BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009255
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/510 (54%), Positives = 377/510 (73%), Gaps = 20/510 (3%)
Query: 4 FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
F PDNVTYNTIL A+ KKG+L+++++LL DMKK GLVPNR TYN LV GYCKLG LKE
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 64 AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
A ++V+LM Q LPD+ TYN+LING CNAG + E L M+SLKL PDVVTYNTLI+
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFS 182
FE G S+EA KL+++++ G+K N VTHNI +KW CKE K + + V+ + + +GFS
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
PD VTY+TLI A K G++ A MM MG+KG+KMNTITLNTIL LC E+KLDEA+ L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
LNSA KRG+ +DEV+YGTLI G+FR+EK +AL++WDEMK+ +I P+ T+N++I GL
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
GKTE A++ +EL +SG++PD++TFN+II G+C EG+VEKA +F+N+ ++ SFKPD T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
CNILL+GLC+EG+ EKAL FF + I + + VD+VTYNT+IS+ CK+++L++A+ LLSEME
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLI-EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA----QKFTS--------IMVETGKINHQVVQPN 470
EK L PDR+TY + + L+E G+L E +KF+ + VET K P
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEK------NPA 706
Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
TS++ EE++ +I+YS+ I+E CS+GR K+
Sbjct: 707 TSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 275/530 (51%), Gaps = 23/530 (4%)
Query: 8 PDNVTYNTILDALFK---KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
P+ +T NT+L L + ++ R++ DM K G+ N T+N+LV+GYC G L++A
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 65 MRVVDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
+ +++ M ++ K PD TYN ++ G L + L +M+ L+P+ VTYN L+
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
+ + G EAF++++ + + + P+ T+NI+I C G + + +++ M+ P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
D VTYNTLID + G EA ++M+ M G+K N +T N L LC E+K + +
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 244 NS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
G+ D V+Y TLI Y + + AL++ EM ++ I +T T N ++ L +
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
K ++A ++LN + G I DE T+ T+I GF E +VEKAL+ ++M + P + T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
N L+ GLC G E A++ F G D T+N++I CKE R+E AF +E
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
+ PD YT + L + G E+A F + ++E +++ +
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD------------------T 625
Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
++Y+ I+ C + K+A + E +KG+ ++ TY + ++ L++ K
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 227/457 (49%), Gaps = 22/457 (4%)
Query: 78 PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL---INRFFESGRSMEA 134
P +++ ++ + + G A ++ ++M LKL P+++T NTL + R+ S A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLID 193
++ D++ + G+ N T N+++ YC EGK++ A ++ M E +PD VTYNT++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
A K G + + ++ M + GL N +T N +++ C L EA+ ++ +
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
D +Y LI G L+L D MK ++ P TYN +I G + G + +A ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIVTCNILLSGLCR 372
++ G+ ++ T N + C E + E + ++V+ F PDIVT + L+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
G L AL+ R KG ++++T NT++ +LCKER+L++A LL+ ++ D T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
Y T ++ R E+ +K + E K+ +I P+ +++ I
Sbjct: 489 YG---TLIMGFFREEKVEKALEMWDEMKKV--------------KITPTVSTFNSLIGGL 531
Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
C G+ + A++ F+E + G+ + ST+ +++ G K
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 3/270 (1%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M GF PD VTY+T++ A K G L+ +++ +M ++G+ N T N ++ CK
Sbjct: 409 MHGFS--PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA +++ + + D TY LI G+ +E+A + EM+ +K+ P V T+N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI G++ A + DEL E G+ P+ T N +I YCKEG+++KA + ++
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
F PD T N L++ CK G E+A + + + +++T+T NT++ C +KKL EAY
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAY 645
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
LL+ ++G D +Y + I+ D K
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 306 TEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
++ ++ + N LL + P + F+ + + EG+ ALQ KM+ KP+++
Sbjct: 108 SDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLL 167
Query: 362 TCNILLSGLCR---EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
TCN LL GL R + A + F + G +++ T+N L++ C E +LEDA G+L
Sbjct: 168 TCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227
Query: 419 SEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
M E K+ PD TY I A+ + GRL + ++ M + G +
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV--------------- 272
Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
P+ ++Y+ + +C G K+A QI E +Q + + TY L+NGL
Sbjct: 273 --PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 263/471 (55%), Gaps = 14/471 (2%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M GC+P++V Y T++ +L K ++NE LL +M G VP+ T+N ++ G CK
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA----FRLRKEMESLKLLPDVV 116
+ EA ++V+ M PD TY L+NG C G ++ A +R+ K P++V
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--------PEIV 354
Query: 117 TYNTLINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
+NTLI+ F GR +A ++ D + +GI P+ T+N +I Y KEG + A +++ +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
M G P+ +Y L+D CK G ++EA+ +++ M GLK NT+ N ++ C E +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
+ EA + ++G D ++ +LI+G ++ AL L +M ++ +T TYN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
+I + G+ ++A ++NE++ G DE T+N++I G C G+V+KA KM+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
P ++CNIL++GLCR G++E+A++F + +L+G D VT+N+LI+ LC+ R+ED
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NHQ 465
+ +++ + + PD T+ + + L + G + +A +E G + NH+
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 257/510 (50%), Gaps = 31/510 (6%)
Query: 43 PNRTTYN----ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
P +YN ILVSG C K A V M K P ++T+ +++ +C ++
Sbjct: 180 PTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 99 AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
A L ++M +P+ V Y TLI+ + R EA +L++E+ G P+A T N +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
CK +I++A K+V M GF+PD +TY L++ CK G ++ A D+ R K
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA---KDLFYRIP-KP 351
Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
+ NT++H +LD+A +L+ + G D +Y +LI GY+++ AL++
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
+M+ + P+ ++Y ++ G + GK ++A ++LNE+ G+ P+ FN +I FC
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
E ++ +A++ +M K KPD+ T N L+SGLC ++ AL R I +G ++VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
YNTLI++ + +++A L++EM + D TY ++ L +G +++A+ M+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 458 ETGK----------IN--------HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
G IN + V+ P ++++ IN C GR +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
D L +F + + +GI + T+ LM+ L K
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 239/496 (48%), Gaps = 30/496 (6%)
Query: 47 TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN---GWCNAGMLEEAFRLR 103
Y +L+ KLG E + L+ Q K V+ ++ I+ + AG + RL
Sbjct: 113 VYQVLIG---KLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 104 KEMESL-KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
EM ++ P +YN ++ A + ++ I P T +++K +C
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
+ID A ++R+M ++G P+ V Y TLI + K + EA ++++ M G + T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
N ++ LC +++EA ++N RG+ D+++YG L+ G + + + A L+ +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQV 341
+ P +N +I G G+ + A +L++++ S G++PD T+N++I+G+ EG V
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
AL+ + M K KP++ + IL+ G C+ G +++A G ++V +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
IS+ CKE R+ +A + EM K PD YT+ ++ + L E ++ A M+ G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
+ ++++Y+ IN +G K+A ++ E +G +++ TY
Sbjct: 526 V-----------------ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 522 NLMNGLIKRRKSISKA 537
+L+ GL R + KA
Sbjct: 569 SLIKGLC-RAGEVDKA 583
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 186/346 (53%), Gaps = 1/346 (0%)
Query: 4 FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
+G +PD TYN+++ +K+G + ++L DM+ +G PN +Y ILV G+CKLG + E
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 64 AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
A V++ M+ + P+ +N LI+ +C + EA + +EM PDV T+N+LI+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
E A L+ ++ G+ N VT+N +I + + G+I +A K+V M G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
D +TYN+LI C+AG +++A + + M R G + I+ N +++ LC ++EA
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
RG D V++ +LI G R + L ++ +++ I P T T+N ++ L +
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
G A +L+E ++ G +P+ T++ ++ + +++ +F+N
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR-RFYN 727
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 160/297 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M GC P+ +Y ++D K GK++E ++L++M GL PN +N L+S +CK
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ EA+ + M + PDV+T+N LI+G C ++ A L ++M S ++ + VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F G EA KL++E+ G + +T+N +IK C+ G++DKA + M +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P ++ N LI+ C++G +EEA M +G + +T N++++ LC ++++
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
+ G D V++ TL++ + A L DE E +P+ T++ ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 3/426 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
+EG G +PD +TYN ++ K G++N + LS + + + P+ TYN ++ C G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
LK+AM V+D M Q PDV TY +LI C + A +L EM PDVVTYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+N + GR EA K ++++ G +PN +THNI+++ C G+ A K++ +M G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
FSP VT+N LI+ C+ G + A +++ M + G + N+++ N +LH C EKK+D A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L RG Y D V+Y T++T +D K A+++ +++ + P TYN +I GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+++GKT +AI +L+E+ + PD T+++++ G EG+V++A++F ++ +P+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N ++ GLC+ ++A+ F I +G + +Y LI L E ++A LL+E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 421 MEEKKL 426
+ K L
Sbjct: 580 LCNKGL 585
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 246/445 (55%), Gaps = 3/445 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +PD + T++ + GK + +L ++ G VP+ TYN+++SGYCK G + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ V+D M+ + PDV TYN ++ C++G L++A + M PDV+TY LI
Sbjct: 192 LSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
A KL+DE+ + G P+ VT+N+++ CKEG++D+A K + +M +G P+
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+T+N ++ + C G +A +++ M RKG + +T N +++ LC + L A +L
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+ G + +SY L+ G+ +++K +RA++ + M R P TYN M+ L + G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K E A+++LN+L G P T+NT+I G G+ KA++ ++M K KPD +T +
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
L+ GL REG +++A+KFF + G ++VT+N+++ LCK R+ + A L M +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
P+ +Y + L G +EA
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEA 573
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 268/505 (53%), Gaps = 20/505 (3%)
Query: 9 DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
++V N L + + G+L E L +M G VP+ L+ G+C+LG ++A +++
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 69 DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
+++ + ++PDV TYN++I+G+C AG + A + ++ + + PDVVTYNT++ +S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDS 217
Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
G+ +A +++D + + P+ +T+ I+I+ C++ + A K++ M + G +PD VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
N L++ CK G ++EA + ++ M G + N IT N IL ++C + +A LL +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
+G+ V++ LI R RA+ + ++M + P++ +YN ++ G + K ++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
AI+ L ++ G PD T+NT++ C +G+VE A++ N++ K P ++T N ++
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
GL + G KA+K K D++TY++L+ L +E ++++A E E + P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
+ T+ +I L +S + + A F M+ G P+ SY+
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-----------------CKPNETSYTIL 560
Query: 489 INEHCSQGRYKDALQIFEETRQKGI 513
I +G K+AL++ E KG+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 22/442 (4%)
Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
V N + + +G E FK ++ + HG P+ + +I+ +C+ GK KA KI+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
+E +G PD +TYN +I CKAG + A ++D R + + +T NTIL +LC K
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGK 219
Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
L +A +L+ +R Y D ++Y LI RD A+KL DEM++R P TYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
++ G+ + G+ ++AI LN++ SG P+ T N I+ CS G+ A + M+ K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
F P +VT NIL++ LCR+G+L +A+ G +S++YN L+ CKE++++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNT 471
L M + PD TY + TAL + G++E+A + + + G I + V
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 472 SKT--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
+K +++ P +I+YS + +G+ +A++ F E + GI N
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 518 STYMNLMNGLIKRRKSISKAVD 539
T+ ++M GL K R++ +A+D
Sbjct: 520 VTFNSIMLGLCKSRQT-DRAID 540
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 180/323 (55%), Gaps = 2/323 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
M GC PD VTYN +++ + K+G+L+E L+DM G PN T+NI++ C G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
W+ + D++ + S P V T+N+LIN C G+L A + ++M P+ ++YN
Sbjct: 325 WMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
L++ F + + A + ++ + G P+ VT+N M+ CK+GK++ A +I+ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
G SP +TYNT+ID KAG +A +++D M K LK +TIT ++++ L E K+DEA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
+ + G + V++ +++ G + + +RA+ M R P+ +Y +I G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 300 LSQSGKTEQAIDMLNELLQSGMI 322
L+ G ++A+++LNEL G++
Sbjct: 564 LAYEGMAKEALELLNELCNKGLM 586
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 33/377 (8%)
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
F+ + V N + + G +EE F+ ++ M G + I T++ C K +A
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+L G D ++Y +I+GY + + N AL + D M + P TYN ++ L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSL 214
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
SGK +QA+++L+ +LQ PD T+ +I C + V A++ ++M ++ PD+
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N+L++G+C+EG L++A+KF G + +T+N ++ S+C R DA LL++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-SKTP---- 475
M K P T+ + L G L A M + G QPN+ S P
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHG 388
Query: 476 ----EEID---------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
+++D P ++Y+ + C G+ +DA++I + KG +
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 517 KSTYMNLMNGLIKRRKS 533
TY +++GL K K+
Sbjct: 449 LITYNTVIDGLAKAGKT 465
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/505 (29%), Positives = 262/505 (51%), Gaps = 19/505 (3%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
T N +++AL K GK+ +V LS ++++G+ P+ TYN L+S Y G ++EA +++ M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
P V+TYN +ING C G E A + EM L PD TY +L+ + G
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
+E K+ ++ + P+ V + M+ + + G +DKA +++E G PD V Y L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
I C+ G + A + + M ++G M+ +T NTILH LC K L EA L N ++R
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
+ D + LI G+ + A++L+ +MKE++I TYN ++ G + G + A +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+ +++ ++P +++ +++ CS+G + +A + ++M+ K+ KP ++ CN ++ G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PD 429
R G F I +G D ++YNTLI +E + AFGL+ +MEE++ G PD
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
+TY +I +++EA+ M+E G ++P +Y+ I
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERG-----------------VNPDRSTYTCMI 699
Query: 490 NEHCSQGRYKDALQIFEETRQKGIA 514
N SQ +A +I +E Q+G +
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 234/458 (51%), Gaps = 2/458 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD VTYNT++ A KG + E +L++ M +G P TYN +++G CK G + A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
V M ++ PD TY L+ C G + E ++ +M S ++PD+V ++++++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F SG +A + + E G+ P+ V + I+I+ YC++G I A + M + G + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYNT++ CK + EA ++ + M + L ++ TL ++ C L A L
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
++ LD V+Y TL+ G+ + + A ++W +M ++I+P+ +Y+ ++ L G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+A + +E++ + P N++I G+C G F KM+ + F PD ++ N
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 365 ILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
L+ G RE + KA + + G D TYN+++ C++ ++++A +L +M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
E+ + PDR TY + V L EA + M++ G
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 262/545 (48%), Gaps = 20/545 (3%)
Query: 6 CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
C ++ ++ ++ + KL E + + ++ +G + N L+ ++GW++ A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 66 RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
V ++++ +V+T N+++N C G +E+ +++ + PD+VTYNTLI+ +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
G EAF+L++ + G P T+N +I CK GK ++A ++ M +G SPD
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
TY +L+ CK G++ E ++ M + + + + ++++ LD+A M NS
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
+ G D V Y LI GY R + A+ L +EM ++ TYN ++ GL +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
+A + NE+ + + PD T +I G C G ++ A++ KM EK + D+VT N
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
LL G + G ++ A + + + K ++Y+ L+++LC + L +AF + EM K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----------KINHQVVQPNTSKT- 474
+ P ++ SG + + F M+ G I V + N SK
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 475 ------PEE---IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
EE + P +Y+ ++ C Q + K+A + + ++G+ ++STY ++N
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 526 GLIKR 530
G + +
Sbjct: 701 GFVSQ 705
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 172/357 (48%), Gaps = 39/357 (10%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
+PD V +++++ + G L++ + +K+ GL+P+ Y IL+ GYC+ G + AM
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
+ + M Q DV TYN +++G C ML EA +L EM L PD T LI+
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ G A +L ++ E I+ + VT+N ++ + K G ID A +I +M P +
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
+Y+ L++A C G++ EAFR+ D M K +K + N+++ C + L
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ--IMPSTFTYNAMIWG----- 299
G+ D +SY TLI G+ R+E ++A L +M+E Q ++P FTYN+++ G
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 300 -------------------------------LSQSGKTEQAIDMLNELLQSGMIPDE 325
+SQ TE A + +E+LQ G PD+
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE-AFRIHDEMLQRGFSPDD 727
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 39/399 (9%)
Query: 136 KLIDELDEH--GIKPNAVTHNIMIKWYCKEGKI-DKACKIVRNMEENGFSPDCVTYNTLI 192
+ +D+L H K +++ + MI + G++ D ++R + +G S + N+L
Sbjct: 97 RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIV-NSLD 155
Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
G+ + F ++ + T +KL EA+ +G+
Sbjct: 156 STFSNCGSNDSVFDLL------------------IRTYVQARKLREAHEAFTLLRSKGFT 197
Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
+ + LI R A ++ E+ + + +T N M+ L + GK E+
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
L+++ + G+ PD T+NT+I + S+G +E+A + N M K F P + T N +++GLC+
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK 317
Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
G E+A + F + G + DS TY +L+ CK+ + + + S+M + + PD
Sbjct: 318 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
++++ + SG L++A + + + E G I P ++ Y+ I +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI-----------------PDNVIYTILIQGY 420
Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
C +G A+ + E Q+G A++ TY +++GL KR+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 35/244 (14%)
Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
++ + +AMI L +SG+ A L +++ + N++ F + G +
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF--- 168
Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
D++ + + RE +A RS KG V N LI SL +
Sbjct: 169 ----------DLLIRTYVQARKLREA--HEAFTLLRS---KGFTVSIDACNALIGSLVRI 213
Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
+E A+G+ E+ +G + YT + AL + G++E+ F S + E G
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-------- 265
Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
+ P ++Y+ I+ + S+G ++A ++ KG + TY ++NGL
Sbjct: 266 ---------VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 529 KRRK 532
K K
Sbjct: 317 KHGK 320
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 280/568 (49%), Gaps = 75/568 (13%)
Query: 2 EGFGCLPDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
+ G +P ++YN +LDA + K ++ ++ +M + + PN TYNIL+ G+C G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ A+ + D M LP+V TYN LI+G+C +++ F+L + M L P++++YN
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+IN GR E ++ E++ G + VT+N +IK YCKEG +A + M +G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 181 FSPDCVTYNTLIDANCKAGN-----------------------------------MEEAF 205
+P +TY +LI + CKAGN M EA+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
R++ M G + +T N +++ C K+++A +L ++G D VSY T+++G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
R + AL++ EM E+ I P T TY+++I G + +T++A D+ E+L+ G+ PDE
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
T+ +I+ +C EG +EKALQ HN+MVEK PD+VT ++L++GL ++ +A +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
+ VTY+TLI + C + L+ G
Sbjct: 581 LFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIK-------------------GFCMKGM 620
Query: 446 LEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
+ EA Q F S++ GK NH+ P +Y+ I+ HC G + A +
Sbjct: 621 MTEADQVFESML---GK-NHK--------------PDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
++E + G ++ T + L+ L K K
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 246/453 (54%), Gaps = 18/453 (3%)
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDE 140
+++++ + ++++A + ++ +P V++YN +++ S R++ A + E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
+ E + PN T+NI+I+ +C G ID A + ME G P+ VTYNTLID CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
+++ F+++ M KGL+ N I+ N +++ LC E ++ E +L ++RGY LDEV+Y T
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
LI GY ++ ++AL + EM + PS TY ++I + ++G +A++ L+++ G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
+ P+E T+ T++ GF +G + +A + +M + F P +VT N L++G C G +E A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
KG + D V+Y+T++S C+ +++A + EM EK + PD TY+++
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
E R +EA M+ G + P +Y+ IN +C +G +
Sbjct: 496 CEQRRTKEACDLYEEMLRVG-----------------LPPDEFTYTALINAYCMEGDLEK 538
Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
ALQ+ E +KG+ + TY L+NGL K+ ++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 243/463 (52%), Gaps = 15/463 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME GCLP+ VTYNT++D K K+++ LL M +GL PN +YN++++G C+ G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+KE V+ M + D TYN LI G+C G +A + EM L P V+TY +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ ++G A + +D++ G+ PN T+ ++ + ++G +++A +++R M +NG
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
FSP VTYN LI+ +C G ME+A +++ M KGL + ++ +T+L C +DEA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ ++G D ++Y +LI G+ + A L++EM + P FTY A+I
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G E+A+ + NE+++ G++PD T++ +I+G + + +A + K+ + P
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 361 VT--------CNI-------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
VT NI L+ G C +G++ +A + F S + K D YN +I
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
C+ + A+ L EM + T A+ AL + G++ E
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P +TY +++ ++ K G +N + L M+ +GL PN TY LV G+ + G++ EA
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
RV+ M N P V TYN LING C G +E+A + ++M+ L PDVV+Y+T+++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F S EA ++ E+ E GIKP+ +T++ +I+ +C++ + +AC + M G PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL----------------- 227
TY LI+A C G++E+A ++ + M KG+ + +T + ++
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 228 --------------HTL-------------------CCEKKLDEAYMLLNSASKRGYYLD 254
HTL C + + EA + S + + D
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
+Y +I G+ R +A L+ EM + + T T A++ L + GK + ++
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
+L+S + + ++ EG ++ L +M + F P+ ++
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 269 bits (687), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 261/520 (50%), Gaps = 19/520 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P++VTY+ ++D ++GKL+ L +M GL + YN L++G+CK G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ A + M K P V TY L+ G+C+ G + +A RL EM + P + T+ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L++ F +G +A KL +E+ E +KPN VT+N+MI+ YC+EG + KA + ++ M E G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD +Y LI C G EA +D + + ++N I +LH C E KL+EA
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ +RG LD V YG LI G + + L EM +R + P Y +MI
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
S++G ++A + + ++ G +P+E T+ +I+G C G V +A +KM S P+
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 361 VTCNILLSGLCREGI-LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
VT L L + + ++KA++ + ILKG ++ TYN LI C++ R+E+A L++
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNA-ILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
M + PD TY + L +++A + + M E G I
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG-----------------IR 854
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
P ++Y+ I+ C G A ++ E ++G+ N T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 267/539 (49%), Gaps = 17/539 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME GC + V YN ++D L KK K+ E + D+ + L P+ TY LV G CK+
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ + ++D M + P + L+ G G +EEA L K + + P++ YN
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ + + EA L D + + G++PN VT++I+I +C+ GK+D A + M + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
YN+LI+ +CK G++ A M M K L+ +T +++ C + K+++A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L + + +G ++ TL++G FR A+KL++EM E + P+ TYN MI G
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ G +A + L E+ + G++PD ++ +IHG C GQ +A F + + + + + +
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+ LL G CREG LE+AL + + +G +D V Y LI K + + FGLL E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ L PD Y ++ A ++G +EA +M+ G + P
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-----------------P 715
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
+ ++Y+ IN C G +A + + + N+ TY ++ L K + KAV+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 237/496 (47%), Gaps = 17/496 (3%)
Query: 36 MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
+ K L+P T + L+ G K AM + + M PDV+ Y +I C
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L A + ME+ ++V YN LI+ + + EA + +L +KP+ VT+
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
++ CK + + +++ M FSP ++L++ K G +EEA ++ + G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
+ N N ++ +LC +K EA +L + K G ++V+Y LI + R K + AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
EM + + S + YN++I G + G A + E++ + P T+ +++ G+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
CS+G++ KAL+ +++M K P I T LLSGL R G++ A+K F +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
VTYN +I C+E + AF L EM EK + PD Y+Y + L +G+ EA+ F
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
+ H+ + + I Y+ ++ C +G+ ++AL + +E Q+G+ +
Sbjct: 603 L-------HK----------GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 516 NKSTYMNLMNGLIKRR 531
+ Y L++G +K +
Sbjct: 646 DLVCYGVLIDGSLKHK 661
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 218/433 (50%), Gaps = 37/433 (8%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P VTY +++ KGK+N+ L +M +G+ P+ T+ L+SG + G +++A+++
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + P+ TYN++I G+C G + +AF KEM ++PD +Y LI+
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI--------------- 172
+G++ EA +D L + + N + + ++ +C+EGK+++A +
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 173 --------------------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
++ M + G PD V Y ++IDA K G+ +EAF + D+M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE-KA 271
+G N +T +++ LC ++EA +L + ++V+YG + + E
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+A++L + + + ++ +T TYN +I G + G+ E+A +++ ++ G+ PD T+ T+
Sbjct: 770 QKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
I+ C V+KA++ N M EK +PD V N L+ G C G + KA + + +G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 392 AVDSVTYNTLISS 404
++ T T S+
Sbjct: 889 IPNNKTSRTTTSN 901
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD+V Y +++DA K G E + M +G VPN TY +++G CK G+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM-LEEAFRLRKEMESLK-LLPDVVTY 118
+ EA + M S+P+ TY ++ + +++A L + LK LL + TY
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI--LKGLLANTATY 790
Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
N LI F GR EA +LI + G+ P+ +T+ MI C+ + KA ++ +M E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
G PD V YNTLI C AG M +A + + M R+GL N T T
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 269/525 (51%), Gaps = 21/525 (4%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP V +N +L A+ K K + V L M+ + + +YNIL++ +C+ L A+
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
V+ M + PD+ T + L+NG+C+ + EA L +M ++ P+ VT+NTLI+ F
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA LID + G +P+ T+ ++ CK G ID A +++ ME+ D V
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
Y T+IDA C N+ +A + M KG++ N +T N+++ LC + +A LL+
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R + V++ LI + ++ K A KL+DEM +R I P FTY+++I G +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ P+ T+NT+I GFC +VE+ ++ +M ++ + VT N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ GL + G + A K F+ + G D +TY+ L+ LCK +LE A + +++ K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
PD YTY + + ++G++E+ + G V+PN I Y+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------IIYT 539
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
I+ C +G ++A +F E ++ G N TY N LI+ R
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTY----NTLIRAR 580
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 237/444 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD VT +++L+ +++E L+ M PN T+N L+ G
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ ++D M PD++TY ++NG C G ++ A L K+ME K+ DVV Y T
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ +A L E+D GI+PN VT+N +I+ C G+ A +++ +M E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT++ LIDA K G + EA ++ D M ++ + + T +++++ C +LDEA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + + V+Y TLI G+ + ++ ++L+ EM +R ++ +T TYN +I GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+G + A + +++ G+ PD T++ ++ G C G++EKAL + + +PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ G+C+ G +E F S LKG + + Y T+IS C++ E+A L E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
M+E P+ TY + A + G
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDG 584
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 233/442 (52%), Gaps = 1/442 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ VT+NT++ LF K +E L+ M +G P+ TY +V+G CK G + A+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + K DV Y +I+ CN + +A L EM++ + P+VVTYN+LI
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
GR +A +L+ ++ E I PN VT + +I + KEGK+ +A K+ M + PD T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y++LI+ C ++EA M ++M K N +T NT++ C K+++E L S
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+RG + V+Y TLI G F+ + A K++ +M + P TY+ ++ GL + GK E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+A+ + L +S M PD T+N +I G C G+VE + K KP+++ ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
SG CR+G+ E+A FR G +S TYNTLI + ++ + L+ EM
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 428 PDRYTYAAIHTALVESGRLEEA 449
D T + + ++ GRLE++
Sbjct: 603 GDASTISMV-INMLHDGRLEKS 623
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 17/472 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M Q++ LP + +N L++ + L + M++L++ D+ +YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + A ++ ++ + G +P+ VT + ++ YC +I +A +V M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ P+ VT+NTLI EA ++D M +G + + T T+++ LC +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL K D V Y T+I + N AL L+ EM + I P+ TYN++I L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G+ A +L+++++ + P+ TF+ +I F EG++ +A + +++M+++S PDI
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T + L++G C L++A F I K + VTYNTLI CK +R+E+ L E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ L + TY + L ++G + AQK MV G + P
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-----------------VPP 463
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
I+YS ++ C G+ + AL +FE ++ + + TY ++ G+ K K
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 1/415 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M GC PD TY T+++ L K+G ++ LL M+K + + Y ++ C
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ +A+ + M P+V TYN LI CN G +A RL +M K+ P+VVT++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F + G+ +EA KL DE+ + I P+ T++ +I +C ++D+A + M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ VTYNTLI CKA +EE + M ++GL NT+T NT++ L D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ G D ++Y L+ G + K +AL +++ +++ ++ P +TYN MI G+
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++GK E D+ L G+ P+ + T+I GFC +G E+A +M E P+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
