lii~a~~~~-------~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~ 355 (403)
T PF03209_consen 283 LLGALAFALIILAGPLG-------SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTF 355 (403)
T ss_pred HHHHHHHHHHHHHHhcc-------cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 88888877776644321 2333333444444444443 222344557778888999999999999999999999
Q ss_pred HHHHHHHH
Q 009250 483 FFLDLVET 490 (539)
Q Consensus 483 ~~~~l~~~ 490 (539)
+.|.+.|.
T Consensus 356 ~GG~~~D~ 363 (403)
T PF03209_consen 356 LGGALRDL 363 (403)
T ss_pred HHHHHHHH
Confidence 99988774
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=2.4e-15 Score=124.03 Aligned_cols=134 Identities=21% Similarity=0.326 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 209 (539)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 45567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 210 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
+|++..++.+....+|..+++.+++.+.+..+ |++.|++.++..++..+...++
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988877 9999999888877776655543
No 122
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.56 E-value=1.4e-13 Score=133.34 Aligned_cols=362 Identities=19% Similarity=0.153 Sum_probs=221.4
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHH----HHHHHHHHhhhhhhhhhhcchHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIF----IAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 162 (539)
.......+-.+..++......+..+.....++.+.+.. .+...... .+...+.++..|.++||+|||..+....+
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 34555555556666666666677777777666543332 23334443 57778899999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHhhhch--hhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc
Q 009250 163 PLILGAIISAQAHSLDEMLWGRFLVGLGI--GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (539)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 240 (539)
...+..++..+.. +|.++ +.|+.. +.......++++|....++|....++.......+..++|.+++.+.+..
T Consensus 101 ~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 101 GTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred HHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 9988888888776 33333 444433 3467788889999999999999999999999999999999999998877
Q ss_pred chhHHHHHhhHHHHHHHHHHhc-ccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhh
Q 009250 241 HWWRTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (539)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (539)
+ .-.+|.+..+..++..+... ++||+-. .+.+ +++. ...... ...........++...
T Consensus 176 ~-~a~~f~ia~~~~~~~~~y~~~~l~Esl~---~~~~-~~~~--~~~~~~--------------~~~~~~~~~~~~~~~~ 234 (463)
T KOG2816|consen 176 G-IALVFLIAAASGILSLLYMLLFLPESLQ---EKER-SDAT--LRELTP--------------GSLDSSHVADAFQSLT 234 (463)
T ss_pred C-chHHHHHHHHHHHHHHHHHhhccccccC---cccc-cccc--ccccCC--------------Ccccchhhhhhhhhhc
Confidence 7 78888888888887776554 4666531 0000 0000 000000 0000000011112222
Q ss_pred ccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhH-HHHhhhcCCch
Q 009250 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCA-SYLMDKEGRQK 397 (539)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-g~l~dr~g~r~ 397 (539)
+....+..+.......+..........-..+.+++ ..+.+.. ......+...+.+.++ .++. +.+...++.|+
T Consensus 235 ~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~-~~s~~~~~~~~~~~i~----~l~~~~~l~~~l~~~~ 309 (463)
T KOG2816|consen 235 KVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKK-EFSDLLSLVSILGIIS----QLLLLPLLSSILGEKR 309 (463)
T ss_pred ccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhh
Confidence 21111222221212111110000000000111222 2233333 3443344444444333 4444 47788889888
Q ss_pred hhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHH
Q 009250 398 LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 477 (539)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 477 (539)
....|+....+....+.+.. ..| ..........+.....|...+..+...+++++|.+.++...+..+.+
T Consensus 310 ~i~lGl~~~~~~~~~~af~~--------~~w--~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 310 LISLGLLSEFLQLLLFAFAT--------ETW--MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG 379 (463)
T ss_pred HhhHHHHHHHHHHHHHHHhc--------cch--hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhh
Confidence 88888888888888887732 222 22223333334444566677888888899999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 009250 478 FLVGLFFLDLVET 490 (539)
Q Consensus 478 ~~~~~~~~~l~~~ 490 (539)
.++|.+.+.++..
T Consensus 380 ~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 380 VVSPALYGNIFAL 392 (463)
T ss_pred hhhHHHHHHHHHH
Confidence 9999999988654
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=1.6e-13 Score=134.04 Aligned_cols=155 Identities=17% Similarity=0.134 Sum_probs=129.9
Q ss_pred hhHH-HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009250 108 GPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (539)
Q Consensus 108 ~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (539)
...| .+++++|. ++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......++++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3455 45567888 77788988888888888899999999999999998888777666666556667888888889999
Q ss_pred hhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccccc
Q 009250 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (539)
Q Consensus 187 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (539)
.+++.+...+....+..|.+|+ +|++++++++....+|..+++.+++.+.+..+ |+..|++.+++.++.++..++.+|
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9998888888888888999986 49999999999999999999999999988877 999999988888887777776654
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.54 E-value=7.9e-14 Score=143.06 Aligned_cols=140 Identities=14% Similarity=-0.025 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 206 (539)
.+...+..++..++.++.|+++||+|||++++++.++.++++++.+++++...+++++++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677888999999999999999999999999999999999999999888999999999998889999999999999
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccch
Q 009250 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
|.++|++++|+.++...+|.+++|++++.+... + ...+|++.+++.++.+++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~-~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T-KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999877653 2 56788888888777777777788763
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=4.9e-14 Score=139.16 Aligned_cols=145 Identities=14% Similarity=0.044 Sum_probs=127.2
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHH
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~ 201 (539)
+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred HHhcCCCCccccchhh-hHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc-cccc
Q 009250 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF-TVES 267 (539)
Q Consensus 202 i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~ 267 (539)
+.|.+|++.|+...+. ++....+|.++++.+.+++.+..| |+..|++.+++.++..++.++ .+++
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999887765 677888999999999999999888 999999988877766554444 3443
No 126
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=2.1e-14 Score=140.84 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=130.5
Q ss_pred hhHHHHHHHhCCCC------CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh----cH
Q 009250 108 GPIVSIAKELGFEG------NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH----SL 177 (539)
Q Consensus 108 ~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~----~~ 177 (539)
...+...++.|.+. +....+...++..++..++.++.|+++||+|+|+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455566666421 225568999999999999999999999999999999999999998877776642 24
Q ss_pred HHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCcc-----hhHHHHHhhH
Q 009250 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-----WWRTMLYIAS 251 (539)
Q Consensus 178 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~-----~wr~~f~~~~ 251 (539)
+.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|..+||++++.+.+..+ +|+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999889999999999999999999999997 6789999999999999887632 2999999988
Q ss_pred HHHHHHHHHhcc-cccc
Q 009250 252 LPGFILALGMQF-TVES 267 (539)
Q Consensus 252 ~~~~~~~~~~~~-~~~~ 267 (539)
++.++..++.++ ++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 887777665544 5544
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.52 E-value=1.7e-13 Score=134.94 Aligned_cols=158 Identities=21% Similarity=0.142 Sum_probs=135.1
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHh
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 187 (539)
...|.+.++.|. +..+.+++.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.
T Consensus 241 ~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 241 NWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 346777788888 778889999999999999999999999999999999988887777777777888888888888999
Q ss_pred hhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccc
Q 009250 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (539)
Q Consensus 188 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (539)
|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..++|...+++.+...++..++.+++.++
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99888888999999999999999999999999999999999999999998876557778877776666666555554443
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=7.2e-14 Score=136.17 Aligned_cols=148 Identities=18% Similarity=0.065 Sum_probs=128.2
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcH--HHHHHHHH
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRF 185 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~ 185 (539)
...+.+.++++. ++.+.+++.+.+.++..++.++.|++.||+|||+.+..+.++.+++.++..+.++. ..+++..+
T Consensus 226 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 226 GLYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 345556778887 77788999999999999999999999999999999999999999998888877643 33456678
Q ss_pred HhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHH
Q 009250 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (539)
Q Consensus 186 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 258 (539)
+.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |++.|++.+++.++..
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 88988888888888899999999999999999999999999999999999988888 9999999887776653
No 129
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=3.3e-13 Score=130.13 Aligned_cols=168 Identities=26% Similarity=0.348 Sum_probs=148.5
Q ss_pred HHHhhhhhcccccchhHHHHHHHh-CCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchH-HHHHHHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIVSIAKEL-GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR-TFQIDTIPLILGAIIS 171 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~ 171 (539)
+..+.............|.+.++. |. ++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 182 LAFFLLSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 334444455555556667666665 77 8888999999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009250 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (539)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 251 (539)
.+.++.+.+++..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |++.|++.+
T Consensus 260 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~ 338 (352)
T cd06174 260 ALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILA 338 (352)
T ss_pred HHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777 999999999
Q ss_pred HHHHHHHHHhccc
Q 009250 252 LPGFILALGMQFT 264 (539)
Q Consensus 252 ~~~~~~~~~~~~~ 264 (539)
++.++..+..+++
T Consensus 339 ~~~~i~~i~~~~~ 351 (352)
T cd06174 339 ALALLAALLLLLL 351 (352)
T ss_pred HHHHHHHHHheec
Confidence 9988877765543
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.49 E-value=3.4e-13 Score=132.40 Aligned_cols=156 Identities=17% Similarity=0.112 Sum_probs=133.1
Q ss_pred chhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009250 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (539)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (539)
...++.+.++.|. +. .++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++
T Consensus 236 ~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 236 ATFITLYYAARGW--DG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHccc--cc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3445555555565 33 3667788889999999999999999999999999999999998888888898888899999
Q ss_pred hhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccccc
Q 009250 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (539)
Q Consensus 187 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (539)
.|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..+ |++.|++.++..++..+..+++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999898888888999999999999999999999999999999998888777 999999988888877766666555
Q ss_pred c
Q 009250 267 S 267 (539)
Q Consensus 267 ~ 267 (539)
+
T Consensus 391 ~ 391 (399)
T PRK05122 391 R 391 (399)
T ss_pred c
Confidence 4
No 131
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=4.4e-13 Score=131.21 Aligned_cols=153 Identities=12% Similarity=0.080 Sum_probs=131.6
Q ss_pred cchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHH
Q 009250 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (539)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 185 (539)
.....+.+.++.+. +. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGW--AM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCC--ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 33444555566665 43 366677788888999999999999999999999999999999888888899888888999
Q ss_pred HhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc
Q 009250 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (539)
Q Consensus 186 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (539)
+.|++.+...+...+.+.|.+|+++|+++.++++....+|..+++.+.+.+.+..+ |+..|++.++..++..+..++
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHh
Confidence 99999998889888899999999999999999999999999999999999998888 999999988887777665543
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.46 E-value=6.9e-13 Score=129.07 Aligned_cols=162 Identities=12% Similarity=-0.013 Sum_probs=138.4
Q ss_pred HHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh
Q 009250 95 SNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (539)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (539)
..++.......+....|.+.+|+|. ++.+.|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++.+++
T Consensus 213 ~~~l~~~~~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 213 AVCLIQGAHAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 3344344444455566766678888 88889999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHH
Q 009250 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLP 253 (539)
Q Consensus 175 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 253 (539)
++.+.+++.+++.|++.+...+....++.+. |+++|++..++++ ...++|..+++.++|++.++.+ + ..|++.+.+
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~ 367 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAII 367 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHH
Confidence 9999999999999999999999999999998 9989999999986 5788999999999999999887 6 567777777
Q ss_pred HHHHHHHh
Q 009250 254 GFILALGM 261 (539)
Q Consensus 254 ~~~~~~~~ 261 (539)
+++..++.
T Consensus 368 ~~~~~~~~ 375 (382)
T TIGR00902 368 AAAAFFLI 375 (382)
T ss_pred HHHHHHHH
Confidence 66655443
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=5.6e-13 Score=131.43 Aligned_cols=158 Identities=16% Similarity=0.144 Sum_probs=132.8
Q ss_pred ccchhHHHHHHHhCCCCCc--hhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHH
Q 009250 105 VMNGPIVSIAKELGFEGNP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (539)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 182 (539)
...+..+.+..+.+.+.+. ...+++.+++.++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3445556555554331121 23466777788888899999999999999999999999988888888888888999999
Q ss_pred HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhc
Q 009250 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (539)
Q Consensus 183 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 262 (539)
.+++.|++.+...+...+++.+..++++||+.+++.+....+|..+||.+++.+.+..+ |++.|++.+++.++..+..+
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888 99999999988887776655
Q ss_pred c
Q 009250 263 F 263 (539)
Q Consensus 263 ~ 263 (539)
+
T Consensus 396 ~ 396 (408)
T PRK09874 396 N 396 (408)
T ss_pred H
Confidence 4
No 134
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=5.2e-13 Score=132.67 Aligned_cols=163 Identities=15% Similarity=0.090 Sum_probs=131.9
Q ss_pred HHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh--cchHHHH--HHHHHHHHHHHH
Q 009250 95 SNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTFQ--IDTIPLILGAII 170 (539)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~--~~~~~~~~~~~~ 170 (539)
..++..+........+|.+.+++|. +..+.+++.++..++..+++++.|+++||. ++|+... .+.++.+++.++
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444566777788888 888889999999999999999999999983 3443333 344444566666
Q ss_pred HHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009250 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (539)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 250 (539)
+.++++++.+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|..+||.+++.+.+..++|++.|++.
T Consensus 327 ~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 327 CALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred HHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 77788999999999999999999999999999999999999999999999999999999999999988765599999998
Q ss_pred HHHHHHHHH
Q 009250 251 SLPGFILAL 259 (539)
Q Consensus 251 ~~~~~~~~~ 259 (539)
+++.++..+
T Consensus 407 ~~~~li~~~ 415 (455)
T TIGR00892 407 GSIVVSAGL 415 (455)
T ss_pred hHHHHHHHH
Confidence 887666544
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.45 E-value=1.4e-12 Score=126.92 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=128.4
Q ss_pred HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhch
Q 009250 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (539)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 191 (539)
.+.+++|. ++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..++..+.++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577888 7778888888887777888999999999999999998888877777666677788888888999999999
Q ss_pred hhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccc
Q 009250 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTV 265 (539)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 265 (539)
+...+....++.|..|++ +++++++++....+|..+++.+++.+.+..+ |+..|++.++..++..+...+++
T Consensus 303 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheec
Confidence 988888889999998765 6799999999999999999999999988877 99999999888887777665554
No 136
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.41 E-value=1.4e-11 Score=115.57 Aligned_cols=368 Identities=13% Similarity=0.081 Sum_probs=214.5
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHH-hCCCCCchhh-HHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILE-GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 166 (539)
...+|+-.|+..+-- .-....|.+.+. .|+ ++.|+ .-+.-+..-.+....++...+.|..+.|++++++.+...+
T Consensus 7 ~~llc~~gf~~~frP-sEPfl~~yL~~~~kn~--T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 7 TLLLCLFGFFKEFRP-SEPFLTPYLTGPDKNF--TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHHHhcCC-CCccchHHHcCCccCC--CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 444444444433322 112233445443 566 55544 3566777788889999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc-hhHH
Q 009250 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRT 245 (539)
Q Consensus 167 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~wr~ 245 (539)
..++..+.++...+-+..++-|++.+ ...+-.+++-...++++-.++.+...++..+|..++.++|..+....+ ..+.
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~ 162 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ 162 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999987 577888899889999988999999999999999999988887665322 2777
Q ss_pred HHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHH--HHHHHHhcCCCCc-------chhh
Q 009250 246 MLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEE--FQLVIKKDGSDLD-------SQWS 316 (539)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~~ 316 (539)
..++......++.+..+++|..++-..-+++..+... .......+..+...+. ..+.........+ ..++
T Consensus 163 L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 241 (412)
T PF01770_consen 163 LNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFK 241 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHH
Confidence 7777777666777777777775542211111111000 0000000000000000 0000000000011 1122
Q ss_pred hhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcC--CChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC
Q 009250 317 ELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG--ITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG 394 (539)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g 394 (539)
+..+++. ++...+++....+++.....|...+.++.. .......+.+-++..+.+.++ .+..|++..++.
T Consensus 242 ~~y~~~~----ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~----al~~g~v~~~w~ 313 (412)
T PF01770_consen 242 SCYSNPR----LLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIA----ALLAGYVKVNWD 313 (412)
T ss_pred HHhcCch----HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHH----HHHHhHhhcchH
Confidence 2333333 333445555555677777888888887771 223346666767777776555 888888855555
Q ss_pred CchhhHhhHHHH--HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHH
Q 009250 395 RQKLLIGSYLGM--AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSV 472 (539)
Q Consensus 395 ~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 472 (539)
+..-+.++.... +..++++... .+.+......+++...+.. ..++....++.....+.-|..+|++.++
T Consensus 314 ~~~~l~l~~~S~l~a~~L~lm~~t--------~~Iwv~Y~~yIif~~~y~f-liTiA~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 314 RWGELALGVFSLLQAGLLFLMSFT--------GNIWVCYAGYIIFRSLYMF-LITIASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccccceeeeeeeHHHH
Confidence 544333333322 2223333221 1222233333333333322 2233334444555566678888887776
Q ss_pred HHHHHH
Q 009250 473 HWVCNF 478 (539)
Q Consensus 473 ~~~g~~ 478 (539)
..+-..
T Consensus 385 Al~LQt 390 (412)
T PF01770_consen 385 ALVLQT 390 (412)
T ss_pred HHHHHH
Confidence 554443
No 137
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.40 E-value=1.1e-11 Score=112.84 Aligned_cols=246 Identities=14% Similarity=0.075 Sum_probs=153.4
Q ss_pred cccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHH
Q 009250 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (539)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 183 (539)
.+.+|..-.+-+++|. +..|++.+....+...++..++.|.++||+|||+.-+..+++.+++++. -..++++.++++
T Consensus 51 WLQGpY~Y~LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~G 127 (354)
T PF05631_consen 51 WLQGPYLYALYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLG 127 (354)
T ss_pred HhhcchhHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHH
Confidence 4455666566678999 8999999999999999999999999999999999999999999999974 456899999999
Q ss_pred HHHhhhchhhhhhhHHHHH-HhcCCCC----ccccchhhhH-HHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHH
Q 009250 184 RFLVGLGIGVNTVLVPIYI-SEVAPTK----YRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFI 256 (539)
Q Consensus 184 r~l~G~~~~~~~~~~~~~i-~~~~~~~----~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~ 256 (539)
|++.|++.+..+.+--++. .|.-..+ ..+..++... ...++-.+++.+++.++.+..+ +-..+|....+..++
T Consensus 128 RvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 128 RVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 9999999999999988875 4442211 1122222222 2233334555555555554433 136788887777777
Q ss_pred HHHHhcc-cccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHH
Q 009250 257 LALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFL 335 (539)
Q Consensus 257 ~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (539)
..+++.. .+|... +.. +..+. .++.+..++.++++++ .+.+.....
T Consensus 208 ~~~~I~~~W~ENyg------~~~-------------~~~~~-----------~~~~~~a~~~i~~d~r---il~LG~~qs 254 (354)
T PF05631_consen 208 AAVLILKTWPENYG------DTS-------------SSSSL-----------SGSFREAWRAILSDPR---ILLLGLIQS 254 (354)
T ss_pred HHHHHHhcccccCC------Ccc-------------cccch-----------HHHHHHHHHHHHcCch---hHHHHHHHH
Confidence 6665543 455421 000 00000 0001123344444443 445555666
Q ss_pred HhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh
Q 009250 336 LQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK 392 (539)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr 392 (539)
+.....+.....|.|.+- ..+.....+++++......++| +.+..++..+
T Consensus 255 lFE~smy~FVflWtPaL~---~~~~~~P~GlIFssFM~a~MlG----S~lf~~l~s~ 304 (354)
T PF05631_consen 255 LFEGSMYLFVFLWTPALD---PDDEELPLGLIFSSFMVAMMLG----SSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHheeeeeceec---CCCCCCCchHHHHHHHHHHHHH----HHHHHHHHhC
Confidence 666666666666667665 2222223455555555554444 6666554443
No 138
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.40 E-value=2.4e-12 Score=125.95 Aligned_cols=357 Identities=15% Similarity=0.103 Sum_probs=196.7
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhc-----chHHHHHHHHHHHHHHHHHHhh----hcHH
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQIDTIPLILGAIISAQA----HSLD 178 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~a----~~~~ 178 (539)
+..+.+.+++|+ ++.+...+.+...+...+ .+++|.++|.+- ||+-++++.++..++.+..+.. .+..
T Consensus 11 ~~~~~l~~~l~l--s~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGL--SPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 456788999999 888888777777776554 788999999763 5555566777776666655553 3566
Q ss_pred HHHHHHHHhhhchhhhhhhHHHHHHhcCCC--CccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHH
Q 009250 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPT--KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (539)
Q Consensus 179 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 256 (539)
...++-++..+|.+....++.+++.|...+ ++||...+.......+|.+++..++|.+.+..+ +|..|.+.+++.++
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLL 166 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHH
Confidence 677778889999999999999999999843 336778888888999999999999999998888 99999998887777
Q ss_pred HHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHH-HHHHHH
Q 009250 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI-GGALFL 335 (539)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 335 (539)
..+..+++.|+.+ +...++... ..++ ..+..... .++.....++.++.+..+...+ ..++..
T Consensus 167 ~~~~~~~~~~e~~----~~~~~~~~~----~~~~-~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 229 (433)
T PF03092_consen 167 MLIVALFLLEERK----VRPADEVFS----FGKE-EVPCLFGS--------FREQLSELWRALQQRAIWQPILFFIFFFN 229 (433)
T ss_pred HHHHHHHhhhhcc----ccccchhhc----cccc-ccchhhHH--------HHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 7665555544310 000000000 0000 00000000 0000112333344443333222 111111
Q ss_pred HhhhhhhHH-HHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHH
Q 009250 336 LQQFAGING-VLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVV 414 (539)
Q Consensus 336 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 414 (539)
..... ... ..++........+++.. ..+.+..+..+..++| ..+......+..-|+++....++..+..+.-.
T Consensus 230 ~~~~~-~~a~~fy~~~~~~~gp~fs~~-f~~~~~~vg~~~~l~g----~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~ 303 (433)
T PF03092_consen 230 LPPSI-SSASSFYFQTDALGGPHFSPS-FYGTLSIVGSIASLLG----ILLYRKYFSNWSWRRIFVVTTLVSVLASLFDL 303 (433)
T ss_pred hccCC-CCccEEEEEeccccccccCHH-HHHHHHHHHHHHHHHH----HHHHHHHHhCCCHHHHHHHHHHHHHHHhcccE
Confidence 11110 011 11111111111113332 3333333333332111 44444444444555555544443333222111
Q ss_pred HHh-cCCCCcc-chhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009250 415 GAT-SLPLDED-FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 492 (539)
Q Consensus 415 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g 492 (539)
... .....-. ...+..+.-..+.-........|. ..+.+|+.|+..-|+.+|+..++.++|..++..+...+.+..|
T Consensus 304 ~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~-lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 304 LLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPS-LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHH-HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 100 0000000 011111111222222222223343 3567899999999999999999999999999999998887766
No 139
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=1e-11 Score=121.28 Aligned_cols=162 Identities=12% Similarity=0.063 Sum_probs=110.0
Q ss_pred hhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcC
Q 009250 341 GINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSL 419 (539)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 419 (539)
+......+.+.++ ++.+.+.. ..+...++..+.+.++ .++.|+++||+|||+.+..+.+...++.+.+.+..
T Consensus 22 g~~~~~~~l~~~l~~~~g~s~~-~~g~~~s~~~~~~~~~----~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~-- 94 (395)
T PRK10054 22 GRGATLPFMTIYLSRQYSLSVD-LIGYAMTIALTIGVVF----SLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN-- 94 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh--
Confidence 3444444555555 45676654 5666666555555333 89999999999999999888887777776665521
Q ss_pred CCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHH
Q 009250 420 PLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 499 (539)
+...................+....+..|..|+++|+++.|+.+...++|.+++|.+.+.+.+ .||+..|.+
T Consensus 95 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 95 -------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 121222211121111122345566778899999999999999999999999999999998875 789999988
Q ss_pred HHHHHHHHHHhhheeeeC
Q 009250 500 FGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~ 517 (539)
.+++.++..++..+..++
T Consensus 167 ~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 877777665554444443
No 140
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.38 E-value=6e-12 Score=125.93 Aligned_cols=172 Identities=17% Similarity=0.081 Sum_probs=125.5
Q ss_pred HHHHHHHHhhhhhcccccchhHHH-HHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
++.+++..++............|. +.+++|+ +..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 344444444444443334455664 4567888 8888899999999999999999999999999998877655544443
Q ss_pred HHH--HHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHH-HHHHHHHhcCCCCC------
Q 009250 168 AII--SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAED------ 238 (539)
Q Consensus 168 ~~~--~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~~~~~l~~------ 238 (539)
..+ ....++...+.+.+++.|++.............|.+|+++||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 322 233456767778888888654444434446677999999999999999988886 77899999888888
Q ss_pred ------CcchhHHHHHhhHHHHHHHHHHhcc
Q 009250 239 ------DPHWWRTMLYIASLPGFILALGMQF 263 (539)
Q Consensus 239 ------~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (539)
..+ |+..|++.++..++..+..++
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHHH
Confidence 456 999999887777776555543
No 141
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=5.6e-12 Score=123.79 Aligned_cols=169 Identities=21% Similarity=0.156 Sum_probs=120.4
Q ss_pred HHHHHHHhhhhhcccccchhHHHH-HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchH--HHH------HH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR--TFQ------ID 160 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~------~~ 160 (539)
....+..++............|.+ .+++|. ++.+.+++.+...++..++.++.|+++||+|||+ ... .+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGL--SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc--cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 333444444444444555556654 456787 7888899999999999999999999999999996 111 11
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc
Q 009250 161 TIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (539)
Q Consensus 161 ~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 240 (539)
.++..+........++.+..+...++.+.+.+ ..+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 11111112222222344444444555555555 78999999999999999999999999999999999999999998876
Q ss_pred chhHHHHHhhHHHHHHHHHHh
Q 009250 241 HWWRTMLYIASLPGFILALGM 261 (539)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~ 261 (539)
+.|+..|++.++..++..+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 659999988888777665544
No 142
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=2.7e-12 Score=125.95 Aligned_cols=158 Identities=17% Similarity=0.144 Sum_probs=120.8
Q ss_pred HhhhhhcccccchhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH--HHHH
Q 009250 96 NFLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA--IISA 172 (539)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~ 172 (539)
.++............|.+. +++|. ++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. +...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444445566555 66787 77788999999999999999999999999999998876555544433 2222
Q ss_pred h--hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhh-HHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 173 Q--AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 173 ~--a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +.+..+|..++|.+++.+.++.+.|++.++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 2 256777778889999999999999999999999999999999984 5667789999999999998876658877776
Q ss_pred hHHHHH
Q 009250 250 ASLPGF 255 (539)
Q Consensus 250 ~~~~~~ 255 (539)
.++..+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 665444
No 143
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=7.6e-12 Score=122.40 Aligned_cols=166 Identities=11% Similarity=0.019 Sum_probs=134.4
Q ss_pred hhhhhcccccchhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh
Q 009250 97 FLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (539)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 175 (539)
++.......+....|.+. +++|+ +..+.+++.+.+.++..++.++.|+++||+|||+++.....+..+...+....+
T Consensus 215 ~~~~~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 215 LLYILAQLTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 333333333444566555 66788 888889999999999999999999999999999999988888777777777778
Q ss_pred cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009250 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (539)
Q Consensus 176 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (539)
+.+.+.+..++.|++.+..++...++..|..++ +++...+.......+|..++|.+.+++.+..+ |+..+++.++..+
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~ 370 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYA 370 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHH
Confidence 887888888999998888888888888887764 46778888888899999999999999998888 9999998888877
Q ss_pred HHHHHhccccc
Q 009250 256 ILALGMQFTVE 266 (539)
Q Consensus 256 ~~~~~~~~~~~ 266 (539)
+..+.....++
T Consensus 371 ~~~~~~~~~~~ 381 (394)
T PRK03699 371 VVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHH
Confidence 77665555543
No 144
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.35 E-value=1.4e-11 Score=121.00 Aligned_cols=179 Identities=12% Similarity=0.034 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHH
Q 009250 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLG 405 (539)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 405 (539)
...+...+.+...+.......+..|.+.++.+.+.. ..+...+...+...++ .+..|++.||+|||+.+..+.++
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~-~~g~~~s~~~~~~~~~----~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSAT-MFGLAATLFYAAYVIC----GIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHH-HHHHHHHHHHHHHHHH----HhhHHHHHHHhChHHHHHHHHHH
Confidence 334444444444444455566667777777777654 5556666555555444 89999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 406 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
..++.++..+.. +...+.. .-+..+.+.+ ..+....++.|.+|+++|+++.|+.+....+|..+++.+.
T Consensus 83 ~~~~~~~~~~~~---------~~~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 83 WGIASTATMFAT---------GPESLYL-LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHHHHHHHhc---------CHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887776622 1222222 2222233322 3455567789999999999999999999999999999999
Q ss_pred HHHHH------HhCcchhhHHHHHHHHHHHHhhheeeeCCC
Q 009250 485 LDLVE------TFGVAPVYAGFGGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 485 ~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (539)
+.+.+ ..||+..|.+.++..++..++.+++++|++
T Consensus 153 ~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 153 GYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 98875 358999999888777776666666777765
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.35 E-value=3.5e-12 Score=129.09 Aligned_cols=147 Identities=20% Similarity=0.091 Sum_probs=116.1
Q ss_pred cchhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh--hcHHHHHH
Q 009250 106 MNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLW 182 (539)
Q Consensus 106 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~ 182 (539)
....+|.+. +++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.++.... .+.+.+.+
T Consensus 294 ~~~~lp~~l~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 294 IQALLPTYLKTDLGY--DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 345567666 58888 88889999999999999999999999999999999998887777666544433 33444445
Q ss_pred HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009250 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (539)
Q Consensus 183 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (539)
..++.|.......+....++.|.+|+++|++++++......+|..+||.+++.+.+..+ |+..+...+....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~ 443 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLT 443 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHH
Confidence 55555544444556677889999999999999999999999999999999999999888 9888766554433
No 146
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=8.7e-12 Score=121.44 Aligned_cols=151 Identities=14% Similarity=0.156 Sum_probs=125.3
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHh
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 187 (539)
..+|.+.++.|. +..+.+++.+.+.++..+++++.|++.||+|+|+++..+..+..++.+... + ........++.