T N L+ R+G + + + G D+ T + +I+ L + RLE ++
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 173/368 (47%), Gaps = 17/368 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D A + M ++ P V +N L+ A K + + + M + + + N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
+++ C +L A +L K GY D V+ +L+ GY ++ + A+ L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
+ P+T T+N +I GL K +A+ +++ ++ G PD T+ T+++G C G ++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L KM + + D+V ++ LC + AL F KG + VTYN+LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M E+K+ P+ T++A+ A V+ G+L EA+K M++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 353
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
IDP +YS IN C R +A +FE K N TY L+
Sbjct: 354 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 525 NGLIKRRK 532
G K ++
Sbjct: 403 KGFCKAKR 410
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 141/311 (45%), Gaps = 25/311 (8%)
Query: 247 SKRGYYLDEVSYG---TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
S RG Y SY L D K + A+ L+ EM + + +PS +N ++ +++
Sbjct: 34 SLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM 93
Query: 304 GKTEQAIDMLNELLQSGMIP-DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
K + I L E +Q+ I D ++N +I+ FC Q+ AL KM++ ++PDIVT
Sbjct: 94 NKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
+ LL+G C + +A+ + ++VT+NTLI L + +A L+ M
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------- 471
+ PD +TY + L + G ++ A M E GKI VV T
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNV 271
Query: 472 --------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
+ I P+ ++Y+ I C+ GR+ DA ++ + ++ I N T+ L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 524 MNGLIKRRKSI 534
++ +K K +
Sbjct: 332 IDAFVKEGKLV 342
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 272/536 (50%), Gaps = 19/536 (3%)
Query: 3 GFGCLPD-NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
GF D N++Y L + K ++ DL DM + +P +N L S K
Sbjct: 45 GFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 62 KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
+ + + M ++T +++IN +C L AF ++ L PD V +NTL
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
+N R EA +L+D + E G KP +T N ++ C GK+ A ++ M E GF
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
P+ VTY +++ CK+G A ++ M + +K++ + + I+ LC + LD A+
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
L N +G+ D ++Y TLI G+ + + KL +M +R+I P+ T++ +I
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
+ GK +A +L E++Q G+ P+ T+N++I GFC E ++E+A+Q + M+ K PDI+
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
T NIL++G C+ ++ L+ FR L+G ++VTYNTL+ C+ +LE A L EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
+++ PD +Y + L ++G LE+A + GKI K+ E+D
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEI------FGKI---------EKSKMELDIG 509
Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
Y I+ C+ + DA +F KG+ ++ Y N+M + R+ S+SKA
Sbjct: 510 --IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY-NIMISELCRKDSLSKA 562
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 235/426 (55%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD V +NT+L+ L + +++E +L+ M + G P T N LV+G C G + +A+ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M + P+ TY ++N C +G A L ++ME + D V Y+ +I+ +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G AF L +E++ G K + +T+N +I +C G+ D K++R+M + SP+ VT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
++ LID+ K G + EA +++ M ++G+ NTIT N+++ C E +L+EA +++
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+G D +++ LI GY + + + L+L+ EM R ++ +T TYN ++ G QSGK E
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
A + E++ + PD ++ ++ G C G++EKAL+ K+ + + DI I++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
G+C ++ A F S LKG +D+ YN +IS LC++ L A L +M E+
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 428 PDRYTY 433
PD TY
Sbjct: 576 PDELTY 581
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 237/442 (53%), Gaps = 1/442 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P +T NT+++ L GK+++ L+ M + G PN TY +++ CK G AM +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + D Y+++I+G C G L+ AF L EME D++TYNTLI F
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
+GR + KL+ ++ + I PN VT +++I + KEGK+ +A ++++ M + G +P+ +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
YN+LID CK +EEA +M+D+M KG + +T N +++ C ++D+ L S
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
RG + V+Y TL+ G+ + K A KL+ EM R++ P +Y ++ GL +G+ E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+A+++ ++ +S M D + IIHG C+ +V+ A + K K D NI++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
S LCR+ L KA FR +G A D +TYN LI + + A L+ EM+
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 428 PDRYTYAAIHTALVESGRLEEA 449
D T + L SG L+++
Sbjct: 611 ADVSTVKMVINML-SSGELDKS 631
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 256/527 (48%), Gaps = 17/527 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G T + +++ + KL+ + + K G P+ +N L++G C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ EA+ +VD M + P + T N L+NG C G + +A L M P+ VTY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
++N +SG++ A +L+ +++E IK +AV ++I+I CK+G +D A + ME G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
F D +TYNTLI C AG ++ +++ M ++ + N +T + ++ + E KL EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL +RG + ++Y +LI G+ ++ + A+++ D M + P T+N +I G
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++ + + +++ E+ G+I + T+NT++ GFC G++E A + +MV + +PDI
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
V+ ILL GLC G LEKAL+ F +D Y +I +C +++DA+ L
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
+ K + D Y + + L L +A M E G P
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-----------------P 576
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
++Y+ I H A ++ EE + G + ST ++N L
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 179/308 (58%), Gaps = 2/308 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ VT++ ++D+ K+GKL E LL +M ++G+ PN TYN L+ G+CK L+EA+++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
VDLM PD+ T+N+LING+C A +++ L +EM ++ + VTYNTL+ F +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
SG+ A KL E+ ++P+ V++ I++ C G+++KA +I +E++ D
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y +I C A +++A+ + + KG+K++ N ++ LC + L +A +L +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+ G+ DE++Y LI + D+ A A +L +EMK P+ + M+ + SG+ +
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELD 629
Query: 308 QA-IDMLN 314
++ +DML+
Sbjct: 630 KSFLDMLS 637
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 248/465 (53%), Gaps = 3/465 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M +G +PD T+ T++ ++G L+ + M + G + + N++V G+CK G
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 61 LKEAMRVVDLMT-QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
+++A+ + M+ Q+ PD +T+N L+NG C AG ++ A + M PDV TYN
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
++I+ + G EA +++D++ PN VT+N +I CKE ++++A ++ R +
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
G PD T+N+LI C N A + + M KG + + T N ++ +LC + KLDEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
+L G ++Y TLI G+ + K A +++DEM+ + ++ TYN +I G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
L +S + E A ++++++ G PD+ T+N+++ FC G ++KA M +PD
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
IVT L+SGLC+ G +E A K RS +KG + YN +I L ++R+ +A L
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 420 EM-EEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
EM E+ + PD +Y + L G + EA F ++E G +
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 270/549 (49%), Gaps = 21/549 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
++ FG PD YN +L+ L L V + M G+ P+ +T+N+L+ C+
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L+ A+ +++ M +PD T+ ++ G+ G L+ A R+R++M V+ N
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 121 LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
+++ F + GR +A I E+ ++ G P+ T N ++ CK G + A +I+ M +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
G+ PD TYN++I CK G ++EA ++D M + NT+T NT++ TLC E +++EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
L + +G D ++ +LI G A++L++EM+ + P FTYN +I
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
L GK ++A++ML ++ SG T+NT+I GFC + +A + ++M +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
VT N L+ GLC+ +E A + I++G+ D TYN+L++ C+ ++ A ++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETGKINHQVVQP------NTS 472
M PD TY + + L ++GR+E A K SI ++ + P
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 473 KTPEEID------------PSSISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKST 519
KT E I+ P ++SY C+ G ++A+ E +KG S+
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Query: 520 YMNLMNGLI 528
L GL+
Sbjct: 685 LYMLAEGLL 693
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 261/549 (47%), Gaps = 26/549 (4%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ Y IL L + G ++++ +L DMK +T+ IL+ Y + E + V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 68 VDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
VD M L PD YN ++N + L+ +M + PDV T+N LI
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ + A +++++ +G+ P+ T +++ Y +EG +D A +I M E G S V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
+ N ++ CK G +E+A + M + G + T NT+++ LC + A +++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
+ GY D +Y ++I+G + + A+++ D+M R P+T TYN +I L + +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
E+A ++ L G++PD TFN++I G C A++ +M K +PD T N+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
L+ LC +G L++AL + L G A +TYNTLI CK + +A + EME
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INH----------- 464
+ + TY + L +S R+E+A + M+ G+ + H
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
+VQ TS E P ++Y I+ C GR + A ++ + KGI + Y ++
Sbjct: 561 DIVQAMTSNGCE---PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 525 NGLIKRRKS 533
GL ++RK+
Sbjct: 618 QGLFRKRKT 626
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 229/451 (50%), Gaps = 39/451 (8%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD T+NT+++ L K G + +++ M ++G P+ TYN ++SG CKLG +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ V+D M P+ TYN LI+ C +EEA L + + S +LPDV T+N+LI
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ A +L +E+ G +P+ T+N++I C +GK+D+A +++ ME +G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+TYNTLID CKA EA + D M G+ N++T NT++ LC +++++A L++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 245 -----------------------------------SASKRGYYLDEVSYGTLITGYFRDE 269
+ + G D V+YGTLI+G +
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTF 328
+ A KL ++ + I + YN +I GL + KT +AI++ E+L Q+ PD ++
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 329 NTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
+ G C+ G + +A+ F +++EK F P+ + +L GL + E +K +
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709
Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
K + + +++ L K R+ +DA L
Sbjct: 710 QKARFSEEEV--SMVKGLLKIRKFQDALATL 738
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 127/332 (38%), Gaps = 90/332 (27%)
Query: 274 ALKLWD-EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
AL+L++ K+ P Y ++ L +SG + +L ++ S +TF +I
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 333 HGFCS----------------EGQVEKALQFHNKM------------VEKS--------F 356
+ E ++ F+N+M VE S
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 357 KPDIVTCNILLSGLCR-----------------------------------EGILEKALK 381
KPD+ T N+L+ LCR EG L+ AL+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTAL 440
+ G + +V+ N ++ CKE R+EDA + EM + PD+YT+ + L
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
++G ++ A + +M++ G DP +Y+ I+ C G K+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEG-----------------YDPDVYTYNSVISGLCKLGEVKE 348
Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
A+++ ++ + + N TY L++ L K +
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 275/532 (51%), Gaps = 21/532 (3%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD TY ++ + G+L+ L ++ K+G + + L+ G C +AM +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 68 V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
V MT+ +P+V++YN+L+ G C+ +EA L M + PDVV+Y T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
FF+ G S +A+ E+ + GI P+ VT+N +I CK +DKA +++ M +NG P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
DC+TYN+++ C +G +EA + M G++ + +T + ++ LC + EA +
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
+S +KRG + +YGTL+ GY L D M I P + ++ +I ++
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
GK +QA+ + +++ Q G+ P+ T+ +I C G+VE A+ + +M+++ P +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
N L+ GLC E+A + + +G ++++ +N++I S CKE R+ ++ L M
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
+ P+ TY + +G+++EA K S MV G + P+++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-----------------LKPNTV 547
Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
+YS IN +C R +DAL +F+E G++ + TY ++ GL + R++ +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 269/533 (50%), Gaps = 18/533 (3%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G LPD VTYN+I+ AL K +++ ++L+ M K G++P+ TYN ++ GYC G KEA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ + M + PDV TY++L++ C G EA ++ M L P++ TY TL+
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ G +E L+D + +GI P+ +I+I Y K+GK+D+A + M + G +P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTY +I CK+G +E+A + M +GL I N+++H LC K + A L+
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
RG L+ + + ++I + ++ + + KL++ M + P+ TYN +I G +G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K ++A+ +L+ ++ G+ P+ T++T+I+G+C ++E AL +M PDI+T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
I+L GL + A + + G ++ TYN ++ LCK + +DA + +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
L + T+ + AL++ GR +EA+ G + P+ +
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV-----------------PNYWT 688
Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
Y QG ++ Q+F G ++ S +N + + +R I++A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVD-SGMLNFIVRELLQRGEITRA 740
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 272/532 (51%), Gaps = 20/532 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
M GC+P+ +YN +L L + + E +LL +D + G P+ +Y +++G+ K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
G +A M LPDV TYN +I C A +++A + M ++PD +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
YN++++ + SG+ EA + ++ G++P+ VT+++++ + CK G+ +A KI +M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
+ G P+ TY TL+ G + E ++D+M R G+ + + ++ + K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
+A ++ + ++G + V+YG +I + + A+ +++M + + P YN++I
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
GL K E+A +++ E+L G+ + FN+II C EG+V ++ + MV K
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
P+++T N L++G C G +++A+K + G ++VTY+TLI+ CK R+EDA L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
EME + PD TY I L ++ R A++ + E+G +
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---------------Q 613
Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
I+ S +Y+ ++ C DALQ+F+ + + T+ +++ L+K
Sbjct: 614 IELS--TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 235/458 (51%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD VTY+ ++D L K G+ E R + M K+GL P TTY L+ GY G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L E ++DLM +N PD + +++LI + G +++A + +M L P+ VTY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I +SGR +A +++ + G+ P + +N +I C K ++A +++ M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ + +N++ID++CK G + E+ ++ ++M R G+K N IT NT+++ C K+DEA
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL+ G + V+Y TLI GY + + AL L+ EM+ + P TYN ++ GL
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+ +T A ++ + +SG + +T+N I+HG C + ALQ + K +
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ L + G ++A F ++ G + TY + ++ + LE+ L
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
ME+ D I L++ G + A + S++ E
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 56/385 (14%)
Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
+PD TY LI C+AG ++ F + + +KG +++ I +L LC +K+ +A
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 241 ------------------------------------MLLNSASKR--GYYLDEVSYGTLI 262
+L A R G D VSY T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
G+F++ +++A + EM +R I+P TYN++I L ++ ++A+++LN ++++G++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
PD T+N+I+HG+CS GQ ++A+ F KM +PD+VT ++L+ LC+ G +A K
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
F S +G + TY TL+ + L + GLL M + PD Y ++ + A +
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383
Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
G++++A S M + G ++P++++Y I C GR +DA+
Sbjct: 384 QGKVDQAMLVFSKMRQQG-----------------LNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
FE+ +G++ Y +L++GL
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGL 451
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P+ +TYNT+++ GK++E LLS M GL PN TY+ L++GYCK+
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
+++A+ + M + PD+ TYN+++
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 88 --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
+G C + ++A ++ + + + L + T+N +I+ + GR+ EA L +G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
+ PN T+ +M + +G +++ ++ +ME+NG + D N ++ + G + A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 206 RMMDVMGRKGLKMNTITLNTILHTL 230
+ ++ K + T + + L
Sbjct: 742 TYLSMIDEKHFSLEASTASLFIDLL 766
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 268/525 (51%), Gaps = 21/525 (4%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P + ++ +L A+ K K + V L M+ G+ N TY+IL++ +C+ L A+
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
V+ M + P++ T + L+NG+C++ + EA L +M P+ VT+NTLI+ F
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA LID + G +P+ VT+ +++ CK G D A ++ ME+ P +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
YNT+ID CK +M++A + M KG++ N +T ++++ LC + +A LL+
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R D ++ LI + ++ K A KL+DEM +R I PS TY+++I G +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ PD T+NT+I GFC +VE+ ++ +M ++ + VT NIL
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ GL + G + A + F+ + G + +TYNTL+ LCK +LE A + ++ K+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
P YTY + + ++G++E+ + G + P ++Y+
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-----------------VKPDVVAYN 540
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
I+ C +G ++A +F+E ++ G N Y N LI+ R
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY----NTLIRAR 581
Score = 259 bits (662), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 243/460 (52%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P+ VT +++L+ +++E L+ M G PN T+N L+ G
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EAM ++D M PD+ TY +++NG C G + AF L +ME KL P V+ YNT
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ + +A L E++ GI+PN VT++ +I C G+ A +++ +M E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+PD T++ LIDA K G + EA ++ D M ++ + + +T +++++ C +LDEA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + D V+Y TLI G+ + ++ ++++ EM +R ++ +T TYN +I GL
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+G + A ++ E++ G+ P+ T+NT++ G C G++EKA+ + +P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ G+C+ G +E F + LKG D V YNT+IS C++ E+A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
M+E P+ Y + A + G E + + M G
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 1/445 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P+ VT+NT++ LF K +E L+ M +G P+ TY ++V+G CK G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+++ M Q K P V YN +I+G C +++A L KEME+ + P+VVTY++LI+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
GR +A +L+ ++ E I P+ T + +I + KEGK+ +A K+ M + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTY++LI+ C ++EA +M + M K + +T NT++ C K+++E +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S+RG + V+Y LI G F+ + A +++ EM + P+ TYN ++ GL ++G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K E+A+ + L +S M P T+N +I G C G+VE + K KPD+V N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
++SG CR+G E+A F+ G +S YNTLI + ++ E + L+ EM
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
D T + T ++ GRL+++
Sbjct: 601 GFAGDASTIGLV-TNMLHDGRLDKS 624
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 1/411 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC PD VTY +++ L K+G + +LL+ M++ L P YN ++ G CK + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ + M P+V TY+ LI+ CN G +A RL +M K+ PDV T++ LI+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F + G+ +EA KL DE+ + I P+ VT++ +I +C ++D+A ++ M PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYNTLI CK +EE + M ++GL NT+T N ++ L D A +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
G + ++Y TL+ G ++ K +A+ +++ ++ ++ P+ +TYN MI G+ ++G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K E D+ L G+ PD +NT+I GFC +G E+A +M E P+ N
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
L+ R+G E + + + G A D+ T L++++ + RL+ +F
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 237/472 (50%), Gaps = 17/472 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ P + ++ L++ + L ++M++L + + TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + A ++ ++ + G +PN VT + ++ YC +I +A +V M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ P+ VT+NTLI EA ++D M KG + + +T +++ LC D A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LLN + + Y T+I G + + + AL L+ EM+ + I P+ TY+++I L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G+ A +L+++++ + PD TF+ +I F EG++ +A + +++MV++S P I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT + L++G C L++A + F + K D VTYNTLI CK +R+E+ + E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ L + TY + L ++G + AQ+ MV G + P
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-----------------VPP 464
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+ ++Y+ ++ C G+ + A+ +FE ++ + TY ++ G+ K K
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 1/345 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G P+ VTY++++ L G+ ++ LLSDM ++ + P+ T++ L+ + K G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA ++ D M + P + TY+ LING+C L+EA ++ + M S PDVVTYNT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI F + R E ++ E+ + G+ N VT+NI+I+ + G D A +I + M +G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ +TYNTL+D CK G +E+A + + + R ++ T N ++ +C K+++ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L + S +G D V+Y T+I+G+ R A L+ EMKE +P++ YN +I
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
+ G E + +++ E+ G D +T ++ +G+++K+
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 17/370 (4%)
Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
E K+D A + M ++ P + ++ L+ A K + + + M G+ N T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
+ +++ C +L A +L K GY + V+ +L+ GY ++ + A+ L D+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
P+T T+N +I GL K +A+ +++ ++ G PD T+ +++G C G +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
A NKM + +P ++ N ++ GLC+ ++ AL F+ KG + VTY++LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
S LC R DA LLS+M E+K+ PD +T++A+ A V+ G+L EA+K MV+
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK---- 354
Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
IDPS ++YS IN C R +A Q+FE K + TY
Sbjct: 355 -------------RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 523 LMNGLIKRRK 532
L+ G K ++
Sbjct: 402 LIKGFCKYKR 411
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 143/302 (47%), Gaps = 17/302 (5%)
Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
E KLD+A L K + + + L++ + K + + L ++M+ I + +T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
Y+ +I + + A+ +L ++++ G P+ T +++++G+C ++ +A+ ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
++P+ VT N L+ GL +A+ + KG D VTY +++ LCK +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
AF LL++ME+ KL P Y I L + +++A M G
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG------------ 286
Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
I P+ ++YS I+ C+ GR+ DA ++ + ++ I + T+ L++ +K K
Sbjct: 287 -----IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 533 SI 534
+
Sbjct: 342 LV 343
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 254/515 (49%), Gaps = 18/515 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V ++ +L A+ K K + V L M+ G+ N TY+I ++ +C+ L A+
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T N L+NG+C+ + EA L +M + PD VT+ TL++ F
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ ++ EA L++ + G +P+ VT+ +I CK G+ D A ++ ME+ D V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
YNT+ID CK +M++AF + + M KG+K + T N ++ LC + +A LL+
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGK 305
++ D V + LI + ++ K A KL+DEM K + P YN +I G + +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
E+ +++ E+ Q G++ + T+ T+IHGF + A +MV PDI+T NI
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
LL GLC G +E AL F + +D VTY T+I +LCK ++ED + L + K
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
+ P+ TY + + G EEA M E G + P+S +Y
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-----------------PNSGTY 534
Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
+ I G + ++ +E R G A + ST+
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 227/448 (50%), Gaps = 4/448 (0%)
Query: 3 GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
G+G P VT N++L+ +++E L+ M + G P+ T+ LV G +
Sbjct: 140 GYG--PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 63 EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
EA+ +V+ M PD+ TY +ING C G + A L +ME K+ DVV YNT+I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
+ + +AF L ++++ GIKP+ T+N +I C G+ A +++ +M E +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYM 241
PD V +N LIDA K G + EA ++ D M + K + + NT++ C K+++E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
+ S+RG + V+Y TLI G+F+ + A ++ +M + P TYN ++ GL
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
+G E A+ + + + M D T+ T+I C G+VE + K KP++V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
T ++SG CR+G+ E+A F G +S TYNTLI + ++ + L+ EM
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEA 449
D T+ + T ++ GRL+++
Sbjct: 558 RSCGFAGDASTFGLV-TNMLHDGRLDKS 584
Score = 218 bits (555), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 221/445 (49%), Gaps = 1/445 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ G + TY+ ++ ++ +L+ +L M K G P+ T N L++G+C
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ EA+ +VD M + PD T+ L++G EA L + M PD+VTY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+IN + G A L++++++ I+ + V +N +I CK +D A + ME G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TYN LI C G +A R++ M K + + + N ++ E KL EA
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 241 MLLNSASKRGY-YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
L + K + + D V+Y TLI G+ + ++ ++++ EM +R ++ +T TY +I G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
Q+ + A + +++ G+ PD T+N ++ G C+ G VE AL M ++ K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
IVT ++ LC+ G +E F S LKG + VTY T++S C++ E+A L
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 420 EMEEKKLGPDRYTYAAIHTALVESG 444
EM+E P+ TY + A + G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 212/412 (51%), Gaps = 2/412 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD VT+ T++ LF+ K +E L+ M +G P+ TY +++G CK G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ +++ M + K DV YN +I+G C +++AF L +ME+ + PDV TYN LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-P 183
GR +A +L+ ++ E I P+ V N +I + KEGK+ +A K+ M ++ P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
D V YNTLI CK +EE + M ++GL NT+T T++H + D A M+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
G + D ++Y L+ G + AL +++ M++R + TY MI L ++
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
GK E D+ L G+ P+ T+ T++ GFC +G E+A +M E P+ T
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
N L+ R+G + + + G A D+ T+ L++++ + RL+ +F
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 239/506 (47%), Gaps = 18/506 (3%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
KL++ L DM K P+ ++ L+S K+ + + + M +++TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 85 MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
+ IN +C L A + +M L P +VT N+L+N F R EA L+D++ E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
G +P+ VT ++ + K +A +V M G PD VTY +I+ CK G + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
+++ M + ++ + + NTI+ LC K +D+A+ L N +G D +Y LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIP 323
+ + A +L +M E+ I P +NA+I + GK +A + +E+++S P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
D +NT+I GFC +VE+ ++ +M ++ + VT L+ G + + A F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
+ + G D +TYN L+ LC +E A + M+++ + D TY + AL ++
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
G++E+ + G + P+ ++Y+ ++ C +G ++A
Sbjct: 475 GKVEDGWDLFCSLSLKG-----------------VKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
+F E ++ G N TY L+ ++
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 229/471 (48%), Gaps = 18/471 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ P + ++ L++ + L ++M++L + ++ TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
IN F + A ++ ++ + G P+ VT N ++ +C +I +A +V M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD VT+ TL+ + EA +++ M KG + + +T +++ LC + D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LLN K D V Y T+I G + + + A L+++M+ + I P FTYN +I L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPD 359
G+ A +L+++L+ + PD FN +I F EG++ +A + +++MV+ K PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
+V N L+ G C+ +E+ ++ FR +G ++VTY TLI + R ++A +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
+M + PD TY + L +G +E A VV K ++D
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETA---------------LVVFEYMQKRDMKLD 460
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
++Y+ I C G+ +D +F KG+ N TY +M+G ++
Sbjct: 461 --IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 213/439 (48%), Gaps = 20/439 (4%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L++A L +M + P +V ++ L++ + + L +++ GI N T++I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
I ++C+ ++ A I+ M + G+ P VT N+L++ C + EA ++D M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
+ +T+T T++H L K EA L+ +G D V+YG +I G + + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
L ++M++ +I YN +I GL + + A D+ N++ G+ PD T+N +I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-- 393
C+ G+ A + + M+EK+ PD+V N L+ +EG L +A K + + K K
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV-KSKHCFP 354
Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
D V YNTLI CK +R+E+ + EM ++ L + TY + ++ + AQ
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
MV G + P ++Y+ ++ C+ G + AL +FE +++ +
Sbjct: 415 KQMVSDG-----------------VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 514 AINKSTYMNLMNGLIKRRK 532
++ TY ++ L K K
Sbjct: 458 KLDIVTYTTMIEALCKAGK 476
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 16/367 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D A + +M ++ P V ++ L+ A K + + + M G+ N T +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
++ C +L A +L K GY V+ +L+ G+ + + A+ L D+M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
P T T+ ++ GL Q K +A+ ++ ++ G PD T+ +I+G C G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L NKM + + D+V N ++ GLC+ ++ A F KG D TYN LIS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M EK + PD + A+ A V+ G+L EA+K MV++
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS----- 349
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
+ P ++Y+ I C R ++ +++F E Q+G+ N TY L+
Sbjct: 350 -----------KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 525 NGLIKRR 531
+G + R
Sbjct: 399 HGFFQAR 405
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 169/346 (48%), Gaps = 37/346 (10%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G PD TYN ++ L G+ ++ LLSDM ++ + P+ +N L+ + K G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 LKEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
L EA ++ D M ++K PDV YN LI G+C +EE + +EM L+ + VTY
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
TLI+ FF++ A + ++ G+ P+ +T+NI++ C G ++ A + M++
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
D VTY T+I+A CKAG +E+ + + + KG+K N +T
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT----------------- 498
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
Y T+++G+ R A L+ EMKE +P++ TYN +I
Sbjct: 499 ------------------YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
+ G + +++ E+ G D +TF ++ +G+++K+
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 126/236 (53%), Gaps = 1/236 (0%)
Query: 6 CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
C PD V YNT++ K ++ E ++ +M ++GLV N TY L+ G+ + A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 66 RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
V M + PD+ TYN+L++G CN G +E A + + M+ + D+VTY T+I
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
++G+ + + L L G+KPN VT+ M+ +C++G ++A + M+E+G P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
TYNTLI A + G+ + ++ M G + T + + L + +LD++++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSFL 586
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 20/288 (6%)
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
+D K + A+ L+ +M + + PS ++ ++ +++ K + I + ++ G+ +
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110
Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
T++ I+ FC Q+ AL KM++ + P IVT N LL+G C + +A+
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
+ G D+VT+ TL+ L + + +A L+ M K PD TY A+ L + G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 446 LEEAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYS 486
+ A + M E GKI VV NT + I P +Y+
Sbjct: 231 PDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
I+ C+ GR+ DA ++ + +K I + + L++ +K K +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 242/444 (54%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD VT N++L+ ++++ L+ M + G P+ T+N L+ G +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ +VD M PD+ TY +++NG C G ++ A L K+ME K+ P VV YNT
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ +A L E+D GI+PN VT+N +I+ C G+ A +++ +M E
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT++ LIDA K G + EA ++ D M ++ + + T +++++ C +LDEA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + + V+Y TLI G+ + ++ + ++L+ EM +R ++ +T TY +I G
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+ + + A + +++ G++PD T++ ++ G C+ G+VE AL + +PDI
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ G+C+ G +E F S LKG + VTY T++S C++ E+A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
M+E+ PD TY + A + G
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 242/449 (53%), Gaps = 1/449 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD+ T+NT++ LF+ + +E L+ M +G P+ TY I+V+G CK G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ A+ ++ M Q K P V YN +I+ CN + +A L EM++ + P+VVTYN+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI GR +A +L+ ++ E I PN VT + +I + KEGK+ +A K+ M +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TY++LI+ C ++EA M ++M K N +T NT++ C K++DE
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S+RG + V+Y TLI G+F+ + + A ++ +M ++P TY+ ++ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+GK E A+ + L +S M PD T+N +I G C G+VE + K KP++
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT ++SG CR+G+ E+A FR +G DS TYNTLI + ++ + L+ E
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
M + D T + T ++ GRL+++
Sbjct: 597 MRSCRFVGDASTIGLV-TNMLHDGRLDKS 624
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 265/523 (50%), Gaps = 17/523 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V ++ +L A+ K K + V L M+ G+ N TY+IL++ +C+ L A+
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
V+ M + PD+ T N L+NG+C+ + +A L +M + PD T+NTLI+ F
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
R+ EA L+D + G +P+ VT+ I++ CK G ID A +++ ME+ P V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
YNT+IDA C N+ +A + M KG++ N +T N+++ LC + +A LL+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R + V++ LI + ++ K A KL+DEM +R I P FTY+++I G +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ P+ T+NT+I GFC +V++ ++ +M ++ + VT L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G + + A F+ + G D +TY+ L+ LC ++E A + ++ K+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
PD YTY + + ++G++E+ + G V+PN ++Y+
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------VTYT 540
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
++ C +G ++A +F E +++G + TY L+ ++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 232/488 (47%), Gaps = 18/488 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ P + ++ L++ + L ++M++L + ++ TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + A ++ ++ + G +P+ VT N ++ +C +I A +V M E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD T+NTLI + EA ++D M KG + + +T +++ LC +D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL + V Y T+I + N AL L+ EM + I P+ TYN++I L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G+ A +L+++++ + P+ TF+ +I F EG++ +A + +++M+++S PDI
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T + L++G C L++A F I K + VTYNTLI CK +R+++ L E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP-------NTSK 473
M ++ L + TY + ++ + AQ MV G + + N K
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 474 TP-----------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
+++P +Y+ I C G+ +D +F KG+ N TY
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 523 LMNGLIKR 530
+M+G ++
Sbjct: 542 MMSGFCRK 549
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 17/368 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D A + +M ++ P V ++ L+ A K + + + M G+ N T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
+++ C +L A +L K GY D V+ +L+ G+ + + A+ L +M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
P +FT+N +I GL + + +A+ +++ ++ G PD T+ +++G C G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L KM + +P +V N ++ LC + AL F KG + VTYN+LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M E+K+ P+ T++A+ A V+ G+L EA+K M++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 354
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
IDP +YS IN C R +A +FE K N TY L+
Sbjct: 355 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 525 NGLIKRRK 532
G K ++
Sbjct: 404 KGFCKAKR 411
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
D K + A+ L+ +M + + PS ++ ++ +++ K + I + ++ G+ + T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
++ +I+ FC Q+ AL KM++ ++PDIVT N LL+G C + A+ +
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
G DS T+NTLI L + R +A L+ M K PD TY + L + G ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 448 EAQKFTSIMVETGKINHQVVQPN-------------------TSKTPEEIDPSSISYSEK 488
A M E GKI VV N T + I P+ ++Y+
Sbjct: 239 LALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
I C+ GR+ DA ++ + ++ I N T+ L++ +K K +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD TYN +++ + K GK+ + DL + +G+ PN TY ++SG+C+ G +EA +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
M + LPD TYN LI G + L +EM S + + D T L+
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLH 617
Query: 128 SGRSMEAF 135
GR ++F
Sbjct: 618 DGRLDKSF 625
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 264/507 (52%), Gaps = 18/507 (3%)
Query: 21 FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
FK+ D+ + +G+ P++TT NIL++ + ++ D++ + S PDV
Sbjct: 215 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDV 273
Query: 81 WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
+ + IN +C G +EEA +L +ME + P+VVT+NT+I+ GR EAF ++
Sbjct: 274 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333
Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
+ E G++P +T++I++K + +I A +++ M + GF P+ + YN LID+ +AG+
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
+ +A + D+M KGL + + T NT++ C + D A LL G+ +++ S+ +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
+I + AL+ EM R + P +I GL + GK +A+++ + L G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
+ D T N ++HG C G++++A + +++ + D V+ N L+SG C + L++A
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
F + +G D+ TY+ LI L ++E+A + + + PD YTY+ +
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
++ R EE Q+F M+ VQPNT + Y+ I +C GR
Sbjct: 634 CKAERTEEGQEFFDEMMSKN------VQPNT-----------VVYNHLIRAYCRSGRLSM 676
Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
AL++ E+ + KGI+ N +TY +L+ G+
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGM 703
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/562 (29%), Positives = 268/562 (47%), Gaps = 54/562 (9%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD + T ++A K GK+ E L S M++ G+ PN T+N ++ G G EA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ M + P + TY++L+ G A + +A+ + KEM P+V+ YN LI+
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--- 181
F E+G +A ++ D + G+ + T+N +IK YCK G+ D A ++++ M GF
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447
Query: 182 --------------------------------SPDCVTYNTLIDANCKAGNMEEAFRMMD 209
SP TLI CK G +A +
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507
Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
KG ++T T N +LH LC KLDEA+ + RG +D VSY TLI+G +
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 567
Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
K + A DEM +R + P +TY+ +I GL K E+AI ++ ++GM+PD T++
Sbjct: 568 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
+I G C + E+ +F ++M+ K+ +P+ V N L+ CR G L AL+ K
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES-GRLEE 448
G + +S TY +LI + R+E+A L EM + L P+ + Y TAL++ G+L +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY----TALIDGYGKLGQ 743
Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
K ++ E N + P+ I+Y+ I + G +A ++ E
Sbjct: 744 MVKVECLLREMHSKN--------------VHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 509 RQKGIAINKSTYMNLMNGLIKR 530
R+KGI + TY + G +K+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQ 811
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 259/527 (49%), Gaps = 28/527 (5%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P T N +L +L + + + + D+ +G+ P+ + ++ +CK G ++EA
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+++ M + P+V T+N +I+G G +EAF +++M + P ++TY+ L+
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ R +A+ ++ E+ + G PN + +N +I + + G ++KA +I M G S
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---- 240
TYNTLI CK G + A R++ M G +N + +++ LC D A
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 241 -MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
MLL + S G L TLI+G + K ++AL+LW + + + T T NA++ G
Sbjct: 473 EMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
L ++GK ++A + E+L G + D ++NT+I G C + ++++A F ++MV++ KPD
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
T +IL+ GL +E+A++F+ G D TY+ +I CK R E+
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
EM K + P+ Y + A SGRL A + M G I
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-----------------IS 690
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
P+S +Y+ I R ++A +FEE R +G+ N Y L++G
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 213/447 (47%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P+ + YN ++D+ + G LN+ ++ M +GL +TYN L+ GYCK G A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
R++ M + ++ +I C+ M + A R EM + P TLI+
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 492
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ G+ +A +L + G + T N ++ C+ GK+D+A +I + + G D
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
V+YNTLI C ++EAF +D M ++GLK + T + ++ L K++EA +
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+ G D +Y +I G + E+ + +DEM + + P+T YN +I +SG
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+ A+++ ++ G+ P+ T+ ++I G +VE+A +M + +P++
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
L+ G + G + K R K + +TY +I ++ + +A LL+EM EK
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
+ PD TY ++ G + EA K
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 216/426 (50%), Gaps = 24/426 (5%)
Query: 111 LLPDVVTYNTLIN---RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
+ P T N L+ R E + EAF ++ + G+ P+ I +CK GK++
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVE 290
Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
+A K+ MEE G +P+ VT+NT+ID G +EAF + M +G++ IT + ++
Sbjct: 291 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350
Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
L K++ +AY +L +K+G+ + + Y LI + N+A+++ D M + +
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
++ TYN +I G ++G+ + A +L E+L G ++ +F ++I CS + AL+F
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
+M+ ++ P L+SGLC+ G KAL+ + ++ KG VD+ T N L+ LC+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
+L++AF + E+ + DR +Y + + +L+EA F MV+ G
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG------- 583
Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
+ P + +YS I + + ++A+Q +++ ++ G+ + TY +++G
Sbjct: 584 ----------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 528 IKRRKS 533
K ++
Sbjct: 634 CKAERT 639
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 187/405 (46%), Gaps = 45/405 (11%)
Query: 32 LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
+ +M + + P L+SG CK G +A+ + + D T N L++G C
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529
Query: 92 NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
AG L+EAFR++KE+ + D V+YNTLI+ + EAF +DE+ + G+KP+
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589
Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
T++I+I K+++A + + + NG PD TY+ +ID CKA EE D M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649
Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
K ++ NT+ Y LI Y R +
Sbjct: 650 MSKNVQPNTVV-----------------------------------YNHLIRAYCRSGRL 674
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+ AL+L ++MK + I P++ TY ++I G+S + E+A + E+ G+ P+ + +
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
I G+ GQ+ K +M K+ P+ +T +++ G R+G + +A + KG
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
DS+TY I K+ + +AF G D YAAI
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAI 829
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%)
Query: 3 GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
G GC+ D V+YNT++ K KL+E L +M K+GL P+ TY+IL+ G + ++
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 63 EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
EA++ D +N LPDV+TY+++I+G C A EE EM S + P+ V YN LI
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
+ SGR A +L +++ GI PN+ T+ +IK ++++A + M G
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
P+ Y LID K G M + ++ M K + N IT ++ + + EA L
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785
Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
LN ++G D ++Y I GY + A K DE
Sbjct: 786 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 254/531 (47%), Gaps = 17/531 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G D T +++ +K KL +L K G P+ T++ LV+G+C G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ EA+ +VD M + K PD+ T + LING C G + EA L M PD VTY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
++NR +SG S A L +++E IK + V ++I+I CK+G D A + ME G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
D VTY++LI C G ++ +M+ M + + + +T + ++ E KL EA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L N RG D ++Y +LI G+ ++ + A +++D M + P TY+ +I
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++ + + + + E+ G+IP+ T+NT++ GFC G++ A + +MV + P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT ILL GLC G L KAL+ F + YN +I +C +++DA+ L
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
+ +K + PD TY + L + G L EA M E G P
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-----------------CTP 558
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
+Y+ I H ++++ EE + G + + ST +++ L RR
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 237/508 (46%), Gaps = 52/508 (10%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
K+N+ DL M + +P +N L S + + M N D++T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 85 MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
++IN +C L AF + L PD +T++TL+N F GR EA L+D + E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
+P+ VT + +I C +G++ +A ++ M E GF PD VTY +++ CK+GN A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
+ M + +K + + + ++ +LC + D+
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-------------------------- 263
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
AL L++EM+ + I TY+++I GL GK + ML E++ +IPD
Sbjct: 264 ---------ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
TF+ +I F EG++ +A + +N+M+ + PD +T N L+ G C+E L +A + F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
+ KG D VTY+ LI+S CK +R++D L E+ K L P+ TY + +SG
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
+L A++ MV G + PS ++Y ++ C G AL+I
Sbjct: 435 KLNAAKELFQEMVSRG-----------------VPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
FE+ ++ + + Y +++G+ K
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 218/415 (52%), Gaps = 1/415 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M +G PD VTY +L+ L K G DL M+++ + + Y+I++ CK G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+A+ + + M DV TY+ LI G CN G ++ ++ +EM ++PDVVT++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F + G+ +EA +L +E+ GI P+ +T+N +I +CKE + +A ++ M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD VTY+ LI++ CKA +++ R+ + KGL NTIT NT++ C KL+ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L RG V+YG L+ G + + N+AL+++++M++ ++ YN +I G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ K + A + L G+ PD T+N +I G C +G + +A KM E PD
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
T NIL+ L +++ + G + DS T +I L +RRL+ +F
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSF 614
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 173/314 (55%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G +PD VT++ ++D K+GKL E ++L ++M +G+ P+ TYN L+ G+CK
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA ++ DLM PD+ TY++LIN +C A +++ RL +E+ S L+P+ +TYNT
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+ F +SG+ A +L E+ G+ P+ VT+ I++ C G+++KA +I M+++
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ YN +I C A +++A+ + + KG+K + +T N ++ LC + L EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
ML + G D+ +Y LI + +++L +EMK + T +I L
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Query: 301 SQSGKTEQAIDMLN 314
S + +DML+
Sbjct: 606 SDRRLDKSFLDMLS 619
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 17/273 (6%)
Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
++SY + D K N A+ L++ M + + +P+ +N + ++++ + + +
Sbjct: 35 KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
+ +G+ D T +I+ +C + ++ A + + ++PD +T + L++G C EG
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
+ +A+ + + D VT +TLI+ LC + R+ +A L+ M E PD TY
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
+ L +SG A M E I S + YS I+ C
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEE-----------------RNIKASVVQYSIVIDSLCK 257
Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
G + DAL +F E KGI + TY +L+ GL
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 239/461 (51%), Gaps = 1/461 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ F P + N +L K GK ++V+ DM G P TYNI++ CK G
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
++ A + + M +PD TYN +I+G+ G L++ +EM+ + PDV+TYN
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + G+ + E+ +G+KPN V+++ ++ +CKEG + +A K +M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ TY +LIDANCK GN+ +AFR+ + M + G++ N +T ++ LC +++ EA
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L G + SY LI G+ + + +RAL+L +E+K R I P Y IWGL
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
K E A ++NE+ + G+ + + T++ + G + L ++M E + +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
VT +L+ GLC+ ++ KA+ +F R G ++ + +I LCK+ ++E A L
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
+M +K L PDR Y ++ + G + EA M E G
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 236/467 (50%), Gaps = 6/467 (1%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +PD VTYN+++D K G+L++ +MK P+ TYN L++ +CK G L
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ M N P+V +Y+ L++ +C GM+++A + +M + L+P+ TY +LI+
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ G +AF+L +E+ + G++ N VT+ +I C ++ +A ++ M+ G P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+YN LI KA NM+ A +++ + +G+K + + T + LC +K++ A +++N
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+ G + + Y TL+ YF+ L L DEMKE I + T+ +I GL ++
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 305 KTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
+A+D N + G+ + F +I G C + QVE A +MV+K PD
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
L+ G ++G + +AL G +D + Y +L+ L +L+ A L EM
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
+ + PD ++ E G ++EA + S +++ HQ++ +
Sbjct: 712 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK-----HQLLTSD 753
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 227/480 (47%), Gaps = 23/480 (4%)
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
T+N +P ++ L + + GMLEEA + +M+ ++ P + N L++RF + G++
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
+ + ++ G +P T+NIMI CKEG ++ A + M+ G PD VTYN++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
ID K G +++ + M + + IT N +++ C KL G
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
+ VSY TL+ + ++ +A+K + +M+ ++P+ +TY ++I + G A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+ NE+LQ G+ + T+ +I G C ++++A + KM P++ + N L+ G
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 372 REGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
+ +++AL+ LKG+ + D + Y T I LC ++E A +++EM+E + +
Sbjct: 484 KAKNMDRALELLNE--LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSK---TPEEID--- 479
Y + A +SG E M +E + V+ K + +D
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 480 ---------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
++ ++ I+ C + + A +FE+ QKG+ +++ Y +LM+G K+
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 36/389 (9%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+G G P+ V+Y+T++DA K+G + + DM++ GLVPN TY L+ CK+G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A R+ + M Q +V TY LI+G C+A ++EA L +M++ ++P++ +YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F ++ A +L++EL GIKP+ + + I C KI+ A ++ M+E G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK-------------------------- 214
+ + Y TL+DA K+GN E ++D M
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 215 ----------GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
GL+ N ++ LC + +++ A L ++G D +Y +L+ G
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
F+ AL L D+M E + Y +++WGLS + ++A L E++ G+ PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
E +++ G +++A++ + +++
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMK 746
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 165/359 (45%), Gaps = 21/359 (5%)
Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
RN+ GF ++ LID G +EEA + M R + T + N +LH
Sbjct: 185 RNVCVPGFGVFDALFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240
Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
K D+ G +Y +I ++ A L++EMK R ++P T TY
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
N+MI G + G+ + + E+ PD T+N +I+ FC G++ L+F+ +M
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
KP++V+ + L+ C+EG++++A+KF+ G + TY +LI + CK L D
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
AF L +EM + + + TY A+ L ++ R++EA++ GK++ V PN +
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF------GKMDTAGVIPNLA- 473
Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
SY+ I+ AL++ E + +GI + Y + GL K
Sbjct: 474 ----------SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 150/304 (49%), Gaps = 18/304 (5%)
Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
L+EA + + + S L+ + + K + + + +M P+ FTYN
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
MI + + G E A + E+ G++PD T+N++I GF G+++ + F +M +
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
+PD++T N L++ C+ G L L+F+R G + V+Y+TL+ + CKE ++ A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
+M L P+ YTY ++ A + G L +A + + M++ G
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG--------------- 432
Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
++ + ++Y+ I+ C R K+A ++F + G+ N ++Y L++G +K K++
Sbjct: 433 --VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK-AKNMD 489
Query: 536 KAVD 539
+A++
Sbjct: 490 RALE 493
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 258/517 (49%), Gaps = 69/517 (13%)
Query: 13 YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
YNT+L++L + G ++E++ + +M + + PN TYN +V+GYCKLG ++EA + V +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-------------------------- 106
+ PD +TY LI G+C L+ AF++ EM
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 107 ESLKL---------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
E++ L P V TY LI S R EA L+ E++E GIKPN T+ ++I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
C + K +KA +++ M E G P+ +TYN LI+ CK G +E+A ++++M + L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 218 MNT----------------------------------ITLNTILHTLCCEKKLDEAYMLL 243
NT +T N+++ C D AY LL
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
+ + RG D+ +Y ++I + ++ A L+D ++++ + P+ Y A+I G ++
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
GK ++A ML ++L +P+ TFN +IHG C++G++++A KMV+ +P + T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
IL+ L ++G + A F+ + G D+ TY T I + C+E RL DA ++++M E
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
+ PD +TY+++ + G+ A M +TG
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 269/540 (49%), Gaps = 7/540 (1%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC + V Y ++ L +++E DL MK P TY +L+ C EA
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ +V M + P++ TY +LI+ C+ E+A L +M L+P+V+TYN LIN
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ + G +A +++ ++ + PN T+N +IK YCK + KA ++ M E PD
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPD 461
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYN+LID C++GN + A+R++ +M +GL + T +++ +LC K+++EA L +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S ++G + V Y LI GY + K + A + ++M + +P++ T+NA+I GL G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K ++A + ++++ G+ P +T +IH +G + A +M+ KPD T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
+ CREG L A G + D TY++LI + AF +L M +
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 425 KLGPDRYTYAAIHTALVE--SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
P ++T+ ++ L+E G+ + ++ M + + VV+ + P++
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD-TVVELLEKMVEHSVTPNA 760
Query: 483 ISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGL--IKRRKSISKAVD 539
SY + I C G + A ++F+ R +GI+ ++ + L++ +K+ +K VD
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 239/475 (50%), Gaps = 55/475 (11%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G P+ TY ++D+L + K + R+LL M ++GL+PN TYN L++GYCK G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+++A+ VV+LM K P+ TYN LI G+C + + + L K +E K+LPDVVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER-KVLPDVVTYNS 467
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ SG A++L+ +++ G+ P+ T+ MI CK ++++AC + ++E+ G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ V Y LID CKAG ++EA M++ M K N++T N ++H LC + KL EA
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 241 ML----------------------------LNSASKR-------GYYLDEVSYGTLITGY 265
+L + A R G D +Y T I Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
R+ + A + +M+E + P FTY+++I G G+T A D+L + +G P +
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 326 TTFNTIIHG---------------FCSEG---QVEKALQFHNKMVEKSFKPDIVTCNILL 367
TF ++I C+ + + ++ KMVE S P+ + L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 368 SGLCREGILEKALKFFRSWIL-KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
G+C G L A K F +G + + +N L+S CK ++ +A ++ +M
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 227/473 (47%), Gaps = 31/473 (6%)
Query: 62 KEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
K A+ ++QN V++Y L+ N G + F++R M +S + D +
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVL 163
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
L + + R +KLI +N ++ + G +D+ ++ M E+
Sbjct: 164 DLCRKMNKDERFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEMLED 212
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
P+ TYN +++ CK GN+EEA + + + GL + T +++ C K LD A
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
+ + N +G +EV+Y LI G + + A+ L+ +MK+ + P+ TY +I
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
L S + +A++++ E+ ++G+ P+ T+ +I CS+ + EKA + +M+EK P+
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
++T N L++G C+ G++E A+ + + ++ TYN LI CK + A G+L+
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLN 451
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
+M E+K+ PD TY ++ SG + A + S+M + G +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV----------------- 494
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
P +Y+ I+ C R ++A +F+ QKG+ N Y L++G K K
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 214/437 (48%), Gaps = 18/437 (4%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G +PD TY +++D+L K ++ E DL ++++G+ PN Y L+ GYCK G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ EA +++ M LP+ T+N LI+G C G L+EA L ++M + L P V T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+R + G A+ ++ G KP+A T+ I+ YC+EG++ A ++ M ENG
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
SPD TY++LI G AF ++ M G + + T +++ L L+ Y
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL-----LEMKY 722
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
++G + + ++ + + ++L ++M E + P+ +Y +I G+
Sbjct: 723 -----GKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
+ G A + + + ++ G+ P E FN ++ C + +A + + M+ P
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
+ +C +L+ GL ++G E+ F++ + G D + + +I + K+ +E + L +
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Query: 420 EMEEKKLGPDRYTYAAI 436
ME+ TY+ +
Sbjct: 891 VMEKNGCKFSSQTYSLL 907
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 235/442 (53%), Gaps = 2/442 (0%)
Query: 3 GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
G+G P VT N++L+ +++E L+ M + G P+ T+ LV G +
Sbjct: 130 GYG--PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 63 EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
EA+ +V+ M PD+ TY +ING C G + A L +ME K+ DVV Y+T+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
+ + +A L E+D GI+P+ T++ +I C G+ A +++ +M E +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
P+ VT+N+LIDA K G + EA ++ D M ++ + N +T N++++ C +LDEA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
+ D V+Y TLI G+ + +K ++L+ +M R ++ +T TY +I G Q
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
+ + A + +++ G+ P+ T+NT++ G C G++EKA+ + + +PDI T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
NI+ G+C+ G +E F S LKG D + YNT+IS CK+ E+A+ L +M+
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 423 EKKLGPDRYTYAAIHTALVESG 444
E PD TY + A + G
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDG 569
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 238/445 (53%), Gaps = 1/445 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD VT+ T++ LF+ K +E L+ M +G P+ TY +++G CK G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ +++ M + K DV Y+ +I+ C +++A L EM++ + PDV TY++LI+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
GR +A +L+ ++ E I PN VT N +I + KEGK+ +A K+ M + P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYN+LI+ C ++EA ++ +M K + +T NT+++ C KK+ + L
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S+RG + V+Y TLI G+F+ + A ++ +M + P+ TYN ++ GL ++G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K E+A+ + L +S M PD T+N + G C G+VE + K KPD++ N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
++SG C++G+ E+A F G DS TYNTLI + ++ + L+ EM
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
+ D TY + T ++ GRL++
Sbjct: 585 RFAGDASTYGLV-TDMLHDGRLDKG 608
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 264/524 (50%), Gaps = 19/524 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V ++ +L A+ K K + V M+ G+ N TYNI+++ C+ L A+
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T N L+NG+C+ + EA L +M + PD VT+ TL++ F
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ ++ EA L++ + G +P+ VT+ +I CK G+ D A ++ ME+ D V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
Y+T+ID+ CK ++++A + M KG++ + T ++++ LC + +A LL+
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R + V++ +LI + ++ K A KL+DEM +R I P+ TYN++I G +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A + ++ +PD T+NT+I+GFC +V ++ M + + VT L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G + + A F+ + G + +TYNTL+ LCK +LE A + +++ K+
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
PD YTY + + ++G++E+ F S+ ++ + P I+Y
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG------------------VKPDVIAY 523
Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ I+ C +G ++A +F + ++ G + TY L+ ++
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 230/472 (48%), Gaps = 17/472 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA+ + M +++ P + ++ L++ + ++ME L + ++ TYN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+IN + A ++ ++ + G P+ VT N ++ +C +I +A +V M E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD VT+ TL+ + EA +++ M KG + + +T +++ LC + D A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LLN K D V Y T+I + + AL L+ EM + I P FTY+++I L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G+ A +L+++L+ + P+ TFN++I F EG++ +A + ++M+++S P+I
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N L++G C L++A + F + K D VTYNTLI+ CK +++ D L +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M + L + TY + ++ + AQ MV G + P
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-----------------VHP 448
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+ ++Y+ ++ C G+ + A+ +FE ++ + + TY + G+ K K
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 176/370 (47%), Gaps = 17/370 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D+A + M ++ P V ++ L+ A K + + M G+ N T N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
+++ LC +L A +L K GY V+ +L+ G+ + + A+ L D+M E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
P T T+ ++ GL Q K +A+ ++ ++ G PD T+ +I+G C G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L NKM + + D+V + ++ LC+ ++ AL F KG D TY++LIS
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M E+K+ P+ T+ ++ A + G+L EA+K M++
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ------ 338
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
IDP+ ++Y+ IN C R +A QIF K + TY L+
Sbjct: 339 -----------RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 525 NGLIKRRKSI 534
NG K +K +
Sbjct: 388 NGFCKAKKVV 397
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 240/442 (54%), Gaps = 1/442 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD T+NT++ LF +GK++E L+ M + G P+ TYN +V+G C+ G A+ +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + DV+TY+ +I+ C G ++ A L KEME+ + VVTYN+L+ +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
+G+ + L+ ++ I PN +T N+++ + KEGK+ +A ++ + M G SP+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
YNTL+D C + EA M+D+M R + +T +++ C K++D+ + + S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
KRG + V+Y L+ G+ + K A +L+ EM ++P TY ++ GL +GK E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+A+++ +L +S M + TII G C G+VE A + K KP+++T +++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
SGLC++G L +A R G A + TYNTLI + ++ L + L+ EM+
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 428 PDRYTYAAIHTALVESGRLEEA 449
D + + L+ SG L+++
Sbjct: 576 ADASSIKMVIDMLL-SGELDKS 596
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 234/449 (52%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
T N +++ + K +L + K G P+ TT+N L+ G G + EA+ +VD M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+N PDV TYN ++NG C +G A L ++ME + DV TY+T+I+ G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
A L E++ GIK + VT+N +++ CK GK + ++++M P+ +T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
+D K G ++EA + M +G+ N IT NT++ C + +L EA +L+ +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
D V++ +LI GY ++ + +K++ + +R ++ + TY+ ++ G QSGK + A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+ E++ G++PD T+ ++ G C G++EKAL+ + + IV ++ G+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