T Consensus 221 ~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 346777777777 777889999999999999999999999999999999988888877665543 2 23445677888
Q ss_pred hhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 188 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
|++.....|...+.+.|..|+++++.+.+.+....++|..+||.+++++.++.+ |++.|++.+...++..+..+..
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHhc
Confidence 888888899999999999998888888888888999999999999999998888 9999999888777665554443
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.34 E-value=1.2e-11 Score=122.61 Aligned_cols=161 Identities=16% Similarity=0.142 Sum_probs=115.4
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
......+.|.+.++.+.+.. ..+.+.....+...++ .++.|++.||+|||+.+.++.++..++.++.....
T Consensus 39 ~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 109 (434)
T PRK11663 39 RKSFNAAMPEMLADLGLSRS-DIGLLATLFYITYGVS----KFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS---- 109 (434)
T ss_pred hhhHHHhhHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh----
Confidence 33456677888888887754 5555555555555444 99999999999999999999888888877665521
Q ss_pred CccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGF 500 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~ 500 (539)
....+....+..+...+ ..+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..|.+.
T Consensus 110 ------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~ 183 (434)
T PRK11663 110 ------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIA 183 (434)
T ss_pred ------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 12222222222222222 23556678889999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhheeeeC
Q 009250 501 GGVSLLSALFAYYFIVE 517 (539)
Q Consensus 501 ~~~~~~~~~~~~~~~~~ 517 (539)
+++.++..++..+.++|
T Consensus 184 ~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 184 GIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 77666554444444444
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=9.2e-12 Score=122.66 Aligned_cols=136 Identities=21% Similarity=0.178 Sum_probs=113.5
Q ss_pred HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH-HHHhhhcHHHHHHHHHHhhhc
Q 009250 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI-ISAQAHSLDEMLWGRFLVGLG 190 (539)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~a~~~~~l~~~r~l~G~~ 190 (539)
.+.+++|. +..+.+++.+.+.++..++.++.|++.||+|||+.+..+.++.++..+ .....++.+.+.+..++.|++
T Consensus 264 ~~~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (405)
T TIGR00891 264 YLKADLGL--SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQML 341 (405)
T ss_pred HHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 44567788 888889999999999999999999999999999999888776644333 334456677777777888887
Q ss_pred hhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009250 191 IGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (539)
Q Consensus 191 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 249 (539)
.+...+...+++.|.+|+++|++++|+.+....+|..++|++++.+.+..+.|+..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 342 VQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77778888899999999999999999999999999999999999999877657666654
No 149
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=8.1e-12 Score=115.08 Aligned_cols=163 Identities=15% Similarity=0.106 Sum_probs=127.7
Q ss_pred hhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCC
Q 009250 341 GINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 420 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 420 (539)
.-..+..-.|.+.++.+.+.. +.+.+.+...+.-.++ .++.|.++||.+.|..+..++++.++..+++++
T Consensus 44 ~RknF~~a~p~l~e~~~lsk~-~lG~i~s~f~i~YG~s----Kf~~G~~sDr~npr~fm~~gLilsai~nil~Gf----- 113 (448)
T COG2271 44 TRKNFNLAMPALIEDGGLSKT-QLGILGSAFSITYGVS----KFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF----- 113 (448)
T ss_pred HHHhHhhccHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHhhhhcccCCCceeehHHHHHHHHHHHHHhh-----
Confidence 344556667888888877655 5555555444444333 999999999999999999999999999999988
Q ss_pred CCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH--HHHHHHhCcchhh
Q 009250 421 LDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF--LDLVETFGVAPVY 497 (539)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~--~~l~~~~g~~~~~ 497 (539)
.....+..++...-++.-+. .|.+...+..-+|+++||+..++.|+..++|+++.|.+. +.+.++.+|+..|
T Consensus 114 -----s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f 188 (448)
T COG2271 114 -----SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAF 188 (448)
T ss_pred -----hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHH
Confidence 33445555555554544444 466677788999999999999999999999999999999 8888888999999
Q ss_pred HHHHHHHHHHHHhhheeeeCC
Q 009250 498 AGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~ 518 (539)
++-++++++..++.++..+++
T Consensus 189 ~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 189 YFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 999999999888877776554
No 150
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=8.5e-12 Score=123.17 Aligned_cols=158 Identities=15% Similarity=0.047 Sum_probs=134.5
Q ss_pred chhHHHHHHH-hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHH
Q 009250 107 NGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (539)
Q Consensus 107 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 185 (539)
....|.+.++ +|. ++.+.|++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3455666666 888 7788899999999999999999999999988888888888888888888888898888888999
Q ss_pred HhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH-hccc
Q 009250 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG-MQFT 264 (539)
Q Consensus 186 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~ 264 (539)
+.|++.+...+...+++.|..|+++||++++++.....+|..+|+.+.+.+.+..+ ++..+++.+...++..++ ....
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988888888999999999999999999999999999999999999998877 888888777665555443 3445
Q ss_pred ccc
Q 009250 265 VES 267 (539)
Q Consensus 265 ~~~ 267 (539)
++.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 554
No 151
>PRK03545 putative arabinose transporter; Provisional
Probab=99.33 E-value=2.2e-11 Score=119.00 Aligned_cols=150 Identities=13% Similarity=0.115 Sum_probs=122.6
Q ss_pred HHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH-HHHhhhcHHHHHHHHHHhh
Q 009250 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI-ISAQAHSLDEMLWGRFLVG 188 (539)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~a~~~~~l~~~r~l~G 188 (539)
.|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+++ .+..+..++.. +....++.+.++++.++.|
T Consensus 229 ~~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGL--SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCC--CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3445566787 777889999999999999999999999999988754 44444444443 3455678888888999999
Q ss_pred hchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
++.+...+...+.+.+..| ++|++++++++....+|..+|+++++.+.++.+ ++..|++.+++.++..+...+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHH
Confidence 9988777878888888876 578999999999999999999999999999998 9999999998888776665443
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.33 E-value=1.6e-11 Score=120.71 Aligned_cols=163 Identities=21% Similarity=0.250 Sum_probs=117.1
Q ss_pred hhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCC
Q 009250 341 GINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 420 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 420 (539)
......++.|.+.++.+.+.. ..+.+.....+...++ .++.|+++||+|||+.+..+.++..++.+++...
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---- 102 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGLDPV-QLGFLFSAGLIGMAFG----ALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA---- 102 (398)
T ss_pred HHHHHHhhHHHHhhccCCCHH-HHHHHHHHHHHHHHHH----HHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc----
Confidence 345566677888888777654 4455555554444333 8999999999999999998888877777666542
Q ss_pred CCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHH
Q 009250 421 LDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 499 (539)
. .........+..+++.+ ..+...+++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..||+..+.+
T Consensus 103 -----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 176 (398)
T TIGR00895 103 -----T-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYV 176 (398)
T ss_pred -----c-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhh
Confidence 1 12222222233333333 3466678889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHhhheeeeCC
Q 009250 500 FGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~ 518 (539)
.+++.++..++.+.+.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 177 GGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hhhHHHHHHHHHHHhCCCC
Confidence 7666666655555556654
No 153
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.32 E-value=2.8e-11 Score=118.74 Aligned_cols=163 Identities=15% Similarity=0.076 Sum_probs=124.2
Q ss_pred hhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHH-HHHHHHHHHHHHHHh--
Q 009250 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ-IDTIPLILGAIISAQ-- 173 (539)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-- 173 (539)
++............|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+.+. .+.+..+++.+...+
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~ 309 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIP 309 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444566777788888 7777889999999999999999999999999988764 333444444333332
Q ss_pred ---hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009250 174 ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (539)
Q Consensus 174 ---a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 250 (539)
.++.+.+++..++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+.+..+ |+..|++.
T Consensus 310 ~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~ 386 (402)
T TIGR00897 310 QHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIF 386 (402)
T ss_pred HccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHH
Confidence 24677777889999998887655 3456677655 579999999999999999999999999999888 99999998
Q ss_pred HHHHHHHHHHhccc
Q 009250 251 SLPGFILALGMQFT 264 (539)
Q Consensus 251 ~~~~~~~~~~~~~~ 264 (539)
++..++..++..|+
T Consensus 387 a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 387 AALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHh
Confidence 88877776665553
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=2.1e-11 Score=118.72 Aligned_cols=150 Identities=13% Similarity=0.018 Sum_probs=125.0
Q ss_pred cchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHH
Q 009250 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (539)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 185 (539)
.....|.+.+|.|. ++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 33444556677888 7788899999999999999999999999999999999999999998888889999999999999
Q ss_pred HhhhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009250 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (539)
Q Consensus 186 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (539)
+.|++.+...+....++.+. +++++++..++++ ....+|..+|+.++|.+.+..+ + ..|+..+++.++.+++
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 99999999999999998887 5556788888875 5567888999999999999887 6 4666666665554443
No 155
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3.9e-11 Score=112.14 Aligned_cols=161 Identities=18% Similarity=0.179 Sum_probs=129.3
Q ss_pred hhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCC
Q 009250 341 GINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 420 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 420 (539)
.-....-.+|.+.++.+.+.+ .++..+++..+...++ .++...+.||+.||++++..+.+..++.++..+.+
T Consensus 28 tEfv~~gLLp~iA~dl~vs~~-~aG~lis~yAl~~ai~----ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--- 99 (394)
T COG2814 28 TEFVPVGLLPPIAADLGVSEG-AAGQLITAYALGVALG----APLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--- 99 (394)
T ss_pred HHHHHHhchHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc---
Confidence 344566678889999998876 5566556555555444 99999999999999999999999999999888843
Q ss_pred CCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHH
Q 009250 421 LDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 499 (539)
+...+...=+..+...+ ++++..+...++.|+++|+++.++......+...+|.++..++-|.+||+.+|++
T Consensus 100 -------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ 172 (394)
T COG2814 100 -------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLA 172 (394)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHH
Confidence 22333333333333322 3566778889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhheeee
Q 009250 500 FGGVSLLSALFAYYFIV 516 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~ 516 (539)
.+++.++..+..+..+|
T Consensus 173 ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 173 IAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 99999999998888888
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.31 E-value=2.4e-11 Score=118.79 Aligned_cols=164 Identities=14% Similarity=0.145 Sum_probs=118.0
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
........|.+.++.+.+.. ..+...+...+...++ .++.|++.||+|||+.+..+.++..++.+......
T Consensus 21 ~~~~~~~~p~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---- 91 (385)
T TIGR00710 21 IDMYLPAFPEIAADLSTPAS-IVQMTLTLYLLGFAAG----QLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN---- 91 (385)
T ss_pred HHHhcccHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc----
Confidence 33444456777788887655 5555555555554333 99999999999999999998888887777765521
Q ss_pred CccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGF 500 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~ 500 (539)
.........+..+.+.+ ..+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..+++.
T Consensus 92 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 92 ------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred ------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 22222222233333332 23556678889999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhheeeeCCCC
Q 009250 501 GGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~ 520 (539)
+++.++..++.++..||+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 166 SLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCC
Confidence 87777776666555665543
No 157
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.31 E-value=4.7e-11 Score=120.39 Aligned_cols=159 Identities=16% Similarity=0.044 Sum_probs=117.0
Q ss_pred cchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh--cH-H-HHH
Q 009250 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SL-D-EML 181 (539)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~-~-~l~ 181 (539)
.....|.+.+++|. +....++......+...++.++.|+++||+|||++++.+.++.+++.++.+... +. + ...
T Consensus 290 ~~~~~p~i~~~~g~--~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGA--STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 33455888888888 555556777778888899999999999999999999999999999888776432 21 1 222
Q ss_pred HHHHHhhhchhh-hhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcC------CCCCCcchhHHHHHhhHHHH
Q 009250 182 WGRFLVGLGIGV-NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI------PAEDDPHWWRTMLYIASLPG 254 (539)
Q Consensus 182 ~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------~l~~~~~~wr~~f~~~~~~~ 254 (539)
.+-++.+.+.+. ..+....++.|.+|+++|+.++++......+|.++++.+.+ ++.+..+ |++.|++.++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 446 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHH
Confidence 334444444443 23677899999999999999999999999888888754443 4445566 888999888877
Q ss_pred HHHHHHhcc-cccc
Q 009250 255 FILALGMQF-TVES 267 (539)
Q Consensus 255 ~~~~~~~~~-~~~~ 267 (539)
++.+++.++ .||+
T Consensus 447 ~~~~~~~~~~~~e~ 460 (479)
T PRK10077 447 VLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHhccccC
Confidence 777665554 5554
No 158
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.31 E-value=2.7e-11 Score=118.31 Aligned_cols=164 Identities=12% Similarity=0.052 Sum_probs=127.0
Q ss_pred hcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh-cHHH
Q 009250 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH-SLDE 179 (539)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~ 179 (539)
..........|.+.+++|. +..+.|++.+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...
T Consensus 219 ~~~~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3333444456666677888 788889999999999999999999999999999999998888877776655333 3222
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCC-CCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHH
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 258 (539)
+ .-++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..|+|...|++.++..++..
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 2 2346688888888887777777775 577999999999999999999999999999887668888888877777665
Q ss_pred HHh-cccccch
Q 009250 259 LGM-QFTVESP 268 (539)
Q Consensus 259 ~~~-~~~~~~p 268 (539)
+.. .+.||++
T Consensus 375 ~~~~~~~~~~~ 385 (393)
T PRK09705 375 IITLRFAPARF 385 (393)
T ss_pred HHHHHhccccc
Confidence 554 4455553
No 159
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.30 E-value=1.5e-11 Score=124.13 Aligned_cols=178 Identities=13% Similarity=-0.004 Sum_probs=133.2
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 166 (539)
..+....+..+.............|.+.+++|. +..+.++......++..++.++.|+++||+|||+.+..+.++.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 361 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV--STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAI 361 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 334444444444444445555667888888888 667778899999999999999999999999999999999888888
Q ss_pred HHHHHHhh-----h------cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC
Q 009250 167 GAIISAQA-----H------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 167 ~~~~~~~a-----~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 235 (539)
+.++.++. + +...+....++.+.......+....++.|.+|+++|++++++.+....+|.++++.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 362 CLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777621 1 233333333333333333456667788999999999999999999999999999999998
Q ss_pred CCCCcchhHHHHHhhHHHHHHHHHHhcc-cccc
Q 009250 236 AEDDPHWWRTMLYIASLPGFILALGMQF-TVES 267 (539)
Q Consensus 236 l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~ 267 (539)
+.+..+ |++.|++.++++++..++.++ .||+
T Consensus 442 ~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 442 MLESIG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHhcC-ccceehhHHHHHHHHHHHHheecccC
Confidence 888777 999999988888777766544 4554
No 160
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.30 E-value=4.8e-11 Score=116.44 Aligned_cols=158 Identities=20% Similarity=0.212 Sum_probs=112.0
Q ss_pred HhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccch
Q 009250 347 YFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 426 (539)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (539)
...|.+.++.+.+.. ..+...+...+...++ .++.|++.||+|||+.+..+.++.+++.++..... +
T Consensus 41 ~~l~~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------~ 107 (394)
T PRK10213 41 SLLTPMAQDLGISEG-VAGQSVTVTAFVAMFA----SLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--------S 107 (394)
T ss_pred hhHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--------h
Confidence 345667788877655 4455444444444333 99999999999999999999999888777665521 2
Q ss_pred hhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Q 009250 427 HNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLL 506 (539)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 506 (539)
.+..+..-.+.+.+.+ ...+....++.|.+|+++|+.+.++.....+++..++|.+.+.+.+..||+..|++.+++.++
T Consensus 108 ~~~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~ 186 (394)
T PRK10213 108 FSLLLIGRACLGLALG-GFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVL 186 (394)
T ss_pred HHHHHHHHHHHHHhhH-HHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 2222222222222222 234566677889999999999999999999999999999999999999999999888776665
Q ss_pred HHHhhheeeeCC
Q 009250 507 SALFAYYFIVET 518 (539)
Q Consensus 507 ~~~~~~~~~~~~ 518 (539)
..++.....||.
T Consensus 187 ~~l~~~~~~p~~ 198 (394)
T PRK10213 187 CIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHCCCC
Confidence 554443334543
No 161
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.29 E-value=1.3e-10 Score=116.16 Aligned_cols=159 Identities=8% Similarity=-0.045 Sum_probs=103.5
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
......+.|.+.++.+.+.. ..+.+.....+...++ .++.|+++||+|||+.+..+.++..++.++..+..
T Consensus 52 ~~~~~~~~~~l~~~~gls~~-~~g~~~~~~~~~~~~~----~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---- 122 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKS-DIGNAGIASVSGSIFS----RLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS---- 122 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc----
Confidence 33445566778888888755 3344444443333222 89999999999999998888877777766655521
Q ss_pred CccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH---------HhC
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE---------TFG 492 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~---------~~g 492 (539)
+....++.. +..+++.+.......++.|.+|+++||.+.|+.+...++|+.+++.+.+.+.. ..|
T Consensus 123 ----s~~~l~~~r--~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 123 ----SATGFIAVR--FFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred ----CHHHHHHHH--HHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 111122222 22222222222233567899999999999999998888888888777665432 147
Q ss_pred cchhhHHHHHHHHHHHHhhheee
Q 009250 493 VAPVYAGFGGVSLLSALFAYYFI 515 (539)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~ 515 (539)
|+..|++.+++.++..++.+++.
T Consensus 197 Wr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 197 WRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988887777666554443
No 162
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=4.6e-11 Score=118.34 Aligned_cols=154 Identities=15% Similarity=0.080 Sum_probs=114.1
Q ss_pred HHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHh---h-hcHHHHHHHHHHh
Q 009250 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ---A-HSLDEMLWGRFLV 187 (539)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a-~~~~~l~~~r~l~ 187 (539)
.+.+++|. +......+.....+...++.++.|+++||+|||+++..+.++..++.+.+.. . ++.+.+++..++.
T Consensus 276 y~~~~~g~--s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 276 YSTQNLGL--PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 44567787 5554455555666677788899999999999999998887766655443332 2 2344445566777
Q ss_pred hhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCc-chhHHHHHhhHHHHHHHHHHhcccc
Q 009250 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQFTV 265 (539)
Q Consensus 188 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~ 265 (539)
|++.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. ++|+..+...++..++..+..+.++
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 88888888888999999999999998888854 445589999999999887643 2388888888877777776666665
Q ss_pred cc
Q 009250 266 ES 267 (539)
Q Consensus 266 ~~ 267 (539)
|+
T Consensus 434 ~~ 435 (438)
T PRK09952 434 DN 435 (438)
T ss_pred cc
Confidence 54
No 163
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.26 E-value=2.6e-11 Score=120.49 Aligned_cols=158 Identities=22% Similarity=0.174 Sum_probs=138.8
Q ss_pred hcccccchhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHH
Q 009250 101 YHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDE 179 (539)
Q Consensus 101 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~ 179 (539)
+....+...+|.+. +++|. ++...|++.+++.+|..++.++.+++.+|+++++++..+.++++++.+..+++++.+.
T Consensus 232 l~~~a~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~ 309 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWL 309 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHH
Confidence 33333445677665 45777 8888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 259 (539)
.+++-++.|++.....+...+.+.+..|++.|||+++++.+....+..+|..+.|.+.+..+ -+..+.+.++..++..+
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888 88888887766555544
Q ss_pred Hh
Q 009250 260 GM 261 (539)
Q Consensus 260 ~~ 261 (539)
+.
T Consensus 389 ~~ 390 (524)
T PF05977_consen 389 IA 390 (524)
T ss_pred HH
Confidence 43
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=4.2e-11 Score=116.77 Aligned_cols=162 Identities=17% Similarity=0.202 Sum_probs=116.4
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
...+....|.+.++.+.+.. ..+.+.++..+...++ .++.|+++||+|||+.+..+.++..++.+++....
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 81 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKT-DLGLLLSSFSIAYGIS----KFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST---- 81 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHh-HHHHHHHHHHHHHHhh----hhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh----
Confidence 44455566777777777654 5555555555555444 99999999999999999999988888877776632
Q ss_pred CccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHH-HHHHHHHHHhCcchhhHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG-LFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~-~~~~~l~~~~g~~~~~~~ 499 (539)
.........+..+.+.+ ..+...+++.|.+|+++|+.+.++.+....+|..++| .+.+.+.+..+|+..|++
T Consensus 82 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T TIGR00881 82 ------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIV 155 (379)
T ss_pred ------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHH
Confidence 22222223333333333 3566778889999999999999999999999999999 466666677889998888
Q ss_pred HHHHHHHHHHhhheeeeCC
Q 009250 500 FGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~ 518 (539)
.+++.++..++.+++.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHHHHheeeCCC
Confidence 8877777666666666654
No 165
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.25 E-value=6.9e-11 Score=115.74 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=119.6
Q ss_pred HHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHH
Q 009250 333 LFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLL 412 (539)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 412 (539)
...+....+........|.+.++.+.+.. ..+...+...+...++ .++.|+++||+|||+.+..+.++..++..+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEA-QLHIAFSVYLAGMAAA----MLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33333333455555677888888887765 4444455544444333 899999999999999999888888777776
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 413 VVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
+.... +.+.... ..+..+.+.+. .+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 85 ~~~~~--------~~~~~~~--~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 85 CSLAE--------TSSLFLA--GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred HHHhC--------cHHHHHH--HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 65521 1122222 22222333222 3456678889999999999999999999999999999999888888
Q ss_pred CcchhhHHHHHHHHHHHHhhheeeeCCC
Q 009250 492 GVAPVYAGFGGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 492 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (539)
||+..+++.+++.++..++.....+|++
T Consensus 155 g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 155 PWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999898888777777666555566554
No 166
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.25 E-value=2.5e-10 Score=112.07 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=106.9
Q ss_pred hhHHHHHhHHHHHHH-cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc-CCchhhHhhHHHHHHHHHHHHHHhc
Q 009250 341 GINGVLYFSSLTFQD-VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE-GRQKLLIGSYLGMAISMLLVVGATS 418 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~ 418 (539)
.++.+..+++.++.+ .+.+.. ....+.+.......++ .+++|+++||+ |||+.+.++.++..++.+++....
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~-~a~~i~~~~~~~~~l~----~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~- 97 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDN-HAYELFSAYCSLVYVT----PILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE- 97 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh-
Confidence 455566667777654 466554 4555555555544333 88999999999 999999999998888876554311
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc--cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcch
Q 009250 419 LPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR--TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAP 495 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 495 (539)
.......+...+.. .+.+. .+...+++.|.+|++ .|+++.++.+...++|++++|.+.+++.+..||+.
T Consensus 98 ------~~~~~~~l~l~li~--iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 98 ------IHPSFLYLSLAIIV--CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred ------cchhHHHHHHHHHH--HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHH
Confidence 01111222222222 22232 355567889999875 69999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHh
Q 009250 496 VYAGFGGVSLLSALF 510 (539)
Q Consensus 496 ~~~~~~~~~~~~~~~ 510 (539)
.|.+.++..+++.+.
T Consensus 170 ~F~iaaigm~l~li~ 184 (493)
T PRK15462 170 GFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998866554444443
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=9.5e-11 Score=114.83 Aligned_cols=139 Identities=13% Similarity=0.061 Sum_probs=121.2
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHH
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~ 201 (539)
+....|++.++..+...++.++.|++.||+|+|+.+.++.++.+++..+...++|.+.+++.+++.|++..........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999999999988888888999999999999999988777777778
Q ss_pred HHhcCCCCccccchhh-hHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009250 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (539)
Q Consensus 202 i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (539)
..+..+++.++...+. ++....+|..+++.+++++.+..| |+..|.+.+++.++..+..
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 8888888888887766 678899999999999999999888 9999999888877766544
No 168
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.24 E-value=9.6e-11 Score=112.63 Aligned_cols=163 Identities=12% Similarity=-0.002 Sum_probs=110.1
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
...+....|.+.++.+.+.. +.+.+.+...+...++ .+..|+++||+|||+++.........+.. ....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~-~~g~~~s~~~~g~~i~----~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~----- 75 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKE-ELGLLAITYPAAFLAL----TIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD----- 75 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH-----
Confidence 33455667888888888755 5555555555544333 89999999999998876544443333322 1111
Q ss_pred CccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFG 501 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 501 (539)
......+...-+..+.+.+..........|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..|.+.+
T Consensus 76 ----~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~ 151 (368)
T TIGR00903 76 ----PFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIA 151 (368)
T ss_pred ----hccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 0112222222223333333333334555788999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhhheeeeCCC
Q 009250 502 GVSLLSALFAYYFIVETK 519 (539)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~ 519 (539)
++.++..++.++.+||.+
T Consensus 152 ~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 152 AVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 888777777667777643
No 169
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.23 E-value=2.3e-10 Score=111.94 Aligned_cols=156 Identities=13% Similarity=0.139 Sum_probs=109.9
Q ss_pred HHhHHH-HHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 346 LYFSSL-TFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 346 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
..+.+. +.++.+.+.. ..+...+...+...+. .++.|+++||+|||+.+..+..+..++.+.+...
T Consensus 30 ~~~~~~~~~~~~g~s~~-~~gl~~~~~~l~~~~~----~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-------- 96 (400)
T PRK11646 30 FPLISIRFVDQLGWAAV-MVGIALGLRQFIQQGL----GIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-------- 96 (400)
T ss_pred HHHHHHHHHHHhCCcHH-HHHHHHHHHHHHHHHH----HhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--------
Confidence 334444 4455666544 6666666655555333 8899999999999999999999888888777652
Q ss_pred chhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGV 503 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 503 (539)
++.+.+ .......+.+.+ ..+...+++.+..|+++|+++.|+.+...++|..++|.+.+.+. ..||+..|++.+.+
T Consensus 97 -~~~~~l-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 97 -HEPWLL-WLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred -ccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 122222 222222232222 34555677889999999999999999999999999999999988 67999989888777
Q ss_pred HHHHHHhhheeeeC
Q 009250 504 SLLSALFAYYFIVE 517 (539)
Q Consensus 504 ~~~~~~~~~~~~~~ 517 (539)
.++..++..+..++
T Consensus 174 ~~~~~i~~~~~~~~ 187 (400)
T PRK11646 174 FVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHhCCc
Confidence 66665554444554
No 170
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.22 E-value=4.6e-11 Score=120.69 Aligned_cols=166 Identities=15% Similarity=0.112 Sum_probs=118.9
Q ss_pred hhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHh
Q 009250 338 QFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 417 (539)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 417 (539)
............|.+.++.+.+.. ..+.+.....+...++ .++.|++.||+|||+.+..+.++..++.++....
T Consensus 14 ~~~~~~~~~~~~p~~~~~~g~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~- 87 (485)
T TIGR00711 14 AVLDSTIVNVAIPTIAGDLGSSLS-QVQWVITSYMLANAIS----IPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA- 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChh-hhhHHHHHHHHHHHHH----HHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-
Confidence 333455566778888888887644 3344444444444333 9999999999999999999988888877766542
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Q 009250 418 SLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPV 496 (539)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 496 (539)
+ ....+....+..+++.+ ..+....++.|.+|+++|+++.++......+|..++|.+.+.+.++.||++.
T Consensus 88 --------~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~ 158 (485)
T TIGR00711 88 --------P-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWI 158 (485)
T ss_pred --------C-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceeh
Confidence 1 22222222233333333 3466678889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhheeeeCC
Q 009250 497 YAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
|++.+.+.++..++..+..++.
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 159 FLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhhhHHHHHHHHHHHHHcCCc
Confidence 9888777766666555555543
No 171
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.22 E-value=6e-10 Score=98.55 Aligned_cols=176 Identities=15% Similarity=0.081 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
|..+....+.....+ ....++..-|.+++.+|+ |+.|...+.++..+|..+ +++.|.+.|++|++.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 444444444444433 445566677899999999 999999999999999886 5889999999999999999999999
Q ss_pred HHHHHHHhh-------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC
Q 009250 166 LGAIISAQA-------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 166 ~~~~~~~~a-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 238 (539)
+|..+...+ .++|.+.+..++.|.+.+....+......+.||+ +||.+.|+.-...+++..+-..+...+..
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 998887654 4788898889999998888778887778889985 69999999999999988777666555554
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccc
Q 009250 239 DPHWWRTMLYIASLPGFILALGMQFTVES 267 (539)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (539)
... -+..+.......++.++..+++++.
T Consensus 157 ~~~-~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 157 DDP-SSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred CCh-HHHHHHHHHHHHHHHHHHhhheecc
Confidence 443 4555555555555555555555443
No 172
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.22 E-value=1.4e-10 Score=113.04 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=115.2
Q ss_pred HHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCC
Q 009250 343 NGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLD 422 (539)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (539)
.......|.+.++.+.+.. ..+...+...+...++ .++.|++.||+|||+.+..+..+.+++.++.....
T Consensus 20 ~~~~~~l~~~~~~~g~s~~-~~g~~~s~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~----- 89 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIP-AAGHMISYYALGVVVG----APIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS----- 89 (382)
T ss_pred HHHHhChHHHHHHcCCCHH-HHhHHHHHHHHHHHHH----HHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 3445567778888877654 4455555555544333 99999999999999999999998888887766521
Q ss_pred ccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Q 009250 423 EDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFG 501 (539)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 501 (539)
+ ...+...-+..+.+.+. .+.....+.|.+|+++|+.+.++......++..++|.+.+.+.+..||+..|.+.+
T Consensus 90 ---~--~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 90 ---S--YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred ---c--HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 1 22222222233333222 34445667788998889999999999999999999999999999899999999888
Q ss_pred HHHHHHHHhhheeeeCCC
Q 009250 502 GVSLLSALFAYYFIVETK 519 (539)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~ 519 (539)
++.++..+..+...|+.+
T Consensus 165 ~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 165 VFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 877766655555566643
No 173
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=8.9e-11 Score=116.12 Aligned_cols=176 Identities=19% Similarity=0.171 Sum_probs=159.3
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhc--chHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG--CRRTFQIDTIPLI 165 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~ 165 (539)
.++.+.++..+..+...+....+|.+.++.+. ++.+++.+.++..+...++.++.|+++|+.. ++.+..+++++.+
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 46666777777777788888889999999998 8888899999999999999999999999988 5677778888899
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009250 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (539)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 245 (539)
++.+.++++++++.++..-.+.|++.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..+.|..