+ G +E A F S KG + +TY +IS LCK+ L +A LL +MEE P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
TY + A + G L + K M G
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 240/532 (45%), Gaps = 52/532 (9%)
Query: 32 LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
L +M + +P+ ++ S + + + N +++T N++IN +C
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 92 NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
A+ + ++ L PD T+NTLI F G+ EA L+D + E+G +P+ V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
T+N ++ C+ G A ++R MEE D TY+T+ID+ C+ G ++ A + M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
KG+K + +T N+++ LC K ++ +LL R + +++ L+ + ++ K
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
A +L+ EM R I P+ TYN ++ G + +A +ML+ ++++ PD TF ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 332 I-----------------------------------HGFCSEGQVEKALQFHNKMVEKSF 356
I GFC G+++ A + +MV
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
PD++T ILL GLC G LEKAL+ F + V Y T+I +CK ++EDA+
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
L + K + P+ TY + + L + G L EA M E G
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-------------- 540
Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
P+ +Y+ I H G + ++ EE + G + + S+ +++ L+
Sbjct: 541 ---PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 238/475 (50%), Gaps = 18/475 (3%)
Query: 63 EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
+A+ + M +++ LP + ++ + K++E + ++ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
N F ++ A+ ++ ++ + G +P+ T N +IK EGK+ +A +V M ENG
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
PD VTYN++++ C++G+ A ++ M + +K + T +TI+ +LC + +D A L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
+G V+Y +L+ G + K N L +M R+I+P+ T+N ++ +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
GK ++A ++ E++ G+ P+ T+NT++ G+C + ++ +A + MV PDIVT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
L+ G C ++ +K FR+ +G ++VTY+ L+ C+ +++ A L EM
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
+ PD TY + L ++G+LE+A + + ++ ++D
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-----------------KMDLGI 473
Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
+ Y+ I C G+ +DA +F KG+ N TY +++GL K + S+S+A
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEA 527
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
D K + A+ L+ EM + +PS ++ ++++ + +D +L +G+ + T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
N +I+ FC + A K+++ ++PD T N L+ GL EG + +A+ +
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
G D VTYN++++ +C+ A LL +MEE+ + D +TY+ I +L G ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 448 EAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEK 488
A M ET I VV N+ EI P+ I+++
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
++ +G+ ++A ++++E +GI+ N TY LM+G
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 31/235 (13%)
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K + AI + E+++S +P F+ Q L F ++ +I T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 365 ILLSGLCR-------EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
I+++ CR +L K +K G D+ T+NTLI L E ++ +A L
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKL-------GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
+ M E PD TY +I + SG A M E
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-----------------RN 223
Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+ +YS I+ C G A+ +F+E KGI + TY +L+ GL K K
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 237/444 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P VT +++L+ ++++ L+ M + G P+ T+ L+ G
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ +VD M Q P++ TY +++NG C G ++ AF L +ME+ K+ DVV +NT
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ + +A L E++ GI+PN VT++ +I C G+ A +++ +M E
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT+N LIDA K G EA ++ D M ++ + + T N++++ C +LD+A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + D +Y TLI G+ + ++ +L+ EM R ++ T TY +I GL
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G + A + +++ G+ PD T++ ++ G C+ G++EKAL+ + M + K DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
++ G+C+ G ++ F S LKG + VTYNT+IS LC +R L++A+ LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
M+E PD TY + A + G
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 263/523 (50%), Gaps = 17/523 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP +N +L A+ K K + V L M++ G+ N TYNIL++ +C+ + A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T + L+NG+C+ + +A L +M + PD +T+ TLI+ F
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA L+D + + G +PN VT+ +++ CK G ID A ++ ME D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
+NT+ID+ CK ++++A + M KG++ N +T ++++ LC + +A LL+
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
++ + V++ LI + ++ K A KL D+M +R I P FTYN++I G +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ PD T+NT+I GFC +VE + +M + D VT L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ GL +G + A K F+ + G D +TY+ L+ LC +LE A + M++ ++
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
D Y Y + + ++G++++ + G V+PN ++Y+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG------VKPNV-----------VTYN 469
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
I+ CS+ ++A + ++ ++ G + TY L+ ++
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 236/449 (52%), Gaps = 1/449 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD +T+ T++ LF K +E L+ M ++G PN TY ++V+G CK G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ A +++ M K DV +N +I+ C +++A L KEME+ + P+VVTY++
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ GR +A +L+ ++ E I PN VT N +I + KEGK +A K+ +M +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TYN+LI+ C +++A +M + M K + T NT++ C K++++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S RG D V+Y TLI G F D + A K++ +M + P TY+ ++ GL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+GK E+A+++ + + +S + D + T+I G C G+V+ + K KP++
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N ++SGLC + +L++A + G DS TYNTLI + ++ + L+ E
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
M + D T + L GRL+++
Sbjct: 526 MRSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 229/462 (49%), Gaps = 17/462 (3%)
Query: 71 MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
M +++ LP ++ +N L++ + L ++M+ L + ++ TYN LIN F +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
A L+ ++ + G +P+ VT + ++ YC +I A +V M E G+ PD +T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
LI EA ++D M ++G + N +T +++ LC +D A+ LLN
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
D V + T+I + + AL L+ EM+ + I P+ TY+++I L G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
+L+++++ + P+ TFN +I F EG+ +A + H+ M+++S PDI T N L++G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
C L+KA + F + K D TYNTLI CK +R+ED L EM + L D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
TY + L G + AQK MV G + P ++YS ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-----------------VPPDIMTYSILLD 403
Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
C+ G+ + AL++F+ ++ I ++ Y ++ G+ K K
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 168/308 (54%), Gaps = 2/308 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ VT+N ++DA K+GK E L DM K+ + P+ TYN L++G+C L +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M PD+ TYN LI G+C + +E+ L +EM L+ D VTY TLI F
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G A K+ ++ G+ P+ +T++I++ C GK++KA ++ M+++ D
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y T+I+ CKAG +++ + + + KG+K N +T NT++ LC ++ L EAY LL
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+ G D +Y TLI + RD + +L EM+ + + T ++ + G+ +
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 551
Query: 308 QA-IDMLN 314
++ +DML+
Sbjct: 552 KSFLDMLS 559
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 134/277 (48%), Gaps = 17/277 (6%)
Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
+ L++ + +K + + L ++M+ I + +TYN +I + + A+ +L +++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
+ G P T +++++G+C ++ A+ ++MVE ++PD +T L+ GL
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
+A+ + +G + VTY +++ LCK ++ AF LL++ME K+ D + I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
+L + +++A M G I P+ ++YS I+ CS GR
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKG-----------------IRPNVVTYSSLISCLCSYGR 235
Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
+ DA Q+ + +K I N T+ L++ +K K +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
>sp|Q9FRS4|PPR22_ARATH Pentatricopeptide repeat-containing protein At1g08610
OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1
Length = 559
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 236/441 (53%)
Query: 9 DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
D T N IL L GKL + L+ M + VP+ + + LV G ++ L +AM ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 69 DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
+M + +PD TYNM+I C G + A L ++M PDV+TYNT+I F+
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
G + +A + + ++G P +T+ ++++ C+ +A +++ +M G PD VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
N+L++ NC+ GN+EE ++ + GL++NT+T NT+LH+LC + DE +LN +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
Y ++Y LI G + +RA+ + +M E++ +P TYN ++ +S+ G +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
AI++L L + P T+N++I G +G ++KAL+ +++M++ PD +T L+
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
G CR ++E+A + + +G + TY +I LCK++ +E A ++ M P
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 429 DRYTYAAIHTALVESGRLEEA 449
D Y AI + E G EA
Sbjct: 523 DETIYTAIVKGVEEMGMGSEA 543
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 207/423 (48%), Gaps = 18/423 (4%)
Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
T N +++ +G+ +A KL++ + H P+ + + +++ + ++DKA I+R M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
+G PD +TYN +I CK G++ A +++ M G + IT NT++ +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
++A + G ++Y L+ R + RA+++ ++M P TYN++
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
+ + G E+ ++ +L G+ + T+NT++H CS ++ + N M + S+
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
P ++T NIL++GLC+ +L +A+ FF + + D VTYNT++ ++ KE ++DA
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
LL ++ P TY ++ L + G +++A + M++ G
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG---------------- 449
Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
I P I+ I C ++A Q+ +ET +G I STY ++ GL K +K I
Sbjct: 450 -IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK-KKEIEM 507
Query: 537 AVD 539
A++
Sbjct: 508 AIE 510
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 167/355 (47%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +PD +TYN I+ L KKG + LL DM G P+ TYN ++ G ++A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+R QN P + TY +L+ C A + ++M PD+VTYN+L+N
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
G E +I + HG++ N VT+N ++ C D+ +I+ M + + P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+TYN LI+ CKA + A M + + +T NT+L + E +D+A LL
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
++Y ++I G + +AL+L+ +M + I P T ++I+G ++
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
E+A +L E G +T+ +I G C + ++E A++ M+ KPD
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 156/330 (47%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD +TYNT++ +F G + D + G P TY +LV C+ A
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 263
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ V++ M PD+ TYN L+N C G LEE + + + S L + VTYNTL++
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
E ++++ + + P +T+NI+I CK + +A M E PD
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYNT++ A K G +++A ++ ++ IT N+++ L + + +A L +
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 443
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
G + D+++ +LI G+ R A ++ E R TY +I GL +
Sbjct: 444 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 503
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
+ E AI+++ +L G PDET + I+ G
Sbjct: 504 EIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC P +TY +++ + + ++L DM +G P+ TYN LV+ C+ G L+E
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
V+ + + + TYN L++ C+ +E + M P V+TYN LIN
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
++ A ++ E P+ VT+N ++ KEG +D A +++ ++ P
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+TYN++ID K G M++A + M G+ + IT ++++ C ++EA +L
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLK 478
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S RG + +Y +I G + ++ A+++ + M P Y A++ G+ + G
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Query: 305 KTEQAI 310
+A+
Sbjct: 539 MGSEAV 544
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 266/524 (50%), Gaps = 19/524 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP V +N +L A+ K K + V L M++ +V TYNIL++ +C+ + A+
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T + L+NG+C+ + +A L +M + PD +T+ TLI+ F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA L+D + + G +PN VT+ +++ CK G D A ++ ME D V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
+NT+ID+ CK ++++A + M KG++ N +T ++++ LC + +A LL+
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
++ + V++ LI + ++ K A KL+D+M +R I P FTYN+++ G +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ PD T+NT+I GFC +VE + +M + D VT L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ GL +G + A K F+ + G D +TY+ L+ LC +LE A + M++ ++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
D Y Y + + ++G++++ F S+ ++ V+PN ++Y
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-------VKPNV-----------VTY 543
Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ I+ CS+ ++A + ++ ++ G N TY L+ ++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 236/444 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P VT +++L+ ++++ L+ M + G P+ T+ L+ G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ +VD M Q P++ TY +++NG C G + A L +ME+ K+ DVV +NT
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ + +A L E++ GI+PN VT++ +I C G+ A +++ +M E
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT+N LIDA K G EA ++ D M ++ + + T N++++ C +LD+A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + D V+Y TLI G+ + ++ +L+ EM R ++ T TY +I GL
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G + A + +++ G+ PD T++ ++ G C+ G++EKAL+ + M + K DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
++ G+C+ G ++ F S LKG + VTYNT+IS LC +R L++A+ LL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
M+E P+ TY + A + G
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 237/449 (52%), Gaps = 1/449 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD +T+ T++ LF K +E L+ M ++G PN TY ++V+G CK G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
A+ +++ M K DV +N +I+ C +++A L KEME+ + P+VVTY++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ GR +A +L+ ++ E I PN VT N +I + KEGK +A K+ +M +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TYN+L++ C +++A +M + M K + +T NT++ C K++++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S RG D V+Y TLI G F D + A K++ +M + P TY+ ++ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+GK E+A+++ + + +S + D + T+I G C G+V+ + K KP++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N ++SGLC + +L++A + G +S TYNTLI + ++ + L+ E
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
M + D T + L GRL+++
Sbjct: 601 MRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 253/519 (48%), Gaps = 17/519 (3%)
Query: 13 YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
Y IL KL++ L M K +P+ +N L+S K+ + + + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 73 QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
+ + + ++TYN+LIN +C + A L +M L P +VT ++L+N + R
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
+A L+D++ E G +P+ +T +I K +A +V M + G P+ VTY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
+ CK G+ + A +++ M ++ + + NTI+ +LC + +D+A L +G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
+ V+Y +LI+ + + A +L +M E++I P+ T+NA+I + GK +A +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
+++++ + PD T+N++++GFC +++KA Q MV K PD+VT N L+ G C+
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
+E + FR +G D+VTY TLI L + ++A + +M + PD T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
Y+ + L +G+LE+A + M ++ EI Y+ I
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKS-----------------EIKLDIYIYTTMIEGM 515
Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
C G+ D +F KG+ N TY +++GL +R
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 233/472 (49%), Gaps = 17/472 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ LP + +N L++ + L ++M+ L+++ + TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + A L+ ++ + G +P+ VT + ++ YC +I A +V M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD +T+ TLI EA ++D M ++G + N +T +++ LC D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LLN D V + T+I + + AL L+ EM+ + I P+ TY+++I L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G+ A +L+++++ + P+ TFN +I F EG+ +A + ++ M+++S PDI
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T N L++G C L+KA + F + K D VTYNTLI CK +R+ED L E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M + L D TY + L G + AQK MV G + P
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-----------------VPP 468
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
++YS ++ C+ G+ + AL++F+ ++ I ++ Y ++ G+ K K
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 2/308 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ VT+N ++DA K+GK E L DM K+ + P+ TYN LV+G+C L +A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M PDV TYN LI G+C + +E+ L +EM L+ D VTY TLI F
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G A K+ ++ G+ P+ +T++I++ C GK++KA ++ M+++ D
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y T+I+ CKAG +++ + + + KG+K N +T NT++ LC ++ L EAY LL
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+ G + +Y TLI + RD + +L EM+ + + T ++ + G+ +
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 626
Query: 308 QA-IDMLN 314
++ +DML+
Sbjct: 627 KSFLDMLS 634
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 172/368 (46%), Gaps = 17/368 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D A + M ++ P V +N L+ A K + + + M R + T N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
+++ C ++ A LL K GY V+ +L+ GY ++ + A+ L D+M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
P T T+ +I GL K +A+ +++ ++Q G P+ T+ +++G C G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L NKM + D+V N ++ LC+ ++ AL F+ KG + VTY++LIS
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M EKK+ P+ T+ A+ A V+ G+ EA+K M++
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK------ 358
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
IDP +Y+ +N C R A Q+FE K + TY L+
Sbjct: 359 -----------RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 525 NGLIKRRK 532
G K ++
Sbjct: 408 KGFCKSKR 415
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 17/302 (5%)
Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
+ KLD+A L K V + L++ + +K + + L ++M+ +I+ +T
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
YN +I + + A+ +L ++++ G P T +++++G+C ++ A+ ++MV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
E ++PD +T L+ GL +A+ + +G + VTY +++ LCK +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
A LL++ME K+ D + I +L + +++A M G
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG------------ 290
Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
I P+ ++YS I+ CS GR+ DA Q+ + +K I N T+ L++ +K K
Sbjct: 291 -----IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 533 SI 534
+
Sbjct: 346 FV 347
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 273/583 (46%), Gaps = 64/583 (10%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD T+N +++ L +G + L+ M+K G P TYN ++ YCK G K A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M DV TYNMLI+ C + + + + L ++M + P+ VTYNTLIN F
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G+ + A +L++E+ G+ PN VT N +I + EG +A K+ ME G +P V+
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y L+D CK + A M R G+ + IT ++ LC LDEA +LLN S
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 248 KRGYYLDEVSYGTLITGY-----FRDEK------------------------------AN 272
K G D V+Y LI G+ F+ K
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
A+++++ M FT+N ++ L ++GK +A + + + G++P+ +F+ +I
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
+G+ + G+ KA ++M + P T LL GLC+ G L +A KF +S A
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------- 445
VD+V YNTL++++CK L A L EM ++ + PD YTY ++ + L G+
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Query: 446 LEEAQK-------------FTSIMVETGK----INHQVVQPNTSKTPEEIDPSSISYSEK 488
+EA+ F M + G+ I + N TP+ + +++
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----- 725
Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
I+ + G+ + + E + N +TY L++G KR+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 249/501 (49%), Gaps = 18/501 (3%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD VTY+ +++ K G+ ++++ + + GL PN Y+ L+ C++G LKEA+R+
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M D +T+N+L+ C AG + EA + M S +LP+ V+++ LIN +
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
SG ++AF + DE+ + G P T+ ++K CK G + +A K ++++ + D V
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
YNTL+ A CK+GN+ +A + M ++ + ++ T +++ LC + K A + A
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 248 KRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
RG L ++V Y + G F+ + + ++M P T NAMI G S+ GK
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
E+ D+L E+ P+ TT+N ++HG+ V + + ++ PD +TC+ L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G+C +LE LK +++I +G VD T+N LIS C + AF L+ M +
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
D+ T A+ + L + R +E++ M + G I P S Y
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-----------------ISPESRKYI 898
Query: 487 EKINEHCSQGRYKDALQIFEE 507
IN C G K A + EE
Sbjct: 899 GLINGLCRVGDIKTAFVVKEE 919
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 269/531 (50%), Gaps = 17/531 (3%)
Query: 4 FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
+G P T N IL ++ K G+ V L +M K+ + P+ T+NIL++ C G ++
Sbjct: 152 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 211
Query: 64 AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
+ ++ M ++ P + TYN +++ +C G + A L M+S + DV TYN LI+
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
S R + + L+ ++ + I PN VT+N +I + EGK+ A +++ M G SP
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 331
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
+ VT+N LID + GN +EA +M +M KGL + ++ +L LC + D A
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
+ G + ++Y +I G ++ + A+ L +EM + I P TY+A+I G +
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
G+ + A +++ + + G+ P+ ++T+I+ C G +++A++ + M+ + D T
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
N+L++ LC+ G + +A +F R G ++V+++ LI+ AF + EM +
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
P +TY ++ L + G L EA+KF + H V P +D ++
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL-------HAV--------PAAVD--TV 614
Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
Y+ + C G A+ +F E Q+ I + TY +L++GL ++ K++
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/584 (23%), Positives = 242/584 (41%), Gaps = 91/584 (15%)
Query: 9 DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
D+ T+N ++ +L K GK+ E + + M G++PN +++ L++GY G +A V
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 69 DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
D MT+ P +TY L+ G C G L EA + K + ++ D V YNTL+ +S
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-------------- 174
G +A L E+ + I P++ T+ +I C++GK A +
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 175 ----------------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
M+ G +PD VT N +ID + G +E+ ++ MG
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
+ N T N +LH GY + + +
Sbjct: 747 NQNGGPNLTTYNILLH-----------------------------------GYSKRKDVS 771
Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
+ L+ + I+P T ++++ G+ +S E + +L + G+ D TFN +I
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
C+ G++ A M D TC+ ++S L R +++ +G +
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA--- 449
+S Y LI+ LC+ ++ AF + EM K+ P +A+ AL + G+ +EA
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 450 -------------QKFTSIMVETGKINHQVVQPNTSKTPEE---IDPSSISYSEKINEHC 493
FT++M K N V++ + + +SY+ I C
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCK-NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010
Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
++G A +++EE + G N +TY L+ GL+ R + S A
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 36/358 (10%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ G PD VT N ++D + GK+ + DLL +M Q PN TTYNIL+ GY K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ + + + N LPD T + L+ G C + MLE ++ K + D T+N
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI++ +G AF L+ + GI + T + M+ + + ++ ++ M + G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAF-------------------RMMDVMGRKG------ 215
SP+ Y LI+ C+ G+++ AF M+ + + G
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 216 ------LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
LKM + + T++H C + EA L S G LD VSY LITG
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID-MLNELLQSGMI 322
A +L++EMK + + TY A+I GL D +L +LL G I
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 238/442 (53%), Gaps = 1/442 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD +T NT+++ L GK E L+ M + G PN TY +++ CK G AM +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + D Y+++I+G C G L+ AF L EME + +++TYN LI F
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
+GR + KL+ ++ + I PN VT +++I + KEGK+ +A ++ + M G +PD +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y +LID CK ++++A +M+D+M KG N T N +++ C ++D+ L S
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
RG D V+Y TLI G+ K N A +L+ EM R++ P+ TY ++ GL +G++E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+A+++ ++ +S M D +N IIHG C+ +V+ A + K KP + T NI++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
GLC++G L +A FR G A D TYN LI + + + L+ E++
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 428 PDRYTYAAIHTALVESGRLEEA 449
D T + ++ GRL+++
Sbjct: 611 VDASTIKMV-IDMLSDGRLKKS 631
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 244/482 (50%), Gaps = 17/482 (3%)
Query: 38 KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
K G PN T++ L++G C G + EA+ +VD M + PD+ T N L+NG C +G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 98 EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
EA L +M P+ VTY ++N +SG++ A +L+ +++E IK +AV ++I+I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
CK G +D A + ME G + + +TYN LI C AG ++ +++ M ++ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
N +T + ++ + E KL EA L RG D ++Y +LI G+ ++ ++A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
D M + P+ T+N +I G ++ + + +++ ++ G++ D T+NT+I GFC
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
G++ A + +MV + P+IVT ILL GLC G EKAL+ F +D
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
YN +I +C +++DA+ L + K + P TY + L + G L EA+ M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
E G P +Y+ I H G ++++ EE ++ G +++
Sbjct: 571 EDGHA-----------------PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Query: 518 ST 519
ST
Sbjct: 614 ST 615
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 236/445 (53%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ +T++T+++ L +G+++E +L+ M + G P+ T N LV+G C G EAM +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M + P+ TY ++N C +G A L ++ME + D V Y+ +I+ +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G AF L +E++ GI N +T+NI+I +C G+ D K++R+M + +P+ VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
++ LID+ K G + EA + M +G+ +TIT +++ C E LD+A +++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+G + ++ LI GY + + + L+L+ +M R ++ T TYN +I G + GK
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
A ++ E++ + P+ T+ ++ G C G+ EKAL+ K+ + + DI NI++
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
G+C ++ A F S LKG TYN +I LCK+ L +A L +MEE
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
PD +TY + A + G ++ K
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKL 600
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 256/529 (48%), Gaps = 18/529 (3%)
Query: 3 GFGCLPD-NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
GF D N++Y L + K ++ DL DM +P ++ L S K
Sbjct: 45 GFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 62 KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
+ + M +++T +++IN +C L AF ++ L P+ +T++TL
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
IN GR EA +L+D + E G KP+ +T N ++ C GK +A ++ M E G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
P+ VTY +++ CK+G A ++ M + +K++ + + I+ LC LD A+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
L N +G + ++Y LI G+ + + KL +M +R+I P+ T++ +I
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
+ GK +A ++ E++ G+ PD T+ ++I GFC E ++KA Q + MV K P+I
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
T NIL++G C+ ++ L+ FR L+G D+VTYNTLI C+ +L A L EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
+K+ P+ TY + L ++G E+A + + K+ E+D
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALE---------------IFEKIEKSKMELDIG 509
Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
Y+ I+ C+ + DA +F KG+ TY ++ GL K+
Sbjct: 510 I--YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 224/462 (48%), Gaps = 17/462 (3%)
Query: 71 MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
M ++ LP V ++ L + + L K+ME + ++ T + +IN F +
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
AF + ++ + G +PN +T + +I C EG++ +A ++V M E G PD +T NT
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
L++ C +G EA ++D M G + N +T +L+ +C + A LL +R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
LD V Y +I G + + A L++EM+ + I + TYN +I G +G+ +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
+L ++++ + P+ TF+ +I F EG++ +A + H +M+ + PD +T L+ G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
C+E L+KA + + KG + T+N LI+ CK R++D L +M + + D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
TY + E G+L A++ MV + K P P+ ++Y ++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMV-------------SRKVP----PNIVTYKILLD 481
Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
C G + AL+IFE+ + + ++ Y +++G+ K
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 256/538 (47%), Gaps = 18/538 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G + + Y TI++AL K G +S + K G V + L+ G+C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 61 LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
L++A++V D+M++ + P+ +Y++LI+G C G LEEAF L+ +M P TY
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
LI + G +AF L DE+ G KPN T+ ++I C++GKI++A + R M ++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
P +TYN LI+ CK G + AF ++ VM ++ K N T N ++ LC K +A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
LL G D VSY LI G R+ N A KL M I P T+ A+I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
+ GK + A L +L+ G+ DE T T+I G C G+ AL +V+
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
+ N++L L + +++ L G VTY TL+ L + + +F +L
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
M+ P+ Y Y I L + GR+EEA+K S M ++G +
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG-----------------VS 648
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
P+ ++Y+ + + + G+ AL+ ++G +N Y +L+ G + +K I +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 223/456 (48%), Gaps = 17/456 (3%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC P+ TY ++D L + GK+ E + M K + P+ TYN L++GYCK G + A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
++ +M + P+V T+N L+ G C G +A L K M L PD+V+YN LI+
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
G A+KL+ ++ I+P+ +T +I +CK+GK D A + M G S D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VT TLID CK G +A +++ + + + +LN IL L K+ E +L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+K G V+Y TL+ G R + ++ + MK +P+ + Y +I GL Q G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+ E+A +L+ + SG+ P+ T+ ++ G+ + G++++AL+ MVE+ ++ + +
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
LL G ++L K +D+ +T+ +E E L+S +E+
Sbjct: 691 SLLQG----------------FVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
G + T L + GR +E+ ++E G
Sbjct: 735 G-GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 198/426 (46%), Gaps = 29/426 (6%)
Query: 93 AGMLEEAFRLRKEMESLKLLPDVV-----------TYNTLINRFFESGRSMEAFKLIDEL 141
+++E R KEM L D + Y++L+ + A+ +
Sbjct: 127 VALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRM 186
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
+ G + + ++ CK G + A + + + GF D +L+ C+ N+
Sbjct: 187 EADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNL 246
Query: 202 EEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
+A ++ DVM ++ N+++ + ++H LC +L+EA+ L + ++G +Y
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
LI ++A L+DEM R P+ TY +I GL + GK E+A + ++++
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
+ P T+N +I+G+C +G+V A + M +++ KP++ T N L+ GLCR G KA+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
+ + G + D V+YN LI LC+E + A+ LLS M + PD T+ AI A
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
+ G+ + A F +M+ G I ++ + I+ C G+ +D
Sbjct: 487 CKQGKADVASAFLGLMLRKG-----------------ISLDEVTGTTLIDGVCKVGKTRD 529
Query: 501 ALQIFE 506
AL I E
Sbjct: 530 ALFILE 535
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 89/461 (19%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P +TYN +++ K G++ +LL+ M+K+ PN T+N L+ G C++G +A+
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M N PD+ +YN+LI+G C G + A++L M + PD +T+ +IN F
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK--------------------- 165
+ G++ A + + GI + VT +I CK GK
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 166 --------IDKACKI------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
+ K CK+ + + + G P VTY TL+D ++G++ +FR++++M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
G N I++ LC +++EA LL++ G + V+Y ++ GY + K
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWG-------------------------------- 299
+RAL+ M ER + Y++++ G
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 300 ---------------------LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
L + G+T+++ D++ +L+ G+ E + I+ +CS+
Sbjct: 728 ISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSK 786
Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
+ K ++ +++ F P + +++ GL +EG E+A
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 263/525 (50%), Gaps = 21/525 (4%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V +N +L A+ K K V L M+ G+ + TY+I ++ +C+ L A+
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
V+ M + PD+ T + L+NG+C++ + +A L +M + PD T+ TLI+ F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA L+D++ + G +P+ VT+ ++ CK G ID A +++ ME+ D V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
YNT+ID CK +M++A + M KG++ + T ++++ LC + +A LL+
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R + V++ LI + ++ K A KL+DEM +R I P FTY+++I G +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ P+ T++T+I GFC +VE+ ++ +M ++ + VT L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G + + A F+ + G + +TYN L+ LCK +L A + ++ +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
PD YTY + + ++G++E+ + + G + P+ I+Y+
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG-----------------VSPNVIAYN 542
Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
I+ C +G ++A + ++ ++ G N TY N LI+ R
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY----NTLIRAR 583
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 237/449 (52%), Gaps = 1/449 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD T+ T++ LF K +E L+ M ++G P+ TY +V+G CK G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ A+ ++ M + K DV YN +I+G C +++A L EM++ + PDV TY++
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ GR +A +L+ ++ E I PN VT + +I + KEGK+ +A K+ M +
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TY++LI+ C ++EA M ++M K N +T +T++ C K+++E
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S+RG + V+Y TLI G+F+ + A ++ +M + P+ TYN ++ GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++GK +A+ + L +S M PD T+N +I G C G+VE + + K P++
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+ N ++SG CR+G E+A + G +S TYNTLI + ++ E + L+ E
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
M D T + T ++ GRL+++
Sbjct: 599 MRSCGFAGDASTIGLV-TNMLHDGRLDKS 626
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 243/460 (52%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD VT +++L+ ++++ L+ M + G P+ T+ L+ G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ +VD M Q PD+ TY ++NG C G ++ A L K+ME K+ DVV YNT
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ + +A L E+D GI+P+ T++ +I C G+ A +++ +M E
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT++ LIDA K G + EA ++ D M ++ + + T +++++ C +LDEA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + + V+Y TLI G+ + ++ ++L+ EM +R ++ +T TY +I G
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+ + A + +++ G+ P+ T+N ++ G C G++ KA+ + + +PDI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ G+C+ G +E + F + LKG + + + YNT+IS C++ E+A LL +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
M+E P+ TY + A + G E + + M G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 245/519 (47%), Gaps = 17/519 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ G D TY+ ++ ++ +L+ +L+ M K G P+ T + L++GYC
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ +A+ +VD M + PD +T+ LI+G EA L +M PD+VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
++N + G A L+ ++++ I+ + V +N +I CK +D A + M+ G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TY++LI C G +A R++ M + + N +T + ++ E KL EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L + KR D +Y +LI G+ ++ + A +++ M + P+ TY+ +I G
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++ + E+ +++ E+ Q G++ + T+ T+IHGF + A +MV P+I
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+T NILL GLC+ G L KA+ F D TYN +I +CK ++ED + L
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
+ K + P+ Y + + G EEA M E G + P
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-----------------P 571
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
+S +Y+ I G + + ++ +E R G A + ST
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 219/411 (53%), Gaps = 1/411 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC PD VTY T+++ L K+G ++ LL M+K + + YN ++ G CK + +A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ + M PDV+TY+ LI+ CN G +A RL +M K+ P+VVT++ LI+
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F + G+ +EA KL DE+ + I P+ T++ +I +C ++D+A + M P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTY+TLI CKA +EE + M ++GL NT+T T++H + D A M+
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
G + + ++Y L+ G ++ K +A+ +++ ++ + P +TYN MI G+ ++G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K E ++ L G+ P+ +NT+I GFC +G E+A KM E P+ T N
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
L+ R+G E + + + G A D+ T L++++ + RL+ +F
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 255/506 (50%), Gaps = 17/506 (3%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
K+++ DL DM K P+ +N L+S K+ + + + + M D++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 85 MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
+ IN +C L A + +M L PD+VT ++L+N + S R +A L+D++ E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
G KP+ T +I K +A +V M + G PD VTY T+++ CK G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
++ M + ++ + + NTI+ LC K +D+A L +G D +Y +LI+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
+ + A +L +M ER+I P+ T++A+I + GK +A + +E+++ + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
T++++I+GFC ++++A M+ K P++VT + L+ G C+ +E+ ++ FR
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
+G ++VTY TLI + R ++A + +M + P+ TY + L ++G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
+L +A + + +Q +T ++P +Y+ I C G+ +D ++
Sbjct: 483 KLAKAM-----------VVFEYLQRST------MEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
F KG++ N Y +++G ++
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRK 551
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 17/368 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D A + +M ++ P V +N L+ A K E + + M G+ + T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
++ C +L A +L K GY D V+ +L+ GY ++ + A+ L D+M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
P TFT+ +I GL K +A+ ++++++Q G PD T+ T+++G C G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
L KM + + D+V N ++ GLC+ ++ AL F KG D TY++LIS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
LC R DA LLS+M E+K+ P+ T++A+ A V+ G+L EA+K M++
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 356
Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
IDP +YS IN C R +A +FE K N TY L+
Sbjct: 357 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 525 NGLIKRRK 532
G K ++
Sbjct: 406 KGFCKAKR 413
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 198/411 (48%), Gaps = 17/411 (4%)
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L NR + + +A L ++ + P+ V N ++ K K + + M+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
S D TY+ I+ C+ + A ++ M + G + + +TL+++L+ C K++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L++ + GY D ++ TLI G F KA+ A+ L D+M +R P TY ++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ G + A+ +L ++ + + D +NTII G C ++ AL +M K +PD+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T + L+S LC G A + I + + VT++ LI + KE +L +A L E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ + PD +TY+++ RL+EA+ +M+ ++ P
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-----------------KDCFP 396
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
+ ++YS I C R ++ +++F E Q+G+ N TY L++G + R
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
K+D+A L K + V + L++ + K + L ++M+ I +TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
I + + A+ +L ++++ G PD T +++++G+C ++ A+ ++MVE
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
+KPD T L+ GL +A+ + +G D VTY T+++ LCK ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
LL +ME+ K+ D Y I L + +++A + M G
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-------------- 288
Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
I P +YS I+ C+ GR+ DA ++ + ++ I N T+ L++ +K K +
Sbjct: 289 ---IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 257/506 (50%), Gaps = 17/506 (3%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP +N +L A+ K K + V L M++ G+ N TYNIL++ +C+ + A+
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T + L+NG+C+ + +A L +M + PD +T+ TLI+ F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA L+D + + G +PN VT+ +++ CK G ID A ++ ME + V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
Y+T+ID+ CK + ++A + M KG++ N IT ++++ LC ++ +A LL+
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+R + V++ LI + ++ K A KL+DEM +R I P FTY+++I G +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ P+ T+NT+I+GFC ++++ ++ +M ++ + VT L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G + + A F+ + G + +TYNTL+ LCK +LE A + ++ K+
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
P YTY + + ++G++E+ + G + P I Y+
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-----------------VKPDVIIYN 544
Query: 487 EKINEHCSQGRYKDALQIFEETRQKG 512
I+ C +G ++A +F + R+ G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 231/432 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P VT +++L+ ++++ L+ M + G P+ T+ L+ G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ +VD M Q P++ TY +++NG C G ++ AF L +ME+ K+ +VV Y+T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ + +A L E++ G++PN +T++ +I C + A +++ +M E
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+P+ VT+N LIDA K G + EA ++ D M ++ + + T +++++ C +LDEA
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ + + + V+Y TLI G+ + ++ + ++L+ EM +R ++ +T TY +I G
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
Q+ + A + +++ G+ P+ T+NT++ G C G++EKA+ + +P I
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NI++ G+C+ G +E F S LKG D + YNT+IS C++ E+A L +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 421 MEEKKLGPDRYT 432
M E PD T
Sbjct: 566 MREDGPLPDSGT 577
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 234/472 (49%), Gaps = 17/472 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ LP ++ +N L++ + L ++M+ L + ++ TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + A L+ ++ + G +P+ VT + ++ YC +I A +V M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD +T+ TLI EA ++D M ++G + N +T +++ LC +D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LLN + V Y T+I + + AL L+ EM+ + + P+ TY+++I L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ A +L+++++ + P+ TFN +I F EG++ +A + +++M+++S PDI
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T + L++G C L++A F I K + VTYNTLI+ CK +R+++ L E
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ L + TY + ++ + AQ MV G + P
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-----------------VHP 468
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+ ++Y+ ++ C G+ + A+ +FE ++ + TY ++ G+ K K
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 166/372 (44%), Gaps = 20/372 (5%)
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
FS Y ++ + +++A + M + + N +L + KK D
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
L + G + +Y LI + R + + AL L +M + PS T ++++ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
+ A+ +++++++ G PD TF T+IHG + +A+ ++MV++ +P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
+VT ++++GLC+ G ++ A + V Y+T+I SLCK R +DA L +
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------- 471
EME K + P+ TY+++ + L R +A + S M+E KIN VV N
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKE 343
Query: 472 -----------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
IDP +YS IN C R +A +FE K N TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 521 MNLMNGLIKRRK 532
L+NG K ++
Sbjct: 404 NTLINGFCKAKR 415
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 41/214 (19%)
Query: 347 FHNKMVEKSFKPDIVTCNILLSGLC-----------------REGI----LEKALKFFRS 385
F ++ ++ P I +I L G+C R G+ L+ A+ F
Sbjct: 16 FVHRNLQGKGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLF-G 74
Query: 386 WILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
++K + + S+ +N L+S++ K ++ + L +M+ + + YTY +
Sbjct: 75 GMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134
Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
++ A M++ G +PS ++ S +N +C R DA+ +
Sbjct: 135 QISLALALLGKMMKLG-----------------YEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
++ + G + T+ L++GL K+ S+AV
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKA-SEAV 210
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 240/472 (50%), Gaps = 19/472 (4%)
Query: 4 FGCLPDNVTYNTILDALFKKGKLNEVRDLLS---------------DMKKQGLVPNRTTY 48
G PD VT+NT+L L + +++E L M + GL P T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 49 NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
N L++G C G + EA +V+ M DV TY ++NG C G + A L +ME
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
+ PDVV Y+ +I+R + G +A L E+ E GI PN T+N MI +C G+
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
A +++R+M E +PD +T+N LI A+ K G + EA ++ D M + + +T+T N++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
C + D+A + + + D V++ T+I Y R ++ + ++L E+ R ++
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
+T TYN +I G + A D+ E++ G+ PD T N +++GFC ++E+AL+
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
+ D V NI++ G+C+ +++A F S + G D TYN +IS C +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
+ DA L +M++ PD TY + +++G ++++ + S M G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 229/449 (51%), Gaps = 5/449 (1%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P +T+NT+++ L +G++ E L++ M +GL + TY +V+G CK+G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
K A+ ++ M + PDV Y+ +I+ C G +A L EM + P+V TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ F GR +A +L+ ++ E I P+ +T N +I KEGK+ +A K+ M
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD VTYN++I CK ++A M D+M + +T NTI+ C K++DE
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 452
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL S+RG + +Y TLI G+ + N A L+ EM + P T T N +++G
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
++ K E+A+++ + S + D +N IIHG C +V++A + +PD+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T N+++SG C + + A F G D+ TYNTLI K ++ + L+SE
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
M D +T + L+ GRL+++
Sbjct: 633 MRSNGFSGDAFTIKMV-ADLITDGRLDKS 660
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 223/415 (53%), Gaps = 5/415 (1%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G G D VTY TI++ + K G +LLS M++ + P+ Y+ ++ CK G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+A + M + P+V+TYN +I+G+C+ G +A RL ++M ++ PDV+T+N
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ + G+ EA KL DE+ I P+ VT+N MI +CK + D A ++M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 427
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
SPD VT+NT+ID C+A ++E +++ + R+GL NT T NT++H C L+ A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L G D ++ L+ G+ +EK AL+L++ ++ +I T YN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ K ++A D+ L G+ PD T+N +I GFC + + A +KM + +PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
T N L+ G + G ++K+++ G + D+ T +++ L + RL+ +F
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 661
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 242/551 (43%), Gaps = 65/551 (11%)
Query: 11 VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
V N ++ + + + L M+ + + N ++NIL+ +C L ++
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 71 MTQNKSLPDVWTYNMLINGWC----------------NAGMLEEAFRLRKEMESLKLLPD 114
+T+ PDV T+N L++G C G L EA L +M + L P
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPV 225
Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
V+T+NTLIN GR +EA L++++ G+ + VT+ ++ CK G A ++
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
MEE PD V Y+ +ID CK G+ +A + M KG+ N T N ++ C
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
+ +A LL +R D +++ LI+ ++ K A KL DEM R I P T TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 295 AMIWGL-------------------------------SQSGKTEQAIDMLNELLQSGMIP 323
+MI+G ++ + ++ + +L E+ + G++
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
+ TT+NT+IHGFC + A +M+ PD +TCNILL G C LE+AL+ F
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
+ +D+V YN +I +CK ++++A+ L + + PD TY + +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
+ +A M + G +P + +Y+ I G +++
Sbjct: 586 SAISDANVLFHKMKDNGH-----------------EPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 504 IFEETRQKGIA 514
+ E R G +
Sbjct: 629 LISEMRSNGFS 639
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 209/470 (44%), Gaps = 37/470 (7%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L++A M + V N +I F R A L +++ I N + NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF---------- 205
+IK +C K+ + + + GF PD VT+NTL+ C + EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 206 -----RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
+ D M GL IT NT+++ LC E ++ EA L+N +G ++D V+YGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
++ G + AL L +M+E I P Y+A+I L + G A + +E+L+ G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
+ P+ T+N +I GFCS G+ A + M+E+ PD++T N L+S +EG L +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
K + + D+VTYN++I CK R +DA + M PD T+ I
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID------------------PSS 482
+ R++E + + G + + E+D P +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
I+ + + C + ++AL++FE + I ++ Y +++G+ K K
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 162/308 (52%), Gaps = 6/308 (1%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD +T+N ++ A K+GKL E L +M + + P+ TYN ++ G+CK +A +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
DLM PDV T+N +I+ +C A ++E +L +E+ L+ + TYNTLI+ F E
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
A L E+ HG+ P+ +T NI++ +C+ K+++A ++ ++ + D V
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
YN +I CK ++EA+ + + G++ + T N ++ C + + +A +L +
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
G+ D +Y TLI G + + +++++L EM+ FT M+ L G+ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLD 658
Query: 308 QAI-DMLN 314
++ DML+
Sbjct: 659 KSFSDMLS 666
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 32/314 (10%)
Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
K LD+A + + + V +I + R + + A+ L+ +M+ R+I + +++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
N +I K ++ +L + G PD TFNT++HG C E ++ +AL MVE
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 354 KSF---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
F P ++T N L++GLC EG + +A + KG +D VTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
T+++ +CK + A LLS+MEE + PD Y+AI L + G +AQ S M+E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
G I P+ +Y+ I+ CS GR+ DA ++ + ++ I +
Sbjct: 325 KG-----------------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 519 TYMNLMNGLIKRRK 532
T+ L++ +K K
Sbjct: 368 TFNALISASVKEGK 381
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 260/527 (49%), Gaps = 18/527 (3%)
Query: 11 VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
V+Y L + K ++ DL +M + P ++ L S + + +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 71 MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
M +++T +++IN C L AF ++ L PD VT++TLIN GR
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
EA +L+D + E G KP +T N ++ C GK+ A ++ M E GF P+ VTY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
++ CK+G A ++ M + +K++ + + I+ LC + LD A+ L N +G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
+ D + Y TLI G+ + + KL +M +R+I P ++A+I + GK +A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
++ E++Q G+ PD T+ ++I GFC E Q++KA + MV K P+I T NIL++G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
C+ +++ L+ FR L+G D+VTYNTLI C+ +LE A L EM +++ PD
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
+Y + L ++G E+A + + K+ E+D Y+ I+
Sbjct: 458 VSYKILLDGLCDNGEPEKALE---------------IFEKIEKSKMELDIGI--YNIIIH 500
Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
C+ + DA +F KG+ + TY ++ GL K + S+S+A
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK-KGSLSEA 546
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 253/508 (49%), Gaps = 17/508 (3%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
T + +++ + KL+ + + K G P+ T++ L++G C G + EA+ +VD M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+ P + T N L+NG C G + +A L M P+ VTY ++ +SG++
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
A +L+ +++E IK +AV ++I+I CK+G +D A + ME GF D + Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
I C AG ++ +++ M ++ + + + + ++ E KL EA L +RG
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
D V+Y +LI G+ ++ + ++A + D M + P+ T+N +I G ++ + ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+ ++ G++ D T+NT+I GFC G++E A + +MV + +PDIV+ ILL GLC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
G EKAL+ F +D YN +I +C +++DA+ L + K + PD
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
TY + L + G L EA M E G P+ +Y+ I
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGH-----------------SPNGCTYNILIRA 571
Query: 492 HCSQGRYKDALQIFEETRQKGIAINKST 519
H +G + ++ EE ++ G +++ ST
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 230/442 (52%), Gaps = 1/442 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P +T N +++ L GK+++ L+ M + G PN TY ++ CK G AM +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M + K D Y+++I+G C G L+ AF L EME D++ Y TLI F
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
+GR + KL+ ++ + I P+ V + +I + KEGK+ +A ++ + M + G SPD VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
Y +LID CK +++A M+D+M KG N T N +++ C +D+ L S
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
RG D V+Y TLI G+ K A +L+ EM R++ P +Y ++ GL +G+ E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+A+++ ++ +S M D +N IIHG C+ +V+ A + K KPD+ T NI++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
GLC++G L +A FR G + + TYN LI + E + L+ E++
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 428 PDRYTYAAIHTALVESGRLEEA 449
D T + ++ GRL+++
Sbjct: 595 VDASTVKMV-VDMLSDGRLKKS 615
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 234/445 (52%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD VT++T+++ L +G+++E +L+ M + G P T N LV+G C G + +A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M + P+ TY ++ C +G A L ++ME K+ D V Y+ +I+ +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G AF L +E++ G K + + + +I+ +C G+ D K++R+M + +PD V
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
++ LID K G + EA + M ++G+ +T+T +++ C E +LD+A +L+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
+G + ++ LI GY + + L+L+ +M R ++ T TYN +I G + GK E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
A ++ E++ + PD ++ ++ G C G+ EKAL+ K+ + + DI NI++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
G+C ++ A F S LKG D TYN +I LCK+ L +A L +MEE
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
P+ TY + A + G ++ K
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKL 584
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 211/411 (51%), Gaps = 1/411 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P+ VTY +L + K G+ +LL M+++ + + Y+I++ G CK G L A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ + M D+ Y LI G+C AG ++ +L ++M K+ PDVV ++ LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F + G+ EA +L E+ + GI P+ VT+ +I +CKE ++DKA ++ M G P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
T+N LI+ CKA +++ + M +G+ +T+T NT++ C KL+ A L
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
R D VSY L+ G + + +AL++++++++ ++ YN +I G+ +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
K + A D+ L G+ PD T+N +I G C +G + +A KM E P+ T N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
IL+ EG K+ K G +VD+ T ++ L + RL+ +F
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 17/273 (6%)
Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
+VSY + D K + A+ L+ EM + P ++ + ++++ + + +D+
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
++ G+ + T + +I+ C ++ A K+++ ++PD VT + L++GLC EG
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156
Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
+ +AL+ + G +T N L++ LC ++ DA L+ M E P+ TY
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
+ + +SG+ A + M E +I ++ YS I+ C
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEE-----------------RKIKLDAVKYSIIIDGLCK 259
Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
G +A +F E KG + Y L+ G
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 243/504 (48%), Gaps = 18/504 (3%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
T+N +L L KKG + E LL + K+G++PN TYN+ + G C+ G L A+R+V +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+ PDV TYN LI G C +EA +M + L PD TYNTLI + + G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
A +++ + +G P+ T+ +I C EG+ ++A + G P+ + YNTL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
I G + EA ++ + M KGL T N +++ LC + +A L+ +GY
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
+ D ++ LI GY K AL++ D M + + P +TYN+++ GL ++ K E ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+++ G P+ TFN ++ C ++++AL +M KS PD VT L+ G C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 372 REGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
+ G L+ A FR K S TYN +I + ++ + A L EM ++ LGPD
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
YTY + ++G + KF M+E G I PS + IN
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI-----------------PSLTTLGRVIN 680
Query: 491 EHCSQGRYKDALQIFEETRQKGIA 514
C + R +A I QKG+
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 246/510 (48%), Gaps = 17/510 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ + C P +YN I+ L G ++ + M+ +G+ P+ ++ I + +CK
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
A+R+++ M+ +V Y ++ G+ E + L +M + + + T+N
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+ + G E KL+D++ + G+ PN T+N+ I+ C+ G++D A ++V + E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD +TYN LI CK +EA + M +GL+ ++ T NT++ C + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
++ A G+ D+ +Y +LI G + + NRAL L++E + I P+ YN +I GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
S G +A + NE+ + G+IP+ TFN +++G C G V A M+ K + PDI
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T NIL+ G + +E AL+ + G D TYN+L++ LCK + ED
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M EK P+ +T+ + +L +L+EA M + ++P
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM-----------------KNKSVNP 564
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
++++ I+ C G A +F + +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 231 bits (590), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 242/508 (47%), Gaps = 17/508 (3%)
Query: 22 KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
+KGK+ E ++ M P +YN ++S G+ +A +V M PDV+
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
++ + + +C A RL M S +VV Y T++ F+E E ++L ++
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
G+ T N +++ CK+G + + K++ + + G P+ TYN I C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
+ A RM+ + +G K + IT N +++ LC K EA + L G D +Y TL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
I GY + A ++ + +P FTY ++I GL G+T +A+ + NE L G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
P+ +NT+I G ++G + +A Q N+M EK P++ T NIL++GLC+ G + A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
+ I KG D T+N LI + ++E+A +L M + + PD YTY ++ L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
++ + E+ + MVE G P+ +++ + C + +A
Sbjct: 508 KTSKFEDVMETYKTMVEKG-----------------CAPNLFTFNILLESLCRYRKLDEA 550
Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
L + EE + K + + T+ L++G K
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 214/432 (49%), Gaps = 7/432 (1%)
Query: 5 GCL------PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
GCL PD +TYN ++ L K K E L M +GL P+ TYN L++GYCK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 59 GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
G ++ A R+V N +PD +TY LI+G C+ G A L E + P+V+ Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
NTLI G +EA +L +E+ E G+ P T NI++ CK G + A +V+ M
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
G+ PD T+N LI ME A ++DVM G+ + T N++L+ LC K ++
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
+ ++G + ++ L+ R K + AL L +EMK + + P T+ +I
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDET-TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
G ++G + A + ++ ++ + T T+N IIH F + V A + +MV++
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
PD T +++ G C+ G + KF + G T +I+ LC E R+ +A G+
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 418 LSEMEEKKLGPD 429
+ M +K L P+
Sbjct: 695 IHRMVQKGLVPE 706
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 222/464 (47%), Gaps = 3/464 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G LP+ TYN + L ++G+L+ ++ + +QG P+ TYN L+ G CK +EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ M PD +TYN LI G+C GM++ A R+ + +PD TY +LI+
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
G + A L +E GIKPN + +N +IK +G I +A ++ M E G P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
T+N L++ CK G + +A ++ VM KG + T N ++H + K++ A +L+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
G D +Y +L+ G + K ++ + M E+ P+ FT+N ++ L +
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK--PDIVT 362
K ++A+ +L E+ + PD TF T+I GFC G ++ A KM E+++K T
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPT 604
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
NI++ + + A K F+ + + D TY ++ CK + + L EM
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
E P T + L R+ EA MV+ G + V
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 257/524 (49%), Gaps = 22/524 (4%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRVV 68
TY ++++ L GK + ++L DM++ V N + V Y + G ++EA+ V
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 69 DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
+ M P V++YN +++ ++G ++A ++ M + PDV ++ + F ++
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
R A +L++ + G + N V + ++ + +E + ++ M +G S T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
N L+ CK G+++E +++D + ++G+ N T N + LC +LD A ++ +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
+G D ++Y LI G ++ K A +M + P ++TYN +I G + G +
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
A ++ + + +G +PD+ T+ ++I G C EG+ +AL N+ + K KP+++ N L+
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
GL +G++ +A + KG + T+N L++ LCK + DA GL+ M K P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
D +T+ + ++E A + +M++ G +DP +Y+
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNG-----------------VDPDVYTYNSL 502
Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+N C +++D ++ ++ +KG A N T+ L+ L + RK
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 6/222 (2%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD TYN++L+ L K K +V + M ++G PN T+NIL+ C+ L EA
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 65 MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLI 122
+ +++ M +NKS+ PD T+ LI+G+C G L+ A+ L ++ME + K+ TYN +I
Sbjct: 551 LGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
+ F E A KL E+ + + P+ T+ +M+ +CK G ++ K + M ENGF
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL---KMNTI 221
P T +I+ C + EA ++ M +KGL +NTI
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI 711
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 236/456 (51%), Gaps = 1/456 (0%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD + ++ F + + ++ ++K G P+ YN L++G+CK+ + +A RV
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M PD TYN++I C+ G L+ A ++ ++ S P V+TY LI
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G EA KL+DE+ G+KP+ T+N +I+ CKEG +D+A ++VRN+E G PD ++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
YN L+ A G EE ++M M + N +T + ++ TLC + K++EA LL
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
++G D SY LI + R+ + + A++ + M +P YN ++ L ++GK +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
QA+++ +L + G P+ +++NT+ S G +AL +M+ PD +T N ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
S LCREG++++A + VTYN ++ CK R+EDA +L M
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
P+ TY + + +G EA + + +V I+
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 1/439 (0%)
Query: 22 KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
+ G E LL M ++G P+ L+ G+ L + +A+RV++++ + PDV+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPDVF 159
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
YN LING+C +++A R+ M S PD VTYN +I G+ A K++++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
+P +T+ I+I+ EG +D+A K++ M G PD TYNT+I CK G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
+ AF M+ + KG + + I+ N +L L + K +E L+ + V+Y L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
IT RD K A+ L MKE+ + P ++Y+ +I + G+ + AI+ L ++ G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
+PD +NT++ C G+ ++AL+ K+ E P+ + N + S L G +AL
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
+ G D +TYN++IS LC+E +++AF LL +M + P TY +
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 442 ESGRLEEAQKFTSIMVETG 460
++ R+E+A MV G
Sbjct: 520 KAHRIEDAINVLESMVGNG 538
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 1/405 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
+E FG PD YN +++ K ++++ +L M+ + P+ TYNI++ C G
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L A++V++ + + P V TY +LI G ++EA +L EM S L PD+ TYNT
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I + G AF+++ L+ G +P+ +++NI+++ +GK ++ K++ M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ VTY+ LI C+ G +EEA ++ +M KGL + + + ++ C E +LD A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L + G D V+Y T++ ++ KA++AL+++ ++ E P++ +YN M L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
SG +A+ M+ E++ +G+ PDE T+N++I C EG V++A + M F P +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
VT NI+L G C+ +E A+ S + G + TY LI +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 235/472 (49%), Gaps = 18/472 (3%)
Query: 56 CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
C+ G E++ +++ M + PDV LI G+ + +A R+ + +E PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
YN LIN F + R +A +++D + P+ VT+NIMI C GK+D A K++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
+ + P +TY LI+A G ++EA ++MD M +GLK + T NTI+ +C E