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 99999999999999999999999999988888888999999999999999999999999999999999999988887999
Q ss_pred HHHhhHHHHHHHHHHhcccc
Q 009250 246 MLYIASLPGFILALGMQFTV 265 (539)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~ 265 (539)
.|+..++..++..++.++.+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888887777665
No 174
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=1.6e-10 Score=114.54 Aligned_cols=137 Identities=16% Similarity=0.039 Sum_probs=103.3
Q ss_pred chhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhc--HHHHHHHH
Q 009250 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS--LDEMLWGR 184 (539)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~--~~~l~~~r 184 (539)
...+|.+.++.|. ++.+.+.+.+.+.++..++.++.|++.||+|||+.+..+.++..++.+.....++ ...+.+..
T Consensus 251 ~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 251 FGLLPTYLAGEGF--DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 3456777777777 7778888999999999999999999999999999999888877766655544332 22222222
Q ss_pred HHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009250 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (539)
Q Consensus 185 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~ 246 (539)
+..+.+..+..+....++.|.+|+++|++++|+......+|..++|.+.+++.+..+ +...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 222222223345566788999999999999999999999999999999999988776 5543
No 175
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.21 E-value=2.4e-10 Score=112.40 Aligned_cols=179 Identities=16% Similarity=0.091 Sum_probs=147.5
Q ss_pred HHHHHHHHHHhhhhhcccccch-hHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcch--HHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNG-PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIP 163 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~ 163 (539)
+.+....++.++..-..+.+.. ....-.+++|+ +..+...+.-+..+...+|++++|++.||+|.| +++..++++
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 3344445554544333333333 33455568999 888888888889999999999999999999999 999999988
Q ss_pred HHHHHHHHHh--------hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC
Q 009250 164 LILGAIISAQ--------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 164 ~~~~~~~~~~--------a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 235 (539)
+.+..+...+ .++-+.+.+.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||++-+.
T Consensus 359 ~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777776666 67888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHhhHHHHHHHHHHhcccccc
Q 009250 236 AEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (539)
Q Consensus 236 l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (539)
+.+..+.-|+.++...++.++.+++.++++.+
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 98887778999988888888887777666543
No 176
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.21 E-value=2.9e-11 Score=117.27 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=116.9
Q ss_pred hhHHHHHHH-hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhc-HHHHHHHHH
Q 009250 108 GPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS-LDEMLWGRF 185 (539)
Q Consensus 108 ~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~-~~~l~~~r~ 185 (539)
...|.+.++ +|. ++.+.+++.+.+.++..++.++.+++.||+|||+.+..+.++.+++.++..+.++ ++.+++..+
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGR--GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 455666665 787 8888899999999999999999999999999999999988888888888888774 888889999
Q ss_pred HhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 186 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
+.|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+++.+.+.
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887654
No 177
>PRK10504 putative transporter; Provisional
Probab=99.21 E-value=2.3e-10 Score=114.98 Aligned_cols=165 Identities=13% Similarity=0.018 Sum_probs=114.0
Q ss_pred hhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHh
Q 009250 338 QFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 417 (539)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 417 (539)
............|.+.++.+.+.. ..+.+.....+...++ .++.|+++||+|||+.+..+..+..++.+......
T Consensus 22 ~~~~~~~~~~~~p~~~~~~g~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 96 (471)
T PRK10504 22 QSLDTTIVNTALPSMAQSLGESPL-HMHMVIVSYVLTVAVM----LPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSG 96 (471)
T ss_pred HHHhHHHHHHHHHHHHHHhCcCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhC
Confidence 333445566678888888887765 3333334333333222 89999999999999999888777777666554411
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Q 009250 418 SLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPV 496 (539)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 496 (539)
+.+..++. ....+.+.+ ..+....++.|.+|+++|+++.|+.+...++|..++|.+.+.+.+..||++.
T Consensus 97 --------~~~~l~~~--~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~ 166 (471)
T PRK10504 97 --------TLNELLLA--RVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWI 166 (471)
T ss_pred --------CHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHH
Confidence 11222222 222233222 3455667788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhheeeeC
Q 009250 497 YAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~ 517 (539)
|.+...+..+..++.....++
T Consensus 167 f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 988877666666555444443
No 178
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.20 E-value=5.9e-10 Score=111.18 Aligned_cols=155 Identities=10% Similarity=0.070 Sum_probs=110.6
Q ss_pred hhHHHHHhHHHHHHH---cCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh-cCCchhhHhhHHHHHHHHHHHHHH
Q 009250 341 GINGVLYFSSLTFQD---VGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGA 416 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~ 416 (539)
.++.+..+++.++++ .+.+.. ..+.+.+...+...++ .+++|+++|| +|||+.+..+.++..++.+++...
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~-~ag~~~~~~~~~~~~~----~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~ 99 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQE-QAFIIFGAYSALVYLL----TSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS 99 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHH-HHHHHHHHHHHHHHHH----HhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc
Confidence 455566677777765 455543 5666666666555444 9999999999 899999999999988888777652
Q ss_pred hcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009250 417 TSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRT---RGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 492 (539)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g 492 (539)
. ............+.+.+ ..+...+++.+.+|++. |+++.++.+...++|.+++|.+.+.+.++.|
T Consensus 100 ~----------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 100 I----------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred c----------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 11122222223334333 34566677888887653 8889999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHh
Q 009250 493 VAPVYAGFGGVSLLSALF 510 (539)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (539)
|+..|.+.++..+++.+.
T Consensus 170 ~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999998877655554433
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.20 E-value=2.7e-10 Score=112.12 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=112.3
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
...+....+.+.++.+.+.. ..+.......+...++ .++.|+++||+|||+.+..+.....++.+......
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~---- 99 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAE-WVPTSMTAYLAGGMFL----QWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ---- 99 (406)
T ss_pred hhhHhcchHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc----
Confidence 33344445667777777654 4444445544444333 89999999999999999988887777766665521
Q ss_pred CccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGF 500 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~ 500 (539)
+. .......+..+.+.+. .+.....+.|.+|++.++.+.++......++..++|.+.+.+.+..+|+..+++.
T Consensus 100 -----~~-~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~ 173 (406)
T PRK15402 100 -----SI-EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLF 173 (406)
T ss_pred -----cH-HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 11 2222222222222222 3455677789999998999999998888899999999999999989999999888
Q ss_pred HHHHHHHHHhhheeeeCCC
Q 009250 501 GGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~ 519 (539)
+++.++..+..+...||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 174 AALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHhCCCCC
Confidence 8877777665555566553
No 180
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.20 E-value=2.9e-10 Score=114.54 Aligned_cols=175 Identities=13% Similarity=-0.006 Sum_probs=118.7
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHH
Q 009250 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLG 405 (539)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 405 (539)
+....+..+...........-.|.+.++.+.+.. .+....+.+..... .+..|+++||+|||+.+..+.++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~-------~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGM-------VLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHH-------HHHHHHHHHHhccHHHHHHHHHH
Confidence 3333444444444555666678888888876543 22333333333333 88999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccc-cCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 406 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPEL-SSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
..++.++..... +.+..++.-.+.+.+.+ +..+.....+.+. .|+++|+++.|+......+|..++|.+.
T Consensus 81 ~~~~~~~~~~a~--------~~~~li~~r~l~G~g~~-~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lg 151 (495)
T PRK14995 81 FGLASLAAAFSP--------TASWLIATRALLAIGAA-MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVG 151 (495)
T ss_pred HHHHHHHHHHcC--------CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888776621 22222222222332222 2334334444454 4678899999999999999999999999
Q ss_pred HHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCC
Q 009250 485 LDLVETFGVAPVYAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 485 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
+.+.++.||++.|++...+.++..++..+..|+.
T Consensus 152 g~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 152 GILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999988877777666665556553
No 181
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.20 E-value=4.1e-10 Score=109.23 Aligned_cols=163 Identities=18% Similarity=0.144 Sum_probs=106.3
Q ss_pred hhHHHHHhHHH-HHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcC
Q 009250 341 GINGVLYFSSL-TFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSL 419 (539)
Q Consensus 341 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 419 (539)
.......+.|. +.++.+.+.. ..+.+.++..+...++ .++.|+++||+|||+.+..+.++..++.+++....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~-- 88 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTA-QLGNLVAVPVLAGAVL----RIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV-- 88 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHH-HhhHhhHHHHHHHHHH----HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh--
Confidence 44455566674 5567777655 5555556555555444 99999999999999999999988888877776522
Q ss_pred CCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH---------
Q 009250 420 PLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET--------- 490 (539)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~--------- 490 (539)
.+...+. ...+..+.+.+..+....++.|.+|+++|+.+.++.....++|..+++.+.+.+...
T Consensus 89 ------~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 89 ------QSYSVLL-LLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred ------hhHHHHH-HHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0222222 222222333333344557788999999999999999988888888888887776653
Q ss_pred -hCcchhh-HHHHHHHHHHHHhhheeeeC
Q 009250 491 -FGVAPVY-AGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 491 -~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 517 (539)
.+|++.+ ...+++..+..++.+...++
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 3788887 43344444444443344443
No 182
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.19 E-value=3.4e-10 Score=110.94 Aligned_cols=160 Identities=16% Similarity=0.085 Sum_probs=109.8
Q ss_pred HHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 345 VLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
.....|.+.++.+.+.. ..+...+...+...++ .++.|+++||+|||+.+..+..+..++.+......
T Consensus 27 ~~p~~~~i~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~------- 94 (394)
T PRK11652 27 YVPAIADMARDLNVREG-AVQAVMAAYLLTYGLS----QLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH------- 94 (394)
T ss_pred HhccHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc-------
Confidence 33345777788877755 5555555555555333 99999999999999999988887777776655421
Q ss_pred chhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGV 503 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 503 (539)
+ ...+....+..+.+.+. .+....+..|.++++.++.+.++.+....++..++|.+.+.+.+..||+..|++.+++
T Consensus 95 -~--~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~ 171 (394)
T PRK11652 95 -S--LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLL 171 (394)
T ss_pred -c--HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 1 12222222222222222 3444456678888888999999999999999999999999999889999999888776
Q ss_pred HHHHHHhhheeeeCCC
Q 009250 504 SLLSALFAYYFIVETK 519 (539)
Q Consensus 504 ~~~~~~~~~~~~~~~~ 519 (539)
.++..++..++.||++
T Consensus 172 ~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 172 GAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHhCCccC
Confidence 6665555445566643
No 183
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.19 E-value=3.6e-10 Score=111.03 Aligned_cols=157 Identities=17% Similarity=0.076 Sum_probs=109.7
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhh
Q 009250 349 SSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHN 428 (539)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (539)
+|.+.++.+.+.. ......++..+...++ .++.|+++||+|||+++..+..+..++.++..... +.+
T Consensus 39 l~~i~~~~~~~~~-~~~~~~s~~~~~~~~~----~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--------~~~ 105 (413)
T PRK15403 39 IINVVRDFNADVS-LAPASVSLYLAGGMAL----QWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--------SMT 105 (413)
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--------CHH
Confidence 3455566666544 4444555555554333 89999999999999999988888877776665521 222
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHH
Q 009250 429 LSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 508 (539)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 508 (539)
..++.-++.+.+.+ ...+....+..|.+|+++++++.++.+....++..++|.+.+.+.+..||+..|++.+++.++..
T Consensus 106 ~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 106 QFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 22222222222222 12334456778899999899999999999999999999999999888899999998888777776
Q ss_pred HhhheeeeCCC
Q 009250 509 LFAYYFIVETK 519 (539)
Q Consensus 509 ~~~~~~~~~~~ 519 (539)
++.++..||++
T Consensus 185 ~~~~~~lp~~~ 195 (413)
T PRK15403 185 VGLLLAMPETV 195 (413)
T ss_pred HHHHHhCCCCc
Confidence 65555566653
No 184
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.19 E-value=2.8e-10 Score=113.36 Aligned_cols=157 Identities=14% Similarity=0.058 Sum_probs=109.5
Q ss_pred ccchhHHHHHH-HhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh--cchHHH-HHHHHHHHHHHHHHHh--hhcHH
Q 009250 105 VMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTF-QIDTIPLILGAIISAQ--AHSLD 178 (539)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--a~~~~ 178 (539)
.....+|.+.+ ++|. +..+.+++.+.+.++..++.++.|+++||+ |||+.. .....+..++.++..+ ..+.+
T Consensus 271 ~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 348 (452)
T PRK11273 271 GILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPT 348 (452)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChH
Confidence 34456666554 4788 677788889999999999999999999999 555433 2223333333333322 23455
Q ss_pred HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHH-HHHHhcCCCCCCcchhHHHHHhhHHHHHHH
Q 009250 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII-TSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (539)
Q Consensus 179 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 257 (539)
.+.++.++.|.+..........+..|.+|+++||+++|+.+....+|.. ++|.+.+.+.+..+ |+..|++.++.+++.
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~ 427 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILA 427 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHH
Confidence 5555555556543333333445678999999999999999888888765 47999999988888 999999888877777
Q ss_pred HHHhccc
Q 009250 258 ALGMQFT 264 (539)
Q Consensus 258 ~~~~~~~ 264 (539)
++....+
T Consensus 428 ~~~~~~~ 434 (452)
T PRK11273 428 VILLIVV 434 (452)
T ss_pred HHHHHHH
Confidence 6655543
No 185
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=1.1e-09 Score=109.76 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=122.8
Q ss_pred HHHHHHHhCCCCCchhhHHHHH-HHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH---Hhh-hcHHHHHHHH
Q 009250 110 IVSIAKELGFEGNPILEGLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGR 184 (539)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r 184 (539)
.|.+.+++|. +..+.+++.. ...++..++.++.|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-
T Consensus 246 ~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3455667888 8888899874 5668999999999999999999998877766655544332 333 4555556667
Q ss_pred HHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 185 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
+++.++.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..| |+..|.+.++.+++..+...++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 776666676777778889999999999999999999999999988889999988887 9999999998888887766665
Q ss_pred ccc
Q 009250 265 VES 267 (539)
Q Consensus 265 ~~~ 267 (539)
+++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 186
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.19 E-value=1.3e-10 Score=115.24 Aligned_cols=162 Identities=17% Similarity=0.135 Sum_probs=107.7
Q ss_pred HHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 345 VLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
.....|.+.+ .+.+.. ..+...++..+...++ .++.|+++||+|||+.+..+.++.+++.+++......
T Consensus 46 ~~~~~p~~~~-~g~s~~-~~g~~~~~~~~~~~~~----~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 114 (438)
T TIGR00712 46 FALAMPYLVE-QGFSKG-ELGFALSAISIAYGFS----KFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----- 114 (438)
T ss_pred HHhhhHHHHH-cCCCHh-HhHHHHHHHHHHHHHh----hhccchhhhccCCceehHHHHHHHHHHHHHHhccccc-----
Confidence 3444555544 565544 5555666555555444 9999999999999999888888777776665442110
Q ss_pred chhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH-HhCcchhhHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE-TFGVAPVYAGFGG 502 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~~~~~~~ 502 (539)
...........+..+.+.+ ..+.....+.|.+|+++|+++.|+.+....+++.+++.+.+...+ ..||+..|++.++
T Consensus 115 -~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~ 193 (438)
T TIGR00712 115 -TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAI 193 (438)
T ss_pred -cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 1112222222222232222 234455667799999999999999999999999999988876554 4689999998888
Q ss_pred HHHHHHHhhheeeeCC
Q 009250 503 VSLLSALFAYYFIVET 518 (539)
Q Consensus 503 ~~~~~~~~~~~~~~~~ 518 (539)
+.++..++.+++.+|.
T Consensus 194 ~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 194 CAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHHHHhccCC
Confidence 8777666655556553
No 187
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.17 E-value=7.2e-11 Score=113.85 Aligned_cols=160 Identities=19% Similarity=0.192 Sum_probs=113.0
Q ss_pred hHHHHHhHH-HHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCC
Q 009250 342 INGVLYFSS-LTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 420 (539)
Q Consensus 342 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 420 (539)
........+ .+.++.+.+.. ..+.+.+...+...++ .++.|+++||+|||+.+..+.++..++.++..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--- 83 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPS-QIGLLFSAFFLGSALF----SPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS--- 83 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSH-CHHHHHHHHHHHHHHH----HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHccCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh---
Confidence 333444555 55566665544 4555555555544333 99999999999999999999998888844444311
Q ss_pred CCccchhhHHHHHHHHHHHHHh-cccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHH
Q 009250 421 LDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 499 (539)
+.+ .+....+..+.+ ....+....++.|.+|+++|+.+.++.+....+|..++|.+.+.+.+..||+..|++
T Consensus 84 -----~~~--~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~ 156 (352)
T PF07690_consen 84 -----NFW--LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI 156 (352)
T ss_dssp -----CHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred -----hHH--HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence 223 223333333333 334566778899999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHhhheeee
Q 009250 500 FGGVSLLSALFAYYFIV 516 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~ 516 (539)
.+++.++..++...+.+
T Consensus 157 ~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 157 SAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHHHHHHCCC-
T ss_pred ccchhhhhhhhHhhhhh
Confidence 99888888775434443
No 188
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.15 E-value=1.5e-09 Score=108.31 Aligned_cols=151 Identities=11% Similarity=0.109 Sum_probs=102.3
Q ss_pred hhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh-cCCchhhHhhHHHHHHHHHHHHHHhc
Q 009250 341 GINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATS 418 (539)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~ 418 (539)
.++.+..+++.++ ++.+.+.. ....+.+.......+. .+++|+++|| +|||+++..+.++..++.+.+.+..
T Consensus 29 ~~y~~~~~l~~yl~~~lg~~~~-~a~~i~~~~~~~~~~~----~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~- 102 (489)
T PRK10207 29 GYYGVQGILAVFFVKQLGFSQE-QAFITFGAFAALVYGL----ISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL- 102 (489)
T ss_pred HHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444444444444 55666654 3334443333333222 6789999999 9999999999999999888776622
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcc--cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcch
Q 009250 419 LPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNR--TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAP 495 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 495 (539)
.... .+.......+.+.+ ..+...+++.|.+|++ +|+.++++.+...++|.+++|.+.+++.++.||++
T Consensus 103 -------~~~~-ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~ 174 (489)
T PRK10207 103 -------LKPD-LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSV 174 (489)
T ss_pred -------cchh-HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHH
Confidence 1111 12122222334333 3466678899999877 45789999999999999999999999999999999
Q ss_pred hhHHHHHHHH
Q 009250 496 VYAGFGGVSL 505 (539)
Q Consensus 496 ~~~~~~~~~~ 505 (539)
.|++.++..+
T Consensus 175 ~F~i~~i~~~ 184 (489)
T PRK10207 175 TYNLCGAGLI 184 (489)
T ss_pred HHHHHHHHHH
Confidence 9988654333
No 189
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.14 E-value=5.1e-10 Score=109.44 Aligned_cols=149 Identities=15% Similarity=-0.005 Sum_probs=116.2
Q ss_pred hHHHHHHHhCCCCCchhhHHHHHHHHH-HHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHh------hhcHHHHH
Q 009250 109 PIVSIAKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ------AHSLDEML 181 (539)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a~~~~~l~ 181 (539)
..+.+.+|.|+ ++.++|++...... ...++.++.|++.||+|+|+.+..+.++.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 44556677888 88888998887764 66677899999999999999998877766443333221 23344455
Q ss_pred HHHHHhhhchhhhhhhHHHHHHhcCCC-CccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009250 182 WGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (539)
Q Consensus 182 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (539)
....+.+++.+...+...+.+.+..++ +++++.+++.+...++|..++|.+++.+.+..+ |+..|++.+++.++..+.
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 566677777888888888888888776 789999999999999999999999999998887 999999888777765543
No 190
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.13 E-value=2.5e-09 Score=103.86 Aligned_cols=182 Identities=13% Similarity=0.026 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhHHHHHH-HcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHH
Q 009250 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYL 404 (539)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~ 404 (539)
+.+....+.+...+..........+.+.+ +.+.+.. +.+.+.++..+.+.+. ++..|++.||+|.|+++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~-q~g~l~ai~~l~~al~----rip~G~l~Dr~G~R~v~~~~~l 108 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTD-QLFLLTALPSVSGALL----RVPYSFMVPIFGGRRWTVFSTA 108 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCChHHHHHHHH
Confidence 33444444444444333334444444444 5666655 5666666666666444 8889999999999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 405 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
+..+..+.+.+..... ......+....+..+.+.+..+.....+++.+|+++||++.|+....+++|..+++.+.
T Consensus 109 l~~i~~~~~~~a~~~~-----~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 109 ILIIPCVWLGIAVQNP-----NTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 8887777666531100 11222222222333333334455667788999999999999999777777777666655
Q ss_pred HHHH-----HHhC-------------cchhhHHHHHHHHHHHHhhheeeeC
Q 009250 485 LDLV-----ETFG-------------VAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 485 ~~l~-----~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
+.+. +..| ++...++...+.++..++.+++.++
T Consensus 184 p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 184 PLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5433 3232 4445556666666666665555544
No 191
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=5.5e-10 Score=105.86 Aligned_cols=153 Identities=16% Similarity=0.092 Sum_probs=110.3
Q ss_pred HHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 345 VLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
+..++--++++.+... ++.++..+....|.++.-++.+++.+|+|+-+++.+++.+..+=++.+..+.
T Consensus 390 v~tFLfWHled~~~~~-----~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~------- 457 (618)
T KOG3762|consen 390 VFTFLFWHLEDLGGIK-----TLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ------- 457 (618)
T ss_pred HHHHHHHHHhhcCCcc-----eeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc-------
Confidence 3344444456655333 3444555566666777799999999999999999999998888888777642
Q ss_pred chhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHH-HHHHHHHHHHHHHHHHhCcchhhHHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHW-VCNFLVGLFFLDLVETFGVAPVYAGFGGV 503 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 503 (539)
+.|..+..-++-+...+.. +....+|+....||+.++++.|+...... +|-.+|+++.|.+.+.+|-+..|.++++.
T Consensus 458 -n~W~vLPieilqgit~ali-Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 458 -NPWMVLPIEILQGITHALI-WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred -CchheeeHHHHHHHHHHHH-HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 3333333333333333333 33345888999999999999999887764 78889999999999999999999988888
Q ss_pred HHHHHHhh
Q 009250 504 SLLSALFA 511 (539)
Q Consensus 504 ~~~~~~~~ 511 (539)
+++..++.
T Consensus 536 cl~~l~~~ 543 (618)
T KOG3762|consen 536 CLVTLALF 543 (618)
T ss_pred HHHHHHHH
Confidence 77776654
No 192
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.13 E-value=9.1e-10 Score=111.28 Aligned_cols=161 Identities=17% Similarity=0.082 Sum_probs=108.4
Q ss_pred hhHHHHHHHhCCCCCchh---------hHH-HHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhc-
Q 009250 108 GPIVSIAKELGFEGNPIL---------EGL-VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS- 176 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~---------~~~-~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~- 176 (539)
...|.+.++.|.+.+... ... ...+..++..++.++.++++||+|||++++++..+.+++.++.++..+
T Consensus 309 ~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 309 LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 346777778887422110 011 233444566678889999999999999999988888777766654321
Q ss_pred ---HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCc---------chhH
Q 009250 177 ---LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------HWWR 244 (539)
Q Consensus 177 ---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------~~wr 244 (539)
...+...-+...++..+..+....+.+|.+|.+.|+++.++.+....+|.++++.+.+.+.+.. .++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 468 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG 468 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence 1112211111122222244566677899999999999999999999999999999998887632 1146
Q ss_pred HHHHhhHHHHHHHHHHhcccccch
Q 009250 245 TMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
..|++.++..++..+..+++||+.
T Consensus 469 ~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 469 HVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHHHHheEeccCC
Confidence 677887777777666666778864
No 193
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.13 E-value=4e-10 Score=109.81 Aligned_cols=158 Identities=18% Similarity=0.225 Sum_probs=114.3
Q ss_pred HHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccc
Q 009250 346 LYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 425 (539)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (539)
....|.+.++.+.+.. ..+...++..+...++ .++.|+++||+|||+.+..+.++..++...+....
T Consensus 11 ~p~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~----~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-------- 77 (377)
T PRK11102 11 LPALPVIAADFGVSAG-SVQMTLSAYILGFAIG----QLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-------- 77 (377)
T ss_pred hccHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--------
Confidence 3455677777777654 5555555555555444 99999999999999999999888888877776522
Q ss_pred hhhHHHHHHHHHHHHHhcc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHH
Q 009250 426 SHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 504 (539)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 504 (539)
+.+. .....+..+++.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..|++.+.+.
T Consensus 78 ~~~~--~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 78 TIDQ--LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAA 155 (377)
T ss_pred cHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 1122 2222222233222 234556778899999999999999999999999999999999999999999998888777
Q ss_pred HHHHHhhheeeeCC
Q 009250 505 LLSALFAYYFIVET 518 (539)
Q Consensus 505 ~~~~~~~~~~~~~~ 518 (539)
++..++..+..+|+
T Consensus 156 ~~~~~~~~~~~~~~ 169 (377)
T PRK11102 156 ILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHhCCcc
Confidence 77766655555554
No 194
>PRK15075 citrate-proton symporter; Provisional
Probab=99.12 E-value=1.3e-09 Score=107.97 Aligned_cols=136 Identities=18% Similarity=0.077 Sum_probs=99.0
Q ss_pred cccchhHHHHHH-HhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH-H---HhhhcHH
Q 009250 104 GVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII-S---AQAHSLD 178 (539)
Q Consensus 104 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~a~~~~ 178 (539)
.......|.+.+ .+|. +..+.++....+.++..++.++.|+++||+|||+++..+..+..+..+. . ...+++.
T Consensus 255 ~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK15075 255 YLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFA 332 (434)
T ss_pred HHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 334445666555 4788 7777788888999999999999999999999999988765544332221 1 1224444
Q ss_pred HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCcc
Q 009250 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH 241 (539)
Q Consensus 179 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~ 241 (539)
.+.+..++.|++.+...+....++.|.+|+++|+.+.++.. .+..++..++|.+.+++.+..+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 333 RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 45555666777777777777788999999999999999864 4444557778888888887766
No 195
>PRK11043 putative transporter; Provisional
Probab=99.12 E-value=1.8e-09 Score=106.10 Aligned_cols=152 Identities=14% Similarity=0.104 Sum_probs=105.2
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhh
Q 009250 349 SSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHN 428 (539)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (539)
.+.+.++.+.+.. ..+...++..+...++ .++.|+++||+|||+.+..+..+..++.++..... +.
T Consensus 29 ~~~i~~~~~~s~~-~~g~~~s~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~ 94 (401)
T PRK11043 29 FKAIQADLQTSAS-AVSASLSLFLAGFALG----QLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE---------SA 94 (401)
T ss_pred HHHHHHHHCCCHH-HHHHHHHHHHHHHHHH----HHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc---------CH
Confidence 3445667776654 5566666655555444 99999999999999999988887777766665421 11
Q ss_pred HHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHH
Q 009250 429 LSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLS 507 (539)
Q Consensus 429 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 507 (539)
..+....+..+.+.+. .+.....+.|.+|+++++...+..+....++..++|.+.+.+.+..||+..|++.+++.++.
T Consensus 95 -~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~ 173 (401)
T PRK11043 95 -AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLL 173 (401)
T ss_pred -HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 1222222222222222 23344667788999888889999888889999999999999999999999998887777776
Q ss_pred HHhhheee
Q 009250 508 ALFAYYFI 515 (539)
Q Consensus 508 ~~~~~~~~ 515 (539)
.++.+...
T Consensus 174 ~~~~~~~~ 181 (401)
T PRK11043 174 ILPTLRLK 181 (401)
T ss_pred HHHHHHcC
Confidence 65544433
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.12 E-value=1.3e-09 Score=100.94 Aligned_cols=172 Identities=19% Similarity=0.117 Sum_probs=127.2
Q ss_pred HHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHH
Q 009250 332 ALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISML 411 (539)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 411 (539)
...+...++....+....+.+-++.+.+.. +..++..+..+.+.+. ++..|.+.||+|.|++...+.++..+-.+
T Consensus 20 ~~af~v~F~VW~l~s~l~~~i~~~~~LS~~-q~~ll~aiPil~Gall----Rl~~g~l~drfGgR~~~~~s~~l~~IP~~ 94 (417)
T COG2223 20 TLAFDVGFMVWTLFSPLGVFIKSDFGLSEG-QKGLLVAIPILVGALL----RLPYGFLTDRFGGRKWTILSMLLLLIPCL 94 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCHH-HHHHHHHHHHHHhHHH----HHHHHhhhcccCchHHHHHHHHHHHHHHH
Confidence 333333333444444455555577777665 7777777777777555 99999999999999999999999888888
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 412 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
.+.+....+ +. +.+..+....+.+.+........+++.+|++++|.++|++. .+|+|..+...+.+.+....
T Consensus 95 ~~~~a~~~~-----~~--~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 95 GLAFAVTYP-----ST--WQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHccCC-----ch--HHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 887755322 11 33333444445555556666788999999999999999999 99999999999999999988
Q ss_pred C---cchhhHHHHHHHHHHHHhhheeee
Q 009250 492 G---VAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 492 g---~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
| |+....+.....++..++.++..+
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8 888877777777777777666554
No 197
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=2.9e-10 Score=115.34 Aligned_cols=138 Identities=19% Similarity=0.080 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcH--HHHHHHHHHhhhchhhhhhhHHHHHHhc
Q 009250 128 LVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRFLVGLGIGVNTVLVPIYISEV 205 (539)
Q Consensus 128 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 205 (539)
+......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566677888999999999999999999999999998888877654 4555666777788888888999999999
Q ss_pred CCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccch
Q 009250 206 APTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 206 ~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
+|++.|+.++|+.+....+|.+++|.+.+ +. ..+ +...+++.+...++..++.+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKW-LFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHH-HhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 99999999999999999999999999988 43 333 67788888888888877777888763
No 198
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=9.5e-10 Score=101.82 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=148.0
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
..+++.-..+.++.+. +.......-..++|+ ++.+..++.....+..+++++++|+|.||+|.|+++..++++..+.
T Consensus 255 ~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 255 VLFLIARFFYIDGVNT-ILAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 3444444445555443 222222333459999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009250 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (539)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 247 (539)
++..-+...-..+.++-.+.|...|..+....++..+..|+++-++.+|+++...-.+..+||.+-+.+.+..+.-|.-+
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 99988888877788888999999999999999999999999999999999999999999999999999888777788888
Q ss_pred HhhHHHHHHHHHHhcccccc
Q 009250 248 YIASLPGFILALGMQFTVES 267 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~ 267 (539)
....++..+.++..+.+|++
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 87777777777777777654
No 199
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.10 E-value=9.8e-11 Score=109.15 Aligned_cols=167 Identities=13% Similarity=0.090 Sum_probs=120.9
Q ss_pred HHHHHhHHHHHHHcCCChh--HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCC
Q 009250 343 NGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 420 (539)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 420 (539)
+.+....+...+..+.++. ........+...+. +++.|++.||+.|++++.+|..+-.++.+...+.
T Consensus 50 ~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~-------sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs---- 118 (493)
T KOG1330|consen 50 YTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIA-------SPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS---- 118 (493)
T ss_pred hhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHH-------HHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH----
Confidence 3333333333333444433 33444445555554 9999999999999999999999998888887773
Q ss_pred CCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHH
Q 009250 421 LDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAG 499 (539)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~ 499 (539)
.+.+.++..=.+.+..-..+.|+...+++|.+|..+|++++++.+....+|..+|-...+.+.+..+ |++.|..
T Consensus 119 -----~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~ 193 (493)
T KOG1330|consen 119 -----NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRG 193 (493)
T ss_pred -----HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEe
Confidence 2222222222222222344568888999999999999999999999999999999888888887777 9999999
Q ss_pred HHHHHHHHHHhhheeeeCCCCCCHHH
Q 009250 500 FGGVSLLSALFAYYFIVETKGRSLEE 525 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (539)
.+++.++.+++..++.+|..++..++
T Consensus 194 ~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 194 SAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred ehHHHHHHHHHHHhhccCcccccccc
Confidence 99999999998888888776654333
No 200
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.09 E-value=1.5e-09 Score=101.66 Aligned_cols=160 Identities=13% Similarity=0.095 Sum_probs=120.3
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHHHH---hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKE---LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
.+.+..++.++.......+....+.+.++ +|+ ++.+.++..+.+..+..++.++.+++.||+|+|+++.++..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 34444444444443344444444544443 566 8888899999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
.++.++....++...+ .+-++.|++.+..+|...+...+..+++ .+.+.++. ....+|..+.|++.|.+.+..+ .+
T Consensus 219 ~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~ 294 (310)
T TIGR01272 219 VLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQ 294 (310)
T ss_pred HHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-ch
Confidence 8887777666554333 4566899999999999999999988765 45666665 5667899999999999988777 88
Q ss_pred HHHHhhHHH
Q 009250 245 TMLYIASLP 253 (539)
Q Consensus 245 ~~f~~~~~~ 253 (539)
..|++..+.
T Consensus 295 ~a~~v~~~~ 303 (310)
T TIGR01272 295 LAFALPVPC 303 (310)
T ss_pred HHHHHHHHH
Confidence 888754433
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.08 E-value=2.5e-09 Score=104.43 Aligned_cols=153 Identities=16% Similarity=0.054 Sum_probs=101.6
Q ss_pred HhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccch
Q 009250 347 YFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 426 (539)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (539)
...+.+.++.+.+.. ..+.+.....+...+. .++.|+++||+|||+++..+.++..++.+.+....
T Consensus 24 ~~~~~~~~~~~~s~~-~~~~~~~~~~l~~~l~----~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~--------- 89 (393)
T PRK11195 24 FAAIALLKELHYPDW-SQPLLQMFFVLAYIVL----APFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI--------- 89 (393)
T ss_pred HHHHHHHHHcCCcHH-HHHHHHHHHHHHHHHH----HhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH---------
Confidence 334445566665543 4455555555554333 99999999999999999999988877766554421
Q ss_pred hhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Q 009250 427 HNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLL 506 (539)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 506 (539)
+. ++.. ++.+.......|...+++.|.+|+++|+++.|+.+....++..+||.+.|.+.+.. +...+.+.+.+.++
T Consensus 90 ~~--~~~r-~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~ 165 (393)
T PRK11195 90 HP--LLAY-GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLL 165 (393)
T ss_pred HH--HHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 11 2222 22222233345777889999999999999999999999999999999999998864 55555554444333
Q ss_pred HHHhhheeeeCC
Q 009250 507 SALFAYYFIVET 518 (539)
Q Consensus 507 ~~~~~~~~~~~~ 518 (539)
+. +..+.+||.
T Consensus 166 ~~-~~~~~l~~~ 176 (393)
T PRK11195 166 AA-LFNLFIPRL 176 (393)
T ss_pred HH-HHHhcCCCC
Confidence 33 233455543
No 202
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=2.5e-09 Score=105.95 Aligned_cols=156 Identities=12% Similarity=-0.009 Sum_probs=100.5
Q ss_pred hhHHHH-HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH--h--hhcHHHHHH
Q 009250 108 GPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q--AHSLDEMLW 182 (539)
Q Consensus 108 ~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a~~~~~l~~ 182 (539)
..+|.+ .+++|. +..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . .++....+.
T Consensus 264 ~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 264 TYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 345554 456787 777778888888888889999999999999999988877665444333221 1 223332222
Q ss_pred HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHH-HHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009250 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (539)
Q Consensus 183 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (539)
.-++.+++.+...+....++.|++|++.|+.++|+.+....+ .....|.+.+.+. ..+.|...++..++..++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHH
Confidence 222233334444455677889999999999999998765443 3444667666553 33436666666666666665555
Q ss_pred ccccc
Q 009250 262 QFTVE 266 (539)
Q Consensus 262 ~~~~~ 266 (539)
+++++
T Consensus 421 ~~l~~ 425 (432)
T PRK10406 421 LMLHR 425 (432)
T ss_pred HHhhh
Confidence 55433
No 203
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=1.7e-09 Score=107.61 Aligned_cols=118 Identities=23% Similarity=0.200 Sum_probs=100.7
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHhhhchhhhhhhHHH
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNTVLVPI 200 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~~~~~ 200 (539)
++.+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566788888899999999999999999999999999999888888877765 46677778889999999999999999
Q ss_pred HHHhcCC-------CCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 201 YISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 201 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
+++|..+ ++++|.+.++.+....+|..+++.+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 45579999999999999999999888876543
No 204
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.07 E-value=6.8e-10 Score=107.11 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=108.5
Q ss_pred cchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-cchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHH
Q 009250 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDEMLWGR 184 (539)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r 184 (539)
....+|.+.++.|. +..+.+++.+.+.++..++.++.|++.||+ +||+.+..+.++.+++.+++.+.++..... .-
T Consensus 216 ~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 34456777778887 788889999999999999999999999999 567777788888888877777765543332 45
Q ss_pred HHhhhchhhhhhhHHHHHHhcCC-CCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009250 185 FLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (539)
Q Consensus 185 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 244 (539)
++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.++|.
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 78899999999888777776555 4567888898888888999999999999887766443
No 205
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.07 E-value=2.7e-09 Score=107.13 Aligned_cols=154 Identities=13% Similarity=0.098 Sum_probs=99.0
Q ss_pred hhHHHHHhHHHHH-HHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhh-cCCchhhHhhHHHHHHHHHHHHHHhc
Q 009250 341 GINGVLYFSSLTF-QDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATS 418 (539)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~ 418 (539)
.++.+..+.+.++ ++.+.+.. ................ .+++|+++|| +|||+.+..+.++..++..++.+..
T Consensus 36 ~~y~~~~~l~~yl~~~lg~s~~-~a~~~~~~~~~~~~~~----~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~- 109 (500)
T PRK09584 36 GYYGLQGIMAVYLVKQLGMSEA-DSITLFSSFSALVYGL----VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG- 109 (500)
T ss_pred HHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444555555555 56676654 3333333222222111 4689999999 5999999999988888876665521
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcch
Q 009250 419 LPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRT--RGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAP 495 (539)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 495 (539)
... ..+.......+.+.+ ..+...++..|.+|++. ++.+.++.+...++|.+++|.+.+++.++.||+.
T Consensus 110 -------~~~-~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~ 181 (500)
T PRK09584 110 -------HDA-GIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSV 181 (500)
T ss_pred -------ccH-HHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHH
Confidence 111 112222222233333 34555677889887643 4567888899999999999999999999999999
Q ss_pred hhHHHHHHHHHHH
Q 009250 496 VYAGFGGVSLLSA 508 (539)
Q Consensus 496 ~~~~~~~~~~~~~ 508 (539)
.|.+.++..+++.
T Consensus 182 ~F~i~~i~~~i~~ 194 (500)
T PRK09584 182 AFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765444443
No 206
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.04 E-value=8.8e-08 Score=91.90 Aligned_cols=106 Identities=11% Similarity=-0.029 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 209 (539)
.++-+..+.+++++.+.+.|+.|+|..++++...+....+..-+- |-+.++++-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 778888888999999999999999999999999999888877664 4666888999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 210 YRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 210 ~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
++.+..++.......+.++|..+-..+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 999999998888888888886665443
No 207
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.03 E-value=1.6e-09 Score=88.91 Aligned_cols=125 Identities=14% Similarity=0.164 Sum_probs=93.1
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRT 461 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~ 461 (539)
.++.+++.||++||+.+..+.....++.+.+.... +.+.... .....+.+.+ ..+....+..|..|+++
T Consensus 15 ~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 15 SPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--------NITVLII--ARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred HhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--------cHHHHHH--HHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 88999999999999998888877777766654421 1222222 2222222222 34566678889999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeC
Q 009250 462 RGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVE 517 (539)
Q Consensus 462 ~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (539)
|+++.++.+....++..++|.+.+.+.+..+++..+.+.+.+.++..+..+...+|
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999988898888888887777776666555443
No 208
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.03 E-value=2.4e-09 Score=99.68 Aligned_cols=147 Identities=11% Similarity=0.125 Sum_probs=106.8
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh----hhcchHHHHH-HHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTFQI-DTIP 163 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~-~~~~ 163 (539)
++.++...+-..+....-....+++.++.|+ +....+.+--+.-+...+.+++.|..+| ||||||.++. +.+.
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGv--phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGV--PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCC--CcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3333433344444444445566777788888 5555566666777777889999999999 5898877666 5556
Q ss_pred HHHHHHHHHhhhcHH-----------------HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCcccc-chhhhHHHHHHH
Q 009250 164 LILGAIISAQAHSLD-----------------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS-LGTLCQVGTCLG 225 (539)
Q Consensus 164 ~~~~~~~~~~a~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G 225 (539)
.+++.++.+++.++. .++++-.+.=++.-.....+-+++.|...++++.+ +++.+....++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 677777777775443 34445556666777788899999999998777666 999999999999
Q ss_pred HHHHHHhcCCCC
Q 009250 226 IITSLFLGIPAE 237 (539)
Q Consensus 226 ~~~~~~~~~~l~ 237 (539)
..+|..++.++.
T Consensus 192 nvLGY~~g~y~~ 203 (498)
T KOG0637|consen 192 NVLGYALGSYLG 203 (498)
T ss_pred ceeeeecccccC
Confidence 999999988554
No 209
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.03 E-value=2.1e-07 Score=89.56 Aligned_cols=378 Identities=11% Similarity=-0.009 Sum_probs=202.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
...++.+.++..++.-+.....+.+..+..-+ +-.-.+...-+-.+...+.++..|.+.||..|.+++..+.+.--++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~-sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPG-SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 45677788888888888888888777777431 22223333444455566788889999999999998887776643333
Q ss_pred HHHHh------h--h----cHHH---HHHHHHHhhhchhhh-hhhHHHHHHhcC------CCCccccchhhhHHHHHHHH
Q 009250 169 IISAQ------A--H----SLDE---MLWGRFLVGLGIGVN-TVLVPIYISEVA------PTKYRGSLGTLCQVGTCLGI 226 (539)
Q Consensus 169 ~~~~~------a--~----~~~~---l~~~r~l~G~~~~~~-~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~ 226 (539)
.+++. . + +-+. +++.-.+.|.-.-.. .....++=-||. +++.+.+.++.+.-.-.+..
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 32221 1 1 1112 122222222211111 111122223553 23345666777777777889
Q ss_pred HHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc-----ccchHHHHhcCChhHHHHHHHHHcCCcchHHHHHHHH
Q 009250 227 ITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT-----VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQ 301 (539)
Q Consensus 227 ~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (539)
+++|++.+.+....+ .+...++.+...++..+.=+++ ...|. +..+++.++.......- ....+.......
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~-L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 238 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFLLARVYNSVPA-LAVKKRSSESESSSDEE--SSSESSSDPSIL 238 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-hcCCCCCcccccccccc--ccccccchhhHH
Confidence 999999999988777 7777777777776665443322 12232 22222111111000000 000000000011
Q ss_pred HHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccc
Q 009250 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKY 381 (539)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 381 (539)
....+.-+.....|+..++.+.+...+...++++... .+......|+...|.++. ..+..-++..+.+..+
T Consensus 239 ~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVL-----sf~~lmt~yl~~~G~s~~-~igi~R~~gav~Gl~g--- 309 (432)
T PF06963_consen 239 KRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVL-----SFGGLMTAYLKSQGYSPS-VIGIFRGLGAVFGLLG--- 309 (432)
T ss_pred HHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHH---
Confidence 1111111122346777777776665555444444321 123344556666777765 5555555555555444
Q ss_pred hhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc---cccccccccccC
Q 009250 382 CALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG---PVTGLVIPELSS 458 (539)
Q Consensus 382 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p 458 (539)
.++..++.+|+|..+.-.++.....+.+.+.......+..+. .......++......=.|.+ ....-++.|..|
T Consensus 310 -T~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~--~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~ 386 (432)
T PF06963_consen 310 -TWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF--SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVP 386 (432)
T ss_pred -HHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCC
Confidence 999999999999888777776666555444444333321110 11111111111111112221 223456779999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHH
Q 009250 459 NRTRGKIMGFSFSVHWVCNFLVGLF 483 (539)
Q Consensus 459 ~~~~~~~~g~~~~~~~~g~~~~~~~ 483 (539)
+++||+..|+-+...++...+.-.+
T Consensus 387 ~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 387 ESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877655433
No 210
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=6.5e-09 Score=100.57 Aligned_cols=161 Identities=16% Similarity=0.092 Sum_probs=120.2
Q ss_pred cccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh---cHH--
Q 009250 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH---SLD-- 178 (539)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~-- 178 (539)
+........+-++-|+ +..++.+......+...+..+++..+.||+|||+.++.+..+..+..+++.... +..
T Consensus 287 ~ai~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~ 364 (485)
T KOG0569|consen 287 NAIFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGS 364 (485)
T ss_pred ceeHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444455677888888 777778999999999999999999999999999999999999998888877541 111
Q ss_pred ----HHHHHHHHhhhchhh-hhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHH
Q 009250 179 ----EMLWGRFLVGLGIGV-NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLP 253 (539)
Q Consensus 179 ----~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 253 (539)
..+++.++..++.+. ..|...-+.+|.+|++.|..++++.....-+...+-...-..+.+..|. +.|+...++
T Consensus 365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~ 442 (485)
T KOG0569|consen 365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIP 442 (485)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHH
Confidence 122333333332222 4678888999999999999999999888888877776666666666653 677777777
Q ss_pred HHHHHHHh-cccccch
Q 009250 254 GFILALGM-QFTVESP 268 (539)
Q Consensus 254 ~~~~~~~~-~~~~~~p 268 (539)
+++..+.. ..+||+.
T Consensus 443 ~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 443 LAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHhCcccC
Confidence 77666554 5588874
No 211
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.02 E-value=3.2e-09 Score=106.47 Aligned_cols=174 Identities=16% Similarity=0.052 Sum_probs=116.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHH-HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHH--------HH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF--------QI 159 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l--------~~ 159 (539)
++..++..+...+....+...+|.+ .+.+|. +..+.+++.++..++..++.++.|+++||+++|+.. ..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRV--SGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--ChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 4444555555555554545556655 456788 888889999999999999999999999998755221 11
Q ss_pred HHHHH--HHHHHHHHh-hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 160 DTIPL--ILGAIISAQ-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 160 ~~~~~--~~~~~~~~~-a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
+.... ++..++... ..+....+++-++.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 111111222 23444444455555555555555555555677665 799999999999999999999999988
Q ss_pred CCCc--chhHHHHHhhHHHHHHHHHHhcccc
Q 009250 237 EDDP--HWWRTMLYIASLPGFILALGMQFTV 265 (539)
Q Consensus 237 ~~~~--~~wr~~f~~~~~~~~~~~~~~~~~~ 265 (539)
.+.. +.|+..|++.++..++..++..++.
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 7643 3499999999888888776665544
No 212
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.01 E-value=3.1e-09 Score=119.13 Aligned_cols=143 Identities=20% Similarity=0.193 Sum_probs=121.4
Q ss_pred HHHHHHhCCCCCch-hhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhh
Q 009250 111 VSIAKELGFEGNPI-LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGL 189 (539)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 189 (539)
+.+.+++|. +.. +.+++.+.+.++..+++++.|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345567888 777 88999999999999999999999999999999999999999999888888899999999999999
Q ss_pred chhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC-cchhHHHHHhhHHHHHH
Q 009250 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWWRTMLYIASLPGFI 256 (539)
Q Consensus 190 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~~~ 256 (539)
+.+...+...+++.+..|+++||+++++.+....+|.++++.+++.+... .+ +...|++.+.+.++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLS-PAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888777665432 23 66666665554443
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.01 E-value=1e-08 Score=99.09 Aligned_cols=171 Identities=16% Similarity=0.228 Sum_probs=133.7
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhC-CCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELG-FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 169 (539)
...+..++.+.....+....+.+.+|.| . +....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~--~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~ 288 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGY--SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWL 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3334445556666666667777778877 5 555567777777788888889999999999999999999999999998
Q ss_pred HHHhh-hcHHHHHH----HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHH-HHHHHHHHHHHhcCCCCCCcch-
Q 009250 170 ISAQA-HSLDEMLW----GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQV-GTCLGIITSLFLGIPAEDDPHW- 242 (539)
Q Consensus 170 ~~~~a-~~~~~l~~----~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~~~~~l~~~~~~- 242 (539)
+.++. ++.+...+ ...+.|+..+..+.+...++.+..|++.|+++.++++. ..++|..+|..++|++.+..+.
T Consensus 289 l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 289 LYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 88887 55554433 34569999999999999999999999999999999875 5789999999999999887551
Q ss_pred ----hHHHHHhhHHHHHHHHHHhcc
Q 009250 243 ----WRTMLYIASLPGFILALGMQF 263 (539)
Q Consensus 243 ----wr~~f~~~~~~~~~~~~~~~~ 263 (539)
|...+.+.+.+.++..++..+
T Consensus 369 ~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 369 GMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 555666666666655554443
No 214
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.00 E-value=6.8e-09 Score=90.23 Aligned_cols=178 Identities=15% Similarity=0.118 Sum_probs=126.8
Q ss_pred CCCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHH
Q 009250 81 GWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQID 160 (539)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 160 (539)
.......++.++|..+.+..+-.-..++ ..+++.||+ |+...+-+.+.-..-.++.+++.|.++|++|++...+.+
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~ 336 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS 336 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH
Confidence 3444555666777666665544433332 357899999 888888888888888889999999999999999877765
Q ss_pred HHHH-HHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCC
Q 009250 161 TIPL-ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (539)
Q Consensus 161 ~~~~-~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 239 (539)
..+. .++-....| +++.=.++..+.|+.....-......++...|+++.|.+.+..+...++|..+.+++++.+.+.
T Consensus 337 a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 337 ACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 5444 333333333 3333355677888888877666777888899999999999999999999999999999999987
Q ss_pred cch--hHHHHH-hhHHHHHHHHHHhccc
Q 009250 240 PHW--WRTMLY-IASLPGFILALGMQFT 264 (539)
Q Consensus 240 ~~~--wr~~f~-~~~~~~~~~~~~~~~~ 264 (539)
.++ |--.|. +.+.+++....+.+.+
T Consensus 415 ~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 415 DGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 765 433443 4444444444444333
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00 E-value=2.8e-09 Score=118.97 Aligned_cols=148 Identities=16% Similarity=0.077 Sum_probs=119.7
Q ss_pred hhHHHHH-HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh------------
Q 009250 108 GPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA------------ 174 (539)
Q Consensus 108 ~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------ 174 (539)
..+|.+. +.+|. ++.+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 246 ~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 246 SQLPLLAKETLGG--DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHhHHHHHHHcCC--chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 3455554 45787 88889999999999999999999999999888877777777766666555543
Q ss_pred --------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009250 175 --------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (539)
Q Consensus 175 --------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~ 246 (539)
++.+.++++-++.|++.+...+...+++.+.+|+++||+++|+.++...+|..+++++++.+.....++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 677888889999999999999999999999999999999999999999999999999988876433226777
Q ss_pred HHhhHHHHHHH
Q 009250 247 LYIASLPGFIL 257 (539)
Q Consensus 247 f~~~~~~~~~~ 257 (539)
|++.++..++.
T Consensus 404 ~~~~~~~~~~~ 414 (1140)
T PRK06814 404 ILFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHHH
Confidence 66655544433
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.99 E-value=6.2e-09 Score=101.89 Aligned_cols=158 Identities=16% Similarity=0.086 Sum_probs=108.4
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
........|.+.++.+.+.. +.+.+.....+...++ ++..|++.||+|||+.+..+.++.+++.+++.....
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~-~~g~l~s~~~~g~~i~----~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~--- 90 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAF-QAALVQSAFYGGYFIM----AIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE--- 90 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---
Confidence 34445667888788877654 5556555555555444 999999999999999999999998888777543221
Q ss_pred CccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH----------
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET---------- 490 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~---------- 490 (539)
...........+..+.+.+. .+....++.+..|++++++..++.+....+|..++|.+.+.+...
T Consensus 91 ----~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 91 ----IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred ----hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 11222222233333333333 344456777888888899999999999999999999998877522
Q ss_pred ----------------hCcchhhHHHHHHHHHHHHhh
Q 009250 491 ----------------FGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 491 ----------------~g~~~~~~~~~~~~~~~~~~~ 511 (539)
.+|+.+|.+.+++.++..++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888887777666654443
No 217
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=3.3e-09 Score=96.34 Aligned_cols=110 Identities=19% Similarity=0.167 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh
Q 009250 363 LASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA 442 (539)
Q Consensus 363 ~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (539)
..+..+++.+++. ++.+|.++||+|||.++.++.+..++..++.+. ......+...=+..|..
T Consensus 72 flGSsF~ilQ~~s-------S~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~----------S~~F~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 72 FLGSSFSILQFIS-------SPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL----------SRNFAAFVLARFLGGIF 134 (451)
T ss_pred hHhhHHHHHHHHh-------hhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhhhhc
Confidence 4445555666665 999999999999999999999999887777766 33333333334555666
Q ss_pred cccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009250 443 IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 489 (539)
Q Consensus 443 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~ 489 (539)
-+...+..++++|++++++|+.+++..++...+|.++||.+.|++..
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 66666778999999999999999999999999999999999999887
No 218
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.97 E-value=1.8e-08 Score=98.73 Aligned_cols=189 Identities=16% Similarity=0.092 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhh----hcCCchhhH
Q 009250 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMD----KEGRQKLLI 400 (539)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d----r~g~r~~~~ 400 (539)
++++.........++. +.....+.+.+++..+.+.. ..+.+..+..+.+.+. .++.|+++| |+|||+.++
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~-~~~~i~~~~~l~~~i~----~Pi~G~lSDr~~sr~GRRrp~i 77 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGIPHA-WASIIWLCGPLSGLLV----QPLVGYLSDRCTSRFGRRRPFI 77 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HhHeeehhcCCCCCCCChHHHH
Confidence 3444445555555554 55566667778888888654 6666666666666555 999999999 599999877
Q ss_pred hh-HHHHHHHHHHHHHHhcCC----CC-ccchhhH--HHHHHHHHHHHHhcc-cccccccccccccCcccc--cchhhHH
Q 009250 401 GS-YLGMAISMLLVVGATSLP----LD-EDFSHNL--SILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTR--GKIMGFS 469 (539)
Q Consensus 401 ~~-~~~~~~~~~~~~~~~~~~----~~-~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~--~~~~g~~ 469 (539)
.+ .+...+++.++....... .. +...... ......+...-+... ..+...+++.|..|+++| +.+.++.
T Consensus 78 l~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~ 157 (477)
T TIGR01301 78 AAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHH
Confidence 64 455555555554422110 00 0000111 111111111111221 233456889999998765 5799999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHh-------------CcchhhHHHHHHHHHHHHhhheeeeCCC
Q 009250 470 FSVHWVCNFLVGLFFLDL--VETF-------------GVAPVYAGFGGVSLLSALFAYYFIVETK 519 (539)
Q Consensus 470 ~~~~~~g~~~~~~~~~~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (539)
+....+|+.+++.+.+.. .+.. +.+..|.+.+++.++..++..+..+|..
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999999999999988764 2222 3566788888888888888888888864
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.97 E-value=5e-08 Score=99.48 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=123.2
Q ss_pred hhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHHHHHHHHHHhhhc--------HH
Q 009250 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLILGAIISAQAHS--------LD 178 (539)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~--------~~ 178 (539)
.....+.+.+|. ++..+..+...+....-+..+++|.++|+ +|+++.++++.++..+|.++.+++.. ..
T Consensus 9 iLvlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~ 86 (654)
T TIGR00926 9 ILVLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHH
Confidence 344556667788 77777888888888888999999999996 79999999999999999988877521 23
Q ss_pred HHHHHHHHhhhchhhhhhhHHHHHHhcCCCCc---cccchhhhHHHHHHHHHHHHHhcCCCCCC-------cchhHHHHH
Q 009250 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDD-------PHWWRTMLY 248 (539)
Q Consensus 179 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~~wr~~f~ 248 (539)
..+++-.+..+|.|+.-+...+...|.+++++ |...+.++..+.++|.++++++..++.+. .+ |...|.
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF~ 165 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAFG 165 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHH
Confidence 36677888999999999999999999997643 66788888999999999998888777532 24 999999
Q ss_pred hhHHHHHHHHHHhc
Q 009250 249 IASLPGFILALGMQ 262 (539)
Q Consensus 249 ~~~~~~~~~~~~~~ 262 (539)
+.++..++..++..
T Consensus 166 i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 166 VPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 98888887765543
No 220
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.97 E-value=7.9e-09 Score=101.47 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=108.2
Q ss_pred HHHHHHhCCCCCchhhHHHHHHH-HHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH---Hhh-hcHHHHHHHH-
Q 009250 111 VSIAKELGFEGNPILEGLVVSIF-IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGR- 184 (539)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r- 184 (539)
+.+.+++|+ ++.+.+++.+.. .++..++.++.|++.||+|+|+.+..+.++..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 456677888 888889887665 45688999999999999999999888777766655443 344 4556555554
Q ss_pred ---HHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009250 185 ---FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (539)
Q Consensus 185 ---~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (539)
++.|++.+...+....++.+.+|.++ .++.+...++|..+++.+++.+.+..| |+..|.+.++++++.+++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 45556666667777777777777554 455666667888777778999999888 9999999998888776665
Q ss_pred ccc
Q 009250 262 QFT 264 (539)
Q Consensus 262 ~~~ 264 (539)
+..
T Consensus 387 ~~~ 389 (402)
T PRK11902 387 WLM 389 (402)
T ss_pred HHH
Confidence 443
No 221
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.94 E-value=1.4e-08 Score=98.06 Aligned_cols=162 Identities=14% Similarity=0.007 Sum_probs=106.5
Q ss_pred HHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhc-----CCchhh-HhhHHHHHHHHHHHHHHh
Q 009250 344 GVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKE-----GRQKLL-IGSYLGMAISMLLVVGAT 417 (539)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-----g~r~~~-~~~~~~~~~~~~~~~~~~ 417 (539)
......|.+.++.+.+.. +.+..... .+.. .+ .++.|+++||+ |||+.+ ..+.+..++....+.+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~-~~g~~~~~-~~~~----~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLK-TIGFFSLV-GLPY----SL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHH-HHHHHHHH-HHHH----HH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 344567888888888876 34443322 2222 01 78999999998 788864 555555555544544321
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----
Q 009250 418 SLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG----- 492 (539)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g----- 492 (539)
. ..+...+....+..........+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..|
T Consensus 79 ~------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 79 P------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred c------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 1 11222222222222222233345667888999999999999999999999999999999999988888
Q ss_pred ---cchhhHHHHHHHHHHHHhhheeeeCC
Q 009250 493 ---VAPVYAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 493 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
|+..|++.+++.++..+..++..+|.
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999888877777665544445554
No 222
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.94 E-value=5.4e-09 Score=103.87 Aligned_cols=153 Identities=18% Similarity=0.179 Sum_probs=101.2
Q ss_pred HHhHHHHHHHcCCChh-HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 346 LYFSSLTFQDVGITDG-ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 346 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
...++.+.++.|.++. .+......+...+. .++.|+++|.+|||+.++.+.++..++.++.....
T Consensus 64 a~~l~~I~~diG~~~~~~w~~~~~~l~~av~-------~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~------- 129 (599)
T PF06609_consen 64 ASILPYINADIGGSDNWSWFSTAWTLASAVS-------FPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ------- 129 (599)
T ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHH-------HHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC-------
Confidence 3345667777776643 23333333333333 88999999999999999999999999988877622
Q ss_pred chhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 504 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 504 (539)
+....+....+. +.+.+........++|..|.+.|+.+.++.....-....+++.+...+..+.+|++.|++.++..
T Consensus 130 -~~~~~iag~~l~--GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 130 -NMNTFIAGMVLY--GVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred -cHHHHHHHHHHH--HHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 222233333333 33344444445567899999999887776665544444566777766666678999999888877
Q ss_pred HHHHHhhheee
Q 009250 505 LLSALFAYYFI 515 (539)
Q Consensus 505 ~~~~~~~~~~~ 515 (539)
.++.++.+++.