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
+D A+ ++ + +G D +SY L+ K KL +M + P+ TY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
+I L + GK E+A+++L + + G+ PD +++ +I FC EG+++ A++F M+
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
PDIV N +L+ LC+ G ++AL+ F G + +S +YNT+ S+L A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
++ EM + PD TY ++ + L G ++EA + M
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC---------------- 502
Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
E PS ++Y+ + C R +DA+ + E G N++TY L+ G+
Sbjct: 503 -EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 191/359 (53%), Gaps = 8/359 (2%)
Query: 6 CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
C P +TY +++A +G ++E L+ +M +GL P+ TYN ++ G CK G + A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 66 RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
+V + PDV +YN+L+ N G EE +L +M S K P+VVTY+ LI
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
G+ EA L+ + E G+ P+A +++ +I +C+EG++D A + + M +G PD
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-CCEKKLDEAYMLLN 244
V YNT++ CK G ++A + +G G N+ + NT+ L K+ +M+L
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S G DE++Y ++I+ R+ + A +L +M+ + PS TYN ++ G ++
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------EKSFK 357
+ E AI++L ++ +G P+ETT+ +I G G +A++ N +V E SFK
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 18/442 (4%)
Query: 91 CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
C +G E+ L + M PDV+ LI FF +A ++++ L++ G +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
+N +I +CK +ID A +++ M FSPD VTYN +I + C G ++ A ++++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
+ + IT ++ E +DEA L++ RG D +Y T+I G ++
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
+RA ++ ++ + P +YN ++ L GK E+ ++ ++ P+ T++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
+I C +G++E+A+ M EK PD + + L++ CREG L+ A++F + I G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
D V YNT++++LCK + + A + ++ E P+ +Y + +AL SG A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
M+ G IDP I+Y+ I+ C +G +A ++ + R
Sbjct: 459 HMILEMMSNG-----------------IDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
+ TY ++ G K +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHR 523
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 53/368 (14%)
Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
+C++GN E+ +++ M RKG + I ++ + + +A ++ K G D
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-D 157
Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
+Y LI G+ + + + A ++ D M+ + P T TYN MI L GK + A+ +LN
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
+LL P T+ +I EG V++AL+ ++M+ + KPD+ T N ++ G+C+EG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 375 ILEKALKFFRSWILKGKAVDSVTYN----------------------------------- 399
++++A + R+ LKG D ++YN
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
LI++LC++ ++E+A LL M+EK L PD Y+Y + A GRL+ A +F M+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
G + P ++Y+ + C G+ AL+IF + + G + N S+
Sbjct: 398 GCL-----------------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 520 YMNLMNGL 527
Y + + L
Sbjct: 441 YNTMFSAL 448
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 18/304 (5%)
Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
I H C E+ LL + ++GY D + LI G+F +A+++ E+ E+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
P F YNA+I G + + + A +L+ + PD T+N +I CS G+++ AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
+ N+++ + +P ++T IL+ EG +++ALK + +G D TYNT+I +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
CKE ++ AF ++ +E K PD +Y + AL+ G+ EE +K + M
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS------- 326
Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
E+ DP+ ++YS I C G+ ++A+ + + ++KG+ + +Y L+
Sbjct: 327 ----------EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 526 GLIK 529
+
Sbjct: 377 AFCR 380
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
+T I H C G ++L MV K + PD++ C L+ G + KA++
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
G+ D YN LI+ CK R++DA +L M K PD TY + +L G
Sbjct: 149 ILEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
+L+ A K+ +Q++ N P+ I+Y+ I +G +AL++
Sbjct: 208 KLDLAL----------KVLNQLLSDNCQ-------PTVITYTILIEATMLEGGVDEALKL 250
Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
+E +G+ + TY ++ G+ K
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCK 275
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 228/430 (53%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G PD ++Y+T+++ + G+L++V L+ MK++GL PN Y ++ C++
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA M + LPD Y LI+G+C G + A + EM S + PDV+TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+I+ F + G +EA KL E+ G++P++VT +I YCK G + A ++ +M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
SP+ VTY TLID CK G+++ A ++ M + GL+ N T N+I++ LC ++EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L+ G D V+Y TL+ Y + + ++A ++ EM + + P+ T+N ++ G
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G E +LN +L G+ P+ TTFN+++ +C ++ A + M + PD
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T L+ G C+ +++A F+ KG +V TY+ LI K ++ +A + +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 421 MEEKKLGPDR 430
M + L D+
Sbjct: 692 MRREGLAADK 701
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 17/489 (3%)
Query: 32 LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
+ + + G+ N +YNI++ C+LG +KEA ++ LM PDV +Y+ ++NG+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 92 NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
G L++ ++L + M+ L P+ Y ++I + EA + E+ GI P+ V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
+ +I +CK G I A K M +PD +TY +I C+ G+M EA ++ M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
KGL+ +++T +++ C + +A+ + N + G + V+Y TLI G ++
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+ A +L EM + + P+ FTYN+++ GL +SG E+A+ ++ E +G+ D T+ T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
+ +C G+++KA + +M+ K +P IVT N+L++G C G+LE K + KG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
A ++ T+N+L+ C L+ A + +M + +GPD TY + ++ ++EA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
M G S +YS I + ++ +A ++F++ R++
Sbjct: 653 LFQEMKGKG-----------------FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 512 GIAINKSTY 520
G+A +K +
Sbjct: 696 GLAADKEIF 704
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 247/501 (49%), Gaps = 30/501 (5%)
Query: 60 WLKEAMRVVDLMTQNKSL---------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
W + + V D Q L D +++ + G+L EA R+ ++M +
Sbjct: 146 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 205
Query: 111 LLPDVVTYNTLINRFF-ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
L+ V + N + R + ++ A + E E G+ N ++NI+I + C+ G+I +A
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 265
Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
++ ME G++PD ++Y+T+++ C+ G +++ +++++VM RKGLK N+ +I+
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
LC KL EA + ++G D V Y TLI G+ + A K + EM R I P
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
TY A+I G Q G +A + +E+ G+ PD TF +I+G+C G ++ A + HN
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
M++ P++VT L+ GLC+EG L+ A + G + TYN++++ LCK
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
+E+A L+ E E L D TY + A +SG +++AQ+ M+ G + +V
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTF 564
Query: 470 NTSKT-------------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
N + I P++ +++ + ++C + K A I+++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 511 KGIAINKSTYMNLMNGLIKRR 531
+G+ + TY NL+ G K R
Sbjct: 625 RGVGPDGKTYENLVKGHCKAR 645
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 226/449 (50%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
+YN ++ + + G++ E LL M+ +G P+ +Y+ +V+GYC+ G L + +++++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+ P+ + Y +I C L EA EM +LPD V Y TLI+ F + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
A K E+ I P+ +T+ +I +C+ G + +A K+ M G PD VT+ L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
I+ CKAG+M++AFR+ + M + G N +T T++ LC E LD A LL+ K G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
+ +Y +++ G + A+KL E + + T TY ++ +SG+ ++A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+L E+L G+ P TFN +++GFC G +E + N M+ K P+ T N L+ C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
L+ A ++ +G D TY L+ CK R +++A+ L EM+ K
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
TY+ + ++ + EA++ M G
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 149/283 (52%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
GC P+ VTY T++D L K+G L+ +LL +M K GL PN TYN +V+G CK G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+++V D TY L++ +C +G +++A + KEM L P +VT+N L+N
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F G + KL++ + GI PNA T N ++K YC + A I ++M G PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
TY L+ +CKA NM+EA+ + M KG ++ T + ++ KK EA + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
+ G D+ + ++ ++ + + DE+ E ++
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 229/422 (54%), Gaps = 3/422 (0%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP V ++ +L + K + V L M+ G+ + +YNI+++ C+ A+
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
VV M + PDV T + LING+C + +A L +ME + PDVV YNT+I+
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ G +A +L D ++ G++ +AVT+N ++ C G+ A +++R+M P+ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
T+ +ID K G EA ++ + M R+ + + T N++++ LC ++DEA +L+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+G D V+Y TLI G+ + ++ + KL+ EM +R ++ T TYN +I G Q+G+
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
+ A ++ + + P+ T++ +++G C +VEKAL M + + DI T NI+
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G+C+ G +E A FRS KG D V+Y T+IS C++R+ + + L +M+E L
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 427 GP 428
P
Sbjct: 483 LP 484
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 3/384 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G D +YN +++ L + + ++ M K G P+ T + L++G+C+
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ +A+ +V M + PDV YN +I+G C G++ +A L ME + D VTYN+
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+ SGR +A +L+ ++ I PN +T +I + KEGK +A K+ M
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD TYN+LI+ C G ++EA +M+D+M KG + +T NT+++ C K++DE
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L ++RG D ++Y T+I GYF+ + + A +++ M R P+ TY+ +++GL
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ + E+A+ + + +S + D TT+N +IHG C G VE A + K KPD+
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 361 VTCNILLSGLCREGILEKALKFFR 384
V+ ++SG CR+ +K+ +R
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYR 475
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 215/432 (49%), Gaps = 32/432 (7%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L+E + + M Q++ LP + ++ +++ + + L ME + D+ +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+IN R + A ++ ++ + G +P+ VT + +I +C+ ++ A +V MEE G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
F PD V YNT+ID +CK G + +A + D M R G++ + +T N+++ LCC + +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L+ R + +++ +I + ++ K + A+KL++EM R + P FTYN++I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF---- 356
G+ ++A ML+ ++ G +PD T+NT+I+GFC +V++ + +M ++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 357 ----------------------------KPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
+P+I T +ILL GLC +EKAL F +
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
+D TYN +I +CK +EDA+ L + K L PD +Y + + + ++
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 449 AQKFTSIMVETG 460
+ M E G
Sbjct: 470 SDLLYRKMQEDG 481
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 20/437 (4%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
LEE L +M + LP +V ++ ++++ +S L ++ GI + ++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
+I C+ + A +V M + G+ PD VT ++LI+ C+ + +A ++ M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
+ + + NTI+ C +++A L + + G D V+Y +L+ G + + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
+L +M R I+P+ T+ A+I + GK +A+ + E+ + + PD T+N++I+G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
C G+V++A Q + MV K PD+VT N L++G C+ +++ K FR +G D+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
+TYNT+I + R + A + S M+ + P+ TY+ + L + R+E+A
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL----- 401
Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
V+ N K+ E+D ++ Y+ I+ C G +DA +F KG+
Sbjct: 402 ----------VLFENMQKSEIELDITT--YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 516 NKSTYMNLMNGLIKRRK 532
+ +Y +++G ++R+
Sbjct: 450 DVVSYTTMISGFCRKRQ 466
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 17/327 (5%)
Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
N+EE + M + + + + +L + K D L + G D SY
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
+I R + AL + +M + P T +++I G Q + AID+++++ +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
G PD +NTII G C G V A++ ++M + D VT N L++GLC G A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
+ R +++ + +T+ +I KE + +A L EM + + PD +TY ++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
L GR++EA++ +MV G + P ++Y+ IN C R
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCL-----------------PDVVTYNTLINGFCKSKRVD 331
Query: 500 DALQIFEETRQKGIAINKSTYMNLMNG 526
+ ++F E Q+G+ + TY ++ G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQG 358
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 17/191 (8%)
Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
S +E+ + KM++ P IV + +LS + + + + F + G D
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
+YN +I+ LC+ R A ++ +M + PD T +++ + R+ +A S M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
E G P + Y+ I+ C G DA+++F+ + G+ +
Sbjct: 166 EEMG-----------------FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 517 KSTYMNLMNGL 527
TY +L+ GL
Sbjct: 209 AVTYNSLVAGL 219
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 226/437 (51%), Gaps = 9/437 (2%)
Query: 36 MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
MK++G P T N +++ +L ++ A M + + +V+T+N++IN C G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L++A ME + P +VTYNTL+ F GR A +I E+ G +P+ T+N
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
++ W C EG+ A +++R M+E G PD V+YN LI G++E AF D M ++G
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
+ T NT++H L E K++ A +L+ ++G LD V+Y LI GY + A +A
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
L DEM I P+ FTY ++I+ L + KT +A ++ +++ GM PD NT++ G
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
C+ G +++A +M S PD VT N L+ GLC EG E+A + +G D
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
++YNTLIS K+ + AF + EM P TY A+ L ++ E A++
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 456 MVETGKINHQVVQPNTS 472
M G + PN S
Sbjct: 598 MKSEG------IVPNDS 608
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 187/369 (50%), Gaps = 38/369 (10%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME FG P VTYNT++ +G++ R ++S+MK +G P+ TYN ++S C G
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
E +R M + +PD +YN+LI G N G LE AF R EM ++P TYNT
Sbjct: 311 ASEVLRE---MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA----------- 169
LI+ F + A LI E+ E GI ++VT+NI+I YC+ G KA
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 170 ---------------CKIVRNMEEN---------GFSPDCVTYNTLIDANCKAGNMEEAF 205
C+ + E + G PD V NTL+D +C GNM+ AF
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
++ M + + +T N ++ LC E K +EA L+ +RG D +SY TLI+GY
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
+ A + DEM P+ TYNA++ GLS++ + E A ++L E+ G++P++
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 326 TTFNTIIHG 334
++F ++I
Sbjct: 608 SSFCSVIEA 616
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 205/436 (47%), Gaps = 38/436 (8%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P T N IL L + ++ +DM + + N T+NI+++ CK G LK+A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 65 MRVVDLM---------------TQNKSL--------------------PDVWTYNMLING 89
+ +M Q SL PD+ TYN +++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 90 WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
CN G E R EM+ + L+PD V+YN LI +G AF DE+ + G+ P
Sbjct: 305 MCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
T+N +I E KI+ A ++R + E G D VTYN LI+ C+ G+ ++AF + D
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
M G++ T ++++ LC + K EA L +G D V TL+ G+
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
+RA L EM I P TYN ++ GL GK E+A +++ E+ + G+ PD ++N
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
T+I G+ +G + A ++M+ F P ++T N LL GL + E A + R +
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 390 GKAVDSVTYNTLISSL 405
G + ++ ++I ++
Sbjct: 602 GIVPNDSSFCSVIEAM 617
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 190/401 (47%), Gaps = 23/401 (5%)
Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
+ + +++++ C+ +D+A + M+E GF P T N ++ + +E A+
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
M R +K N T N +++ LC E KL +A L G V+Y TL+ G+
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
+ A + EMK + P TYN ++ + G+ A ++L E+ + G++PD ++
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330
Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
N +I G + G +E A + ++MV++ P T N L+ GL E +E A R
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
KG +DSVTYN LI+ C+ + AF L EM + P ++TY ++ L + E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 449 AQKFTSIMVETGKINHQVVQPNT---------------SKTPE----EIDPSSISYSEKI 489
A + +V G + +V NT S E I+P ++Y+ +
Sbjct: 451 ADELFEKVVGKG-MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
C +G++++A ++ E +++GI + +Y L++G K+
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 21/325 (6%)
Query: 210 VMGRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
V+ L+ + L +L CC+ + +DEA ++G+Y + ++T R
Sbjct: 144 VLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRL 203
Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
+ A + +M +I + +T+N MI L + GK ++A L + G+ P T+
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
NT++ GF G++E A ++M K F+PD+ T N +LS +C EG +A + R
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKE 320
Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
G DSV+YN LI LE AF EM ++ + P YTY + L ++E
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
A+ + E G I S++Y+ IN +C G K A + +E
Sbjct: 381 AEILIREIREKG-----------------IVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 509 RQKGIAINKSTYMNLMNGLIKRRKS 533
GI + TY +L+ L ++ K+
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKT 448
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 229/420 (54%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V +N +L A+ K K + V L M+ G+ + T+NI+++ +C + A+
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + PD T L+NG+C + +A L +M + PD+V YN +I+
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ R +AF E++ GI+PN VT+ ++ C + A +++ +M + +P+ +
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
TY+ L+DA K G + EA + + M R + + +T +++++ LC ++DEA + +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+G D VSY TLI G+ + ++ +KL+ EM +R ++ +T TYN +I G Q+G
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A + +++ G+ PD T+N ++ G C G++EKAL M ++ DIVT +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G+C+ G +E+A F S LKG D VTY T++S LC + L + L ++M+++ L
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 224/439 (51%), Gaps = 6/439 (1%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
KLN+ DL SDM K P+ +N L+S KL K+ V+ L + + L D++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL---KKYDVVISLGKKMEVLGIRNDLY 121
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
T+N++IN +C + A + +M L PD VT +L+N F R +A L+D++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
E G KP+ V +N +I CK +++ A + +E G P+ VTY L++ C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
+A R++ M +K + N IT + +L K+ EA L + D V+Y +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
I G ++ + A +++D M + + +YN +I G ++ + E + + E+ Q G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
+ + T+NT+I GF G V+KA +F ++M PDI T NILL GLC G LEKAL
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
F + +D VTY T+I +CK ++E+A+ L + K L PD TY + + L
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 442 ESGRLEEAQKFTSIMVETG 460
G L E + + M + G
Sbjct: 482 TKGLLHEVEALYTKMKQEG 500
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 208/379 (54%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G D T+N +++ +++ +L M K G P+R T LV+G+C+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ +A+ +VD M + PD+ YN +I+ C + +AF KE+E + P+VVTY
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+N S R +A +L+ ++ + I PN +T++ ++ + K GK+ +A ++ M
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD VTY++LI+ C ++EA +M D+M KG + ++ NT+++ C K++++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S+RG + V+Y TLI G+F+ ++A + + +M I P +TYN ++ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+G+ E+A+ + ++ + M D T+ T+I G C G+VE+A + K KPDI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 361 VTCNILLSGLCREGILEKA 379
VT ++SGLC +G+L +
Sbjct: 471 VTYTTMMSGLCTKGLLHEV 489
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 229/459 (49%), Gaps = 17/459 (3%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L +A+ + M +++ P + +N L++ + L K+ME L + D+ T+N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
+IN F + A ++ ++ + G +P+ VT ++ +C+ ++ A +V M E G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ PD V YN +ID+ CK + +AF + RKG++ N +T +++ LC + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL+ K+ + ++Y L+ + ++ K A +L++EM I P TY+++I GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ ++A M + ++ G + D ++NT+I+GFC +VE ++ +M ++ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N L+ G + G ++KA +FF G + D TYN L+ LC LE A + +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M+++++ D TY + + ++G++EEA + G + P
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-----------------LKP 468
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
++Y+ ++ C++G + ++ + +Q+G+ N T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 220/432 (50%), Gaps = 17/432 (3%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L +A L +M + P +V +N L++ + + L +++ GI+ + T NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
+I +C ++ A I+ M + G+ PD VT +L++ C+ + +A ++D M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
K + + N I+ +LC K++++A+ ++G + V+Y L+ G + + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
+L +M +++I P+ TY+A++ ++GK +A ++ E+++ + PD T++++I+G
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
C ++++A Q + MV K D+V+ N L++G C+ +E +K FR +G ++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
VTYNTLI + ++ A S+M+ + PD +TY + L ++G LE+A
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL----- 420
Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
V+ + K E+D ++Y+ I C G+ ++A +F KG+
Sbjct: 421 ----------VIFEDMQK--REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 516 NKSTYMNLMNGL 527
+ TY +M+GL
Sbjct: 469 DIVTYTTMMSGL 480
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 180/389 (46%), Gaps = 18/389 (4%)
Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
++ K++ A + +M ++ P V +N L+ A K + + M G++ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
T N +++ CC ++ A +L K GY D V+ G+L+ G+ R + + A+ L D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
E P YNA+I L ++ + A D E+ + G+ P+ T+ +++G C+ +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
A + + M++K P+++T + LL + G + +A + F + D VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
I+ LC R+++A + M K D +Y + ++ R+E+ K M + G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 462 INHQVV---------QPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQ 503
+++ V Q +E I P +Y+ + C G + AL
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
IFE+ +++ + ++ TY ++ G+ K K
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 234/435 (53%), Gaps = 1/435 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +P + +N +L + N+ ++ K + +V + ++ IL+ G C+ G ++++
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKS 182
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
++ +T+ P+V Y LI+G C G +E+A L EM L L+ + TY LIN
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F++G + F++ +++ E G+ PN T+N ++ CK+G+ A ++ M E G S +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYNTLI C+ + EA +++D M G+ N IT NT++ C KL +A L
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
RG V+Y L++G+ R + A K+ EM+ER I PS TY +I ++S
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
E+AI + + + G++PD T++ +IHGFC +GQ+ +A + MVEK+ +P+ V N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
++ G C+EG +ALK + K A + +Y +I LCKER+ ++A L+ +M +
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 425 KLGPDRYTYAAIHTA 439
+ P + I A
Sbjct: 543 GIDPSTSILSLISRA 557
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 238/462 (51%), Gaps = 11/462 (2%)
Query: 13 YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
Y I+++ + LN ++M G VP +N L++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW---SFFN 153
Query: 73 QNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
+NKS + DV+++ +LI G C AG +E++F L E+ P+VV Y TLI+ + G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
+A L E+ + G+ N T+ ++I K G + ++ M+E+G P+ TYN
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
+++ CK G ++AF++ D M +G+ N +T NT++ LC E KL+EA +++ G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
+ ++Y TLI G+ K +AL L ++K R + PS TYN ++ G + G T A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
M+ E+ + G+ P + T+ +I F +EKA+Q M E PD+ T ++L+ G
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
C +G + +A + F+S + K + V YNT+I CKE A LL EMEEK+L P+
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
+Y + L + + +EA++ M+++G + P+TS
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSG------IDPSTS 549
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 192/355 (54%)
Query: 4 FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
FG P+ V Y T++D KKG++ + +DL +M K GLV N TY +L++G K G K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 64 AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
+ + M ++ P+++TYN ++N C G ++AF++ EM + ++VTYNTLI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
+ EA K++D++ GI PN +T+N +I +C GK+ KA + R+++ G SP
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
VTYN L+ C+ G+ A +M+ M +G+K + +T ++ T +++A L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
S + G D +Y LI G+ + N A +L+ M E+ P+ YN MI G +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
G + +A+ +L E+ + + P+ ++ +I C E + ++A + KM++ P
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 188/331 (56%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G + + TY +++ LFK G + ++ M++ G+ PN TYN +++ CK G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
K+A +V D M + ++ TYN LI G C L EA ++ +M+S + P+++TYNT
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F G+ +A L +L G+ P+ VT+NI++ +C++G A K+V+ MEE G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P VTY LID ++ NME+A ++ M GL + T + ++H C + +++EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L S ++ +EV Y T+I GY ++ + RALKL EM+E+++ P+ +Y MI L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+ K+++A ++ +++ SG+ P + + I
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 219/451 (48%), Gaps = 18/451 (3%)
Query: 83 YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
Y ++IN + + L + EM +P +N L+ S + + +E +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
+ + + + I+IK C+ G+I+K+ ++ + E GFSP+ V Y TLID CK G +E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
+A + MG+ GL N T +++ L + + + + G + + +Y ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
+D + A +++DEM+ER + + TYN +I GL + K +A +++++ G+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
P+ T+NT+I GFC G++ KAL + + P +VT NIL+SG CR+G A K
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
+ +G VTY LI + + +E A L MEE L PD +TY+ +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
G++ EA + MVE + +P+ + Y+ I +C +G AL
Sbjct: 456 KGQMNEASRLFKSMVE-----------------KNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
++ +E +K +A N ++Y ++ L K RKS
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 20/249 (8%)
Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
Y +I QS +I NE++ +G +P FN ++ + F N+
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
K D+ + IL+ G C G +EK+ G + + V Y TLI CK+ +E
Sbjct: 157 SKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
A L EM + L + TY + L ++G ++ + M E G
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG------------ 263
Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
+ P+ +Y+ +N+ C GR KDA Q+F+E R++G++ N TY L+ GL + K
Sbjct: 264 -----VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 533 --SISKAVD 539
+K VD
Sbjct: 319 LNEANKVVD 327
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 267/568 (47%), Gaps = 47/568 (8%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P YN +L++ K+ ++ V L DM G+ P T+N+L+ C + A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
D M + P+ +T+ +L+ G+C AG+ ++ L MES +LP+ V YNT+++ F
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF----SP 183
GR+ ++ K+++++ E G+ P+ VT N I CKEGK+ A +I +ME + + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
+ +TYN ++ CK G +E+A + + + + + N L L K EA +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
+ +G SY L+ G + + A + MK + P TY ++ G
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
GK + A +L E++++ +P+ T N ++H G++ +A + KM EK + D VTC
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
NI++ GLC G L+KA++ + + G A D +TY+T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
L++ LCK R +A L +EM +KL PD Y + G++ A
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 450 -----QKFTSIMVETGKINHQVVQPN---TSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
+ + S+++ G I +Q+ + + + I P+ +Y+ I C + +DA
Sbjct: 590 CHKSLETYNSLILGLG-IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648
Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ +E QK IA N ++ L+ K
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 241/492 (48%), Gaps = 40/492 (8%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
+YN L L + GK E +L M +G+ P+ +YNIL+ G CKLG L +A +V LM
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+N PD TY L++G+C+ G ++ A L +EM LP+ T N L++ ++ GR
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-------------- 177
EA +L+ +++E G + VT NI++ C G++DKA +IV+ M
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 178 ---------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
EN PD +TY+TL++ CKAG EA + M + L+ +++ N +H
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
C + K+ A+ +L K+G + +Y +LI G + L DEMKE+ I P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
+ TYN I L + K E A ++L+E++Q + P+ +F +I FC K F
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC------KVPDF- 680
Query: 349 NKMVEKSFKPDIVTC-------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
M ++ F+ + C +++ + L G L KA + + + +G + + Y L
Sbjct: 681 -DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
+ SLCK+ LE A G+L +M ++ G D + L + G +EA F M+E
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Query: 462 INHQV--VQPNT 471
+ V PN
Sbjct: 800 VGEVANKVDPNA 811
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 264/557 (47%), Gaps = 45/557 (8%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME FG LP+ V YNTI+ + ++G+ ++ ++ M+++GLVP+ T+N +S CK G
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 61 LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
+ +A R+ M ++ L P+ TYN+++ G+C G+LE+A L + + L +
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
+YN + G+ +EA ++ ++ + GI P+ ++NI++ CK G + A IV M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
+ NG PD VTY L+ C G ++ A ++ M R N T N +LH+L ++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW------------------ 278
EA LL +++GY LD V+ ++ G + ++A+++
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 279 -----DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
D + E +P TY+ ++ GL ++G+ +A ++ E++ + PD +N IH
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
FC +G++ A + M +K + T N L+ GL + + + KG +
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
+ TYNT I LC+ ++EDA LL EM +K + P+ +++ + A + + AQ+
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
V + YS NE + G+ A ++ E +G
Sbjct: 688 ETAVSICGQKEGL------------------YSLMFNELLAAGQLLKATELLEAVLDRGF 729
Query: 514 AINKSTYMNLMNGLIKR 530
+ Y +L+ L K+
Sbjct: 730 ELGTFLYKDLVESLCKK 746
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 216/470 (45%), Gaps = 11/470 (2%)
Query: 78 PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
P V+ YN+L+ +E L K+M + P T+N LI +S A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
DE+ E G KPN T I+++ YCK G DK +++ ME G P+ V YNT++ + C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY----L 253
G +++ +M++ M +GL + +T N+ + LC E K+ +A + + Y
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
+ ++Y ++ G+ + A L++ ++E + S +YN + GL + GK +A +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
++ G+ P ++N ++ G C G + A M PD VT LL G C
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
G ++ A + + ++ T N L+ SL K R+ +A LL +M EK G D T
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKI------NHQVVQPNTSKTPEEIDPSSISYSE 487
I L SG L++A + M G N + + S P I+YS
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
+N C GR+ +A +F E + + + Y ++ K+ K IS A
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK-ISSA 578
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 193/401 (48%), Gaps = 24/401 (5%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD VTY +L GK++ + LL +M + +PN T NIL+ K+G + EA
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
++ M + D T N++++G C +G L++A + K M
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 107 --ESL---KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
+SL LPD++TY+TL+N ++GR EA L E+ ++P++V +NI I +C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
K+GKI A +++++ME+ G TYN+LI + E +MD M KG+ N
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
T NT + LC +K+++A LL+ ++ + S+ LI + + + A +++ E
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ET 689
Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
Y+ M L +G+ +A ++L +L G + ++ C + ++
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
E A +KM+++ + D ++ GL + G ++A F
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 39/353 (11%)
Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
KP+ +N++++ KE +++ + ++M G +P T+N LI A C + ++ A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
+ D M KG K N T ++ C D+ LLN+ G ++V Y T+++ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI---- 322
R+ + + + K+ ++M+E ++P T+N+ I L + GK A + +++ +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 323 PDETTFNTIIHGFCSEGQVEKA---------------LQFHN------------------ 349
P+ T+N ++ GFC G +E A LQ +N
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 350 --KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
+M +K P I + NIL+ GLC+ G+L A G D+VTY L+ C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
+++ A LL EM P+ YT + +L + GR+ EA++ M E G
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 62/379 (16%)
Query: 156 MIKWYCKEGKIDKAC---KIVRN-MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
++ + K IDKA ++VR+ EN P YN L+++ K +E + M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
G+ T T N ++ LC +D A
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAAR------------------------------- 167
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+L+DEM E+ P+ FT+ ++ G ++G T++ +++LN + G++P++ +NTI
Sbjct: 168 ----ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW----I 387
+ FC EG+ + + + KM E+ PDIVT N +S LC+EG + A + F
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
L +S+TYN ++ CK LEDA L + E +Y LV G+
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
EA+ M + G I PS SY+ ++ C G DA I
Sbjct: 344 EAETVLKQMTDKG-----------------IGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 508 TRQKGIAINKSTYMNLMNG 526
++ G+ + TY L++G
Sbjct: 387 MKRNGVCPDAVTYGCLLHG 405
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
T T+ IL +++ E + L+ S+S + L S ++++ + + ++A +
Sbjct: 42 TPTIARILVRAKMHEEIQELHNLILSSSIQKTKLS--SLLSVVSIFAKSNHIDKAFPQFQ 99
Query: 280 EMKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
++ R + PS + YN ++ + + E + +++ G+ P TFN +I C
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
V+ A + ++M EK KP+ T IL+ G C+ G+ +K L+ + G + V
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
YNT++SS C+E R +D+ ++ +M E+ L PD T+ + +AL + G++ +A + S M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM- 278
Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
+++ + P P+SI+Y+ + C G +DA +FE R+ +
Sbjct: 279 ---ELDEYLGLPR---------PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 518 STYMNLMNGLIKRRKSI 534
+Y + GL++ K I
Sbjct: 327 QSYNIWLQGLVRHGKFI 343
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD+V YN + K+GK++ +L DM+K+G + TYN L+ G + E +
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI----- 122
+D M + P++ TYN I C +E+A L EM + P+V ++ LI
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 123 -----------------------------NRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
N +G+ ++A +L++ + + G + +
Sbjct: 677 VPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLY 736
Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
+++ CK+ +++ A I+ M + G+ D +ID K GN +EA D M
Sbjct: 737 KDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 246/513 (47%), Gaps = 17/513 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G PD + Y+T++D FK G L L S +G+ + ++ + Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L A V M P+V TY +LI G C G + EAF + ++ + P +VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F + G F L +++ + G P+ V + +++ K+G + A + M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
+ V +N+LID C+ +EA ++ +MG G+K + T T++ E +L+EA
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L K G D ++Y TLI + + K L+L+D M+ +I N +I L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ + E A N L++ M PD T+NT+I G+CS ++++A + + F P+
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT IL+ LC+ ++ A++ F KG ++VTY L+ K +E +F L E
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M+EK + P +Y+ I L + GR++EA I HQ + ++ P
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEAT----------NIFHQAID-------AKLLP 774
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
++Y+ I +C GR +A ++E + G+
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 209/425 (49%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P+ VTY ++ L + G++ E + + K+G+ P+ TY+ L+ G+CK G L+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ + M + PDV Y +L++G G++ A R +M + +VV +N+LI+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ R EA K+ + +GIKP+ T +++ EG++++A + M + G PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+ Y TLIDA CK ++ D+M R + + N ++H L ++++A N
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+ + D V+Y T+I GY + + A ++++ +K P+T T +I L ++
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+ AI M + + + G P+ T+ ++ F +E + + +M EK P IV+ +
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
I++ GLC+ G +++A F I D V Y LI CK RL +A L M
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 425 KLGPD 429
+ PD
Sbjct: 806 GVKPD 810
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 241/525 (45%), Gaps = 22/525 (4%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN--ILVSGYCKLGWLKEA 64
+P + Y +L++L +++ + D + + G+ P+ + + +L + +CK G + +A
Sbjct: 179 IPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKA 236
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ L+ + + + N ++ G + +E A RL + P+VVT+ TLIN
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F + G AF L +++ GI+P+ + ++ +I Y K G + K+ G D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
V +++ ID K+G++ A + M +G+ N +T ++ LC + ++ EA+ +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
KRG V+Y +LI G+ + L+++M + P Y ++ GLS+ G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
A+ ++L + + FN++I G+C + ++AL+ M KPD+ T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
++ EG LE+AL F G D++ Y TLI + CK + L M+
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
K+ D + L + R+E+A KF + ++E GK ++P ++
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GK----------------MEPDIVT 638
Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
Y+ I +CS R +A +IFE + N T L++ L K
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 36/238 (15%)
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMV--------------EKSFKPDIVTCNILLSGL 370
+ +F TI H G + A + ++M+ ++S D+ C L+
Sbjct: 99 DPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADV--CKFLMECC 156
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
CR G+++KAL+ F G + + +++SL R++ ++ + P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 431 YT-YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID---------- 479
+ + + AL G + +A F +++E G +V N +D
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVASRLLS 275
Query: 480 --------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
P+ +++ IN C +G A +F+ Q+GI + Y L++G K
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 270/530 (50%), Gaps = 21/530 (3%)
Query: 2 EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
EGF PD +Y+T+++ L K GKL++ +L +M ++G+ P+ T YNIL+ G+ K
Sbjct: 178 EGFK--PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 62 KEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
K AM + D + ++ S+ P+V T+N++I+G G +++ ++ + M+ + D+ TY++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ ++G +A + +ELDE + VT+N M+ +C+ GKI ++ ++ R ME
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
S + V+YN LI + G ++EA + +M KG + T +H LC +++A
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
++ G +LD +Y ++I + ++ A L EM + + ++ NA+I GL
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ + +A L E+ ++G P ++N +I G C G+ +A F +M+E +KPD+
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
T +ILL GLCR+ ++ AL+ + ++ G D + +N LI LC +L+DA +++
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
ME + + TY + + G A M + G + P
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG-----------------LQP 637
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
ISY+ + C A++ F++ R GI T+ L+ ++ R
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 245/519 (47%), Gaps = 21/519 (4%)
Query: 34 SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
S + G + Y+ ++ + + R+V+L+ + D +I +
Sbjct: 32 SATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKN 91
Query: 94 GMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
M ++A + K M E P + +YNTL+N F E+ + ++ L + G+ PN T
Sbjct: 92 SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
+N++IK CK+ + +KA + M + GF PD +Y+T+I+ KAG +++A + D M
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA-SKRGYYLDEVSYGTLITGYFRDEKA 271
+G+ + N ++ EK A L + Y + ++ +I+G + +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
+ LK+W+ MK+ + +TY+++I GL +G ++A + NEL + D T+NT+
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
+ GFC G+++++L+ +++E +IV+ NIL+ GL G +++A +R KG
Sbjct: 332 LGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
A D TY I LC + A G++ E+E D Y YA+I L + RLEEA
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 452 FTSIMVETG-KINHQVVQP------NTSKTPEE-----------IDPSSISYSEKINEHC 493
M + G ++N V S+ E P+ +SY+ I C
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
G++ +A +E + G + TY L+ GL + RK
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME C + VTYNT+++ FK G N + M K GL P+ +YN ++ G C
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
+ AM D + P V+T+N+L+ N
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 260/519 (50%), Gaps = 22/519 (4%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
P V +N +L A+ K K V L M+ G+ + TY+I ++ +C+ L A+
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
V+ M + PD+ T + L+NG+C++ + +A L +M + PD T+ TLI+ F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ EA L+D++ + G +P+ VT+ ++ CK G ID A ++ ME + V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
+NT+ID+ CK ++E A + M KG++ N +T N++++ LC + +A LL++
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
++ + V++ LI +F++ K A KL +EM +R I P T TYN +I G +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
++A M ++ +P+ T+NT+I+GFC +VE ++ +M ++ + VT +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G + G + A F+ + D +TY+ L+ LC +L+ A + +++ ++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
+ + Y + + ++G++ EA F S+ I P ++Y
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---------------------SIKPDVVTY 538
Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
+ I+ CS+ ++A +F + ++ G N TY L+
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 242/519 (46%), Gaps = 20/519 (3%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ G D TY+ ++ ++ +L+ +L+ M K G P+ T + L++GYC
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+ +A+ +VD M + PD +T+ LI+G EA L +M PD+VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
++N + G A L+++++ IK N V N +I CK ++ A + ME G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ VTYN+LI+ C G +A R++ M K + N +T N ++ E KL EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L +R D ++Y LI G+ + + A +++ M + +P+ TYN +I G
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ + E +++ E+ Q G++ + T+ TII GF G + A +MV DI
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+T +ILL GLC G L+ AL F+ ++ YNT+I +CK ++ +A+ L
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
+ K PD TY + + L L+EA M E G + P
Sbjct: 529 LSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL-----------------P 568
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
+S +Y+ I + + ++ +E R G + ST
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 246/508 (48%), Gaps = 52/508 (10%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
K+++ DL DM K P+ +N L+S K+ + + + + M D++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 85 MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
+ IN +C L A + +M L PD+VT ++L+N + S R +A L+D++ E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
G KP+ T +I K +A +V M + G PD VTY T+++ CK G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
+++ M +K N + NTI+ +LC + ++ A
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA------------------------- 277
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
+ L+ EM+ + I P+ TYN++I L G+ A +L+ +L+ + P+
Sbjct: 278 ----------VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
TFN +I F EG++ +A + H +M+++S PD +T N+L++G C L++A + F+
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
+ K + TYNTLI+ CK +R+ED L EM ++ L + TY I ++G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
+ AQ MV +++ P +I ++YS ++ CS G+ AL I
Sbjct: 448 DCDSAQMVFKQMV-------------SNRVPTDI----MTYSILLHGLCSYGKLDTALVI 490
Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
F+ ++ + +N Y ++ G+ K K
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 196/409 (47%), Gaps = 17/409 (4%)
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L NR + + +A L ++ + P+ V N ++ K K + + M+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
S D TY+ I+ C+ + A ++ M + G + + +TL+++L+ C K++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L++ + GY D ++ TLI G F KA+ A+ L D+M +R P TY ++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+ G + A+++LN++ + + + FNTII C VE A+ +M K +P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
VT N L++ LC G A + + + K + VT+N LI + KE +L +A L E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
M ++ + PD TY + RL+EA++ MV ++ P
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-----------------KDCLP 396
Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ +Y+ IN C R +D +++F E Q+G+ N TY ++ G +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 20/284 (7%)
Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
K + A+ L+ +M + + PS +N ++ +++ K E I + ++ G+ D T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
I+ FC Q+ AL KM++ ++PDIVT + LL+G C + A+ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
G D+ T+ TLI L + +A L+ +M ++ PD TY + L + G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 450 QKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKIN 490
+ M E +I VV NT + I P+ ++Y+ IN
Sbjct: 243 LNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
C+ GR+ DA ++ +K I N T+ L++ K K +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 270/536 (50%), Gaps = 14/536 (2%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P Y + A K + + +L + MK + P+ YN+L+ G CK + +A ++
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
D M + LP + TYN LI+G+C AG E++F++R+ M++ + P ++T+NTL+ F+
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
+G +A ++ E+ + G P+A T +I+ Y K + A + ++G + T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
+ L++A CK G +E+A ++ KGL N + NT++ C + L A M + +
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
K+G D ++Y LI + + A K ++MK + + PS TYN +I G + + +
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
+ D+L E+ +G +P+ ++ T+I+ C ++ +A M ++ P + N+L+
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
G C +G +E A +F + + KG ++ VTYNTLI L +L +A LL E+ K L
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-----KINHQVVQPNTSKTPE------ 476
PD +TY ++ + +G ++ M +G K H ++ T + E
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLF 656
Query: 477 ---EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ P + Y+ ++ + G + A + ++ +K I ++K+TY +L+ G +K
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 225/450 (50%), Gaps = 37/450 (8%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
T + +L+AL K+GK+ + ++L +GLVPN YN ++ GYC+ G L A ++ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+ PD YN LI +C G +E A + +M+ + P V TYN LI + GR
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY---GRK 472
Query: 132 ME---AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
E F ++ E++++G PN V++ +I CK K+ +A + R+ME+ G SP Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
N LID C G +E+AFR M +KG+++N +T NT++ L KL EA LL S+
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK-------------------------- 282
+G D +Y +LI+GY R + L++EMK
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 283 -----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
E + P YN ++ + G E+A ++ ++++ + D+TT+N++I G
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
G++ + ++M + +P+ T NI++ G C A ++R KG +D
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCI 772
Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
N L+S L +E R ++A ++SEM + LG
Sbjct: 773 GNELVSGLKEEWRSKEAEIVISEMNGRMLG 802
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 225/464 (48%), Gaps = 39/464 (8%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY------------ 55
P +T+NT+L LFK G + + ++L +MK G VP+ T++IL GY
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 56 -----------------------CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
CK G +++A ++ +P+ YN +I+G+C
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 93 AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
G L A + ME + PD + YN LI RF E G A K ++++ G+ P+ T
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
+NI+I Y ++ + DK I++ ME+NG P+ V+Y TLI+ CK + EA + M
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
+G+ N ++ C + K+++A+ K+G L+ V+Y TLI G K +
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
A L E+ + + P FTYN++I G +G ++ I + E+ +SG+ P T++ +I
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
C++ +E + +M S KPD++ N +L G +EKA + I K
Sbjct: 642 -SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
+D TYN+LI K +L + L+ EM +++ P+ TY I
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 238/530 (44%), Gaps = 21/530 (3%)
Query: 16 ILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
+L L + K+ +E DL ++ +G+ P+ + +L+ K + + V + ++
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 75 KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
P + Y I + + L M+ ++ P V YN LI+ + R +A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
+L DE+ + P+ +T+N +I YCK G +K+ K+ M+ + P +T+NTL+
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
KAG +E+A ++ M G + T + + +K + A + +A G ++
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
+ L+ ++ K +A ++ + ++P+ YN MI G + G A +
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
+ + GM PD +N +I FC G++E A + NKM K P + T NIL+ G R+
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
+K + G + V+Y TLI+ LCK +L +A + +ME++ + P Y
Sbjct: 474 EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYN 533
Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--------TSKTPEEID------- 479
+ G++E+A +F+ M++ G I +V N T K E D
Sbjct: 534 MLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 480 ----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
P +Y+ I+ + G + + ++EE ++ GI TY L++
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 31/215 (14%)
Query: 11 VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL--------- 61
VTYNT++D L GKL+E DLL ++ ++GL P+ TYN L+SGY G +
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 62 ---------------------KEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEA 99
KE + + + + SL PD+ YN +++ + G +E+A
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
F L+K+M + D TYN+LI + G+ E LIDE++ ++P A T+NI++K
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
+C+ A R M+E GF D N L+
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD + YN +L G + + +L M ++ + ++TTYN L+ G K+G L E +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+D M + P+ TYN+++ G C A+ +EM+ L DV N L++ E
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 128 SGRSMEAFKLIDELD 142
RS EA +I E++
Sbjct: 783 EWRSKEAEIVISEMN 797
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 258/537 (48%), Gaps = 30/537 (5%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P V++N+I+ K G ++ + + K GLVP+ ++NIL++G C +G + EA+ +
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 321
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
M ++ PD TYN+L G+ GM+ A+ + ++M L PDV+TY L+ +
Sbjct: 322 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
G L+ ++ G + N++ ++M+ CK G+ID+A + M+ +G SPD V
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
Y+ +I CK G + A + D M K + N+ T +L LC + L EA LL+S
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
G LD V Y +I GY + AL+L+ + E I PS T+N++I+G ++
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
+A +L+ + G+ P ++ T++ + + G + + +M + P VT +++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
GLC RE I EK + R +G D +TYNT+I LC+ + L A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
F L M+ + L TY + +L G + +A F + E
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE---------------- 725
Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
+ + S +Y+ I HC +G + A+++F + +G ++ Y ++N L +R
Sbjct: 726 -QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 781
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 13/517 (2%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
+YN++L + K+ +V + D N TY+ +V G C+ L++A+ +
Sbjct: 203 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 255
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
P V ++N +++G+C G ++ A + L+P V ++N LIN G
Sbjct: 256 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 315
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
EA +L ++++HG++P++VT+NI+ K + G I A +++R+M + G SPD +TY L
Sbjct: 316 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 375
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
+ C+ GN++ ++ M +G ++N+I + +L LC ++DEA L N G
Sbjct: 376 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 435
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
D V+Y +I G + K + AL L+DEM +++I+P++ T+ A++ GL Q G +A
Sbjct: 436 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 495
Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
+L+ L+ SG D +N +I G+ G +E+AL+ ++E P + T N L+ G
Sbjct: 496 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 555
Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
C+ + +A K L G A V+Y TL+ + + L EM+ + + P
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 615
Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
TY+ I L + E V +I + Q E I P I+Y+ I
Sbjct: 616 VTYSVIFKGLCRGWKHENCNH-----VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 670
Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
C A E + + + + +TY L++ L
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 13/473 (2%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G PD+VTYN + G ++ +++ DM +GL P+ TY IL+ G C+LG
Sbjct: 325 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 384
Query: 61 LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
+ + ++ D++++ L + +++++G C G ++EA L +M++ L PD+V Y+
Sbjct: 385 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 444
Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
+I+ + G+ A L DE+ + I PN+ TH ++ C++G + +A ++ ++ +
Sbjct: 445 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 504
Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
G + D V YN +ID K+G +EEA + V+ G+ + T N++++ C + + EA
Sbjct: 505 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564
Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
+L+ G VSY TL+ Y +L EMK I P+ TY+ + G
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 624
Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
L + K E +L E + G+ PD+ T+NTII C + A F
Sbjct: 625 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 684
Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
M ++ T NIL+ LC G + KA F S + ++ Y TLI + C
Sbjct: 685 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 744
Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
+ E A L ++ + Y+A+ L + E++ F +M+ G
Sbjct: 745 KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 797
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 12/393 (3%)
Query: 14 NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
+ +L L K G+++E L + MK GL P+ Y+I++ G CKLG A+ + D M
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 74 NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
+ LP+ T+ L+ G C GML EA L + S D+V YN +I+ + +SG E
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
A +L + E GI P+ T N +I YCK I +A KI+ ++ G +P V+Y TL+D
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588
Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------C-----EKKLDEAYM 241
A GN + + M +G+ +T + I LC C E+ ++
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648
Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
L G D+++Y T+I R + + A + MK R + S+ TYN +I L
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708
Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
G +A + L + + + + T+I C +G E A++ ++++ + F I
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768
Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
+ +++ LCR ++ ++ FF + +G + D
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 218/487 (44%), Gaps = 60/487 (12%)
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
++ML+ M++++ + K+M+ L +YN+++ F E+ + + +K I +
Sbjct: 168 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK 227
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
+EH T++ ++ C++ K++ A +R E P V++N+++ CK G +
Sbjct: 228 NEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 280
Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
+ A + + GL + + N +++ LC + EA L + +K G D V+Y L
Sbjct: 281 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 340
Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTY---------------------------- 293
G+ + A ++ +M ++ + P TY
Sbjct: 341 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 400
Query: 294 --------NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
+ M+ GL ++G+ ++A+ + N++ G+ PD ++ +IHG C G+ + AL
Sbjct: 401 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 460
Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
+++M +K P+ T LL GLC++G+L +A S I G+ +D V YN +I
Sbjct: 461 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 520
Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
K +E+A L + E + P T+ ++ ++ + EA+K ++ G
Sbjct: 521 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG----- 575
Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
+ PS +SY+ ++ + + G K ++ E + +GI TY +
Sbjct: 576 ------------LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623
Query: 526 GLIKRRK 532
GL + K
Sbjct: 624 GLCRGWK 630
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 49/106 (46%)
Query: 10 NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
+ TYN ++D+L G + + + +++Q + ++ Y L+ +C G + A+++
Sbjct: 697 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 756
Query: 70 LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
+ + Y+ +IN C ++ E+ M S + PD+
Sbjct: 757 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 262/525 (49%), Gaps = 18/525 (3%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +P + YN IL L K GK++E + +MKK PN +TYNIL+ C+ G L A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTA 396
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ D M + P+V T N++++ C + L+EA + +EM+ PD +T+ +LI+
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ GR +A+K+ +++ + + N++ + +IK + G+ + KI ++M SPD
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
NT +D KAG E+ M + + + + + + ++H L +E Y L
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S ++G LD +Y +I G+ + K N+A +L +EMK + P+ TY ++I GL++
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+ ++A + E + + ++++I GF G++++A ++++K P++ T N
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
LL L + + +AL F+S + VTY LI+ LCK R+ AF EM+++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
+ P +Y + + L ++G + EA G + P S
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-----------------PDSAC 799
Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
Y+ I + R DA +FEETR++G+ I+ T + L++ L K
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 233/492 (47%), Gaps = 35/492 (7%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
P+ TYN ++D L + GKL+ +L M+K GL PN T NI+V CK L EA +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+ M PD T+ LI+G G +++A+++ ++M + + Y +LI FF
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 128 SGRSMEAFK-----------------------------------LIDELDEHGIKPNAVT 152
GR + K + +E+ P+A +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
++I+I K G ++ ++ +M+E G D YN +ID CK G + +A+++++ M
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
KG + +T +++ L +LDEAYML A + L+ V Y +LI G+ + + +
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
A + +E+ ++ + P+ +T+N+++ L ++ + +A+ + + P++ T+ +I
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
+G C + KA F +M ++ KP ++ ++SGL + G + +A F + G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
DS YN +I L R DAF L E + L T + L ++ LE+A
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Query: 453 TSIMVETGKINH 464
+++ ETGK H
Sbjct: 855 GAVLRETGKARH 866
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 257/564 (45%), Gaps = 53/564 (9%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M F P Y T++ A + + L M++ G P + L+ G+ K G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-- 118
+ A+ ++D M + D+ YN+ I+ + G ++ A++ E+E+ L PD VTY
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 119 ---------------------------------NTLINRFFESGRSMEAFKLIDELDEHG 145
NT+I + +G+ EA+ L++ G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
P+ + +N ++ K GK+D+A K+ M+++ +P+ TYN LID C+AG ++ AF
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAF 397
Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
+ D M + GL N T+N ++ LC +KLDEA + + DE+++ +LI G
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
+ + + A K++++M + ++ Y ++I G+ E + +++ PD
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
NT + G+ EK ++ + F PD + +IL+ GL + G + + F S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
+G +D+ YN +I CK ++ A+ LL EM+ K P TY ++ L + R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
L+EA ++ E K + I+ + + YS I+ GR +A I
Sbjct: 638 LDEAY----MLFEEAK-------------SKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
EE QKG+ N T+ +L++ L+K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVK 704
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 245/536 (45%), Gaps = 19/536 (3%)
Query: 12 TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
+YN++L + + + + +L +M G P+ T +V G K L+E VV +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 72 TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
+ K P Y LI + + L ++M+ L P V + TLI F + GR
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
A L+DE+ + + V +N+ I + K GK+D A K +E NG PD VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
I CKA ++EA M + + + T NT++ K DEAY LL +G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
++Y ++T + K + ALK+++EMK + P+ TYN +I L ++GK + A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
+ + + ++G+ P+ T N ++ C ++++A +M K PD +T L+ GL
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-- 429
+ G ++ A K + + +S+ Y +LI + R ED + +M + PD
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 430 ---RYTYAAIHTALVESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS- 481
Y E GR EE A++F + H +++ + E+ S
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 482 --------SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ +Y+ I+ C G+ A Q+ EE + KG TY ++++GL K
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 234/457 (51%), Gaps = 3/457 (0%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP + + +L+ + K K + V +L ++ G+ + T N+L++ +C+ A
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
+ M + PD+ T+ LING+C +EEA + +M + + PDVV Y T+I+
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++G A L D+++ +GI+P+ V + ++ C G+ A ++R M + PD +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
T+N LIDA K G +A + + M R + N T ++++ C E +DEA +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+G + D V+Y +LI G+ + +K + A+K++ EM ++ + +T TY +I G Q GK
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK---SFKPDIVTC 363
A ++ + ++ G+ P+ T+N ++H C G+V+KAL M ++ P+I T
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
N+LL GLC G LEKAL F + + +TY +I +CK ++++A L +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
K + P+ TY + + L G EA M E G
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 222/422 (52%), Gaps = 3/422 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G D T N +++ + + L M K G P+ T+ L++G+C ++EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
M +V+ M + PDV Y +I+ C G + A L +ME+ + PDVV Y +L+N
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
SGR +A L+ + + IKP+ +T N +I + KEGK A ++ M +P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
TY +LI+ C G ++EA +M +M KG + + ++++ C KK+D+A +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
S++G + ++Y TLI G+ + K N A +++ M R + P+ TYN ++ L +G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 305 KTEQAIDMLNELLQ---SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
K ++A+ + ++ + G+ P+ T+N ++HG C G++EKAL M ++ I+
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
T I++ G+C+ G ++ A+ F S KG + VTY T+IS L +E +A L +M
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 422 EE 423
+E
Sbjct: 522 KE 523
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 227/472 (48%), Gaps = 20/472 (4%)
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
EA+ + M +++ LP + + L+N + L ++ + + D+ T N
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
L+N F +S + A + ++ + G +P+ VT +I +C ++++A +V M E G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD V Y T+ID+ CK G++ A + D M G++ + + ++++ LC + +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
LL +KR D +++ LI + ++ K A +L++EM I P+ FTY ++I G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
G ++A M + G PD + ++I+GFC +V+ A++ +M +K +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+T L+ G + G A + F + +G + TYN L+ LC +++ A + +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 421 MEEKKL---GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
M+++++ P+ +TY + L +G+LE+A M + E
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-----------------RE 455
Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+D I+Y+ I C G+ K+A+ +F KG+ N TY +++GL +
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 170/324 (52%), Gaps = 3/324 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME +G PD V Y ++++ L G+ + LL M K+ + P+ T+N L+ + K G
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+A + + M + P+++TY LING+C G ++EA ++ ME+ PDVV Y +
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F + + +A K+ E+ + G+ N +T+ +I+ + + GK + A ++ +M G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK---GLKMNTITLNTILHTLCCEKKLD 237
P+ TYN L+ C G +++A + + M ++ G+ N T N +LH LC KL+
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
+A M+ KR + ++Y +I G + K A+ L+ + + + P+ TY MI
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 298 WGLSQSGKTEQAIDMLNELLQSGM 321