T Consensus 207 ~i~~vl~~~fY 217 (599)
T PF06609_consen 207 GIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHh
Confidence 77665544443
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.94 E-value=1.4e-08 Score=96.11 Aligned_cols=161 Identities=28% Similarity=0.461 Sum_probs=130.5
Q ss_pred HHHhhhhhcccccchhHHHHHHHhCCCCCc--hhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHH
Q 009250 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (539)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (539)
...+...++........+.+..+++. +. .+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSL--SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 33344446667777788888888876 44 467999999999999999999999999999998888888777777788
Q ss_pred Hhhhc--HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCC-CccccchhhhHH-HHHHHHHHHHHhcCCCCCC--cchhHH
Q 009250 172 AQAHS--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQV-GTCLGIITSLFLGIPAEDD--PHWWRT 245 (539)
Q Consensus 172 ~~a~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~~~~~l~~~--~~~wr~ 245 (539)
++..+ .+.+++.|+++|++.+...+...+++.|++++ ++|+...+.... ...+|..+++.+++.+... .+ ||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 165 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRA 165 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHH
Confidence 77776 89999999999999999999999999999998 678888888888 5778888888777665543 33 999
Q ss_pred HHHhhHHHHHHH
Q 009250 246 MLYIASLPGFIL 257 (539)
Q Consensus 246 ~f~~~~~~~~~~ 257 (539)
.|.+........
T Consensus 166 ~~~~~~~~~~~~ 177 (338)
T COG0477 166 AFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHHH
Confidence 777666655444
No 224
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.92 E-value=1.1e-07 Score=86.41 Aligned_cols=355 Identities=14% Similarity=0.073 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHH--HHHhhhhhhhh-----hhcchHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAF--VGSISSGSLAD-----KLGCRRTFQI 159 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~g~l~d-----r~Grr~~l~~ 159 (539)
..+..+.+.+.+.+.-.+... .+|.+.+.=|. |-.+.+. |.+.+. .--+.|.++.| |+||||..++
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~v--Syt~~a~----fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGV--SYTSQAI----FSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCc--chhhhhh----hhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 346677777888888888888 89999886677 4433232 222222 33578889999 9999886554
Q ss_pred -HHHHHHHHHHHHHhh-----------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHH
Q 009250 160 -DTIPLILGAIISAQA-----------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII 227 (539)
Q Consensus 160 -~~~~~~~~~~~~~~a-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 227 (539)
+..+.+..+++.+.- ++...+...-++.-+..+.-..+.-.+.-....+++.|.+......+...|..
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 555555555554432 33444444556777777778888888888889999999888888888888887
Q ss_pred HHHHhcCCCCCC-------cc-----h---hHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcCCcc
Q 009250 228 TSLFLGIPAEDD-------PH-----W---WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESE 292 (539)
Q Consensus 228 ~~~~~~~~l~~~-------~~-----~---wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (539)
++..+--.+... .+ + -....++.+.+.++.-.++.+..+++...
T Consensus 184 L~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~--------------------- 242 (510)
T KOG3574|consen 184 LGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES--------------------- 242 (510)
T ss_pred hhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh---------------------
Confidence 776655444330 00 0 11122233333333333333333332100
Q ss_pred hHHHHHHHHHHHHhcCCCCc---chhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHH
Q 009250 293 INKAIEEFQLVIKKDGSDLD---SQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVG 369 (539)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (539)
..++.....+ ...+++++-+..+.........-. ++.......+.-+-+.|......+.+.
T Consensus 243 ----------~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~----gf~a~da~t~LkLle~Gv~ke~Lal~~-- 306 (510)
T KOG3574|consen 243 ----------VDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKL----GFQAADALTSLKLLEHGVPKEELALIA-- 306 (510)
T ss_pred ----------hhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHH----HhhhhhhccchHHHHcCCChhHheeee--
Confidence 0001111111 234555555554443333222222 233444455566667787766433332
Q ss_pred HHHhcccccccchhhhHHHHhhhcC--Cchh------hHhhHHHHHHHHHHHHHHhcCCC-CccchhhHHHHHHH--HHH
Q 009250 370 VTNFAGLRSEKYCALCASYLMDKEG--RQKL------LIGSYLGMAISMLLVVGATSLPL-DEDFSHNLSILGTL--FYI 438 (539)
Q Consensus 370 ~~~~~~~i~~~~~~~~~g~l~dr~g--~r~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~ 438 (539)
+..++. .++.++..-|+. .|++ +..-+....+...+....+.... +........++.++ .+.
T Consensus 307 v~~~pl-------qI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~ 379 (510)
T KOG3574|consen 307 VPLVPL-------QIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFH 379 (510)
T ss_pred eehhhH-------HHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHh
Confidence 333333 555555555542 2221 11111222222222222222221 11122222222221 122
Q ss_pred HHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009250 439 FTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 492 (539)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g 492 (539)
.++.........+..+.+.++..-|+-+.+.|+..++|+-.-..+..++.|..+
T Consensus 380 ~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 380 QVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred hhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 222222223345667789999999999999999999999888888888887643
No 225
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=4e-09 Score=95.25 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=98.0
Q ss_pred HHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCcccc
Q 009250 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS 213 (539)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 213 (539)
.+.-..|.++.+.+.||+|||+.+..+.+++++..++.-...+-....+.-|..-++..+.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34455789999999999999999999999999999988776543333333333333444567778889999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccch
Q 009250 214 LGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 214 ~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
..|..+...-+|.++.|+++-....+ -..+..+.+...++..+...++|-++
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~e~s---~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRAELS---TSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHhccc---eeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999998322222 23445556666666666666666443
No 226
>PRK09848 glucuronide transporter; Provisional
Probab=98.88 E-value=8.2e-09 Score=102.90 Aligned_cols=121 Identities=15% Similarity=0.090 Sum_probs=97.1
Q ss_pred HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh--cHHHHHHHHHHhhhchh
Q 009250 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGIG 192 (539)
Q Consensus 115 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~ 192 (539)
+.+|. ++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+
T Consensus 257 ~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 257 YVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred eecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 34554 555444545555677888999999999999999999999999888888777754 67777778889999999
Q ss_pred hhhhhHHHHHHhcCCCC-------ccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 193 VNTVLVPIYISEVAPTK-------YRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 193 ~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
...+...++..|..+.+ ++|...++.+....+|..+|+.+.+.+.
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988754 3588899999999999999887776543
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.87 E-value=1.4e-08 Score=100.51 Aligned_cols=146 Identities=20% Similarity=0.133 Sum_probs=119.9
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHH-hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 167 (539)
+..+.+..++..+.........+.+.++ +|. +...+.+..+..++..++.+++++++||+|+|+++..+.++.+++
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 4444555556666666666666666665 443 356688888999999999999999999999999999999999999
Q ss_pred HHHHHhhh--cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCC-------CccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 168 AIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 168 ~~~~~~a~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
.++..+.+ |.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+....+|..+++.+.+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 99999886 999999999999999999999999999999873 33478888888888888888887776553
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=98.87 E-value=1.1e-07 Score=95.25 Aligned_cols=164 Identities=13% Similarity=0.109 Sum_probs=104.3
Q ss_pred hHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC
Q 009250 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 421 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (539)
.+.+..+.+.+.++.+.+.. ..+.+..+....+ +..++.|++.||+|+|+++.++.++..++.++..+.....
T Consensus 43 ~y~fsv~s~~L~~~lgls~~-~l~~i~svg~~~g-----~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~- 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQR-DLSTITTVGIAVG-----YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV- 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHH-HHHHHHHHHHHHH-----HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 34556677888888888766 3333334333332 2266789999999999999999999999988877742100
Q ss_pred CccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH
Q 009250 422 DEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGF 500 (539)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~ 500 (539)
.....+.+.+.....+.+.+. .+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .++...|++.
T Consensus 116 ---i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l 190 (591)
T PTZ00207 116 ---IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFL 190 (591)
T ss_pred ---ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 011222222223333333222 2333445667787 569999999999999999875555555544 3566677777
Q ss_pred HHHHHHHHHhhheeeeC
Q 009250 501 GGVSLLSALFAYYFIVE 517 (539)
Q Consensus 501 ~~~~~~~~~~~~~~~~~ 517 (539)
+++.++..++.+.+++.
T Consensus 191 ~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 191 MSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHhheeC
Confidence 77777766666555543
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.86 E-value=1.4e-08 Score=104.31 Aligned_cols=176 Identities=14% Similarity=0.014 Sum_probs=113.4
Q ss_pred HHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHH
Q 009250 331 GALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISM 410 (539)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 410 (539)
..+..+.............+.+-++.+.+.. ..+.+.+...+...++ .++.+++.||.+||+.+.++.++.+++.
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~~iek~F~lss~-~~G~i~s~~~i~~~~~----~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLTTIERRFKLSTS-SSGLINGSYEIGNLLL----IIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhCCCCC-cceeeeehhhHHHHHH----HHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 3333443333334444455666666666554 4555555555554333 8999999999999999999999999998
Q ss_pred HHHHHHhcCCCC-----------------------c----------------cc--hhhHHHHHHHHHHHHHhcc-cccc
Q 009250 411 LLVVGATSLPLD-----------------------E----------------DF--SHNLSILGTLFYIFTFAIG-AGPV 448 (539)
Q Consensus 411 ~~~~~~~~~~~~-----------------------~----------------~~--~~~~~~~~~~~~~~~~~~~-~~~~ 448 (539)
+++.+....... . .. ......+.+.-+..+.+.+ ..+.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 887664211000 0 00 0012222222333333333 3466
Q ss_pred cccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh---------------------C-cchhhHHHHHHHHH
Q 009250 449 TGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF---------------------G-VAPVYAGFGGVSLL 506 (539)
Q Consensus 449 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~---------------------g-~~~~~~~~~~~~~~ 506 (539)
..+++.|.+|++.|+...|+.+....+|..+++.+.+.+.+.+ | |+..|++.+++.++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999999999887643 1 45557777766666
Q ss_pred HHHhh
Q 009250 507 SALFA 511 (539)
Q Consensus 507 ~~~~~ 511 (539)
..+..
T Consensus 273 ~~v~l 277 (633)
T TIGR00805 273 TSIPF 277 (633)
T ss_pred HHHHH
Confidence 55544
No 230
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.86 E-value=5.6e-09 Score=98.94 Aligned_cols=142 Identities=18% Similarity=0.096 Sum_probs=125.1
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHH
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~ 201 (539)
++...|.+.+...+.-++...+..++.+|+|.|+.++++..++.+=-+++++++|.+.+.+.+.+.|+-.+........+
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccccchhhh-HHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 202 ISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 202 i~~~~~~~~r~~~~~~~-~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
+++.+|+|..++...+. +.+.++|..+.+.++|.+.++.| .+..|++.+.+.++..++..+.
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheee
Confidence 99999999877777774 78899999999999999999998 9999999998887777666553
No 231
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.85 E-value=4e-09 Score=96.48 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH
Q 009250 362 ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF 441 (539)
Q Consensus 362 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (539)
...+++++.-.+...+. .++.|.+.||+|+|..+++|+..+..+.+++.+.. ..+..++.=.+-+.+.
T Consensus 106 ~~iG~LFaskA~~qllv----np~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--------sy~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLV----NPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--------SYPMLFVARSLQGVGS 173 (464)
T ss_pred cchhHHHHHHHHHHHHh----cccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--------hhHHHHHHHHHhhhhH
Confidence 35566665555554333 99999999999999999999999999999988832 1122222222333332
Q ss_pred hcccccccccccccccCccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 442 AIGAGPVTGLVIPELSSNRT-RGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 442 ~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
+. ......+++++.+|++. |++++|+...+..+|-.++|++.|.+++..|+..+|.+++.++++-.++.++.++.++.
T Consensus 174 A~-~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 174 AF-ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HH-HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 22 23445678889998764 79999999999999999999999999999999999999999999998887777765554
Q ss_pred CC
Q 009250 521 RS 522 (539)
Q Consensus 521 ~~ 522 (539)
++
T Consensus 253 ~~ 254 (464)
T KOG3764|consen 253 DP 254 (464)
T ss_pred Cc
Confidence 43
No 232
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.85 E-value=6.3e-06 Score=80.46 Aligned_cols=145 Identities=11% Similarity=-0.037 Sum_probs=103.8
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCC---CCchhhHHHHHHHHHHHHHH-HhhhhhhhhhhcchHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFE---GNPILEGLVVSIFIAGAFVG-SISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
++.+.+..|+..++.+ .+-.+.+.+.++ .+...+.++-+...+..++. .++.+++++|++|++++-+....+
T Consensus 9 ~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F 84 (472)
T TIGR00769 9 FLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPF 84 (472)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHH
Confidence 4444444444444443 345566776662 23456788888887777766 899999999999999998888888
Q ss_pred HHHHHHHHhh----h---------------------------cHHHHHHHHHHhhhchhhhhh-hHHHHHHhcCCCCccc
Q 009250 165 ILGAIISAQA----H---------------------------SLDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKYRG 212 (539)
Q Consensus 165 ~~~~~~~~~a----~---------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~ 212 (539)
....+++++. + +.|...+.-+...+-...... .-..+..|.++.+|-.
T Consensus 85 ~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qak 164 (472)
T TIGR00769 85 LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAK 164 (472)
T ss_pred HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 7777776665 1 122333334445554445554 6778899999999999
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 213 SLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 213 ~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
|..+++..+.++|.++++.+..++.
T Consensus 165 Rfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 165 RFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887765
No 233
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.84 E-value=7.1e-08 Score=92.26 Aligned_cols=158 Identities=14% Similarity=0.112 Sum_probs=109.6
Q ss_pred HHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCC
Q 009250 343 NGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLD 422 (539)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (539)
....+..|.+.++.+.+.....+.+.+.....-.+. .+..|+++||+|.|+++..+.+...+..+++++..
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~----qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~----- 113 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAV----LVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT----- 113 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHH----HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-----
Confidence 345566777888888887643666666655555433 99999999999999999999998888888887731
Q ss_pred ccchhhHHHHHHHHHHHHHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhh---HH
Q 009250 423 EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVY---AG 499 (539)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~---~~ 499 (539)
....+.+.=+..|.+-+.......++...+|+++|+++.|+.+....+|.++++++.+. ...+||+.-. .+
T Consensus 114 -----Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~I 187 (511)
T TIGR00806 114 -----SVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNII 187 (511)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHH
Confidence 22222222233333333322567888899999999999999999999999999999998 5567766533 33
Q ss_pred HHHHHHHHHHhhheeee
Q 009250 500 FGGVSLLSALFAYYFIV 516 (539)
Q Consensus 500 ~~~~~~~~~~~~~~~~~ 516 (539)
..+...++.++. +++|
T Consensus 188 sl~s~~~a~~~a-~~LP 203 (511)
T TIGR00806 188 SLVFMTFSVFLA-LFLK 203 (511)
T ss_pred HHHHHHHHHHHH-HhCC
Confidence 334444444433 4455
No 234
>PRK10133 L-fucose transporter; Provisional
Probab=98.84 E-value=3.1e-08 Score=97.97 Aligned_cols=141 Identities=11% Similarity=-0.038 Sum_probs=111.2
Q ss_pred HHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhh
Q 009250 114 AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGV 193 (539)
Q Consensus 114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 193 (539)
++.+|. ++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+.++.. .+..-++.|++.+.
T Consensus 287 ~~~~g~--s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGM--TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Confidence 456788 888999999999999999999999999999999999999888887777776666643 34567889999999
Q ss_pred hhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH
Q 009250 194 NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (539)
Q Consensus 194 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 259 (539)
.+|...+...+..+++ .+.+.++..+ ..+|..++|.+.+.+.+..++-|..|++..+..+..+.
T Consensus 364 i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 364 QYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999999998764 6777777764 44677777788777777654357777765555444433
No 235
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.76 E-value=5.1e-08 Score=92.71 Aligned_cols=124 Identities=12% Similarity=0.099 Sum_probs=93.7
Q ss_pred hhhHHHHhhhc-CCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc
Q 009250 383 ALCASYLMDKE-GRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR 460 (539)
Q Consensus 383 ~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~ 460 (539)
.+++||++||+ |+|+.+..+.+++.++.+++.... . .....+...+.....+.|. =+...+++.|++|++
T Consensus 78 ~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~-------~-~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~ 149 (498)
T COG3104 78 PIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-------V-SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKD 149 (498)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc-------c-ccccHHHHHHHHHHhccccccccHHHHHHHhcCCC
Confidence 78999999995 999999999999999999987721 0 1111222222222244444 366778888998853
Q ss_pred --cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 461 --TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 461 --~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
+|..++++.+...++|+.++|.+.+++.++.||...|.+.++-..++.+..++.
T Consensus 150 DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 150 DPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred CcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 578899999999999999999999999999999999988887777776655443
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.74 E-value=9.2e-07 Score=83.55 Aligned_cols=135 Identities=18% Similarity=0.060 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 206 (539)
+.+.-+-.+...+..+.+-+..+|...+.=+..+.+++.++.++.++++|.+.-+++-++.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44555666677777788888899988666667778889999999999999999999999999999988888887644 55
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccc
Q 009250 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVES 267 (539)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (539)
++ ...+.++.+.+.+.++|+..-..+.. .+ .-|..+++...+.++..+..+++.+.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 54 36788888888888888877655554 33 15777777777666565555554333
No 237
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=2.6e-07 Score=84.02 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=128.8
Q ss_pred cccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhh-cchHHHHHHHHHHHHHHHHHHhhhcHHHHHH
Q 009250 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (539)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 182 (539)
.+...-+|.+..|-|+ |+.+.|++.+...+.....++..-.+.+|. .+|+..+....++.++.+.+.+.+.-..+..
T Consensus 225 Y~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw 302 (395)
T COG2807 225 YIVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW 302 (395)
T ss_pred HHHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3344567999999999 999999999999999999999999999964 5778888888888888888888876554444
Q ss_pred HHHHhhhchhhhhhhHHHHHHhcCCCC-ccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009250 183 GRFLVGLGIGVNTVLVPIYISEVAPTK-YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (539)
Q Consensus 183 ~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (539)
-++.|+|.|..++.+...+.+..+.. +-++..++.+....+=..+||.+.|++.|..|+|+...+..+...++..+.-
T Consensus 303 -~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 303 -ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred -HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999888754 4456666677777777888999999999988889999988887777766555
Q ss_pred cc
Q 009250 262 QF 263 (539)
Q Consensus 262 ~~ 263 (539)
+.
T Consensus 382 l~ 383 (395)
T COG2807 382 LR 383 (395)
T ss_pred hh
Confidence 44
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.71 E-value=6.4e-08 Score=97.00 Aligned_cols=116 Identities=16% Similarity=0.043 Sum_probs=91.8
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHh-----hhcHHHHHHHHHHhhhchhhhhh
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ-----AHSLDEMLWGRFLVGLGIGVNTV 196 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~~~~~~~~ 196 (539)
+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4445677777777888999999999999999999999888877766665533 34567777788899999999999
Q ss_pred hHHHHHHhcCC-------CCccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 197 LVPIYISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 197 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
...++++|..+ .++.|..++......-+|..+++.+.+++.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999966 233455888888888888888887776654
No 239
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.68 E-value=8.3e-08 Score=68.20 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=74.4
Q ss_pred hhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHH
Q 009250 99 FGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLD 178 (539)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~ 178 (539)
.++.+..+.|.+|.+++|.++ |..+.||+.+..++||.+|.+...++.++..+++.+..+.+...+..+.+++.++.+
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 466778889999999999999 999999999999999999999999999999999999999999999999999998877
Q ss_pred HH
Q 009250 179 EM 180 (539)
Q Consensus 179 ~l 180 (539)
..
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 240
>PRK09669 putative symporter YagG; Provisional
Probab=98.65 E-value=3.9e-07 Score=90.75 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=88.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHh--hhcHHHHHHHHHHhhhchhhhhhhHHHHH
Q 009250 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPIYI 202 (539)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G~~~~~~~~~~~~~i 202 (539)
..+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777888889999999999999999999888776654443333 35677788888999999999999999999
Q ss_pred HhcCCC-------CccccchhhhHHHHHHHHHHHHHhcCCCCC
Q 009250 203 SEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 203 ~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 238 (539)
+|..+. +..|...+..+....+|..+|+.+++.+.+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998862 223556788888888888888888776543
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.64 E-value=3.8e-08 Score=93.66 Aligned_cols=164 Identities=18% Similarity=0.098 Sum_probs=138.6
Q ss_pred hhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhc
Q 009250 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS 176 (539)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 176 (539)
++.+.....+...+---.+|.+- .+...|.....-..|-.+.-++.+++..++|+-+++.+++.+..+=.+..++.+|
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n 458 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC
Confidence 33343333333344444566665 6666787888888888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009250 177 LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (539)
Q Consensus 177 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (539)
.|+.+...+++|+..+..+.+..+|+++..|++-|..+.++.+ ...++|-.+|.++|+.+....+ =|..|.+.++.++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAcl 537 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIACL 537 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999985 6678999999999999999988 8999999888887
Q ss_pred HHHHHhcc
Q 009250 256 ILALGMQF 263 (539)
Q Consensus 256 ~~~~~~~~ 263 (539)
+.+++...
T Consensus 538 ~~l~~~~~ 545 (618)
T KOG3762|consen 538 VTLALFIS 545 (618)
T ss_pred HHHHHHHH
Confidence 77655543
No 242
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.63 E-value=4.2e-07 Score=89.13 Aligned_cols=142 Identities=19% Similarity=0.218 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh
Q 009250 363 LASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA 442 (539)
Q Consensus 363 ~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (539)
.-+.+.+....+.+++ .+..|++.||+|-|+++..+.++.+++.++....... ..+ .+..+=+..|++
T Consensus 74 ~k~~i~ss~~~G~i~~----~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------~~~--~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILG----QIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------GFY--LLLVLRFLQGLG 141 (466)
T ss_pred HHHHHHHHHHHHHHHH----HcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------cch--hhHHHHHHhHHH
Confidence 4555666555555444 9999999999999999999999999998888875431 112 222333333333
Q ss_pred cc-cccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHhhheeee
Q 009250 443 IG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET-FGVAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 443 ~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
.+ ..|....+..+-.|+++|++..++.....++|.+++-++.|.+.+. .||+..|++.+++.++-.++.+++..
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 33 3567778888999999999999999999999999999999999998 99999999999999988877655554
No 243
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.54 E-value=3.8e-07 Score=81.95 Aligned_cols=357 Identities=15% Similarity=0.145 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 209 (539)
.-+..-.+.+.-++.=.+.|-.-.|++++.-.+......++.-+.++.+.+=+.-++.|...+ ...+-++++-+..+++
T Consensus 48 yPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~ 126 (433)
T KOG3810|consen 48 YPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPE 126 (433)
T ss_pred ccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHH
Confidence 345555667777788889999988999988888788888888899999999999999999876 6677788999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHc
Q 009250 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLW 288 (539)
Q Consensus 210 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 288 (539)
++.++.+...+..-.|...|..++..+..... .+...-.+......+..+...++|..+|-+.-+.+.++.. ..+..
T Consensus 127 ~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~--v~~~e 204 (433)
T KOG3810|consen 127 MYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS--VGDLE 204 (433)
T ss_pred HHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce--eccch
Confidence 99999999999999999999888887765443 1334444444444555566677776654333222222110 00000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcC-CChhHHHHHH
Q 009250 289 GESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG-ITDGALASLL 367 (539)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 367 (539)
..+. ..+..+. .+...........+..++|.. +-..+++....+++.-...|...+.++.. .......+..
T Consensus 205 ~~~~-~~~~~~~---l~~~~~~l~~~l~~~y~np~l----l~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~v 276 (433)
T KOG3810|consen 205 EMNP-QASYMSY---LRGAFVLLWRDLQECYSNPRL----LKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAV 276 (433)
T ss_pred hcCc-cchhhHH---HHHHHHHHHHHHHHHhcCchh----hhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHH
Confidence 0000 0000000 000000001122333444432 22334444455567777778777777663 2233445555
Q ss_pred HHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccc
Q 009250 368 VGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGP 447 (539)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (539)
=.+..+.|+++ .+..|++.-.+.|..-+.++..-...+.+++.... ..+.++......++...+.... +
T Consensus 277 eAv~tlLGa~~----~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~------t~~Iw~~Ya~yvlfr~~y~l~i-t 345 (433)
T KOG3810|consen 277 EAVSTLLGAIA----ALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ------TQHIWVCYAGYVLFRVIYQLTI-T 345 (433)
T ss_pred HHHHHHHHHHH----HHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc------ccceehhhhhHHHHHhhHhhhh-h
Confidence 55556666544 88888887666665433333322222222222211 1123333333333433333322 2
Q ss_pred ccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----------cchhhHHHHHHHHHHHHhh
Q 009250 448 VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-----------VAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 448 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g-----------~~~~~~~~~~~~~~~~~~~ 511 (539)
+....+++....+.-|..+|+..++.-+-..+-..+ +.|..| |..-|.+.+++.++.....
T Consensus 346 iA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 346 IATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred HHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 333445555667778999998877655444333322 334322 3334666676666665543
No 244
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.53 E-value=6.8e-07 Score=77.33 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=77.9
Q ss_pred cccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHH
Q 009250 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (539)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 183 (539)
-..+|.+-.+-++++. ...++|.+.-+.+-...+...+.|.++|+-|||+.-+.-++.+.++++ .-.++.|-.++++
T Consensus 54 WLQgPYvYyLYstYgF--gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVG 130 (454)
T KOG4332|consen 54 WLQGPYVYYLYSTYGF--GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVG 130 (454)
T ss_pred hhcCceeeeeehhcCc--cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeeh
Confidence 3445666666777888 667778877777777888899999999999999987666666655544 3357889999999
Q ss_pred HHHhhhchhhhhhhHHHHH-HhcC
Q 009250 184 RFLVGLGIGVNTVLVPIYI-SEVA 206 (539)
Q Consensus 184 r~l~G~~~~~~~~~~~~~i-~~~~ 206 (539)
|.+.|++.+..+.+.-++. .|..
T Consensus 131 R~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998887764 4544
No 245
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.50 E-value=2.1e-06 Score=76.25 Aligned_cols=143 Identities=10% Similarity=0.032 Sum_probs=97.1
Q ss_pred hhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHh
Q 009250 338 QFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 417 (539)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 417 (539)
..+..+.+..|.|.+.+..+.++. +...+.....++..+ .++.|.+.|++|.+.++.++.+...++...+....
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~-~l~~l~~~~~~G~~~-----G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQS-QLNTLSTAGDIGSYF-----GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHH-HHHHHHHHHHHHhhc-----cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 333456677899999999998876 444444445554432 58889999999999999999999999998887654
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009250 418 SLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~ 490 (539)
.-... ....+....+.+..+.+... .........+.+|. +||++.|+.-....+++++...+...+.+.
T Consensus 88 ~~~i~---~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 88 SGRIP---SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred hCccC---ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 32110 12333344444444433322 22222334477885 599999999999999999988888777654
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.50 E-value=3.1e-07 Score=91.52 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=118.1
Q ss_pred HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh----------hcHHHHHHHH
Q 009250 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA----------HSLDEMLWGR 184 (539)
Q Consensus 115 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----------~~~~~l~~~r 184 (539)
+.+|. ++.+.|++.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 45677 88899999999999999999999999999999999999999999888665321 3444555667
Q ss_pred HHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc----h--hHHH-HHhhHHHHHHH
Q 009250 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH----W--WRTM-LYIASLPGFIL 257 (539)
Q Consensus 185 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~----~--wr~~-f~~~~~~~~~~ 257 (539)
++.+++.+..+.....++.+..|++++|...++.++..++|..+++.+++.+.+..| . .++. ..+..+..++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999998887765433 0 2222 22333444444
Q ss_pred HHHhccccc
Q 009250 258 ALGMQFTVE 266 (539)
Q Consensus 258 ~~~~~~~~~ 266 (539)
+.+.+++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 444556774
No 247
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.49 E-value=5e-07 Score=92.01 Aligned_cols=123 Identities=20% Similarity=0.122 Sum_probs=93.9
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.++.|.++||+|||+++..+.++..++.+..++. .+.......=++.+.+..+.......+..|..++++|
T Consensus 135 ~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R 205 (521)
T KOG0255|consen 135 SLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQR 205 (521)
T ss_pred HhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh---------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchh
Confidence 9999999999999999999999999888777662 2223333333333333444456677888999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCC
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
+.+..+ ......++.+++...+++.. +|++.+++.....++..++ +++.+|.
T Consensus 206 ~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 206 GLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 999999 88888999999999998877 8888888877777766655 3444453
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.47 E-value=1e-06 Score=86.62 Aligned_cols=129 Identities=16% Similarity=0.185 Sum_probs=96.5
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.+.++.+.||++-.+.+....++.++..++-.. ..+...++++-++.+.+..+..|....++...+.+++|
T Consensus 98 ~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---------~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~ 168 (495)
T KOG2533|consen 98 QFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---------VHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSER 168 (495)
T ss_pred HhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---------HhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhh
Confidence 999999999999544444333333222222211 13344455555566666667778888899999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHH------HhCcchhhHHHHHHHHHHHHhhheeeeCCCC
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVE------TFGVAPVYAGFGGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (539)
+.-+|+.++...+|+++|+.+...+.+ ..||++.|++-+++.++.++++++++|+...
T Consensus 169 g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 169 GLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 999999999999999999999988643 4679999999999999999988888876543
No 249
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.45 E-value=1.9e-06 Score=84.12 Aligned_cols=128 Identities=19% Similarity=0.148 Sum_probs=102.7
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
++..|.++||+|||..+........+..+.+.+ ..++..+ .....+.........++++++....+.|
T Consensus 79 s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~----------~~~~~~~--~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 79 SPLIGALSDRYGRKVVLLLPLFGTILPALCLLF----------QGYWFFL--LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH----------HHHHHhh--hcccccchhhhhhhhhhheeeccchhHH
Confidence 899999999999999999888888877777766 2222222 2222222233345667889999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCC
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRS 522 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (539)
....|+.+.....+..++|.+.+.+....|+...+.+..+..++..+....++||+...+
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 999999999999999999999999999999999999999999999888888888875543
No 250
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.43 E-value=1.1e-05 Score=77.01 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=85.7
Q ss_pred HHHHHHHhhhhhcccccchhHHHHHHH--hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh-----hhcchHHHHH-HH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVSIAKE--LGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-----KLGCRRTFQI-DT 161 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~-~~ 161 (539)
.++.+.+++.+.-.+.....+|.+.++ -++ +-.|.+.. |.....+. .-++|.++.| |+||||..++ .-
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~f-Sla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q 78 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIF-SLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQ 78 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCC--ChhHheee-eeeechhH-HHHhhhhhhhhhcccccCCcchhhhHHH
Confidence 355667788888888877788888887 455 55554432 11111111 2345555555 8999987665 33
Q ss_pred HHHHHHHHHHHhhh----------------------c--HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhh
Q 009250 162 IPLILGAIISAQAH----------------------S--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTL 217 (539)
Q Consensus 162 ~~~~~~~~~~~~a~----------------------~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 217 (539)
.+.++..+..+..- + ...+...-++.=+-.+.-..+.-.+.-....+++++.+...
T Consensus 79 ~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 79 YLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred HHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 33344333333221 0 11223333334344455566666777777888889999888
Q ss_pred hHHHHHHHHHHHHHhcCCCC
Q 009250 218 CQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 218 ~~~~~~~G~~~~~~~~~~l~ 237 (539)
...+.+.|..++..+--.+.
T Consensus 159 qtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHhHhhhhHHHHHHHHHhhC
Confidence 88888888888876655444
No 251
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.43 E-value=2.2e-06 Score=82.51 Aligned_cols=145 Identities=17% Similarity=0.178 Sum_probs=108.8
Q ss_pred HHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 009250 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (539)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (539)
..++..++.....++.+.....+. ++.++.++....+.......+..++.+++.++.+|+|+|+++.++.++..++.++
T Consensus 240 ~~l~~~l~~~~~~~i~~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~ 318 (467)
T COG2211 240 LLLLMNLLLFIAFNIRGSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLL 318 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444433 3455557777778888888888888999999999999999999999999999999
Q ss_pred HHhhh--cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCC-------CccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 171 SAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 171 ~~~a~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
.-+.+ +.+.+++..++.++|.+...+...++++|..+- |.-|...+......=+|..++..+.++.
T Consensus 319 ~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 319 LYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred HHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98876 788888999999999999999999999887653 2236667777777777777776555443
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.40 E-value=7.3e-06 Score=66.95 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCC
Q 009250 128 LVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP 207 (539)
Q Consensus 128 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 207 (539)
.-.++......+++++.+.+.+++|.|+.+++|.+.+.+-.+.. +-++.+.++.+-++.|++.+..+++...++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34566667778888899999999999999999999998666554 56788899999999999999999999999999999
Q ss_pred CCccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 208 TKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 208 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
+++|++..+++......+.++|.++...+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888887665433
No 253
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.39 E-value=4.1e-07 Score=85.22 Aligned_cols=178 Identities=15% Similarity=0.027 Sum_probs=132.3
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhh------HHHHH-HHHHHHHHHHhhhhhhhhhhcchHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILE------GLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQI 159 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 159 (539)
+.++..+...|+.-......+.....+.++.++..+.... ..... +-..++..+-.+...+.|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4567777788887777777777888888888873322211 11111 1222333466677889999999999999
Q ss_pred HHHHHHHHHHHHHhhhcH--------HHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHH
Q 009250 160 DTIPLILGAIISAQAHSL--------DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~--------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 231 (539)
|.+++++..+..+...|. ....+..++.-+|- ......+-+|.+|.+-|+..-|+..+..-+|.++|..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC---CceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 999999999999988761 11222334443332 2334456689999999999999999999999999999
Q ss_pred hcCCCCC-----CcchhHHHHHhhHHHHHHHHHHhcccccch
Q 009250 232 LGIPAED-----DPHWWRTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 232 ~~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
.-.++.+ ..+ -|+.|++.+...++..+..+++||+.
T Consensus 461 ~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred HhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeeccc
Confidence 9888887 555 99999999999999999999999874
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.38 E-value=1.1e-06 Score=84.60 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHhcccccccchhhhHHHHhhhcCC-chhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHH
Q 009250 361 GALASLLVGVTNFAGLRSEKYCALCASYLMDKEGR-QKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIF 439 (539)
Q Consensus 361 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (539)
....+++.+...++.+++ .++.|+...|.+. |+.++.+.+++.++.++.......+ +.+.++..+.-+..
T Consensus 70 ~~ffG~viaa~slg~~i~----~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~-----~~~~y~mL~~R~l~ 140 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIF----SLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP-----NGVKYLMLVARILT 140 (488)
T ss_pred cchhhHHHHHHHHHHHhc----chhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc-----cchHHHHHHHHHHc
Confidence 346777777777666555 9999999999886 7888899999999998885544322 22455555555666
Q ss_pred HHhcccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH-------------hCcchhhHHHHHHHHH
Q 009250 440 TFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET-------------FGVAPVYAGFGGVSLL 506 (539)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~-------------~g~~~~~~~~~~~~~~ 506 (539)
|++.+.....-.|+++..-.+.|.++++..+....+|.++||.+...+... .-|..+-|+.+.+.++
T Consensus 141 Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~ 220 (488)
T KOG2325|consen 141 GVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWII 220 (488)
T ss_pred CcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHH
Confidence 666666677778888877777788999888887777888887665544321 1155677888888888
Q ss_pred HHHhhheeeeCCCC
Q 009250 507 SALFAYYFIVETKG 520 (539)
Q Consensus 507 ~~~~~~~~~~~~~~ 520 (539)
..++...+.+|..+
T Consensus 221 ~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 221 YIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHhheeeccc
Confidence 88877777776543
No 255
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=2.5e-06 Score=86.49 Aligned_cols=138 Identities=19% Similarity=0.157 Sum_probs=97.8
Q ss_pred HHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc
Q 009250 365 SLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG 444 (539)
Q Consensus 365 ~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (539)
..+.+...+.+.++ .++.|+++|++|||+.+.++.+...++.++..... ....+...=+..+++.|
T Consensus 92 s~~~s~~~lga~~g----~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~----------~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 92 GLLTSILNLGALVG----SLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP----------SWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHHhccchh
Confidence 44455555554444 99999999999999999999999999999888732 23333333333334333
Q ss_pred c-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--CcchhhHHHHHHHHHHHHhhheeeeCC
Q 009250 445 A-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF--GVAPVYAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 445 ~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
. ......+.+|..|++.||...+..+....+|..++ .+.+....+. +|+..+.+..+.+++..+. .++.||.
T Consensus 158 ~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 158 GASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred hhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 3 24455789999999999999999999998777766 6666665553 7887777777666666665 5666654
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.36 E-value=8.7e-09 Score=103.01 Aligned_cols=158 Identities=19% Similarity=0.087 Sum_probs=102.2
Q ss_pred cchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH--h--h-h-----
Q 009250 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q--A-H----- 175 (539)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a-~----- 175 (539)
.....+.+.+..+.+ .. -+......+...++.++...+.||+|||++++.+.++.+++.+..+ . . +
T Consensus 272 ~~~~~~~i~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 272 IFYYSPSIFENAGIS--NS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccc--cc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334456667777763 33 1222233344556777777999999999999999999888888775 1 1 1
Q ss_pred cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009250 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (539)
Q Consensus 176 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (539)
++..+.......-....+..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+ -...|++.+..++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCL 426 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHH
Confidence 122222222111111213456666788999999999999999999999999998888877776554 2344555555444
Q ss_pred HHH-HHhcccccch
Q 009250 256 ILA-LGMQFTVESP 268 (539)
Q Consensus 256 ~~~-~~~~~~~~~p 268 (539)
+.. +...++||+.
T Consensus 427 i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 427 IAIIFVYFFLPETK 440 (451)
T ss_pred HHHhheeEEEeeCC
Confidence 444 4556688873
No 257
>PRK11462 putative transporter; Provisional
Probab=98.33 E-value=1.3e-05 Score=79.99 Aligned_cols=114 Identities=15% Similarity=0.006 Sum_probs=75.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhc--HHHHHHHHHHhhhchhhhhhhHHH
Q 009250 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS--LDEMLWGRFLVGLGIGVNTVLVPI 200 (539)
Q Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~--~~~l~~~r~l~G~~~~~~~~~~~~ 200 (539)
+...+++.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.++ ...+++.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334467788888999999999999999999999887665555554444433322 334455567778887777777777
Q ss_pred HHHhcCCC-------CccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 201 YISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 201 ~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
++.|..+. ++-|..++......-+|..+++.+++.+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777662 2224445665566666766666555443
No 258
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.32 E-value=6e-06 Score=76.59 Aligned_cols=166 Identities=18% Similarity=0.162 Sum_probs=129.8
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHH-hCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 165 (539)
+.+....++.|+..-........++.+.+| .|+ ++.+.+...+.+..+..+|.++..++..|+...|.+.+..++..
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~--~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~i 313 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGL--NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAI 313 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 345555666666666666667777777777 566 88888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009250 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (539)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 245 (539)
+-++..+++++...+ .+-++.|+..+..+|...+...+..+ + .....+..-....+|..+-|.+-|++.+..+ -..
T Consensus 314 ll~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~~~ 389 (422)
T COG0738 314 LLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMFG-IQL 389 (422)
T ss_pred HHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhhh-hHH
Confidence 999999999995544 45678899999999999999999998 3 3444445556677888888999999999888 666
Q ss_pred HHHhhHHHHHHHH
Q 009250 246 MLYIASLPGFILA 258 (539)
Q Consensus 246 ~f~~~~~~~~~~~ 258 (539)
.+.....++.+..
T Consensus 390 ~~~~~pllc~lyV 402 (422)
T COG0738 390 TFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHH
Confidence 6664444444333
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.28 E-value=4.7e-05 Score=76.59 Aligned_cols=156 Identities=16% Similarity=0.120 Sum_probs=123.4
Q ss_pred cccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHHHHHHHHHHhhhcH-----
Q 009250 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLILGAIISAQAHSL----- 177 (539)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~----- 177 (539)
++....+..+.++++. +...+.-..+.+.-......+..+.++|- +||-+++.++.++..++..+..++...
T Consensus 55 g~~~nlv~ylt~~~~~--~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHA--SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred cchhHHHHHHHHHhcc--chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 4456777889999998 55666777888888888889999999997 589899999999988886655543211
Q ss_pred --------------------HHHHHHHHHhhhchhhhhhhHHHHHHhcCC---CCc---cccchhhhHHHHHHHHHHHHH
Q 009250 178 --------------------DEMLWGRFLVGLGIGVNTVLVPIYISEVAP---TKY---RGSLGTLCQVGTCLGIITSLF 231 (539)
Q Consensus 178 --------------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~G~~~~~~ 231 (539)
..++.+.-+..+|.|+.-+...++-+|-++ +++ +...+.++....++|..++..
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 246667778888999999999999999998 322 246788889999999999999
Q ss_pred hcCCCCCCcchhHHHHHhhHHHHHHHHHHhc
Q 009250 232 LGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (539)
Q Consensus 232 ~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 262 (539)
+-.+..++.+ |.+-|.+..+..+++.++.+
T Consensus 213 ~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 213 VLVYIQDNVG-WKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHhhhhccc-ceeeccHHHHHHHHHHHHHH
Confidence 9888877777 99999988877776655443
No 260
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.26 E-value=2.9e-05 Score=72.83 Aligned_cols=149 Identities=17% Similarity=0.146 Sum_probs=122.8
Q ss_pred HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh-hhcchHHHHHHHHHHHHHHHHHHh---hhcHHHHHHHHHH
Q 009250 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-KLGCRRTFQIDTIPLILGAIISAQ---AHSLDEMLWGRFL 186 (539)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l 186 (539)
|+=.+-||+ +..+...+...+..|..++....|++.. |.++|+.-.+++.+..++..+..+ ..+.+.+...-++
T Consensus 233 Pygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 444566888 8888899999999999999999999877 678888888888888777666544 4678889999999
Q ss_pred hhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC---------CcchhHHHHHhhHHHHHHH
Q 009250 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---------DPHWWRTMLYIASLPGFIL 257 (539)
Q Consensus 187 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---------~~~~wr~~f~~~~~~~~~~ 257 (539)
.|++.|.......+...|...+++.|.++|.|.....+...++..+|+.+.| ...+|-.+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888876543 1223778888887777766
Q ss_pred HHHh
Q 009250 258 ALGM 261 (539)
Q Consensus 258 ~~~~ 261 (539)
+.+.
T Consensus 391 ~~ll 394 (403)
T PF03209_consen 391 LVLL 394 (403)
T ss_pred HHHH
Confidence 6544
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.16 E-value=7.6e-06 Score=57.96 Aligned_cols=70 Identities=23% Similarity=0.312 Sum_probs=58.5
Q ss_pred HHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
...+++.....+...|.+|...++.|+ ++.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 334455555667777888888888899 9999999999999999999999999999999998887766554
No 262
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.05 E-value=6.3e-05 Score=72.90 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-c------HHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC---ccccchhhhHHHH
Q 009250 155 RTFQIDTIPLILGAIISAQA--H-S------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK---YRGSLGTLCQVGT 222 (539)
Q Consensus 155 ~~l~~~~~~~~~~~~~~~~a--~-~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 222 (539)
|+++++.++..+|.++..++ + + .+.++++-++.++|.|+.-|...++++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57888999999999985443 2 2 267899999999999999999999999999876 3567888999999
Q ss_pred HHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc
Q 009250 223 CLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (539)
Q Consensus 223 ~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (539)
++|..++..+.+++.++.+ |.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999998888 999999999888877665544
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.01 E-value=0.0011 Score=62.52 Aligned_cols=167 Identities=11% Similarity=-0.077 Sum_probs=80.9
Q ss_pred hhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhh----hhhhhhhcchHHHHHHHHHHHHHHHHHH
Q 009250 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISS----GSLADKLGCRRTFQIDTIPLILGAIISA 172 (539)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 172 (539)
+-.-+..+.+....+++.+++-.... .......+.+...+..++. ..+.-|. |+++.....+...+..+.+.
T Consensus 28 iG~LlpWN~fiTa~~y~~~~~~~~~~---~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~ 103 (406)
T KOG1479|consen 28 IGTLLPWNMFITASDYYYYRFPGYHN---SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLD 103 (406)
T ss_pred cccccchHhhhccHHHHHhhcCCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 33344566666777888877754222 2334444444444444444 4444442 11221111111222222222
Q ss_pred hh---------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009250 173 QA---------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (539)
Q Consensus 173 ~a---------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 243 (539)
++ ..+...++.-.+.|++.|..........++ +|++.-+..++=.+.++.+-.++.-.......+...+=
T Consensus 104 ~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA 182 (406)
T KOG1479|consen 104 LALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSA 182 (406)
T ss_pred HHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCcee
Confidence 22 346667777888888888777777766555 46564333333223333333333333333333332223
Q ss_pred HHHHHhhHHHHHHHHHHhcccccch
Q 009250 244 RTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
...|.+..++.+++.++...+++.|
T Consensus 183 ~~yF~~s~~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 183 LIYFITSTVILLLCFVLYLVLPKLP 207 (406)
T ss_pred ehhHHHHHHHHHHHHHHHHHhhcch
Confidence 3445555666666666666666665
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.99 E-value=0.0018 Score=63.94 Aligned_cols=149 Identities=15% Similarity=0.065 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCC-CCchhhHHHHHHHHH-HHHHHHhhhhhhhhhhcchHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTIP 163 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 163 (539)
++.++.+.+..|+..++.++. -.+.+.+=++ .++..+.++-....+ ...+...+..+++++++|.+++-+....
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 334555555556655555332 2222222110 133344555554444 3345677899999999999998887777
Q ss_pred HHHHHHHHHhh---------hc----------------------HHHHHHHHHHhhhchhhhhh-hHHHHHHhcCCCCcc
Q 009250 164 LILGAIISAQA---------HS----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKYR 211 (539)
Q Consensus 164 ~~~~~~~~~~a---------~~----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 211 (539)
+.....++++. ++ .|.+.+.-++.-+-.....+ .-..+..|.++.+|-
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 77666666653 11 11122222222232233333 356788999999999
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCCCCC
Q 009250 212 GSLGTLCQVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 212 ~~~~~~~~~~~~~G~~~~~~~~~~l~~ 238 (539)
.|..+++..+.++|.++++.+..++.+
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888777766
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.98 E-value=0.0032 Score=60.47 Aligned_cols=173 Identities=12% Similarity=0.008 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHHHHhCCC-CCchhhHHHHHHHHH-HHHHHHhhhhhhhhhhcchHHHHHHHHHH
Q 009250 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
..+.-+.+..++..++.+ .+-.+.+.+.++ .++..+.++-+.+-+ +..+..++.+++.+++.+.+++-+.+..+
T Consensus 27 ~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F 102 (509)
T COG3202 27 KKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFF 102 (509)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 334444444455555543 344556666553 355566788887777 66788999999999999999998888888
Q ss_pred HHHHHHHHhh---------hc-----------------------HHHHHHHHHHhhhchhhhhh-hHHHHHHhcCCCCcc
Q 009250 165 ILGAIISAQA---------HS-----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKYR 211 (539)
Q Consensus 165 ~~~~~~~~~a---------~~-----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 211 (539)
....+++++. ++ .|...+.-.+.-+-...... .-.....|....+|-
T Consensus 103 ~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ea 182 (509)
T COG3202 103 LGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEA 182 (509)
T ss_pred HHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 8888877764 11 02222222222222222222 445667888998999
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCCCCCCcch---------hHHHHHhhHHHHHHHHHHhcc
Q 009250 212 GSLGTLCQVGTCLGIITSLFLGIPAEDDPHW---------WRTMLYIASLPGFILALGMQF 263 (539)
Q Consensus 212 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~---------wr~~f~~~~~~~~~~~~~~~~ 263 (539)
.|..++++.+.+++..++..+..++.++... -+..+.+.++.+++++.+..+
T Consensus 183 kRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~ 243 (509)
T COG3202 183 KRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRY 243 (509)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888774432 333444444444444444433
No 266
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.96 E-value=0.00033 Score=64.79 Aligned_cols=159 Identities=13% Similarity=0.075 Sum_probs=89.8
Q ss_pred hHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchh
Q 009250 348 FSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSH 427 (539)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (539)
|.-.+.++.++... +...++..+.....+. ..+.|.++||+|||+.-+...++..++++..-. .+.
T Consensus 56 Y~Y~LY~~yg~~~~-qIa~Lf~~Gf~Ss~i~----g~~~G~laD~~Grk~~cl~~cily~~scl~k~~---------~~~ 121 (354)
T PF05631_consen 56 YLYALYESYGFSEH-QIAILFVAGFASSAIF----GTFVGSLADRYGRKKACLLFCILYSLSCLTKHS---------SNY 121 (354)
T ss_pred hhHHHHHHcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc---------ccc
Confidence 33344567777765 4445555555544333 889999999999999888888888887765432 011
Q ss_pred hHHHHHHHHHHHHHhccccccccccccc----ccCcccccchhhHHHHH-HHHHHHHHHHHHHHHHHHhCc--chhhHHH
Q 009250 428 NLSILGTLFYIFTFAIGAGPVTGLVIPE----LSSNRTRGKIMGFSFSV-HWVCNFLVGLFFLDLVETFGV--APVYAGF 500 (539)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~l~~~~g~--~~~~~~~ 500 (539)
...++.-++.+.....-....-.-++.| -+|++..+..++..... +.+..+.+..+...+.+..|. ..+|...
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a 201 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAA 201 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHH
Confidence 2222222222222221111111122333 34555455555554423 334455566666666776654 7788888
Q ss_pred HHHHHHHHHhhheeeeCCCC
Q 009250 501 GGVSLLSALFAYYFIVETKG 520 (539)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~ 520 (539)
..+++++.++.....+|..+
T Consensus 202 ~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 202 IVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHHHHhcccccCC
Confidence 88888877776656666544
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.94 E-value=0.00025 Score=72.87 Aligned_cols=129 Identities=11% Similarity=0.054 Sum_probs=85.4
Q ss_pred hhhHHHHhhh-cCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcc
Q 009250 383 ALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNR 460 (539)
Q Consensus 383 ~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~ 460 (539)
.+++|+++|+ +|+++.+.++.++..++..++.+... +...+... .......+.....+.+ +-|...+...|.++++
T Consensus 40 pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~~~~~~-~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 40 PLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSSGHPLH-DLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-cccccchH-HHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 7889999996 69999999999988888877765321 11000111 1112222222333333 3466667777777643
Q ss_pred ---cccchhhHHHHHHHHHHHHHHHHHHHHHHHh-------CcchhhHHHHHHHHHHHHhhhe
Q 009250 461 ---TRGKIMGFSFSVHWVCNFLVGLFFLDLVETF-------GVAPVYAGFGGVSLLSALFAYY 513 (539)
Q Consensus 461 ---~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~ 513 (539)
.+...+.+.+...++|+.+++.+.+++.+.. +|...|.+.+++.+++.++...
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3677888888999999999999999887553 5777888777777777665443
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.76 E-value=0.0011 Score=64.99 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=32.9
Q ss_pred HHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 436 FYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 436 ~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
.+.+++..|+ ......+..+..++++|..+..+...+..+|-.+|..+.
T Consensus 379 ~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 379 MLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555544 345556677778888888888888777777777776553
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.59 E-value=0.00077 Score=66.46 Aligned_cols=157 Identities=19% Similarity=0.269 Sum_probs=98.3
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcC-----CchhhHhhHHHHHHHHHHHHHHhcCCCCcc
Q 009250 350 SLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEG-----RQKLLIGSYLGMAISMLLVVGATSLPLDED 424 (539)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (539)
+++.++.+.+.. .......+..++-. ..++.|.++|-+. ||..++++.++..++.+.+......
T Consensus 14 ~~l~~~l~ls~~-~~~~~~~~~~lPw~-----~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~----- 82 (433)
T PF03092_consen 14 PFLKDDLGLSPA-QLQRLSSLASLPWS-----IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS----- 82 (433)
T ss_pred HHHHHHcCCCHH-HHHHHHHHHhCchH-----HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-----
Confidence 445566777665 44455555555441 2789999999863 4555666666665555555553321
Q ss_pred chhhHHHHHHHHHHHHHhcccc-cccccccccccC--cccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Q 009250 425 FSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSS--NRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFG 501 (539)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p--~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 501 (539)
.........+++...++.... ...-+...|... ++.+|...+.......+|++++..+.|.+.+..+++..|.+.+
T Consensus 83 -~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 83 -ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred -cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHH
Confidence 112222222223333332222 233455556553 2237788888888999999999999999999999999998888
Q ss_pred HHHHHHHHhhheeeeCC
Q 009250 502 GVSLLSALFAYYFIVET 518 (539)
Q Consensus 502 ~~~~~~~~~~~~~~~~~ 518 (539)
.+..+..+..+.+.+|+
T Consensus 162 ~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 162 ALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHHHHHHHHhhhhc
Confidence 87777766666666653
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.46 E-value=0.0024 Score=56.17 Aligned_cols=55 Identities=20% Similarity=0.167 Sum_probs=38.4
Q ss_pred CccccchhhhHHHHHHHHHHHHHhcCCCCC-----CcchhHHHHHhhHHHHHHHHHHhccc
Q 009250 209 KYRGSLGTLCQVGTCLGIITSLFLGIPAED-----DPHWWRTMLYIASLPGFILALGMQFT 264 (539)
Q Consensus 209 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (539)
|+|+....+...+.++|.++....--...+ ..+ |++++.+.+++.++-+++...+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~-W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNN-WQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 678888888889999998887544222211 223 9999999988887776655544
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.38 E-value=0.00046 Score=65.61 Aligned_cols=141 Identities=18% Similarity=0.112 Sum_probs=93.6
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH--H-
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL--I- 165 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~--~- 165 (539)
++-+.+.++..++....+.+.+.. ..++.- ...+..+...+|.+|..++.--...+ |+ |++.+...+-. .
T Consensus 249 miPL~lVY~aEY~InqGv~~tl~f-p~~~~~--~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~ 321 (402)
T PF02487_consen 249 MIPLFLVYFAEYFINQGVAPTLLF-PNSFFS--PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLV 321 (402)
T ss_pred HHHHHHHHHHHHHHHhchHHHhcC-CccCCC--HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHH
Confidence 334455555555554444333311 111221 34566788888888877764432221 33 33333332222 2
Q ss_pred --HHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCC
Q 009250 166 --LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (539)
Q Consensus 166 --~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 236 (539)
+.....-+.++.|.+++.-+..|+..|..++.....+.|-.++++|-.+++..+.+-++|..++.+++..+
T Consensus 322 ~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 322 FLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 22223335689999999999999999999999999999999999999999999999999999999888654
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.26 E-value=0.0015 Score=46.30 Aligned_cols=64 Identities=19% Similarity=0.299 Sum_probs=48.6
Q ss_pred hhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHH
Q 009250 337 QQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLG 405 (539)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 405 (539)
..++......-|.+.++++.|.+.. +.+.+.++..+...++ .+++|+++||.++++........
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~-~iGil~~i~~~~~~~~----~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPS-QIGILSAIRPLIRFLA----PPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHCccHHHHHHHHH
Confidence 3344566677788899998888766 7777777777776555 99999999999999877655443
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.14 E-value=0.0061 Score=57.99 Aligned_cols=117 Identities=13% Similarity=-0.030 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh
Q 009250 363 LASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA 442 (539)
Q Consensus 363 ~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (539)
+...++.+..+.. .+.+-|+.||+|-|....++..+..++..+=.....-. .++...- .+...+....
T Consensus 83 wlsmIym~v~vp~-------gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~----v~~~f~~-~l~~~Gq~ia 150 (480)
T KOG2563|consen 83 WLSMIYMVVSVPF-------GFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPF----VPPLFRR-PLTHTGQSIA 150 (480)
T ss_pred HHHHHHHHHHHHH-------hhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcc----ccccchh-hhhHHhHHHH
Confidence 4455555666655 88999999999999999999999988877665532210 1111111 1111111111
Q ss_pred ccccccc----ccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009250 443 IGAGPVT----GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 491 (539)
Q Consensus 443 ~~~~~~~----~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~ 491 (539)
....+.. .-...--+|+++|+++..+..+...+|.+++-.+-..+..+.
T Consensus 151 a~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 151 AAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 1111111 122334588999999999999998899988887777666443
No 274
>PRK03612 spermidine synthase; Provisional
Probab=97.14 E-value=0.013 Score=59.08 Aligned_cols=135 Identities=19% Similarity=0.021 Sum_probs=80.8
Q ss_pred HHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHH-HHHHHH-HHHHHH----HhhhcH-HHHHHHHHHh
Q 009250 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLI-LGAIIS----AQAHSL-DEMLWGRFLV 187 (539)
Q Consensus 115 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~-~~~~~~----~~a~~~-~~l~~~r~l~ 187 (539)
--+|- +..+.+.+.+++++|.++|+.+.+++.++--++...+- +..+.+ ++..+. ++...+ ..++..-++.
T Consensus 43 ~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 43 YLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455 77788999999999999999999988744333322111 111111 111111 111111 1223445677
Q ss_pred hhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC-CcchhHHHHHhhHH
Q 009250 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DPHWWRTMLYIASL 252 (539)
Q Consensus 188 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~~wr~~f~~~~~ 252 (539)
|+..|+..|....+..+... ++-+...|-......+|.++|.++.+++.- ..|..+..+++.++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 88888888887777665432 234567788888889999999888776543 45535555544433
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.06 E-value=0.014 Score=47.95 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=64.1
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.++.+.+.+++|.|+.+.++.+...+-...... + ..+..+....+.+.+.+. .+.....++.+...++.+
T Consensus 54 ~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-~--------~~~~l~~~s~l~G~~~a~-lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 54 CLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-P--------NSYTLYPASALLGFGAAL-LWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-h--------hHHHHHHHHHHHhhhhHH-hhHhhhHHHHHcCCHHHH
Confidence 788889999999999999988877755544432 0 222223333333333332 344445677788888889
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHH
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDL 487 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l 487 (539)
++..|+...+.+.+.++|..+.-.+
T Consensus 124 ~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888877665544
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.02 E-value=0.018 Score=56.03 Aligned_cols=149 Identities=19% Similarity=0.160 Sum_probs=108.3
Q ss_pred HHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 168 (539)
.+...++..+.+++.-.+......+...-|+ ++..+|..-+...+....+.+...++.+|+|..+.=+++...-.+..
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 4444555555555544456666666666688 99999999999999999999999999999999888777766544433
Q ss_pred HHHHh---h---h----cHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCC
Q 009250 169 IISAQ---A---H----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (539)
Q Consensus 169 ~~~~~---a---~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 238 (539)
.++.. . + +...++.+-.+.=+|.=....+..-++.|..|+++||...|.-....++--++...++-.+.+
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 33332 2 2 233344444555555556777888899999999999999999999888888888877765554
Q ss_pred C
Q 009250 239 D 239 (539)
Q Consensus 239 ~ 239 (539)
.
T Consensus 418 P 418 (432)
T PF06963_consen 418 P 418 (432)
T ss_pred h
Confidence 3
No 277
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.16 Score=49.58 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHhhhhhhhh---hhcchHHHHHHHHHHHHHHHHHHhh------------------hcHHHHHHHHHHhh
Q 009250 130 VSIFIAGAFVGSISSGSLAD---KLGCRRTFQIDTIPLILGAIISAQA------------------HSLDEMLWGRFLVG 188 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~a------------------~~~~~l~~~r~l~G 188 (539)
.-.-.+|..+++.+.+.+++ ++||++.+.++.++..++.++.-.. +++...++.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 33344444455555666664 5899999999999988888877653 24566778889999
Q ss_pred hchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC
Q 009250 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 235 (539)
++-+......+.++.+.+ +++|..+.++.-.-..++..++......