GL + G +A + ++ + G+
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGV 526
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G + +TY T++ + GK N +++ S M +G+ PN TYN+L+ C G +K+A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 65 MRVVDLMTQ---NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
+ + + M + + P++WTYN+L++G C G LE+A + ++M ++ ++TY +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
I ++G+ A L L G+KPN VT+ MI +EG +A + R M+E+G
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Query: 182 S 182
S
Sbjct: 527 S 527
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 222/423 (52%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LP ++ +L A+ K K + V L M+ G+ N T NIL++ +C+ L A+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
+ M + P + T+ L+NG+C + +A + +M + P+VV YNT+I+
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+S + A L++ +++ GI P+ VT+N +I C G+ A ++V M + PD
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
T+N LIDA K G + EA + M R+ L + +T + +++ LC +LDEA +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+G + D V+Y LI GY + +K +KL+ EM +R ++ +T TY +I G ++GK
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
A ++ ++ G+ P+ T+N ++HG C G++EKAL M + DIVT NI+
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ G+C+ G + A + S +G D TY T++ L K+ +A L +M+E +
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 427 GPD 429
P+
Sbjct: 498 LPN 500
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 214/439 (48%), Gaps = 6/439 (1%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
KL++ DL M + +P+ ++ L+S K+ K+ V+ L Q + L ++
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNLC 117
Query: 82 TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
T N+L+N +C L A +M L P +VT+ +L+N F R +A + D++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
G KPN V +N +I CK ++D A ++ ME++G PD VTYN+LI C +G
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
+A RM+ M ++ + + T N ++ E ++ EA +R D V+Y L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
I G + + A +++ M + P TY+ +I G +S K E + + E+ Q G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
+ + T+ +I G+C G++ A + +MV P+I+T N+LL GLC G +EKAL
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
G D VTYN +I +CK + DA+ + + + L PD +TY + L
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 442 ESGRLEEAQKFTSIMVETG 460
+ G EA M E G
Sbjct: 478 KKGLRREADALFRKMKEDG 496
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 175/328 (53%), Gaps = 6/328 (1%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G G P+ V YNTI+D L K +++ DLL+ M+K G+ P+ TYN L+SG C G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+A R+V MT+ + PDV+T+N LI+ G + EA +EM L PD+VTY+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI R EA ++ + G P+ VT++I+I YCK K++ K+ M + G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 FSPDCVTYNTLIDANCKAGNM---EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
+ VTY LI C+AG + EE FR M G+ N IT N +LH LC K++
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC---GVHPNIITYNVLLHGLCDNGKIE 413
Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
+A ++L K G D V+Y +I G + + A ++ + + +MP +TY M+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDE 325
GL + G +A + ++ + G++P+E
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 17/435 (3%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
L+++ L M + LP + ++ L++ + + L +++ GI N T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
++ +C+ ++ A + M + G P VT+ +L++ C+ + +A M D M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
K N + NTI+ LC K++D A LLN K G D V+Y +LI+G + + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
++ M +R+I P FT+NA+I + G+ +A + E+++ + PD T++ +I+G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
C ++++A + MV K PD+VT +IL++G C+ +E +K F +G ++
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
VTY LI C+ +L A + M + P+ TY + L ++G++E+A +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
M + G +D ++Y+ I C G DA I+ +G+
Sbjct: 422 MQKNG-----------------MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 516 NKSTYMNLMNGLIKR 530
+ TY +M GL K+
Sbjct: 465 DIWTYTTMMLGLYKK 479
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 185/400 (46%), Gaps = 52/400 (13%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K+D + + +M + P ++ L+ A K + + + M G+ N T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
+L+ C +L A L K G+ V++G+L+ G+ R ++ AL ++D+M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS------- 337
P+ YN +I GL +S + + A+D+LN + + G+ PD T+N++I G CS
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 338 ----------------------------EGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
EG+V +A +F+ +M+ +S PDIVT ++L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
LC L++A + F + KG D VTY+ LI+ CK +++E L EM ++ + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
TY + +G+L A++ MV G + P+ I+Y+ +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-----------------VHPNIITYNVLL 403
Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
+ C G+ + AL I + ++ G+ + TY ++ G+ K
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 18/293 (6%)
Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
+ L++ + +K + + LW++M+ I + T N ++ + + A+ L +++
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
+ G P TF ++++GFC +V AL ++MV +KP++V N ++ GLC+ ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
AL G D VTYN+LIS LC R DA ++S M ++++ PD +T+ A+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 438 TALVESGRLEEAQKFTSIM---------VETGKINHQVVQPNTSKTPEEID--------- 479
A V+ GR+ EA++F M V + + + + EE+
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
P ++YS IN +C + + +++F E Q+G+ N TY L+ G + K
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 19/304 (6%)
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
S+R Y + Y ++ R K + +L L+ M + + +PS ++ ++ +S+ K
Sbjct: 39 SRRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
+ I + ++ G+ + T N +++ FC Q+ AL F KM++ +P IVT L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
L+G CR + AL F + G + V YNT+I LCK +++++A LL+ ME+ +
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPE 476
GPD TY ++ + L SGR +A + S M + I+ V + S+ E
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 477 --------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
+DP ++YS I C R +A ++F KG + TY L+NG
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 529 KRRK 532
K +K
Sbjct: 338 KSKK 341
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 258/555 (46%), Gaps = 55/555 (9%)
Query: 13 YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
Y+ + + K+G + + + L M GL+P Y L+ GYC+ +++ ++ M
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 73 QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
+ + +TY ++ G C++G L+ A+ + KEM + P+VV Y TLI F ++ R
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
+A +++ E+ E GI P+ +N +I K ++D+A + M ENG P+ TY I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
+A A + + M G+ N + +++ C + K+ EA S +G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
D +Y L+ G F+++K + A +++ EM+ + I P F+Y +I G S+ G ++A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
+E+++ G+ P+ +N ++ GFC G++EKA + ++M K P+ VT ++ G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL-------------- 418
G L +A + F LKG DS Y TL+ C+ +E A +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 419 ------------SEMEEKKLG------------PDRYTYAAIHTALVESGRLEEAQKFTS 454
+E++ + L P+ TY + L + G LE A+
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK---- 825
Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
++ HQ+ N + P+ I+Y+ +N + GR + +F+E GI
Sbjct: 826 ------ELFHQMQNAN-------LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 515 INKSTYMNLMNGLIK 529
+ Y ++N +K
Sbjct: 873 PDHIMYSVIINAFLK 887
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 277/564 (49%), Gaps = 41/564 (7%)
Query: 3 GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
G +P +LDAL + +L+ D+ M ++ +V + TY++L+ +C+ G ++
Sbjct: 179 GLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238
Query: 63 ---------------------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
A+++ + M +P +TY++LI+G C LE+A
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298
Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWY 160
L EM+SL + D TY+ LI+ + GR+ +A K L+ E+ HGI ++ I
Sbjct: 299 LLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357
Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
KEG ++KA + M +G P Y +LI+ C+ N+ + + ++ M ++ + ++
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
T T++ +C LD AY ++ G + V Y TLI + ++ + A+++ E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
MKE+ I P F YN++I GLS++ + ++A L E++++G+ P+ T+ I G+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
A ++ +M E P+ V C L++ C++G + +A +RS + +G D+ TY
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
L++ L K +++DA + EM K + PD ++Y + + G +++A MVE G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 461 KINHQVV----------QPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDAL 502
+ ++ K E +D P++++Y I+ +C G +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 503 QIFEETRQKGIAINKSTYMNLMNG 526
++F+E + KG+ + Y L++G
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 16/494 (3%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD YN+++ L K +++E R L +M + GL PN TY +SGY + A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ V M + LP+ LIN +C G + EA + M +L D TY L+N
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
F++ + +A ++ E+ GI P+ ++ ++I + K G + KA I M E G +P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
+ YN L+ C++G +E+A ++D M KGL N +T TI+ C L EA+ L +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
+G D Y TL+ G R RA+ ++ K + ST +NA+I + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFG 780
Query: 305 KTEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
KTE ++LN L+ P++ T+N +I C EG +E A + ++M + P +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
+T LL+G + G + F I G D + Y+ +I++ KE A L+ +
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 421 MEEKKLGPDR-----YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
M K D T A+ + + G +E A+K MV I P+++
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI------PDSATVI 954
Query: 476 EEIDPSSISYSEKI 489
E I+ S IS ++++
Sbjct: 955 ELINESCISSNQRV 968
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 74/282 (26%)
Query: 320 GMIPDETTFNTIIHGFCSEGQVEKAL---------------------------------- 345
G D F + G+ ++G +E+A+
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 346 -QFHNKMVEKSFKPDIVTCNILLSGLCREGILE---------------------KALKFF 383
+ MVE++ D+ T ++L+ CR G ++ ALK
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
S I KG TY+ LI LCK +RLEDA LL EM+ + D +TY+ + L++
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 444 GRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISY 485
+ A+ MV G + + + P + +Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
+ I +C + + ++ E +++ I I+ TY ++ G+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 27/232 (11%)
Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALK 381
+F+ + C+ G EKAL +M+E+++ IV C+ G +G+L L
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGIL- 157
Query: 382 FFRSWILKGKAVDSVTY----------------NTLISSLCKERRLEDAFGLLSEMEEKK 425
F +I KG ++V L+ +L + RL+ + + M E+
Sbjct: 158 -FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216
Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKF---TSIMVETGKIN-HQVVQPNTSKTPEEIDPS 481
+ D TY + A +G ++ + T T +N ++ S + + P
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276
Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
+Y I+ C R +DA + E G++++ TY L++GL+K R +
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 239/455 (52%), Gaps = 5/455 (1%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G +P +T+NT+LD+ FK G L V + +MK++ + + TYNIL++G+ K G ++EA
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
R M ++ +++N LI G+C G+ ++A+ + EM + + P TYN I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
+ GR +A +L+ + P+ V++N ++ Y K GK +A + ++ P
Sbjct: 353 LCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
VTYNTLID C++GN+E A R+ + M + + + IT T++ L A + +
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQS 303
++G D +Y T G R +++A +L +EM P YN I GL +
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
G +AI+ ++ + G++PD T+ T+I G+ GQ + A +++M+ K P ++T
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
+L+ G + G LE+A ++ +G + +T+N L+ +CK +++A+ L +MEE
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
+ + P++Y+Y + + + + EE K M++
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 223/434 (51%), Gaps = 11/434 (2%)
Query: 11 VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
VTYN +++ K GK+ E R DM++ G ++N L+ GYCK G +A V D
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 71 MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
M P TYN+ I C+ G +++A L M + PDVV+YNTL++ + + G+
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
+EA L D+L I P+ VT+N +I C+ G ++ A ++ M PD +TY T
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL---DEAYMLLNSAS 247
L+ K GN+ A + D M RKG+K + T E +L D+A+ L
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT---RAVGELRLGDSDKAFRLHEEMV 506
Query: 248 KRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
++ +++ Y I G + +A++ ++ ++P TY +I G ++G+
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
+ A ++ +E+L+ + P T+ +I+G G++E+A Q+ +M ++ +P+++T N L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
L G+C+ G +++A ++ +G + +Y LIS C + E+ L EM +K++
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 427 GPDRYTYAAIHTAL 440
PD YT+ A+ L
Sbjct: 687 EPDGYTHRALFKHL 700
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 254/531 (47%), Gaps = 24/531 (4%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G LP N +L L +N+ + M + G++P T+N ++ K G L+
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 65 MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
++ +++ +N +V TYN+LING+ G +EEA R +M ++N LI
Sbjct: 258 DKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
+ + G +A+ + DE+ GI P T+NI I C G+ID A +++ +M +P
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----AP 372
Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
D V+YNTL+ K G EA + D + + + +T NT++ LC L+ A L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
+ + + D ++Y TL+ G+ ++ + A +++DEM + I P + Y G +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 304 GKTEQAIDMLNELLQSGM-IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
G +++A + E++ + PD T +N I G C G + KA++F K+ PD VT
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
++ G G + A + + K +TY LI K RLE AF +EM+
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
++ + P+ T+ A+ + ++G ++EA ++ M E G I P+
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-----------------IPPNK 655
Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
SY+ I+++C ++++ +++++E K I + T+ L L K +S
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 176/388 (45%), Gaps = 80/388 (20%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P TYN + AL G++++ R+LLS M P+ +YN L+ GY K+G EA
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEA 393
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ D + P + TYN LI+G C +G LE A RL++EM + + PDV+TY TL+
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 125 FFESGR-----------------------------------SMEAFKLIDEL---DEHGI 146
F ++G S +AF+L +E+ D H
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA- 512
Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT---------------- 190
P+ +N+ I CK G + KA + R + G PD VTY T
Sbjct: 513 -PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 191 -------------------LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
LI + KAG +E+AF+ M ++G++ N +T N +L+ +C
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
+DEAY L + G ++ SY LI+ EK +KL+ EM +++I P +
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQS 319
T+ A+ L + ++ + ++ L LL S
Sbjct: 692 THRALFKHLEKDHESRE-VEFLERLLLS 718
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+ G P+ +T+N +L + K G ++E L M+++G+ PN+ +Y +L+S C
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLI 87
+E +++ M + PD +T+ L
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALF 697
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 265/526 (50%), Gaps = 44/526 (8%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
LPD T N + L L+ + +G P+R+++N +VS CKLG +K A
Sbjct: 18 LPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAED 77
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL------PDVVTYNT 120
+V M + PDV +YN LI+G C G + A + +ESL+ PD+V++N+
Sbjct: 78 IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV---LESLRASHGFICKPDIVSFNS 134
Query: 121 LINRFFESGRSMEAFKLIDELDEH-GI-----KPNAVTHNIMIKWYCKEGKIDKACKIVR 174
L N F K++DE+ + G+ PN VT++ I +CK G++ A K
Sbjct: 135 LFNGF-------SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
+M+ + SP+ VT+ LID CKAG++E A + M R + +N +T ++ C +
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
++ A + + + + + Y T+I G+F+ ++ A+K +M + + Y
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
+I GL +GK ++A +++ ++ +S ++PD F T+++ + G+++ A+ ++K++E+
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
F+PD+V + ++ G+ + G L +A+ +F I K + V Y LI +LCKE +
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFIEV 422
Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
L S++ E L PD++ Y + L + G L +A K + MV+ G +
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL------------ 470
Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
++Y+ I S+G +A Q+F+E GI+ + + +
Sbjct: 471 -----LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 222/492 (45%), Gaps = 36/492 (7%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P ++N+++ + K G++ D++ M + G P+ +YN L+ G+C+ G ++ A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 65 MRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNT 120
V++ + + PD+ ++N L NG+ ML+E F M LK P+VVTY+T
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCCSPNVVTYST 168
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
I+ F +SG A K + + PN VT +I YCK G ++ A + + M
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
S + VTY LID CK G M+ A M M ++ N++ TI+ D A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L +G LD +YG +I+G + K A ++ ++M++ ++P + M+
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL--------------- 345
+SG+ + A++M ++L++ G PD +T+I G GQ+ +A+
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408
Query: 346 ---------------QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
+ +K+ E PD ++GLC++G L A K + +G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
+D + Y TLI L + + +A + EM + PD + + A + G + A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 451 KFTSIMVETGKI 462
M G +
Sbjct: 529 DLLLDMQRRGLV 540
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 226/459 (49%), Gaps = 34/459 (7%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLV--PNRTTYNILVSGYCK 57
M FGC PD ++YN+++D + G + +L ++ G + P+ ++N L +G+ K
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 58 LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
+ L E + +M + S P+V TY+ I+ +C +G L+ A + M+ L P+VVT
Sbjct: 142 MKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
+ LI+ + ++G A L E+ + N VT+ +I +CK+G++ +A ++ M
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
E+ P+ + Y T+ID + G+ + A + + M +G++++ I+ LC KL
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
EA ++ K D V + T++ YF+ + A+ ++ ++ ER P + MI
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 298 WGLSQSGKTEQAI------------------------------DMLNELLQSGMIPDETT 327
G++++G+ +AI + +++ ++G++PD+
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
+ + I G C +G + A + +MV++ D++ L+ GL +G++ +A + F +
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
G + DS ++ LI + KE + A LL +M+ + L
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 218/458 (47%), Gaps = 29/458 (6%)
Query: 95 MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
M+ EA + + LPD T N I++ S + + K + L G P+ + N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM-GR 213
++ + CK G++ A IV +M G PD ++YN+LID +C+ G++ A +++ +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 214 KGL--KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
G K + ++ N++ + K LDE ++ + K + V+Y T I + + +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGEL 179
Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
ALK + MK + P+ T+ +I G ++G E A+ + E+ + M + T+ +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
I GFC +G++++A + +++MVE +P+ + ++ G + G + A+KF + +G
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
+D Y +IS LC +L++A ++ +ME+ L PD + + A +SGR++ A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEID-------------------PSSISYSEKINEH 492
++E G +P+ ID + + Y+ I+
Sbjct: 360 MYHKLIERG------FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413
Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
C +G + + ++F + + G+ +K Y + + GL K+
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
PD V +T++D + K G+L+E K N Y +L+ CK G E R+
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEK-----ANDVMYTVLIDALCKEGDFIEVERL 425
Query: 68 VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
+++ +PD + Y I G C G L +AF+L+ M LL D++ Y TLI
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485
Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
G +EA ++ DE+ GI P++ +++I+ Y KEG + A ++ +M+ G
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL------ 539
Query: 188 YNTLIDANC--KAGN 200
+ DA+C + GN
Sbjct: 540 VTAVSDADCSKQCGN 554
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 221 bits (564), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 220/427 (51%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
+P V + +L + K K + V L M+ G+ + ++ IL+ +C+ L A+
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
++ M + P + T L+NG+C +EA L M+ +P+VV YNT+IN
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
++ A ++ +++ GI+ +AVT+N +I G+ A +++R+M + P+ +
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
+ LID K GN+ EA + M R+ + N T N++++ C L +A + +
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
+G + D V+Y TLITG+ + ++ +KL+ EM + ++ FTYN +I G Q+GK
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
A + N ++ G+ PD T+N ++ C+ G++EKAL + + DI+T NI+
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
+ GLCR L++A FRS KG D++ Y T+IS LC++ +A L M+E
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 427 GPDRYTY 433
P Y
Sbjct: 496 MPSERIY 502
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 208/436 (47%)
Query: 25 KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
K ++ L +M + +P+ + +++ K+ + + M D++++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 85 MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
+LI+ +C L A L +M L P +VT +L+N F + R EA L+D +D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
G PN V +N +I CK ++ A ++ ME+ G D VTYNTLI +G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
R++ M ++ + N I ++ T E L EA L +R + +Y +LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
+ A ++D M + P TYN +I G +S + E + + E+ G++ D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
T+NT+IHG+C G++ A + N+MV+ PDIVT NILL LC G +EKAL
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
VD +TYN +I LC+ +L++A+ L + K + PD Y + + L G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 445 RLEEAQKFTSIMVETG 460
EA K M E G
Sbjct: 479 LQREADKLCRRMKEDG 494
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 198/384 (51%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G D ++ ++ + +L+ LL M K G P+ T L++G+C+
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+EA+ +VD M +P+V YN +ING C L A + ME + D VTYNT
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ SGR +A +L+ ++ + I PN + +I + KEG + +A + + M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
P+ TYN+LI+ C G + +A M D+M KG + +T NT++ C K++++
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
L + +G D +Y TLI GY + K N A K+++ M + + P TYN ++ L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
+GK E+A+ M+ +L +S M D T+N II G C ++++A + K KPD
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 361 VTCNILLSGLCREGILEKALKFFR 384
+ ++SGLCR+G+ +A K R
Sbjct: 465 IAYITMISGLCRKGLQREADKLCR 488
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 161/294 (54%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
ME G D VTYNT++ L G+ + LL DM K+ + PN + L+ + K G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L EA + M + +P+V+TYN LING+C G L +A + M S PDVVTYNT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI F +S R + KL E+ G+ +A T+N +I YC+ GK++ A K+ M + G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
SPD VTYN L+D C G +E+A M++ + + + ++ IT N I+ LC KL EA+
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
L S +++G D ++Y T+I+G R A KL MKE MPS Y+
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 217/444 (48%), Gaps = 19/444 (4%)
Query: 96 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
++AF L EM + +P +V + ++ + + L +++ GI + + I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
+I +C+ ++ A ++ M + GF P VT +L++ C+ +EA ++D M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
N + NT+++ LC + L+ A + K+G D V+Y TLI+G + A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
+L +M +R+I P+ + A+I + G +A ++ E+++ ++P+ T+N++I+GF
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
C G + A + MV K PD+VT N L++G C+ +E +K F +G D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
TYNTLI C+ +L A + + M + + PD TY + L +G++E+A +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL----V 415
Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
MVE + E+D I+Y+ I C + K+A +F +KG+
Sbjct: 416 MVEDLQ-------------KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 516 NKSTYMNLMNGLIKRRKSISKAVD 539
+ Y+ +++GL RK + + D
Sbjct: 463 DAIAYITMISGLC--RKGLQREAD 484
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 177/358 (49%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M G P VT ++L+ + + E L+ M G VPN YN +++G CK
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L A+ V M + D TYN LI+G N+G +A RL ++M K+ P+V+ +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ F + G +EA L E+ + PN T+N +I +C G + A + M G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
PD VTYNTLI CK+ +E+ ++ M +GL + T NT++H C KL+ A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+ N G D V+Y L+ + K +AL + +++++ ++ TYN +I GL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
++ K ++A + L + G+ PD + T+I G C +G +A + +M E F P
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 170/329 (51%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+GFG +P+ V YNT+++ L K LN ++ M+K+G+ + TYN L+SG G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
+A R++ M + K P+V + LI+ + G L EA L KEM ++P+V TYN+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LIN F G +A + D + G P+ VT+N +I +CK +++ K+ M G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
D TYNTLI C+AG + A ++ + M G+ + +T N +L LC K+++A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
+++ K +D ++Y +I G R +K A L+ + + + P Y MI GL
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
+ G +A + + + G +P E ++
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 18/386 (4%)
Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
K D A + M ++ P V + ++ K + + M G+ + +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
++H C +L A LL K G+ V+ G+L+ G+ + + A+ L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
+P+ YN +I GL ++ A+++ + + G+ D T+NT+I G + G+ A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
+ MV++ P+++ L+ +EG L +A ++ I + + TYN+LI+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN- 463
C L DA + M K PD TY + T +S R+E+ K M G +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 464 --------HQVVQPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQIFE 506
H Q ++ + P ++Y+ ++ C+ G+ + AL + E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
+ ++ + ++ TY ++ GL + K
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDK 444
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G PD VTYN +LD L GK+ + ++ D++K + + TYNI++ G C+ LKEA
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
+ +T+ PD Y +I+G C G+ EA +L + M+ +P Y+ +
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 508
Query: 125 FFES 128
+ S
Sbjct: 509 HYTS 512
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 257/521 (49%), Gaps = 19/521 (3%)
Query: 11 VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
V+ + +L+ + K +L+ M K+G N +NIL+ G C+ +A+ ++
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 71 MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
M +N +PDV++YN +I G+C LE+A L EM+ +VT+ LI+ F ++G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
EA + E+ G++ + V + +I+ +C G++D+ + + E G SP +TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
LI CK G ++EA + + M +G++ N T ++ LC K EA LLN ++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
+ V+Y +I +D A+++ + MK+R+ P TYN ++ GL G ++A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 311 DMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
+L +L+ S PD ++N +IHG C E ++ +AL ++ +VEK D VT NILL+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
+ G + KA++ ++ +S TY +I CK L A GLL +M +L P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
+ Y + ++L + G L++A + M P +S++
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-----------------PDVVSFNIM 570
Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
I+ G K A + + G++ + TY L+N +K
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 232/456 (50%), Gaps = 2/456 (0%)
Query: 7 LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
+PD +YNT++ + +L + +L ++MK G + T+ IL+ +CK G + EAM
Sbjct: 174 MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 67 VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
+ M D+ Y LI G+C+ G L+ L E+ P +TYNTLI F
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
+ G+ EA ++ + + E G++PN T+ +I C GK +A +++ M E P+ V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
TYN +I+ CK G + +A ++++M ++ + + IT N +L LC + LDEA LL
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 247 SKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
K Y D +SY LI G ++ + ++AL ++D + E+ T N ++ ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
+A+++ ++ S ++ + T+ +I GFC G + A KM +P + N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
LLS LC+EG L++A + F D V++N +I K ++ A LL M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
L PD +TY+ + ++ G L+EA F MV++G
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 234/460 (50%), Gaps = 2/460 (0%)
Query: 1 MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
M+G GC VT+ ++DA K GK++E L +MK GL + Y L+ G+C G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 61 LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
L + D + + P TYN LI G+C G L+EA + + M + P+V TY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
LI+ G++ EA +L++ + E +PNAVT+NI+I CK+G + A +IV M++
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDE 238
PD +TYN L+ C G+++EA +++ +M + + I+ N ++H LC E +L +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
A + + ++ D V+ L+ + N+A++LW ++ + +I+ ++ TY AMI
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
G ++G A +L ++ S + P +N ++ C EG +++A + +M + P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
D+V+ NI++ G + G ++ A G + D TY+ LI+ K L++A
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
+M + PD + ++ + G ++ + +V+
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 208/435 (47%), Gaps = 19/435 (4%)
Query: 97 EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
E AF ++M + V+ + L+ + + ++ AF ++ + + G N HNI+
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
+K C+ + KA ++R M N PD +YNT+I C+ +E+A + + M G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
+ +T ++ C K+DEA L G D V Y +LI G+ + +R
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
L+DE+ ER P TYN +I G + G+ ++A ++ +++ G+ P+ T+ +I G C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
G+ ++ALQ N M+EK +P+ VT NI+++ LC++G++ A++ + D++
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 397 TYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
TYN L+ LC + L++A LL M + PD +Y A+ L + RL +A
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
++VE +V + + +N G A++++++ I
Sbjct: 449 LLVEKLGAGDRV-----------------TTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 515 INKSTYMNLMNGLIK 529
N TY +++G K
Sbjct: 492 RNSDTYTAMIDGFCK 506
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 186/365 (50%), Gaps = 3/365 (0%)
Query: 5 GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
G P+ TY ++D L GK E LL+ M ++ PN TYNI+++ CK G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 65 MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
+ +V+LM + ++ PD TYN+L+ G C G L+EA +L M +S PDV++YN LI
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
+ + R +A + D L E + VT NI++ K G ++KA ++ + + ++
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
+ TY +ID CK G + A ++ M L+ + N +L +LC E LD+A+ L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
+ + D VS+ +I G + A L M + P FTY+ +I +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-V 361
G ++AI ++++ SG PD ++++ S+G+ +K + K+V+K D +
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Query: 362 TCNIL 366
TC ++
Sbjct: 672 TCTVM 676
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 45/320 (14%)
Query: 8 PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWLKEAM 65
PDN+TYN +L L KG L+E LL M K P+ +YN L+ G CK L +A+
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 66 RVVDLMTQ-----------------------NKSLPDVW-------------TYNMLING 89
+ DL+ + NK++ ++W TY +I+G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDSKIVRNSDTYTAMIDG 503
Query: 90 WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
+C GML A L +M +L P V YN L++ + G +A++L +E+ P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
V+ NIMI K G I A ++ M G SPD TY+ LI+ K G ++EA D
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
M G + + +++L + + D+ L+ + LD+ T + Y +
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT-VMDYMCNS 682
Query: 270 KAN-----RALKLWDEMKER 284
AN R L++ D+ +ER
Sbjct: 683 SANMDLAKRLLRVTDDKEER 702
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,007,596
Number of Sequences: 539616
Number of extensions: 8119880
Number of successful extensions: 37481
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 22785
Number of HSP's gapped (non-prelim): 3804
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)