T Consensus 365 ~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred hHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999 4558888888888788877776555443
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.43 E-value=0.063 Score=52.99 Aligned_cols=106 Identities=8% Similarity=-0.094 Sum_probs=69.4
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccc-----------------h------hhHHHHHHHHHHH
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF-----------------S------HNLSILGTLFYIF 439 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~------~~~~~~~~~~~~~ 439 (539)
.++.+++++|++|++++..........++++.+... +..+.. . ..+......+..-
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~e 139 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY-PLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAE 139 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh-cchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHH
Confidence 677899999999999877766666655555554421 100000 0 0111111222222
Q ss_pred HHhccccc-ccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009250 440 TFAIGAGP-VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 489 (539)
Q Consensus 440 ~~~~~~~~-~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~ 489 (539)
.++....+ +.+...+|.+..++..+-.++....+++|..+++.+..++.+
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22332333 677889999999999999999999999999999999888763
No 279
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.11 E-value=0.019 Score=55.67 Aligned_cols=117 Identities=9% Similarity=0.023 Sum_probs=75.5
Q ss_pred hhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc---cccchhhHHHHH
Q 009250 397 KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR---TRGKIMGFSFSV 472 (539)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~---~~~~~~g~~~~~ 472 (539)
+.+.++.++..++.+++.+.......++ ......+...+...+.+.|. =|...++..|.++++ .+.+.+..++..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~-~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPS-GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhh-hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 4567788888888888655443221111 11112222222233333333 366777788888765 466777888999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhhee
Q 009250 473 HWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 514 (539)
Q Consensus 473 ~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (539)
.++|..++..+.+++.++.||...|.+.++..+++.+..+.-
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999888888877765443
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.91 E-value=0.0018 Score=60.75 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=2.4
Q ss_pred HHHHHHHHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 433 GTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 433 ~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
.+..+.+++..|+ ......+..+..++++|..+..+......+|-.+|..+.
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---------------HHHH----------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555555 455666777888888888887777777777776666543
No 281
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.87 E-value=0.0023 Score=64.64 Aligned_cols=162 Identities=16% Similarity=0.074 Sum_probs=1.2
Q ss_pred HhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCc---
Q 009250 347 YFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDE--- 423 (539)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 423 (539)
...+.+-++++.++. ..+.+.+...+...+. .++..++.+|..|-+.+..+.++++++.+++.+-.......
T Consensus 24 ~~lttiErRF~l~S~-~~G~i~s~~di~~~~~----~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 24 SSLTTIERRFGLSSS-QSGLISSSYDIGSLVV----VLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 334444455555444 7777777777777555 67777888887777888888888888888776532211000
Q ss_pred -----------------------------------cchhhHHHHHHHHHHHHHhccc---ccccccccccccCcccccch
Q 009250 424 -----------------------------------DFSHNLSILGTLFYIFTFAIGA---GPVTGLVIPELSSNRTRGKI 465 (539)
Q Consensus 424 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~ 465 (539)
....+.....+++.....++|. .++..+|+.|..+++..+..
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccc
Confidence 0011111222222222333333 45666889999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---------------------hC-cchhhHHHHHHHHHHHHhhhe
Q 009250 466 MGFSFSVHWVCNFLVGLFFLDLVET---------------------FG-VAPVYAGFGGVSLLSALFAYY 513 (539)
Q Consensus 466 ~g~~~~~~~~g~~~~~~~~~~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~ 513 (539)
.|+...+..+|-++|-.+.+..... .| |...|++.+.+.++..+....
T Consensus 179 iGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 179 IGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp ----------------------------------------------------------------------
T ss_pred hhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999888888777766654421 12 445566666666665554433
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.85 E-value=0.091 Score=50.42 Aligned_cols=123 Identities=22% Similarity=0.120 Sum_probs=75.4
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcccc
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTR 462 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 462 (539)
.+....+.|.++.|++++++.+...+...++.+.. ......+.-++. +.....-...++++=...|+++-
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--------sv~~mq~~q~~y--g~~~a~evay~sYiys~v~~~~y 127 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--------SVLAMQLMQFFY--GLATAAEVAYYSYIYSVVDKEHY 127 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--------cHHHHHHHHHHH--HHHHHHHHHHHHHheeecCHHHH
Confidence 66777899999999999988888777777766521 112222222222 22222233444556566677777
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhC--cchhhHHHHHHHHHHHHhhheeee
Q 009250 463 GKIMGFSFSVHWVCNFLVGLFFLDLVETFG--VAPVYAGFGGVSLLSALFAYYFIV 516 (539)
Q Consensus 463 ~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~ 516 (539)
-++.+......-+|.+++..++-.+....+ +.....+..+...++.++. +++|
T Consensus 128 q~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~-~fLP 182 (412)
T PF01770_consen 128 QKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIA-LFLP 182 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHcC
Confidence 888998888888888888888776666433 3333344444444444433 3344
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.82 E-value=0.12 Score=53.21 Aligned_cols=165 Identities=15% Similarity=0.094 Sum_probs=101.2
Q ss_pred hHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCC------
Q 009250 348 FSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL------ 421 (539)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~------ 421 (539)
..+.+-+.++..+. ..+++.+...+...+. .....+...|..|-+++-+|.++++++.++..+-..+..
T Consensus 119 ~IttiErRF~i~Ss-~sG~I~s~~dig~~l~----i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~ 193 (735)
T KOG3626|consen 119 VITTIERRFKISSS-QSGLIASSYDIGNLLL----IIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYEL 193 (735)
T ss_pred hhhhhhhhcCCCCC-cceeEeeecccchhhh----hHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhh
Confidence 33444444555544 4555555444444322 667777778888888899999999998888765311100
Q ss_pred ---------C----------------------c---cchhhHHHHHHHHHHHHHhccc---ccccccccccccCcccccc
Q 009250 422 ---------D----------------------E---DFSHNLSILGTLFYIFTFAIGA---GPVTGLVIPELSSNRTRGK 464 (539)
Q Consensus 422 ---------~----------------------~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~ 464 (539)
+ . ...+...++.+++..+..++|. .++..+|+.|...++....
T Consensus 194 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~Spl 273 (735)
T KOG3626|consen 194 EVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPL 273 (735)
T ss_pred hhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcH
Confidence 0 0 0112223333333334444444 4566688889988888899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH------------------hC-cchhhHHHHHHHHHHHHhhheeeeCC
Q 009250 465 IMGFSFSVHWVCNFLVGLFFLDLVET------------------FG-VAPVYAGFGGVSLLSALFAYYFIVET 518 (539)
Q Consensus 465 ~~g~~~~~~~~g~~~~~~~~~~l~~~------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (539)
..|+.+++..+|-++|-.+.+..... .| |...|++.+++.++..+..+ +.|+.
T Consensus 274 Ylgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f-~fPk~ 345 (735)
T KOG3626|consen 274 YLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF-FFPKE 345 (735)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH-hCccc
Confidence 99999999988888887777766532 12 45557777777777766654 44433
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.59 E-value=0.25 Score=46.04 Aligned_cols=143 Identities=22% Similarity=0.196 Sum_probs=78.7
Q ss_pred HhHHHHHHHcCCChh-HHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccc
Q 009250 347 YFSSLTFQDVGITDG-ALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 425 (539)
Q Consensus 347 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (539)
...+.+..+...... ...........+...++ .++.|.+.||.|||+.+..+.....++.+...+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 90 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIG----SLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP-------- 90 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH----hhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------
Confidence 344555555544331 13333333333333222 68999999999999777766655334333333311
Q ss_pred hhhHHHHHHHHHHHHHhcc-cccccccccccccCc-ccccchhhHHHH-HHHHHHHHHHHHHHHHHHH--hCcchhhHHH
Q 009250 426 SHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSN-RTRGKIMGFSFS-VHWVCNFLVGLFFLDLVET--FGVAPVYAGF 500 (539)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~~~l~~~--~g~~~~~~~~ 500 (539)
..............+.+.+ ..+....+..|..|+ +.++...+.... ...++..+++.+.+.+... .+|+..+...
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 1111222222221233332 345666778888887 568888888888 5777888888776666554 3455544443
Q ss_pred H
Q 009250 501 G 501 (539)
Q Consensus 501 ~ 501 (539)
.
T Consensus 171 ~ 171 (338)
T COG0477 171 A 171 (338)
T ss_pred H
Confidence 3
No 285
>PRK03612 spermidine synthase; Provisional
Probab=95.17 E-value=0.29 Score=49.46 Aligned_cols=50 Identities=24% Similarity=0.319 Sum_probs=36.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHH-HHhCcchhhHHHHHHHHHHHHhh
Q 009250 462 RGKIMGFSFSVHWVCNFLVGLFFLDLV-ETFGVAPVYAGFGGVSLLSALFA 511 (539)
Q Consensus 462 ~~~~~g~~~~~~~~g~~~~~~~~~~l~-~~~g~~~~~~~~~~~~~~~~~~~ 511 (539)
.+...|-.+....+|+++|+.+.+.+. ...|.....++.+.+.++.+++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 567788889999999999999998765 46786666666666555555433
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.10 E-value=1 Score=41.43 Aligned_cols=72 Identities=14% Similarity=0.165 Sum_probs=53.1
Q ss_pred HHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC
Q 009250 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (539)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 206 (539)
.+....++++.+.+..++|-|.++.++...+...-. .=+-+.+..++..-.+.|+|.+..+..--+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 444456666677999999999999988777654322 223467888999999999999998877666665543
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.58 E-value=0.04 Score=49.62 Aligned_cols=137 Identities=14% Similarity=0.066 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 206 (539)
|.+.-+-.+...+..+.+....||+---+=..+..++.+.+.++.+++++.++-+.+-.+..++.|.....-.++.+ .+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cC
Confidence 55555556666677777788888865433355666777888888999999999999988888888876665554433 23
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccch
Q 009250 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVESP 268 (539)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (539)
+ ....+.++.+.+...++|..--..+.+..+ .-|.+.++...+-++.+...+++.++|
T Consensus 144 ~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 P----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred C----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 3 335556666666666666554444444111 167777777777666666666655544
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.72 E-value=0.36 Score=47.62 Aligned_cols=107 Identities=11% Similarity=0.030 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcch--HHHHHH--HHHHHHHHHHHHh---------hhcHHHHHHHHHHhhhchhh
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQID--TIPLILGAIISAQ---------AHSLDEMLWGRFLVGLGIGV 193 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~--~~~~~~~~~~~~~---------a~~~~~l~~~r~l~G~~~~~ 193 (539)
-.+..+|.++-.+|..+..+.. .-++| ++++.+ =+++.-..++|.. -++-+..++.-++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4566677777777776554321 11222 333221 2223333334432 24666677889999999999
Q ss_pred hhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcC
Q 009250 194 NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (539)
Q Consensus 194 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 234 (539)
....+..+..+..+++||..+..+...+..+|..+|..++.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988887753
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.13 E-value=3.6 Score=42.11 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=81.3
Q ss_pred hhhHHHHhhh-cCCchhhHhhHHHHHHHHHHHHHHhcCCCC---------c-----c-chhhHHHHHHHHHHHHHh-ccc
Q 009250 383 ALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLD---------E-----D-FSHNLSILGTLFYIFTFA-IGA 445 (539)
Q Consensus 383 ~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~-~~~~~~~~~~~~~~~~~~-~~~ 445 (539)
.+++++++|. +||.+.+.++.++..++..++......+.. . . ......++...+.....+ .+.
T Consensus 90 ~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~ 169 (571)
T KOG1237|consen 90 PLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGI 169 (571)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCC
Confidence 6788999997 488888888888888886666554332211 0 0 011112222222222222 223
Q ss_pred ccccccccccccC----ccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhh
Q 009250 446 GPVTGLVIPELSS----NRTRG--KIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAY 512 (539)
Q Consensus 446 ~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 512 (539)
-+...+.-+|.++ .+.+. .-+...+...++|..++-.+.-++-++.||...|.+..+...++.++.+
T Consensus 170 r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 170 RPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred CCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 4666677777776 22223 5666777777888888888888887889999888887777776665543
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.83 E-value=0.6 Score=46.51 Aligned_cols=107 Identities=10% Similarity=-0.080 Sum_probs=67.0
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhc-----CCCCccc-----------h------hhHHHHHHHHHHHH
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATS-----LPLDEDF-----------S------HNLSILGTLFYIFT 440 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----------~------~~~~~~~~~~~~~~ 440 (539)
..+-.++++++++.++..+........+.++++... ++.+... . ..+......+..=.
T Consensus 76 ~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aEl 155 (491)
T PF03219_consen 76 TILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAEL 155 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999999877666555555555544321 1111100 0 00011111111112
Q ss_pred Hhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009250 441 FAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 489 (539)
Q Consensus 441 ~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~ 489 (539)
++... .-..+.+.+|.++.++..+-.++.....++|.++++.+...+.+
T Consensus 156 wgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 156 WGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 23467889999999999999999999999999999998888777
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.82 E-value=1.3 Score=41.86 Aligned_cols=136 Identities=18% Similarity=0.102 Sum_probs=60.4
Q ss_pred hhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhh-----hcCCchhhHh-hHHHHHHHHHHHH
Q 009250 341 GINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMD-----KEGRQKLLIG-SYLGMAISMLLVV 414 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d-----r~g~r~~~~~-~~~~~~~~~~~~~ 414 (539)
-..... ..|.+++..+.+-..++..-+...-..- -+++..+.| |+|||+..++ +..+.+..+..+.
T Consensus 46 P~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sL-------KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 46 PLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSL-------KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred chhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHH-------HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 343333 7788888655553322211111111111 567777777 8999986544 3333333344443
Q ss_pred HHhcCCCC-ccchhhHHHHHHHHHHHHHhcccc-cccccccccccCcccccchhhHHHHHHHHHHHHHHHHH
Q 009250 415 GATSLPLD-EDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 484 (539)
Q Consensus 415 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 484 (539)
....-... ....+.....-..++..-+....+ .....+.-.+..++..|-+........+.|.+++-.++
T Consensus 118 ~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 118 YLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 32221111 111122222211222222222222 22233444455566666666655555556666554443
No 292
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.69 E-value=0.066 Score=48.31 Aligned_cols=142 Identities=12% Similarity=0.048 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhhhcccccchhH--HHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcch------HHHHHH
Q 009250 89 VLIASMSNFLFGYHIGVMNGPI--VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR------RTFQID 160 (539)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr------~~l~~~ 160 (539)
++-++..++..++.+....+.+ |. .+.+.++ .+.|.-|....|.+|..+.. -+-|+=+- .++..-
T Consensus 253 MvPL~~VY~~EY~INQGl~ell~F~c-~~g~sls-~~sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~v 325 (409)
T KOG3880|consen 253 MVPLALVYFAEYFINQGLAELLLFPC-SHGFSLS-KDSQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFV 325 (409)
T ss_pred HHHHHHHHHHHHHHhhhhHhhEEecc-ccCCccc-hhhcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHH
Confidence 4445556666665554444332 22 3344443 23456799999988754432 22222221 122233
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 161 TIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 161 ~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
.+++.+...+..+.++++..++.-+.-|+-.|..++...--+.+-.++++|-.+++...++-++|..++.+++-.+-
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 34455556666788999999999999999999999988888888888899999999999999999999998887654
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.37 E-value=0.045 Score=51.33 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-hcchHHHHHH--HHHHHHHHHHHH----------hhhcHHHHHHHHHHhhhchhhhh
Q 009250 129 VVSIFIAGAFVGSISSGSLADK-LGCRRTFQID--TIPLILGAIISA----------QAHSLDEMLWGRFLVGLGIGVNT 195 (539)
Q Consensus 129 ~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~--~~~~~~~~~~~~----------~a~~~~~l~~~r~l~G~~~~~~~ 195 (539)
+..+|.++-.+|....++.-=+ ..+|++++.+ =+++.-..++|. +.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567778878887776653211 1244443321 122222222221 23455667888999999999999
Q ss_pred hhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC
Q 009250 196 VLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 196 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 235 (539)
.....+..+..++++|..+..+......+|..+|..++..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888777643
No 294
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.63 E-value=0.18 Score=48.52 Aligned_cols=132 Identities=10% Similarity=-0.076 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcC
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 206 (539)
.|-..++.+...+.+....++++|+|-|+.+..+...+.++..+.+..++.+....-|-..|+-.+....+-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 35566777777799999999999999888888888888999999999999999888898888766665555555444432
Q ss_pred CC-----------------------CccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHH
Q 009250 207 PT-----------------------KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (539)
Q Consensus 207 ~~-----------------------~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 258 (539)
-. ..+|...|+.+....+-.++..+..|.+.+..|+=+.+-.+.+..++...
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~ 489 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIG 489 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHH
Confidence 11 12356677777777777777777777776666655555555555554443
No 295
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.61 E-value=1.7 Score=31.29 Aligned_cols=67 Identities=22% Similarity=0.135 Sum_probs=46.9
Q ss_pred HHHHhHHHHHHHcCCChhHHHHHHHHHHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHH
Q 009250 344 GVLYFSSLTFQDVGITDGALASLLVGVTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 415 (539)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 415 (539)
.++-.+|...++.+.+.. ..+.+-+...+.-.+| .+...++.++.++++.+..+.+...+..+.+.+
T Consensus 10 ayTplLP~M~~~~~ls~~-~ag~lasaNy~GYL~G----Al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLS-QAGWLASANYLGYLVG----ALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHhHhHHHHHhcCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 345577888888887755 4444444443333222 888888888877788888888888888888776
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.56 E-value=5 Score=38.56 Aligned_cols=19 Identities=11% Similarity=-0.144 Sum_probs=10.2
Q ss_pred hhHHHHHhHHHHHHHcCCC
Q 009250 341 GINGVLYFSSLTFQDVGIT 359 (539)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~ 359 (539)
-.+.+..-.+++.+.....
T Consensus 33 pWN~fiTa~~y~~~~~~~~ 51 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRFPGY 51 (406)
T ss_pred chHhhhccHHHHHhhcCCC
Confidence 3444555556666655444
No 297
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.00 E-value=15 Score=36.26 Aligned_cols=109 Identities=11% Similarity=-0.093 Sum_probs=66.9
Q ss_pred hhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhc-----CCCCccc--------h-h--h-------HHHHHHHHHH
Q 009250 382 CALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATS-----LPLDEDF--------S-H--N-------LSILGTLFYI 438 (539)
Q Consensus 382 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------~-~--~-------~~~~~~~~~~ 438 (539)
..++..++.+++.+.+++..........++++++... .+.+... + + + +......+..
T Consensus 78 f~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~a 157 (509)
T COG3202 78 FTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMA 157 (509)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHH
Confidence 3777888888888888777666655555555554332 1111000 0 0 0 1111111111
Q ss_pred HHHhccc-ccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009250 439 FTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 490 (539)
Q Consensus 439 ~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~ 490 (539)
=.++... .-+.+...+|....++..+-.++.+...+++..++..+..++..+
T Consensus 158 ELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 158 ELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1222222 235567788999999999999999999999999999888887653
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.04 E-value=9.1 Score=34.41 Aligned_cols=134 Identities=18% Similarity=0.160 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhcch--HHHHHHHHHHHHHHHHHHh----hh---cHHHHHHHHHHhhhchhhhh
Q 009250 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQ----AH---SLDEMLWGRFLVGLGIGVNT 195 (539)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----a~---~~~~l~~~r~l~G~~~~~~~ 195 (539)
--|.+.+.++++..+|+-+..++..|-..| ..+.+..++.++...+... +| +...=+++-++.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 348999999999999999998888876554 4444444444443333322 22 22223455556667778899
Q ss_pred hhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH
Q 009250 196 VLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (539)
Q Consensus 196 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 259 (539)
|....+-+++.|+++|...+.++..-.++=..++-..-..-....+ -|..|-++.+...+..+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~-tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTT-TRNMFGICSAFLFVASI 425 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccc-cchhhhhhHHHHHHHHH
Confidence 9999999999999999988888765444433332111001111122 66777777766655543
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.47 E-value=5.3 Score=35.70 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh-hcchHHHH----HHHHHHHHHHHHHHh-h----hcHHHHHHHHHHhhhchhhhhh
Q 009250 127 GLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQ----IDTIPLILGAIISAQ-A----HSLDEMLWGRFLVGLGIGVNTV 196 (539)
Q Consensus 127 ~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-a----~~~~~l~~~r~l~G~~~~~~~~ 196 (539)
....-++..|+.+|....|++... +.||+.+. .+++++.++.++... . .++..+++.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445667777778888888888774 55555443 334445555544212 1 1456677788888887655555
Q ss_pred hHHHHHHhcCCCCccccchhhhHHHHHHHHHH
Q 009250 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (539)
Q Consensus 197 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 228 (539)
+.... .+-+++.++-+.--.++..+++|.++
T Consensus 224 ViL~l-PhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNL-PHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcC-hhhhcCCCcceehhHHHHHHHHHHHH
Confidence 54433 22233333333444445556666544
No 300
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=83.88 E-value=16 Score=34.30 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=67.8
Q ss_pred hhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHH-----HHHHHHHHhh
Q 009250 100 GYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL-----ILGAIISAQA 174 (539)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~-----~~~~~~~~~a 174 (539)
+.+.-.+-..+..+...+. +.+-.|.+.+.+.|.+...+|+...-++.|.--.-+.+..-.++. +...+-..|+
T Consensus 20 aa~GlvyElal~tLatyLl-G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA 98 (508)
T COG4262 20 AACGLVYELALGTLATYLL-GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFA 98 (508)
T ss_pred HHhHHHHHHHHHHHHHHhc-CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3333334444555666653 236678899999999999999999998887543332222222222 1122222333
Q ss_pred ----hcHHHHHHHHHHhhhchhhhhhhHHHHHHh
Q 009250 175 ----HSLDEMLWGRFLVGLGIGVNTVLVPIYISE 204 (539)
Q Consensus 175 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 204 (539)
++-+.+++.-++.|.-.|...|....++..
T Consensus 99 ~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 99 LESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred hccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 456678888999999999999999988876
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=75.90 E-value=52 Score=28.68 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhh---hhhcchHHHHHHHHHH
Q 009250 128 LVVSIFIAGAFVGSISSGSLA---DKLGCRRTFQIDTIPL 164 (539)
Q Consensus 128 ~~~s~~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~ 164 (539)
+......+++.+|....+.+. ++..+|+.....+.+-
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~ 89 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLE 89 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Confidence 333444455556666666662 2333444444444333
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.73 E-value=7.8 Score=28.86 Aligned_cols=24 Identities=21% Similarity=0.188 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhh
Q 009250 128 LVVSIFIAGAFVGSISSGSLADKL 151 (539)
Q Consensus 128 ~~~s~~~~~~~~~~~~~g~l~dr~ 151 (539)
+-.++=+++..+.....||+.|||
T Consensus 46 ~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455566666777789999996
No 303
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=70.85 E-value=72 Score=29.92 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=17.8
Q ss_pred cHHHHHHHHHHhhhchhhhhhh-HHHHHHhcCCCCc
Q 009250 176 SLDEMLWGRFLVGLGIGVNTVL-VPIYISEVAPTKY 210 (539)
Q Consensus 176 ~~~~l~~~r~l~G~~~~~~~~~-~~~~i~~~~~~~~ 210 (539)
+...-.+--.+++++.|...-+ ..-++.|....++
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3344455566677766654433 3334455554443
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=69.67 E-value=19 Score=33.87 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=75.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhcch--HHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHH
Q 009250 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYI 202 (539)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i 202 (539)
.-|..-++..+..+++.+..|.+--++.|. ..+.++.+.-+...++++.++++|..+++-++.+.-.....+++..-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 336778888888899999999998888776 344445555566666777788999988888888777777888888888
Q ss_pred HhcCCCCccccchhhhHHH
Q 009250 203 SEVAPTKYRGSLGTLCQVG 221 (539)
Q Consensus 203 ~~~~~~~~r~~~~~~~~~~ 221 (539)
++....+.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888888888888877543
No 305
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=69.61 E-value=30 Score=28.20 Aligned_cols=52 Identities=17% Similarity=0.058 Sum_probs=36.9
Q ss_pred hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHH
Q 009250 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (539)
Q Consensus 175 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~ 229 (539)
+++..++..-++.|+| ...+.+.+++--+.+++-|..+|+-.+-.+++.+.-
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 5566666666665554 344556677778888889999999888888876653
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=68.90 E-value=16 Score=29.74 Aligned_cols=35 Identities=6% Similarity=-0.016 Sum_probs=25.5
Q ss_pred cccccccccccccCcccccchhhHHHHHHHHHHHH
Q 009250 445 AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 479 (539)
Q Consensus 445 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 479 (539)
...+.+..++....++..|+..|+-.+-.+++...
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 33345556666777888999999998888886654
No 307
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=68.37 E-value=50 Score=33.71 Aligned_cols=13 Identities=8% Similarity=0.348 Sum_probs=8.2
Q ss_pred hhhhhccCchhHH
Q 009250 315 WSELLEEPHSRVA 327 (539)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (539)
-.+++|.|....+
T Consensus 251 hgDVFR~P~~~~l 263 (521)
T PF02990_consen 251 HGDVFRPPKHPML 263 (521)
T ss_pred hHHHhcCcCCchH
Confidence 3577888775443
No 308
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=68.15 E-value=78 Score=28.28 Aligned_cols=23 Identities=17% Similarity=0.163 Sum_probs=15.0
Q ss_pred HHHHhhhcCCchhhHhhHHHHHH
Q 009250 386 ASYLMDKEGRQKLLIGSYLGMAI 408 (539)
Q Consensus 386 ~g~l~dr~g~r~~~~~~~~~~~~ 408 (539)
+-+++.|+.-|.+.+.+.++..+
T Consensus 260 Gk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred hHHHhhhheeEEEEEecchhHHH
Confidence 34577788888877766554443
No 309
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=64.79 E-value=58 Score=31.21 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Q 009250 467 GFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLL 506 (539)
Q Consensus 467 g~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 506 (539)
+....+-..-..+.|.+.|.+....+.+..-.++++-.++
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 4444445566788999999888776655544444443333
No 310
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=59.77 E-value=44 Score=33.35 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=40.4
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHH
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~ 229 (539)
+++.-++.-+..-..+++..++-+...+|.-=|..|.+.+...++|.-.-
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP 457 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWP 457 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCch
Confidence 33446777777778888999999999999999999999999888885433
No 311
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=58.69 E-value=1.7e+02 Score=28.27 Aligned_cols=165 Identities=9% Similarity=-0.040 Sum_probs=86.9
Q ss_pred HHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 009250 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (539)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 169 (539)
+.+++++++....--+..........+++-+ +-...+.-..+-.....+..++.|...|+..|+|++...+.+.-++.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gn-sl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGN-SLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCc-eehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 3456666666666655555566566666531 222222222233334456777888999999999999888776544443
Q ss_pred HHH------hh------hcHHHHHHHHHHhhhchhhh--hhhHH--HHHHhcC----CCCccc---cchhhhHHHHHHHH
Q 009250 170 ISA------QA------HSLDEMLWGRFLVGLGIGVN--TVLVP--IYISEVA----PTKYRG---SLGTLCQVGTCLGI 226 (539)
Q Consensus 170 ~~~------~a------~~~~~l~~~r~l~G~~~~~~--~~~~~--~~i~~~~----~~~~r~---~~~~~~~~~~~~G~ 226 (539)
.++ +. .++..+..+-++.-.-.+.. ...+. .+-.||. ..+.+. +..+..-..-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 333 22 35555554444333222211 11111 1122332 122222 22344444555667
Q ss_pred HHHHHhcCCCCCCcchhHHHHHhhHHHHHH
Q 009250 227 ITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (539)
Q Consensus 227 ~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 256 (539)
++.|++.+.+....+ -|..-.+.++..++
T Consensus 189 ~Lapv~tg~Iitfvs-l~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVS-LRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeec-hhhhhhhhHHHHHH
Confidence 888888888887666 66654444544444
No 312
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=57.31 E-value=34 Score=22.48 Aligned_cols=48 Identities=17% Similarity=0.061 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccc
Q 009250 219 QVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (539)
Q Consensus 219 ~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (539)
..+.-+|.+++.+.+.......+ ++....+..+.+++..++...++++
T Consensus 8 fWs~il~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 8 FWSFILGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34556677777666665555555 7777777777777777666666654
No 313
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.83 E-value=21 Score=26.70 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=28.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009250 459 NRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 492 (539)
Q Consensus 459 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g 492 (539)
++.++.+.++-...-.+++++.....|++.|++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4457888888888888999999999999999864
No 314
>COG3619 Predicted membrane protein [Function unknown]
Probab=53.85 E-value=1.6e+02 Score=26.06 Aligned_cols=67 Identities=6% Similarity=0.087 Sum_probs=32.7
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhhhhhcc-hH-H-HHHHHHHHHHHHHHHHhh----hcHHHHHHHHHHhh
Q 009250 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RR-T-FQIDTIPLILGAIISAQA----HSLDEMLWGRFLVG 188 (539)
Q Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-~-l~~~~~~~~~~~~~~~~a----~~~~~l~~~r~l~G 188 (539)
++...........+...+|......+..|..| .. . .....++..+..+..++. ++....+..-+.+|
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg 126 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMG 126 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 44455666667777777775555555544443 12 2 222333333333344432 35555444455554
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=52.44 E-value=72 Score=36.02 Aligned_cols=19 Identities=11% Similarity=-0.004 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHhCc
Q 009250 475 VCNFLVGLFFLDLVETFGV 493 (539)
Q Consensus 475 ~g~~~~~~~~~~l~~~~g~ 493 (539)
.||++|..+...+...+|.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 3555555555555555543
No 316
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=52.28 E-value=70 Score=30.30 Aligned_cols=19 Identities=11% Similarity=0.009 Sum_probs=8.0
Q ss_pred HHHHHHHHHHhCcchhhHH
Q 009250 481 GLFFLDLVETFGVAPVYAG 499 (539)
Q Consensus 481 ~~~~~~l~~~~g~~~~~~~ 499 (539)
..+.+.+..+....+.+.+
T Consensus 273 ali~~i~~f~~~~~~ly~~ 291 (334)
T PF06027_consen 273 ALIIDIFFFGYKFSWLYIL 291 (334)
T ss_pred HHHHHHHhcCccccHHHHH
Confidence 3344444433344444443
No 317
>COG4769 Predicted membrane protein [Function unknown]
Probab=50.43 E-value=31 Score=28.15 Aligned_cols=55 Identities=15% Similarity=0.107 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchh
Q 009250 132 IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIG 192 (539)
Q Consensus 132 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 192 (539)
++.+..++.+...-++..++|+|.+-.+|.- ...+|.+|..++++.+++.|-...
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~~v 135 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTTSV 135 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcchH
Confidence 4445555667777788899999987555433 234678999999999998875443
No 318
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.95 E-value=1.2 Score=39.42 Aligned_cols=380 Identities=9% Similarity=-0.003 Sum_probs=0.0
Q ss_pred ccccccCCCCCchHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhh---
Q 009250 73 KAEEGFDLGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD--- 149 (539)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d--- 149 (539)
..+++++...+-.....+.-..+.+++-.+.+.....+-.+.++.|+ ++....+++-+....-++..++.|...|
T Consensus 3 ~~~eeDPstkPigr~svf~yGvGHmlNDitAScWFTYlllfltqigl--sp~~~AmlML~GQVtda~st~ftGi~~d~nl 80 (412)
T KOG4830|consen 3 PVREEDPSTKPIGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQIGL--SPSSRAMLMLIGQVTDAISTPFTGIFSDSNL 80 (412)
T ss_pred CcccCCCCCCcccceeeeeechhHHHhhHHHHHHHHHHHHHHHHhcC--CcchhHHHHHhhHHHHHHhcccccccccccc
Q ss_pred ------hhcchHHHHHHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCC
Q 009250 150 ------KLGCRRTFQIDTIPLILGAIISAQA--------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (539)
Q Consensus 150 ------r~Grr~~l~~~~~~~~~~~~~~~~a--------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 209 (539)
|+|||+..-....+...-+.-+.+. -|..++.++-.+.|++-+...-...+.+
T Consensus 81 l~~~idr~G~~~~wh~~gt~lVslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A~~ke~tea~~------- 153 (412)
T KOG4830|consen 81 LPACIDRIGRRMSWHLIGTVLVSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWASVKESTEALI------- 153 (412)
T ss_pred cHHHhhhhcceeeeeecccEEEEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeeecccccHHHHH-------
Q ss_pred ccccchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccchHHHHhcCChhHHHHHHHHHcC
Q 009250 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG 289 (539)
Q Consensus 210 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 289 (539)
||.-|....+++...++.+..-++|+........+.++
T Consensus 154 ----------------------------------R~~~~~~v~lG~~~~~vF~~~TrEP~~~~~~~~s~~~R-------- 191 (412)
T KOG4830|consen 154 ----------------------------------RLAGWLVVVLGITVAFVFYAFTREPTNSFSSDASELVR-------- 191 (412)
T ss_pred ----------------------------------HHhhhheeeeceeEEEEEeecccCcccccCcchhhhhc--------
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcchhhhhhccCchhHHHHHHHHHHHhhhhhhHHHHHhHHHHHHHcCCChhHHHHHHHH
Q 009250 290 ESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVG 369 (539)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (539)
..|..-++...+....+.+.+.-........-+.++...-++-.....+..-...+.
T Consensus 192 -----------------------m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl 248 (412)
T KOG4830|consen 192 -----------------------MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYL 248 (412)
T ss_pred -----------------------ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHH
Q ss_pred HHHhcccccccchhhhHHHHhhhcCCchhhHhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccc
Q 009250 370 VTNFAGLRSEKYCALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVT 449 (539)
Q Consensus 370 ~~~~~~~i~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (539)
...... ....-.--++...|.....|.+.-..+...+.+.+ .........+..++...-.-+......
T Consensus 249 ~SF~VS-------~v~~eipwngkrlKayYsaGgiiwifcga~ilLlp-----r~i~symyAisvfIGIAnAimlvtsls 316 (412)
T KOG4830|consen 249 SSFSVS-------MVNSEIPWNGKRLKAYYSAGGIIWIFCGAVILLLP-----RGIKSYMYAISVFIGIANAIMLVTSLS 316 (412)
T ss_pred hhhhHH-------hhcccCCcCcceeeeeeecccHHHHHhhhheeecc-----cchHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ccccccccCcccccchhhHHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCCC
Q 009250 450 GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF-------LDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRS 522 (539)
Q Consensus 450 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~-------~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (539)
..-.--....+..+-..|..+++-.+...++-.+. ..+-....++..+...-+.+++.+++.++-+...+-.+
T Consensus 317 itavli~~~~~~~aFv~GamSF~DKlS~GiA~~lie~~~~a~~~~k~~~~~r~V~v~V~G~~LV~A~~~~l~lA~~~~~E 396 (412)
T KOG4830|consen 317 ITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKSAIFYRRVMVFVPGTCLVLAFLVLLSLAPFKIGE 396 (412)
T ss_pred HHHHHhhcccCCceEEEehHHHHHhhcccHHHHHHHhcCCcchhhhhhhhheEEEEEecchhHHHHHHHHHhhhhHhhhh
Q ss_pred HHHHHHHhccCCCCCC
Q 009250 523 LEEIEMSLNANSTPGN 538 (539)
Q Consensus 523 ~~~~~~~~~~~~~~~~ 538 (539)
+++...+.++.-.+.+
T Consensus 397 ~~~A~~~~e~~i~e~~ 412 (412)
T KOG4830|consen 397 RRRARPEDEQAIMEDQ 412 (412)
T ss_pred hhhcCCcchhhhhccC
No 319
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=45.40 E-value=2.6e+02 Score=26.71 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 009250 472 VHWVCNFLVGLFFLDL 487 (539)
Q Consensus 472 ~~~~g~~~~~~~~~~l 487 (539)
.-++|...+..+...+
T Consensus 147 ~DYLGal~~gLl~p~l 162 (508)
T COG4262 147 LDYLGALAGGLLWPFL 162 (508)
T ss_pred hHhhhhhhHHHHHHHH
Confidence 3566666666655544
No 320
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=43.33 E-value=1.9e+02 Score=26.78 Aligned_cols=82 Identities=16% Similarity=0.172 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHhhhhhhhhh---hcchHHHHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK---LGCRRTFQID 160 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~ 160 (539)
++....+.+.+++++.-+..+...-.+..+.+.++. -....+++.+.. ...+..+-.++ ||.||.=+++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hm--l~D~~al~lal~------A~~~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHM--LSDALALLLALI------AIKLARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHH--HHHHHHHHHHHH------HHHHhcCCCCCCCCccHhHHHHHH
Confidence 444455555566565555556666667777777775 333223333332 22233344443 8888887777
Q ss_pred HHHHHHHHHHHHh
Q 009250 161 TIPLILGAIISAQ 173 (539)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (539)
.++.++..+..++
T Consensus 94 a~~nav~Li~~s~ 106 (296)
T COG1230 94 AFLNALLLIVVSL 106 (296)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666655543
No 321
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=42.57 E-value=1.1e+02 Score=25.00 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcchH
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGCRR 155 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Grr~ 155 (539)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34678888899999999999988764
No 322
>PRK15015 carbon starvation protein A; Provisional
Probab=39.65 E-value=4.7e+02 Score=27.44 Aligned_cols=98 Identities=13% Similarity=0.018 Sum_probs=48.5
Q ss_pred HHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHH-HHhcCCCCccc
Q 009250 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY-ISEVAPTKYRG 212 (539)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~~~r~ 212 (539)
.....++..-+|.++-+-|-..--+ .+..++......+-.++.-++.+=+.++=-.-..|+-.-. -.|+.|.+++
T Consensus 11 ~~~a~~ga~~~~~~al~rge~mnal---~lv~aa~~~y~iaYrfYgr~ia~kv~~lD~~r~TPA~~~~DG~DYvPt~k~- 86 (701)
T PRK15015 11 TVLSVMGAFALGYIALNRGEQINAL---WIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKK- 86 (701)
T ss_pred HHHHHHHHHHheeeeecCCCchhHH---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCceECCCCCCcCcCCcc-
Confidence 3444566666777766666552111 1122222222233333444444444455444333332211 2466676644
Q ss_pred cchhh-hHHHHHHHHHHHHHhcCC
Q 009250 213 SLGTL-CQVGTCLGIITSLFLGIP 235 (539)
Q Consensus 213 ~~~~~-~~~~~~~G~~~~~~~~~~ 235 (539)
..+|- +....+.|.++||.++..
T Consensus 87 VLfGHHFasIAGAGPivGPvlAa~ 110 (701)
T PRK15015 87 VLFGHHFAAIAGAGPLVGPVLAAQ 110 (701)
T ss_pred chhHHHHHHHhccCccHHHHHHHH
Confidence 34444 456667788888888763
No 323
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=34.53 E-value=2.8e+02 Score=29.64 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=35.7
Q ss_pred hhhhhhhh----hcchHHHHHHHHHHHHHHHHHHhhhcHH-HHHHHHHHhhhchhhhhh
Q 009250 143 SSGSLADK----LGCRRTFQIDTIPLILGAIISAQAHSLD-EMLWGRFLVGLGIGVNTV 196 (539)
Q Consensus 143 ~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~a~~~~-~l~~~r~l~G~~~~~~~~ 196 (539)
+.+-+.|. -||.+-++++.++++++++...+...++ .+...-++.+++.+....
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 34445553 4678889999999999999888765544 455556666665554433
No 324
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=34.35 E-value=6.4e+02 Score=27.39 Aligned_cols=33 Identities=6% Similarity=-0.054 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHH
Q 009250 221 GTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPG 254 (539)
Q Consensus 221 ~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 254 (539)
+..++.++..+++.++....+ |...+++.++++
T Consensus 109 ~M~lT~livAL~a~~Li~GL~-~~~ALLLGAILA 141 (810)
T TIGR00844 109 VMTSGWLVIALFVWILVPGLN-FPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHcCCC-HHHHHHHHhhhc
Confidence 334444444444443422334 666666555544
No 325
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=33.13 E-value=1.3e+02 Score=25.52 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcc
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGC 153 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Gr 153 (539)
+.-|.+++.+...+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 457888999999999999999885
No 326
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=32.78 E-value=80 Score=23.81 Aligned_cols=50 Identities=24% Similarity=0.105 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh
Q 009250 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (539)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (539)
..|=+.++|.-.+.+.++.+++..|+.-+.+-=.+|..+..++.....+.
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34778889999999999999999999988877777777777776665444
No 327
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=32.13 E-value=3.8e+02 Score=28.66 Aligned_cols=51 Identities=12% Similarity=0.041 Sum_probs=33.8
Q ss_pred hhhhhhh----hcchHHHHHHHHHHHHHHHHHHhhhcH-HHHHHHHHHhhhchhhh
Q 009250 144 SGSLADK----LGCRRTFQIDTIPLILGAIISAQAHSL-DEMLWGRFLVGLGIGVN 194 (539)
Q Consensus 144 ~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~a~~~-~~l~~~r~l~G~~~~~~ 194 (539)
.+-++|. -||.+-++++.+++.++++...+...+ +.+..+-++.+++.+..
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 3555553 467788889999999888888766544 44555556665555433
No 328
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=32.07 E-value=1.4e+02 Score=21.58 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=29.7
Q ss_pred HHHHHHhhhhhhhhhhcc-------hHHHHHHHHHHHHHHHHHHhhhcH
Q 009250 136 GAFVGSISSGSLADKLGC-------RRTFQIDTIPLILGAIISAQAHSL 177 (539)
Q Consensus 136 ~~~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~a~~~ 177 (539)
+.....+.++++.+|.-+ ++.+..+.++...+.+++++.+|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 334556666677766654 788888888888888888876653
No 329
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=31.64 E-value=2.4e+02 Score=25.53 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=11.6
Q ss_pred hHHHHHhhHHHHHHHHHHhcccc
Q 009250 243 WRTMLYIASLPGFILALGMQFTV 265 (539)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~ 265 (539)
..+.=++..++.++...+..++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeec
Confidence 44444555555555555555543
No 330
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=31.37 E-value=2e+02 Score=21.92 Aligned_cols=47 Identities=13% Similarity=0.008 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCC
Q 009250 161 TIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP 207 (539)
Q Consensus 161 ~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 207 (539)
.++..+++++.++......---.|.+.+.|.-+.++.-.++..|...
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 33455566555543221100113444455555556666777777665
No 331
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=30.24 E-value=56 Score=24.78 Aligned_cols=36 Identities=11% Similarity=-0.196 Sum_probs=24.7
Q ss_pred HHHHHhCcchhhHHHHHHHHHHHHhhheeeeCCCCC
Q 009250 486 DLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGR 521 (539)
Q Consensus 486 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (539)
.-.|..+|..++++...++++.+.+.+.+.|+++-+
T Consensus 52 ~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~ 87 (105)
T PF10183_consen 52 EKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQ 87 (105)
T ss_pred CcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 455677888888776666666666666677776543
No 332
>PRK10263 DNA translocase FtsK; Provisional
Probab=29.31 E-value=1e+02 Score=34.91 Aligned_cols=19 Identities=21% Similarity=0.232 Sum_probs=8.8
Q ss_pred HHHHHHHHhhhhhhhhhhc
Q 009250 134 IAGAFVGSISSGSLADKLG 152 (539)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~G 152 (539)
.++..+|..+...+..-||
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3344444444444444455
No 333
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=28.92 E-value=72 Score=24.65 Aligned_cols=21 Identities=5% Similarity=0.007 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHhCcc
Q 009250 474 WVCNFLVGLFFLDLVETFGVA 494 (539)
Q Consensus 474 ~~g~~~~~~~~~~l~~~~g~~ 494 (539)
-+...+.|.+...+.+..|..
T Consensus 43 ~l~~~ifP~~~~~vA~~lGi~ 63 (115)
T PF10066_consen 43 LLILSIFPNILDWVAKLLGIG 63 (115)
T ss_pred HHHHHhhhhHHHHHHHHHCCC
Confidence 344556677777777777743
No 334
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=28.83 E-value=1.4e+02 Score=20.49 Aligned_cols=25 Identities=16% Similarity=0.347 Sum_probs=12.4
Q ss_pred HHHHHHhhheeeeCCCCCCHHHHHH
Q 009250 504 SLLSALFAYYFIVETKGRSLEEIEM 528 (539)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (539)
.+++..+.+++.++.|++-.++..+
T Consensus 40 ~vis~~lS~~ll~~~R~~~~~~ia~ 64 (69)
T PF14012_consen 40 LVISMPLSYVLLRRLRDRASADIAA 64 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555556665555444444443
No 335
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=28.59 E-value=1.7e+02 Score=18.87 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhhhhhhhhh-hcchHHHHHHHHHHH
Q 009250 132 IFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLI 165 (539)
Q Consensus 132 ~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~ 165 (539)
.......+.....|+..|+ +|.++...+..++.+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 4444555666777887775 566555544444433
No 336
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=28.39 E-value=4e+02 Score=23.16 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=8.7
Q ss_pred HHhhHHHHHHHHHHhccc
Q 009250 247 LYIASLPGFILALGMQFT 264 (539)
Q Consensus 247 f~~~~~~~~~~~~~~~~~ 264 (539)
.++..++++++.++.+++
T Consensus 180 ~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYL 197 (206)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445555555554443
No 337
>PRK10692 hypothetical protein; Provisional
Probab=27.12 E-value=1.8e+02 Score=20.85 Aligned_cols=19 Identities=11% Similarity=0.242 Sum_probs=10.2
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 009250 153 CRRTFQIDTIPLILGAIIS 171 (539)
Q Consensus 153 rr~~l~~~~~~~~~~~~~~ 171 (539)
||...++|-++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 4555555555555555443
No 338
>COG1288 Predicted membrane protein [Function unknown]
Probab=26.97 E-value=4.4e+02 Score=26.01 Aligned_cols=100 Identities=14% Similarity=0.036 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHH--HHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCC-C
Q 009250 160 DTIPLILGAIISAQAHSLDEMLW--GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP-A 236 (539)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~~l~~--~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~-l 236 (539)
..++++++...++....--.++. .=++.-.|.-....++..+++ .+-|.+.++ .+..+..++.-+++. +
T Consensus 141 l~ilFslgGt~~Gm~EEaiaFypIliPv~ialGyDsi~~va~i~lg-----t~iG~~~St---~NPF~~~IAq~iAGip~ 212 (481)
T COG1288 141 LFILFSLGGTVFGMGEEAIAFYPILIPLMVALGYDSITGVAIIYIG-----TQIGFAAST---MNPFATVIAQNIAGIPF 212 (481)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-----hccchhhhh---cCchHHHHHhhhcCCcc
Confidence 44456666666666543222111 112222222223333333333 223433333 334555555555544 3
Q ss_pred CCCcchhHHHHHhhHHHHHHHHHHhcc--cccch
Q 009250 237 EDDPHWWRTMLYIASLPGFILALGMQF--TVESP 268 (539)
Q Consensus 237 ~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~~~p 268 (539)
.+..+ ||...|+...+..+..+.++. +.++|
T Consensus 213 ~sG~~-~Riv~~v~~~~~~i~y~~~Ya~KvkkdP 245 (481)
T COG1288 213 LSGMG-LRIVVWVVFTLISIIYVYWYASKVKKDP 245 (481)
T ss_pred cccch-HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34445 999999888776666554433 44444
No 339
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.68 E-value=2.6e+02 Score=20.99 Aligned_cols=29 Identities=7% Similarity=-0.127 Sum_probs=13.0
Q ss_pred hhHHHHhhhcCCchhhHhhHHHHHHHHHH
Q 009250 384 LCASYLMDKEGRQKLLIGSYLGMAISMLL 412 (539)
Q Consensus 384 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 412 (539)
+++-|+=++++....+.+.+++.+++..+
T Consensus 61 ~lG~WLD~~~~t~~~~tl~~lllGv~~G~ 89 (100)
T TIGR02230 61 AVGIWLDRHYPSPFSWTLTMLIVGVVIGC 89 (100)
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 33334433466555444444444444333
No 340
>PRK02237 hypothetical protein; Provisional
Probab=26.67 E-value=1.5e+02 Score=22.49 Aligned_cols=50 Identities=18% Similarity=0.029 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhh
Q 009250 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (539)
Q Consensus 126 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 175 (539)
.|=+.++|.-.+.+.++.+++..|+.-+-+-=.+|..+..+|..+..+.|
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 57788899999999999999999998887777777777777766554443
No 341
>PRK11588 hypothetical protein; Provisional
Probab=25.95 E-value=7.1e+02 Score=25.31 Aligned_cols=40 Identities=13% Similarity=-0.038 Sum_probs=24.1
Q ss_pred hhhhhhhhcchH--HHHHHHHHHHHHHHHHHhhhcHHHHHHH
Q 009250 144 SGSLADKLGCRR--TFQIDTIPLILGAIISAQAHSLDEMLWG 183 (539)
Q Consensus 144 ~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 183 (539)
.+++.+|++.|. ++.+.+++++++....++++....++..
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi 177 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAII 177 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 356677887663 4444566667777667776654444433
No 342
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=25.69 E-value=93 Score=29.59 Aligned_cols=37 Identities=3% Similarity=-0.144 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHH
Q 009250 128 LVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (539)
Q Consensus 128 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 166 (539)
++.+...+-....+.+.+ .||+.-.|++.+.+-+.++
T Consensus 190 ilSStSs~FtL~la~if~--~e~ft~sKllav~~si~GV 226 (416)
T KOG2765|consen 190 ILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFVSIAGV 226 (416)
T ss_pred hhhhcchHHHHHHHHHcC--cchhhHHHHHHHHHhhccE
Confidence 343333333333333444 9999999987665444433
No 343
>PRK11469 hypothetical protein; Provisional
Probab=25.40 E-value=3.4e+02 Score=23.24 Aligned_cols=76 Identities=14% Similarity=0.086 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHh-hhhhhhhhhcchHHHHHHHHHH
Q 009250 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSI-SSGSLADKLGCRRTFQIDTIPL 164 (539)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~g~l~dr~Grr~~l~~~~~~~ 164 (539)
++-.+.+.++.-++.+..+.-... .|. +.........+..+....... +..++.+++|+|.-++-|.++.
T Consensus 105 ~~~~l~LaiAtSiDAlavGi~~~~-------~g~--~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI 175 (188)
T PRK11469 105 FWLLVTTAIATSLDAMAVGVGLAF-------LQV--NIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLI 175 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------hhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344666666666665554432211 122 333333444444444433333 4445667788888887788777
Q ss_pred HHHHHH
Q 009250 165 ILGAII 170 (539)
Q Consensus 165 ~~~~~~ 170 (539)
.++.-.
T Consensus 176 ~iGi~i 181 (188)
T PRK11469 176 GIGVQI 181 (188)
T ss_pred HHHHHH
Confidence 776543
No 344
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.83 E-value=28 Score=30.40 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=33.8
Q ss_pred HHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHh
Q 009250 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (539)
Q Consensus 182 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~ 232 (539)
..-.-.|+|.|....++..-+.+.+|+. .....++-..++.+..+.|-.+
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P~~-a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYPEM-ADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445579999999999999999999754 4445555555555555554333
No 345
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=24.64 E-value=3.7e+02 Score=23.38 Aligned_cols=60 Identities=17% Similarity=0.334 Sum_probs=30.7
Q ss_pred cccccccCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHhh
Q 009250 451 LVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVA-PVYAGFGGVSLLSALFA 511 (539)
Q Consensus 451 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~ 511 (539)
.+..+. ++++|-+..--......+...+.......+.+.+|-. ..|-+.+++.+....+-
T Consensus 26 ~lt~~~-~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ 86 (203)
T PF01914_consen 26 SLTKGM-SPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALE 86 (203)
T ss_pred HHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 334333 4443434433333334444445555556666777744 34666666666555544
No 346
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=24.43 E-value=6.3e+02 Score=24.14 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=18.8
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHH
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMA 407 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~ 407 (539)
+++.+.+.+++|-|+.+.++.....
T Consensus 75 ~m~~~~~Ir~~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 75 SMFMPLLIRFLGTKWTMVLAVFPYA 99 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6666789999999998876655443
No 347
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=22.99 E-value=4.6e+02 Score=22.08 Aligned_cols=22 Identities=5% Similarity=0.018 Sum_probs=12.5
Q ss_pred cCcccccchhhHHHHHHHHHHH
Q 009250 457 SSNRTRGKIMGFSFSVHWVCNF 478 (539)
Q Consensus 457 ~p~~~~~~~~g~~~~~~~~g~~ 478 (539)
-|.+....++++.-.+..+-.+
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti 131 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITI 131 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHH
Confidence 3555566677766655554433
No 348
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=22.67 E-value=3.7e+02 Score=24.81 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHhhhchhhhh
Q 009250 157 FQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNT 195 (539)
Q Consensus 157 l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~ 195 (539)
++.+++++++++++..+. ++.+.+.+.-++.+++.+...
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~ 41 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLG 41 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 345555665666665554 445555555666666555433
No 349
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=22.52 E-value=7.9e+02 Score=26.42 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=16.3
Q ss_pred cccCcccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 009250 455 ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 488 (539)
Q Consensus 455 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~l~ 488 (539)
..++.+..|...+=.+-...+=.++...+...+.
T Consensus 243 ~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~ii 276 (709)
T COG2274 243 SYFEKRSVGEIISRVRELEQIREFLTGSILTLII 276 (709)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445455555555555555444444444443333
No 350
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=21.99 E-value=2.1e+02 Score=28.77 Aligned_cols=20 Identities=10% Similarity=-0.120 Sum_probs=9.9
Q ss_pred HHhhHHHHHHHHHHhccccc
Q 009250 247 LYIASLPGFILALGMQFTVE 266 (539)
Q Consensus 247 f~~~~~~~~~~~~~~~~~~~ 266 (539)
|.+..++.+...++-++.|.
T Consensus 5 ~~il~iiiv~~~ilt~~iPa 24 (465)
T PF03606_consen 5 FVILFIIIVFAAILTWIIPA 24 (465)
T ss_pred HHHHHHHHHHHHHHHhcCcc
Confidence 44444444445555555554
No 351
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=21.87 E-value=2e+02 Score=18.07 Aligned_cols=14 Identities=14% Similarity=-0.047 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHhC
Q 009250 479 LVGLFFLDLVETFG 492 (539)
Q Consensus 479 ~~~~~~~~l~~~~g 492 (539)
+|..+.+++....+
T Consensus 6 iGa~vGg~l~~~lg 19 (48)
T PF04226_consen 6 IGAFVGGWLFGLLG 19 (48)
T ss_pred HHHHHHHHHHHHhc
Confidence 34444444444444
No 352
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=21.85 E-value=4.1e+02 Score=21.04 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=13.2
Q ss_pred HHHhhhchhhhhhhHHHHHHhcCC
Q 009250 184 RFLVGLGIGVNTVLVPIYISEVAP 207 (539)
Q Consensus 184 r~l~G~~~~~~~~~~~~~i~~~~~ 207 (539)
|.+.+.|.-+.++.-.++..|...
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~ 92 (128)
T PRK14199 69 KLFLTTGIMGGLTTFSTFSYETIN 92 (128)
T ss_pred HHHHHhHHhcccccHHHHHHHHHH
Confidence 334444444456666666666664
No 353
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=21.56 E-value=2.1e+02 Score=23.30 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHh
Q 009250 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (539)
Q Consensus 130 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 187 (539)
.-.+.++..+.+...-.+..|..||+.=.++. +++.+.++|..|++++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 35667777788888888888887665544432 23345677777777776653
No 354
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.27 E-value=5e+02 Score=21.79 Aligned_cols=61 Identities=16% Similarity=0.040 Sum_probs=34.2
Q ss_pred hhhhhhhcchHHHHH-HHHHHHHHHHHHHh-hhcHHHHHHHHHHhhhchhhhhhhHHHHHHhcCCCCccc
Q 009250 145 GSLADKLGCRRTFQI-DTIPLILGAIISAQ-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG 212 (539)
Q Consensus 145 g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 212 (539)
..+..-+.++|.... ..+...+.++.+++ .+|...=+++-++|.++. .-|.-.++|-.++|
T Consensus 100 ~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~lal-------iwYslSyiP~g~~g 162 (175)
T KOG2887|consen 100 SQLKHMFSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLAL-------IWYSLSYIPFGRSG 162 (175)
T ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhH
Confidence 345555666554443 44445555555553 467766666777776543 22445566766554
No 355
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=21.26 E-value=3.9e+02 Score=24.70 Aligned_cols=57 Identities=14% Similarity=0.056 Sum_probs=35.5
Q ss_pred HHHHHHHhhhchhhhhhhHHHHHHhcCCCCccccchhhhHHHHHHHHHHHHHhcCCCC
Q 009250 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (539)
Q Consensus 180 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 237 (539)
.-..|.+.|+-. ..+..+++++.-.||++++--..--...+.+++.++-+++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888765 466778899999999665433333334444445555566655443
No 356
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=21.11 E-value=2.1e+02 Score=25.22 Aligned_cols=73 Identities=19% Similarity=0.048 Sum_probs=37.8
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc--cccchHHHHhcCChhHHHHHHHHHcC
Q 009250 213 SLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF--TVESPRWLCKGGMLNDAKAVIANLWG 289 (539)
Q Consensus 213 ~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~ 289 (539)
....++..+..++.++..++-+++.. +.|.+.+.+++..+.+..+.| --|...|-...++...+..+++++++
T Consensus 25 p~l~~~ml~a~l~~~~v~v~ig~l~~----~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 25 PKLPWLMLGAFLGPIAVFVLIGLLFG----SWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 34455555555554444444444433 235555555554444433333 23444555666777777777776654
No 357
>COG1422 Predicted membrane protein [Function unknown]
Probab=21.01 E-value=5.4e+02 Score=22.17 Aligned_cols=40 Identities=10% Similarity=0.168 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHH-HHHhccccc
Q 009250 221 GTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL-ALGMQFTVE 266 (539)
Q Consensus 221 ~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~~ 266 (539)
...+...++|+++. .+ ..+..++.+++..+. -++-.++.|
T Consensus 30 ~~~ln~~f~P~i~~-----~~-p~lvilV~avi~gl~~~i~~~~liD 70 (201)
T COG1422 30 GGALNVVFGPLLSP-----LP-PHLVILVAAVITGLYITILQKLLID 70 (201)
T ss_pred HHHHHHHHhhhccc-----cc-cHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44455566666654 22 445555555444333 333344443
No 358
>PRK03818 putative transporter; Validated
Probab=20.85 E-value=7.4e+02 Score=25.64 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHHHHHHHHHHHHHHHHhh-hcHHHHHHHHHHhhhchhhhhhhHHHHHH
Q 009250 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (539)
Q Consensus 125 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 203 (539)
+.|+..-++.+|...|.-+..-+.+..|.+.. +.+.++..+..+.+.+. .-..-+=..+.+-.++.+...+...+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 45666667777776777666665555666544 34444444444433332 22222222344444555666777778888
Q ss_pred hc
Q 009250 204 EV 205 (539)
Q Consensus 204 ~~ 205 (539)
|.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 85
No 359
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.71 E-value=5.1e+02 Score=25.69 Aligned_cols=28 Identities=14% Similarity=0.282 Sum_probs=13.9
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHHH
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAISM 410 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 410 (539)
.+++-++.+.+.++++..+=.++.++++
T Consensus 308 TF~~fflfE~~~~~~iHpiQY~LVGlAl 335 (430)
T PF06123_consen 308 TFLAFFLFELLSKLRIHPIQYLLVGLAL 335 (430)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 4444456666666665444333333333
No 360
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=20.54 E-value=7.7e+02 Score=23.75 Aligned_cols=44 Identities=16% Similarity=0.340 Sum_probs=28.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccchhHHHHHHHhCCCCCchhhHHH
Q 009250 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLV 129 (539)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (539)
..+....++..+.....+..-.....+....+++|. ++...|.+
T Consensus 218 s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~--~~~F~G~i 261 (368)
T COG0387 218 SVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGA--PPAFVGLI 261 (368)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHH
Confidence 334445555555566666666677778888899998 66655543
No 361
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=20.28 E-value=2.5e+02 Score=20.12 Aligned_cols=18 Identities=17% Similarity=0.471 Sum_probs=9.3
Q ss_pred chHHHHHHHHHHHHHHHH
Q 009250 153 CRRTFQIDTIPLILGAII 170 (539)
Q Consensus 153 rr~~l~~~~~~~~~~~~~ 170 (539)
||...++|-++++++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 455555555555555444
No 362
>PRK11715 inner membrane protein; Provisional
Probab=20.16 E-value=5.5e+02 Score=25.52 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=13.8
Q ss_pred hhhHHHHhhhcCCchhhHhhHHHHHHH
Q 009250 383 ALCASYLMDKEGRQKLLIGSYLGMAIS 409 (539)
Q Consensus 383 ~~~~g~l~dr~g~r~~~~~~~~~~~~~ 409 (539)
.+.+=++.+...++++..+=.++.+++
T Consensus 314 TF~~fFlfE~~~~~~iHpiQYlLVGlA 340 (436)
T PRK11715 314 TFAAFFLFELLKKLRIHPVQYLLVGLA 340 (436)
T ss_pred HHHHHHHHHHhcCceecHHHHHHHHHH
Confidence 444445667766666544433333333
Done!